Attachment 1443175 Details for Bug 1555578 – build.log

build.log

build.log (text/plain), 13.94 KB, created by Fedora Release Engineering on 2018-05-28 12:08:23 UTC

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Creator: Fedora Release Engineering

Created: 2018-05-28 12:08:23 UTC

Size: 13.94 KB

patch

obsolete

>Mock Version: 1.3.4
>Mock Version: 1.3.4
>ENTER ['do'](['bash', '--login', '-c', '/usr/bin/rpmbuild -bs --target ppc64 --nodeps /builddir/build/SPECS/Ray.spec'], chrootPath='/var/lib/mock/f29-build-12557210-918120/root'env={'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;<mock-chroot>\\007"', 'PS1': '<mock-chroot> \\s-\\v\\$ ', 'LANG': 'en_US.UTF-8'}shell=Falselogger=<mockbuild.trace_decorator.getLog object at 0x7fffb3cc8668>timeout=172800uid=1000gid=425user='mockbuild'nspawn_args=[]printOutput=False)
>Executing command: ['bash', '--login', '-c', '/usr/bin/rpmbuild -bs --target ppc64 --nodeps /builddir/build/SPECS/Ray.spec'] with env {'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;<mock-chroot>\\007"', 'PS1': '<mock-chroot> \\s-\\v\\$ ', 'LANG': 'en_US.UTF-8'} and shell False
>Building target platforms: ppc64
>Building for target ppc64
>Wrote: /builddir/build/SRPMS/Ray-2.3.1-19.fc29.src.rpm
>Child return code was: 0
>ENTER ['do'](['bash', '--login', '-c', '/usr/bin/rpmbuild -bb --target ppc64 --nodeps /builddir/build/SPECS/Ray.spec'], chrootPath='/var/lib/mock/f29-build-12557210-918120/root'env={'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;<mock-chroot>\\007"', 'PS1': '<mock-chroot> \\s-\\v\\$ ', 'LANG': 'en_US.UTF-8'}shell=Falselogger=<mockbuild.trace_decorator.getLog object at 0x7fffb3cc8668>timeout=172800uid=1000gid=425user='mockbuild'nspawn_args=[]printOutput=False)
>Executing command: ['bash', '--login', '-c', '/usr/bin/rpmbuild -bb --target ppc64 --nodeps /builddir/build/SPECS/Ray.spec'] with env {'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;<mock-chroot>\\007"', 'PS1': '<mock-chroot> \\s-\\v\\$ ', 'LANG': 'en_US.UTF-8'} and shell False
>Building target platforms: ppc64
>Building for target ppc64
>Executing(%prep): /bin/sh -e /var/tmp/rpm-tmp.zdkvdD
>+ umask 022
>+ cd /builddir/build/BUILD
>+ cd /builddir/build/BUILD
>+ rm -rf Ray-2.3.1
>+ /usr/bin/bzip2 -dc /builddir/build/SOURCES/Ray-2.3.1.tar.bz2
>+ /usr/bin/tar -xof -
>+ STATUS=0
>+ '[' 0 -ne 0 ']'
>+ cd Ray-2.3.1
>+ /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w .
>Patch #0 (Ray.manpage.patch):
>+ echo 'Patch #0 (Ray.manpage.patch):'
>+ /usr/bin/patch --no-backup-if-mismatch -p0 --fuzz=0
>patching file Ray.1
>Patch #1 (pthread.patch):
>+ echo 'Patch #1 (pthread.patch):'
>+ /usr/bin/patch --no-backup-if-mismatch -p0 --fuzz=0
>patching file Makefile
>+ exit 0
>Executing(%build): /bin/sh -e /var/tmp/rpm-tmp.iSdZcJ
>+ umask 022
>+ cd /builddir/build/BUILD
>+ cd Ray-2.3.1
>+ CXXFLAGS='-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -fasynchronous-unwind-tables -fstack-clash-protection'
>+ . /etc/profile.d/modules.sh
>++ '[' -z '' ']'
>++ '[' -z /usr/share/modulefiles ']'
>++ PS_CMD=/usr/bin/ps
>++ '[' '!' -x /usr/bin/ps ']'
>++ EXPR_CMD=/usr/bin/expr
>++ '[' '!' -x /usr/bin/expr ']'
>++ BASENAME_CMD=/usr/bin/basename
>++ '[' '!' -x /usr/bin/basename ']'
>+++ /usr/bin/ps -p 9248 -ocomm=
>++ my_shell=sh
>+++ /usr/bin/expr sh : '-*$.*$'
>++ my_shell=sh
>+++ /usr/bin/basename sh
>++ my_shell=sh
>++ '[' -f /usr/share/lmod/lmod/init/sh ']'
>++ . /usr/share/lmod/lmod/init/sh
>+++ LMOD_PKG=/usr/share/lmod/lmod
>+++ LMOD_DIR=/usr/share/lmod/lmod/libexec/
>+++ LMOD_CMD=/usr/share/lmod/lmod/libexec/lmod
>+++ MODULESHOME=/usr/share/lmod/lmod
>+++ export LMOD_CMD
>+++ export LMOD_PKG
>+++ export LMOD_DIR
>+++ export MODULESHOME
>+++ export LMOD_DIR
>++ unset my_shell PS_CMD EXPR_CMD BASENAME_CMD MODULEPATH_INIT
>+ module load mpi/openmpi-ppc64
>++ /usr/share/lmod/lmod/libexec/lmod sh load mpi/openmpi-ppc64
>+ eval '__LMOD_REF_COUNT_LD_LIBRARY_PATH="/usr/lib64/openmpi/lib:1";' export '__LMOD_REF_COUNT_LD_LIBRARY_PATH;' 'LD_LIBRARY_PATH="/usr/lib64/openmpi/lib";' export 'LD_LIBRARY_PATH;' '__LMOD_REF_COUNT_LOADEDMODULES="mpi/openmpi-ppc64:1";' export '__LMOD_REF_COUNT_LOADEDMODULES;' 'LOADEDMODULES="mpi/openmpi-ppc64";' export 'LOADEDMODULES;' '__LMOD_REF_COUNT_MANPATH="/usr/share/man/openmpi-ppc64:1;/usr/share/lmod/lmod/share/man:1";' export '__LMOD_REF_COUNT_MANPATH;' 'MANPATH="/usr/share/man/openmpi-ppc64:/usr/share/lmod/lmod/share/man::";' export 'MANPATH;' '__LMOD_REF_COUNT_MODULEPATH="/etc/modulefiles:1;/usr/share/modulefiles:1;/usr/share/modulefiles/Linux:1;/usr/share/modulefiles/Core:1;/usr/share/lmod/lmod/modulefiles/Core:1";' export '__LMOD_REF_COUNT_MODULEPATH;' 'MODULEPATH="/etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core";' export 'MODULEPATH;' 'MPI_BIN="/usr/lib64/openmpi/bin";' export 'MPI_BIN;' 'MPI_COMPILER="openmpi-ppc64";' export 'MPI_COMPILER;' 'MPI_FORTRAN_MOD_DIR="/usr/lib64/gfortran/modules/openmpi";' export 'MPI_FORTRAN_MOD_DIR;' 'MPI_HOME="/usr/lib64/openmpi";' export 'MPI_HOME;' 'MPI_INCLUDE="/usr/include/openmpi-ppc64";' export 'MPI_INCLUDE;' 'MPI_LIB="/usr/lib64/openmpi/lib";' export 'MPI_LIB;' 'MPI_MAN="/usr/share/man/openmpi-ppc64";' export 'MPI_MAN;' 'MPI_PYTHON2_SITEARCH="/usr/lib64/python2.7/site-packages/openmpi";' export 'MPI_PYTHON2_SITEARCH;' 'MPI_PYTHON3_SITEARCH="/usr/lib64/python3.6/site-packages/openmpi";' export 'MPI_PYTHON3_SITEARCH;' 'MPI_PYTHON_SITEARCH="/usr/lib64/python2.7/site-packages/openmpi";' export 'MPI_PYTHON_SITEARCH;' 'MPI_SUFFIX="_openmpi";' export 'MPI_SUFFIX;' 'MPI_SYSCONFIG="/etc/openmpi-ppc64";' export 'MPI_SYSCONFIG;' '__LMOD_REF_COUNT_PATH="/usr/lib64/openmpi/bin:1;/usr/bin:1;/bin:1;/usr/sbin:1;/sbin:1;/usr/local/sbin:1";' export '__LMOD_REF_COUNT_PATH;' 'PATH="/usr/lib64/openmpi/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin";' export 'PATH;' '__LMOD_REF_COUNT_PKG_CONFIG_PATH="/usr/lib64/openmpi/lib/pkgconfig:1;/usr/lib64/pkgconfig:1;/usr/share/pkgconfig:1";' export '__LMOD_REF_COUNT_PKG_CONFIG_PATH;' 'PKG_CONFIG_PATH="/usr/lib64/openmpi/lib/pkgconfig::/usr/lib64/pkgconfig:/usr/share/pkgconfig";' export 'PKG_CONFIG_PATH;' '__LMOD_REF_COUNT__LMFILES_="/usr/share/modulefiles/mpi/openmpi-ppc64:1";' export '__LMOD_REF_COUNT__LMFILES_;' '_LMFILES_="/usr/share/modulefiles/mpi/openmpi-ppc64";' export '_LMFILES_;' '_ModuleTable001_="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";' export '_ModuleTable001_;' '_ModuleTable002_="b2R1bGVmaWxlcy9Db3JlIiwiL3Vzci9zaGFyZS9sbW9kL2xtb2QvbW9kdWxlZmlsZXMvQ29yZSIsfSxbInN5c3RlbUJhc2VNUEFUSCJdPSIvZXRjL21vZHVsZWZpbGVzOi91c3Ivc2hhcmUvbW9kdWxlZmlsZXM6L3Vzci9zaGFyZS9tb2R1bGVmaWxlcy9MaW51eDovdXNyL3NoYXJlL21vZHVsZWZpbGVzL0NvcmU6L3Vzci9zaGFyZS9sbW9kL2xtb2QvbW9kdWxlZmlsZXMvQ29yZSIsfQ==";' export '_ModuleTable002_;' '_ModuleTable_Sz_="2";' export '_ModuleTable_Sz_;'
>++ __LMOD_REF_COUNT_LD_LIBRARY_PATH=/usr/lib64/openmpi/lib:1
>++ export __LMOD_REF_COUNT_LD_LIBRARY_PATH
>++ LD_LIBRARY_PATH=/usr/lib64/openmpi/lib
>++ export LD_LIBRARY_PATH
>++ __LMOD_REF_COUNT_LOADEDMODULES=mpi/openmpi-ppc64:1
>++ export __LMOD_REF_COUNT_LOADEDMODULES
>++ LOADEDMODULES=mpi/openmpi-ppc64
>++ export LOADEDMODULES
>++ __LMOD_REF_COUNT_MANPATH='/usr/share/man/openmpi-ppc64:1;/usr/share/lmod/lmod/share/man:1'
>++ export __LMOD_REF_COUNT_MANPATH
>++ MANPATH=/usr/share/man/openmpi-ppc64:/usr/share/lmod/lmod/share/man::
>++ export MANPATH
>++ __LMOD_REF_COUNT_MODULEPATH='/etc/modulefiles:1;/usr/share/modulefiles:1;/usr/share/modulefiles/Linux:1;/usr/share/modulefiles/Core:1;/usr/share/lmod/lmod/modulefiles/Core:1'
>++ export __LMOD_REF_COUNT_MODULEPATH
>++ MODULEPATH=/etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core
>++ export MODULEPATH
>++ MPI_BIN=/usr/lib64/openmpi/bin
>++ export MPI_BIN
>++ MPI_COMPILER=openmpi-ppc64
>++ export MPI_COMPILER
>++ MPI_FORTRAN_MOD_DIR=/usr/lib64/gfortran/modules/openmpi
>++ export MPI_FORTRAN_MOD_DIR
>++ MPI_HOME=/usr/lib64/openmpi
>++ export MPI_HOME
>++ MPI_INCLUDE=/usr/include/openmpi-ppc64
>++ export MPI_INCLUDE
>++ MPI_LIB=/usr/lib64/openmpi/lib
>++ export MPI_LIB
>++ MPI_MAN=/usr/share/man/openmpi-ppc64
>++ export MPI_MAN
>++ MPI_PYTHON2_SITEARCH=/usr/lib64/python2.7/site-packages/openmpi
>++ export MPI_PYTHON2_SITEARCH
>++ MPI_PYTHON3_SITEARCH=/usr/lib64/python3.6/site-packages/openmpi
>++ export MPI_PYTHON3_SITEARCH
>++ MPI_PYTHON_SITEARCH=/usr/lib64/python2.7/site-packages/openmpi
>++ export MPI_PYTHON_SITEARCH
>++ MPI_SUFFIX=_openmpi
>++ export MPI_SUFFIX
>++ MPI_SYSCONFIG=/etc/openmpi-ppc64
>++ export MPI_SYSCONFIG
>++ __LMOD_REF_COUNT_PATH='/usr/lib64/openmpi/bin:1;/usr/bin:1;/bin:1;/usr/sbin:1;/sbin:1;/usr/local/sbin:1'
>++ export __LMOD_REF_COUNT_PATH
>++ PATH=/usr/lib64/openmpi/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin
>++ export PATH
>++ __LMOD_REF_COUNT_PKG_CONFIG_PATH='/usr/lib64/openmpi/lib/pkgconfig:1;/usr/lib64/pkgconfig:1;/usr/share/pkgconfig:1'
>++ export __LMOD_REF_COUNT_PKG_CONFIG_PATH
>++ PKG_CONFIG_PATH=/usr/lib64/openmpi/lib/pkgconfig::/usr/lib64/pkgconfig:/usr/share/pkgconfig
>++ export PKG_CONFIG_PATH
>++ __LMOD_REF_COUNT__LMFILES_=/usr/share/modulefiles/mpi/openmpi-ppc64:1
>++ export __LMOD_REF_COUNT__LMFILES_
>++ _LMFILES_=/usr/share/modulefiles/mpi/openmpi-ppc64
>++ export _LMFILES_
>++ _ModuleTable001_=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
>++ export _ModuleTable001_
>++ _ModuleTable002_=b2R1bGVmaWxlcy9Db3JlIiwiL3Vzci9zaGFyZS9sbW9kL2xtb2QvbW9kdWxlZmlsZXMvQ29yZSIsfSxbInN5c3RlbUJhc2VNUEFUSCJdPSIvZXRjL21vZHVsZWZpbGVzOi91c3Ivc2hhcmUvbW9kdWxlZmlsZXM6L3Vzci9zaGFyZS9tb2R1bGVmaWxlcy9MaW51eDovdXNyL3NoYXJlL21vZHVsZWZpbGVzL0NvcmU6L3Vzci9zaGFyZS9sbW9kL2xtb2QvbW9kdWxlZmlsZXMvQ29yZSIsfQ==
>++ export _ModuleTable002_
>++ _ModuleTable_Sz_=2
>++ export _ModuleTable_Sz_
>+ make 'CXXFLAGS=-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -fasynchronous-unwind-tables -fstack-clash-protection' HAVE_LIBBZ2=y HAVE_LIBZ=y Q=
>echo "  CXX code/application_core/ray_main.o"
>  CXX code/application_core/ray_main.o
>mpicxx -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -fasynchronous-unwind-tables -fstack-clash-protection  -D CONFIG_MAXKMERLENGTH=32 -D CONFIG_HAVE_LIBZ -D CONFIG_HAVE_LIBBZ2 -D CONFIG_RAY_VERSION=\"2.3.1\" -I. -IRayPlatform -c code/application_core/ray_main.cpp -o code/application_core/ray_main.o
>echo "  CXX code/GeneOntology/KeyEncoder.o"
>  CXX code/GeneOntology/KeyEncoder.o
>mpicxx -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -fasynchronous-unwind-tables -fstack-clash-protection  -D CONFIG_MAXKMERLENGTH=32 -D CONFIG_HAVE_LIBZ -D CONFIG_HAVE_LIBBZ2 -D CONFIG_RAY_VERSION=\"2.3.1\" -I. -IRayPlatform -c code/GeneOntology/KeyEncoder.cpp -o code/GeneOntology/KeyEncoder.o
>echo "  CXX code/GeneOntology/GeneOntology.o"
>  CXX code/GeneOntology/GeneOntology.o
>mpicxx -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -fasynchronous-unwind-tables -fstack-clash-protection  -D CONFIG_MAXKMERLENGTH=32 -D CONFIG_HAVE_LIBZ -D CONFIG_HAVE_LIBBZ2 -D CONFIG_RAY_VERSION=\"2.3.1\" -I. -IRayPlatform -c code/GeneOntology/GeneOntology.cpp -o code/GeneOntology/GeneOntology.o
>code/GeneOntology/GeneOntology.cpp: In member function 'bool GeneOntology::fetchArguments()':
>code/GeneOntology/GeneOntology.cpp:221:20: error: cannot convert 'std::ifstream' {aka 'std::basic_ifstream<char>'} to 'bool' in initialization
>   bool test1Result=test1;
>                    ^~~~~
>code/GeneOntology/GeneOntology.cpp:230:20: error: cannot convert 'std::ifstream' {aka 'std::basic_ifstream<char>'} to 'bool' in initialization
>   bool test2Result=test2;
>                    ^~~~~
>make: *** [Makefile:161: code/GeneOntology/GeneOntology.o] Error 1
>error: Bad exit status from /var/tmp/rpm-tmp.iSdZcJ (%build)
>RPM build errors:
>    Bad exit status from /var/tmp/rpm-tmp.iSdZcJ (%build)
>Child return code was: 1
>EXCEPTION: [Error()]
>Traceback (most recent call last):
>  File "/usr/lib/python3.6/site-packages/mockbuild/trace_decorator.py", line 89, in trace
>    result = func(*args, **kw)
>  File "/usr/lib/python3.6/site-packages/mockbuild/util.py", line 582, in do
>    raise exception.Error("Command failed. See logs for output.\n # %s" % (command,), child.returncode)
>mockbuild.exception.Error: Command failed. See logs for output.
> # bash --login -c /usr/bin/rpmbuild -bb --target ppc64 --nodeps /builddir/build/SPECS/Ray.spec

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Attachments on bug 1555578: 1443175 | 1443176 | 1443177