Attachment 1464442 Details for Bug 1604882 – build.log

build.log

build.log (text/plain), 32.00 KB, created by Mohan Boddu on 2018-07-20 00:57:37 UTC

(hide)

Description:

Filename:

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Creator: Mohan Boddu

Created: 2018-07-20 00:57:37 UTC

Size: 32.00 KB

patch

obsolete

>tection -DNDEBUG   -Wall -Wno-unused-variable -Wno-unused-function -fPIC -UDO_UNIT_TESTS -O3 -o CMakeFiles/kinetics.dir/lookupVolumeFromMesh.cpp.o -c /builddir/build/BUILD/moose-core-0e12e41b52deb8ea746bc760cddd6e100ca5cfd8/kinetics/lookupVolumeFromMesh.cpp
>make[2]: Leaving directory '/builddir/build/BUILD/moose-core-0e12e41b52deb8ea746bc760cddd6e100ca5cfd8/build3'
>make[2]: Entering directory '/builddir/build/BUILD/moose-core-0e12e41b52deb8ea746bc760cddd6e100ca5cfd8/build3'
>[ 94%] Building CXX object pymoose/CMakeFiles/moosepython.dir/mfield.cpp.o
>cd /builddir/build/BUILD/moose-core-0e12e41b52deb8ea746bc760cddd6e100ca5cfd8/build3/pymoose && /usr/bin/c++  -DNPY_NO_DEPRECATED_API=NPY_1_7_API_VERSION -DPYMOOSE -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -DUSE_NUMPY -DUSE_SBML -I/usr/include/libxml2 -I/builddir/build/BUILD/moose-core-0e12e41b52deb8ea746bc760cddd6e100ca5cfd8/msg -I/builddir/build/BUILD/moose-core-0e12e41b52deb8ea746bc760cddd6e100ca5cfd8/basecode -I/usr/include/python3.7m -I/builddir/build/BUILD/moose-core-0e12e41b52deb8ea746bc760cddd6e100ca5cfd8/pymoose/../basecode -I/builddir/build/BUILD/moose-core-0e12e41b52deb8ea746bc760cddd6e100ca5cfd8/pymoose/../msg -I/usr/lib64/python3.7/site-packages/numpy/core/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=zEC12 -mtune=z13 -fasynchronous-unwind-tables -fstack-clash-protection -DNDEBUG   -Wall -Wno-unused-variable -Wno-unused-function -fPIC -UDO_UNIT_TESTS -O3 -o CMakeFiles/moosepython.dir/mfield.cpp.o -c /builddir/build/BUILD/moose-core-0e12e41b52deb8ea746bc760cddd6e100ca5cfd8/pymoose/mfield.cpp
>make[2]: Leaving directory '/builddir/build/BUILD/moose-core-0e12e41b52deb8ea746bc760cddd6e100ca5cfd8/build3'
>make[2]: Entering directory '/builddir/build/BUILD/moose-core-0e12e41b52deb8ea746bc760cddd6e100ca5cfd8/build3'
>[ 96%] Building CXX object pymoose/CMakeFiles/moosepython.dir/pymooseinit.cpp.o
>cd /builddir/build/BUILD/moose-core-0e12e41b52deb8ea746bc760cddd6e100ca5cfd8/build3/pymoose && /usr/bin/c++  -DNPY_NO_DEPRECATED_API=NPY_1_7_API_VERSION -DPYMOOSE -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -DUSE_NUMPY -DUSE_SBML -I/usr/include/libxml2 -I/builddir/build/BUILD/moose-core-0e12e41b52deb8ea746bc760cddd6e100ca5cfd8/msg -I/builddir/build/BUILD/moose-core-0e12e41b52deb8ea746bc760cddd6e100ca5cfd8/basecode -I/usr/include/python3.7m -I/builddir/build/BUILD/moose-core-0e12e41b52deb8ea746bc760cddd6e100ca5cfd8/pymoose/../basecode -I/builddir/build/BUILD/moose-core-0e12e41b52deb8ea746bc760cddd6e100ca5cfd8/pymoose/../msg -I/usr/lib64/python3.7/site-packages/numpy/core/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=zEC12 -mtune=z13 -fasynchronous-unwind-tables -fstack-clash-protection -DNDEBUG   -Wall -Wno-unused-variable -Wno-unused-function -fPIC -UDO_UNIT_TESTS -O3 -o CMakeFiles/moosepython.dir/pymooseinit.cpp.o -c /builddir/build/BUILD/moose-core-0e12e41b52deb8ea746bc760cddd6e100ca5cfd8/pymoose/pymooseinit.cpp
>make[2]: Leaving directory '/builddir/build/BUILD/moose-core-0e12e41b52deb8ea746bc760cddd6e100ca5cfd8/build3'
>make[2]: Entering directory '/builddir/build/BUILD/moose-core-0e12e41b52deb8ea746bc760cddd6e100ca5cfd8/build3'
>[ 95%] Building CXX object kinetics/CMakeFiles/kinetics.dir/testKinetics.cpp.o
>cd /builddir/build/BUILD/moose-core-0e12e41b52deb8ea746bc760cddd6e100ca5cfd8/build3/kinetics && /usr/bin/c++  -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -DUSE_SBML -I/usr/include/libxml2 -I/builddir/build/BUILD/moose-core-0e12e41b52deb8ea746bc760cddd6e100ca5cfd8/msg -I/builddir/build/BUILD/moose-core-0e12e41b52deb8ea746bc760cddd6e100ca5cfd8/basecode -I/builddir/build/BUILD/moose-core-0e12e41b52deb8ea746bc760cddd6e100ca5cfd8/kinetics/../msg -I/builddir/build/BUILD/moose-core-0e12e41b52deb8ea746bc760cddd6e100ca5cfd8/kinetics/../basecode -I/builddir/build/BUILD/moose-core-0e12e41b52deb8ea746bc760cddd6e100ca5cfd8/kinetics/../utility  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=zEC12 -mtune=z13 -fasynchronous-unwind-tables -fstack-clash-protection -DNDEBUG   -Wall -Wno-unused-variable -Wno-unused-function -fPIC -UDO_UNIT_TESTS -O3 -o CMakeFiles/kinetics.dir/testKinetics.cpp.o -c /builddir/build/BUILD/moose-core-0e12e41b52deb8ea746bc760cddd6e100ca5cfd8/kinetics/testKinetics.cpp
>/builddir/build/BUILD/moose-core-0e12e41b52deb8ea746bc760cddd6e100ca5cfd8/kinetics/testKinetics.cpp: In function 'void testPoolVolumeScaling()':
>/builddir/build/BUILD/moose-core-0e12e41b52deb8ea746bc760cddd6e100ca5cfd8/kinetics/testKinetics.cpp:73:9: warning: variable 'n' set but not used [-Wunused-but-set-variable]
>  double n = Field< double >::get( poolId, "n" );
>         ^
>/builddir/build/BUILD/moose-core-0e12e41b52deb8ea746bc760cddd6e100ca5cfd8/kinetics/testKinetics.cpp: In function 'void testReacVolumeScaling()':
>/builddir/build/BUILD/moose-core-0e12e41b52deb8ea746bc760cddd6e100ca5cfd8/kinetics/testKinetics.cpp:120:9: warning: variable 'x' set but not used [-Wunused-but-set-variable]
>  double x = Field< double >::get( reacId, "kf" );
>         ^
>/builddir/build/BUILD/moose-core-0e12e41b52deb8ea746bc760cddd6e100ca5cfd8/kinetics/testKinetics.cpp: In function 'void testTwoReacGetNeighbors()':
>/builddir/build/BUILD/moose-core-0e12e41b52deb8ea746bc760cddd6e100ca5cfd8/kinetics/testKinetics.cpp:172:15: warning: variable 'num' set but not used [-Wunused-but-set-variable]
>  unsigned int num = reacId.element()->getNeighbors( pools,
>               ^~~
>make[2]: Leaving directory '/builddir/build/BUILD/moose-core-0e12e41b52deb8ea746bc760cddd6e100ca5cfd8/build3'
>make[2]: Entering directory '/builddir/build/BUILD/moose-core-0e12e41b52deb8ea746bc760cddd6e100ca5cfd8/build3'
>[ 97%] Linking CXX static library libkinetics.a
>cd /builddir/build/BUILD/moose-core-0e12e41b52deb8ea746bc760cddd6e100ca5cfd8/build3/kinetics && /usr/bin/cmake -P CMakeFiles/kinetics.dir/cmake_clean_target.cmake
>cd /builddir/build/BUILD/moose-core-0e12e41b52deb8ea746bc760cddd6e100ca5cfd8/build3/kinetics && /usr/bin/cmake -E cmake_link_script CMakeFiles/kinetics.dir/link.txt --verbose=1
>/usr/bin/ar qc libkinetics.a  CMakeFiles/kinetics.dir/PoolBase.cpp.o CMakeFiles/kinetics.dir/Pool.cpp.o CMakeFiles/kinetics.dir/BufPool.cpp.o CMakeFiles/kinetics.dir/ReacBase.cpp.o CMakeFiles/kinetics.dir/Reac.cpp.o CMakeFiles/kinetics.dir/EnzBase.cpp.o CMakeFiles/kinetics.dir/CplxEnzBase.cpp.o CMakeFiles/kinetics.dir/Enz.cpp.o CMakeFiles/kinetics.dir/MMenz.cpp.o CMakeFiles/kinetics.dir/Species.cpp.o CMakeFiles/kinetics.dir/ReadKkit.cpp.o CMakeFiles/kinetics.dir/WriteKkit.cpp.o CMakeFiles/kinetics.dir/ReadCspace.cpp.o CMakeFiles/kinetics.dir/lookupVolumeFromMesh.cpp.o CMakeFiles/kinetics.dir/testKinetics.cpp.o
>/usr/bin/ranlib libkinetics.a
>make[2]: Leaving directory '/builddir/build/BUILD/moose-core-0e12e41b52deb8ea746bc760cddd6e100ca5cfd8/build3'
>make[1]: Entering directory '/builddir/build/BUILD/moose-core-0e12e41b52deb8ea746bc760cddd6e100ca5cfd8/build3'
>[ 97%] Built target kinetics
>make[1]: Leaving directory '/builddir/build/BUILD/moose-core-0e12e41b52deb8ea746bc760cddd6e100ca5cfd8/build3'
>/usr/bin/make -f CMakeFiles/copy_python_files.dir/build.make CMakeFiles/copy_python_files.dir/depend
>make[2]: Entering directory '/builddir/build/BUILD/moose-core-0e12e41b52deb8ea746bc760cddd6e100ca5cfd8/build3'
>cd /builddir/build/BUILD/moose-core-0e12e41b52deb8ea746bc760cddd6e100ca5cfd8/build3 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/moose-core-0e12e41b52deb8ea746bc760cddd6e100ca5cfd8 /builddir/build/BUILD/moose-core-0e12e41b52deb8ea746bc760cddd6e100ca5cfd8 /builddir/build/BUILD/moose-core-0e12e41b52deb8ea746bc760cddd6e100ca5cfd8/build3 /builddir/build/BUILD/moose-core-0e12e41b52deb8ea746bc760cddd6e100ca5cfd8/build3 /builddir/build/BUILD/moose-core-0e12e41b52deb8ea746bc760cddd6e100ca5cfd8/build3/CMakeFiles/copy_python_files.dir/DependInfo.cmake --color=
>Scanning dependencies of target copy_python_files
>make[2]: Leaving directory '/builddir/build/BUILD/moose-core-0e12e41b52deb8ea746bc760cddd6e100ca5cfd8/build3'
>/usr/bin/make -f CMakeFiles/copy_python_files.dir/build.make CMakeFiles/copy_python_files.dir/build
>make[2]: Entering directory '/builddir/build/BUILD/moose-core-0e12e41b52deb8ea746bc760cddd6e100ca5cfd8/build3'
>[ 98%] Copying python files to build directory
>/usr/bin/cmake -E copy_directory /builddir/build/BUILD/moose-core-0e12e41b52deb8ea746bc760cddd6e100ca5cfd8/python /builddir/build/BUILD/moose-core-0e12e41b52deb8ea746bc760cddd6e100ca5cfd8/build3/python
>make[2]: Leaving directory '/builddir/build/BUILD/moose-core-0e12e41b52deb8ea746bc760cddd6e100ca5cfd8/build3'
>make[1]: Entering directory '/builddir/build/BUILD/moose-core-0e12e41b52deb8ea746bc760cddd6e100ca5cfd8/build3'
>[ 98%] Built target copy_python_files
>make[1]: Leaving directory '/builddir/build/BUILD/moose-core-0e12e41b52deb8ea746bc760cddd6e100ca5cfd8/build3'
>/usr/bin/make -f examples/CMakeFiles/examples.dir/build.make examples/CMakeFiles/examples.dir/depend
>make[2]: Entering directory '/builddir/build/BUILD/moose-core-0e12e41b52deb8ea746bc760cddd6e100ca5cfd8/build3'
>cd /builddir/build/BUILD/moose-core-0e12e41b52deb8ea746bc760cddd6e100ca5cfd8/build3 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/moose-core-0e12e41b52deb8ea746bc760cddd6e100ca5cfd8 /builddir/build/BUILD/moose-core-0e12e41b52deb8ea746bc760cddd6e100ca5cfd8/examples /builddir/build/BUILD/moose-core-0e12e41b52deb8ea746bc760cddd6e100ca5cfd8/build3 /builddir/build/BUILD/moose-core-0e12e41b52deb8ea746bc760cddd6e100ca5cfd8/build3/examples /builddir/build/BUILD/moose-core-0e12e41b52deb8ea746bc760cddd6e100ca5cfd8/build3/examples/CMakeFiles/examples.dir/DependInfo.cmake --color=
>Scanning dependencies of target examples
>make[2]: Leaving directory '/builddir/build/BUILD/moose-core-0e12e41b52deb8ea746bc760cddd6e100ca5cfd8/build3'
>/usr/bin/make -f examples/CMakeFiles/examples.dir/build.make examples/CMakeFiles/examples.dir/build
>make[2]: Entering directory '/builddir/build/BUILD/moose-core-0e12e41b52deb8ea746bc760cddd6e100ca5cfd8/build3'
>[ 98%] Building CXX object examples/CMakeFiles/examples.dir/Example.cpp.o
>cd /builddir/build/BUILD/moose-core-0e12e41b52deb8ea746bc760cddd6e100ca5cfd8/build3/examples && /usr/bin/c++  -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -DUSE_SBML -I/usr/include/libxml2 -I/builddir/build/BUILD/moose-core-0e12e41b52deb8ea746bc760cddd6e100ca5cfd8/msg -I/builddir/build/BUILD/moose-core-0e12e41b52deb8ea746bc760cddd6e100ca5cfd8/basecode -I/builddir/build/BUILD/moose-core-0e12e41b52deb8ea746bc760cddd6e100ca5cfd8/examples/../basecode  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=zEC12 -mtune=z13 -fasynchronous-unwind-tables -fstack-clash-protection -DNDEBUG   -Wall -Wno-unused-variable -Wno-unused-function -fPIC -UDO_UNIT_TESTS -O3 -o CMakeFiles/examples.dir/Example.cpp.o -c /builddir/build/BUILD/moose-core-0e12e41b52deb8ea746bc760cddd6e100ca5cfd8/examples/Example.cpp
>In file included from /builddir/build/BUILD/moose-core-0e12e41b52deb8ea746bc760cddd6e100ca5cfd8/examples/Example.cpp:2:
>/builddir/build/BUILD/moose-core-0e12e41b52deb8ea746bc760cddd6e100ca5cfd8/examples/Example.h: In constructor 'Example::Example()':
>/builddir/build/BUILD/moose-core-0e12e41b52deb8ea746bc760cddd6e100ca5cfd8/examples/Example.h:8:16: warning: 'Example::output_' will be initialized after [-Wreorder]
>         double output_;
>                ^~~~~~~
>/builddir/build/BUILD/moose-core-0e12e41b52deb8ea746bc760cddd6e100ca5cfd8/examples/Example.h:6:16: warning:   'double Example::x_' [-Wreorder]
>         double x_;
>                ^~
>/builddir/build/BUILD/moose-core-0e12e41b52deb8ea746bc760cddd6e100ca5cfd8/examples/Example.cpp:92:1: warning:   when initialized here [-Wreorder]
> Example::Example()
> ^~~~~~~
>make[2]: Leaving directory '/builddir/build/BUILD/moose-core-0e12e41b52deb8ea746bc760cddd6e100ca5cfd8/build3'
>make[2]: Entering directory '/builddir/build/BUILD/moose-core-0e12e41b52deb8ea746bc760cddd6e100ca5cfd8/build3'
>[ 99%] Building CXX object examples/CMakeFiles/examples.dir/Ex.cpp.o
>cd /builddir/build/BUILD/moose-core-0e12e41b52deb8ea746bc760cddd6e100ca5cfd8/build3/examples && /usr/bin/c++  -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -DUSE_SBML -I/usr/include/libxml2 -I/builddir/build/BUILD/moose-core-0e12e41b52deb8ea746bc760cddd6e100ca5cfd8/msg -I/builddir/build/BUILD/moose-core-0e12e41b52deb8ea746bc760cddd6e100ca5cfd8/basecode -I/builddir/build/BUILD/moose-core-0e12e41b52deb8ea746bc760cddd6e100ca5cfd8/examples/../basecode  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=zEC12 -mtune=z13 -fasynchronous-unwind-tables -fstack-clash-protection -DNDEBUG   -Wall -Wno-unused-variable -Wno-unused-function -fPIC -UDO_UNIT_TESTS -O3 -o CMakeFiles/examples.dir/Ex.cpp.o -c /builddir/build/BUILD/moose-core-0e12e41b52deb8ea746bc760cddd6e100ca5cfd8/examples/Ex.cpp
>make[2]: Leaving directory '/builddir/build/BUILD/moose-core-0e12e41b52deb8ea746bc760cddd6e100ca5cfd8/build3'
>make[2]: Entering directory '/builddir/build/BUILD/moose-core-0e12e41b52deb8ea746bc760cddd6e100ca5cfd8/build3'
>[ 99%] Linking CXX static library libexamples.a
>cd /builddir/build/BUILD/moose-core-0e12e41b52deb8ea746bc760cddd6e100ca5cfd8/build3/examples && /usr/bin/cmake -P CMakeFiles/examples.dir/cmake_clean_target.cmake
>cd /builddir/build/BUILD/moose-core-0e12e41b52deb8ea746bc760cddd6e100ca5cfd8/build3/examples && /usr/bin/cmake -E cmake_link_script CMakeFiles/examples.dir/link.txt --verbose=1
>/usr/bin/ar qc libexamples.a  CMakeFiles/examples.dir/Example.cpp.o CMakeFiles/examples.dir/Ex.cpp.o
>/usr/bin/ranlib libexamples.a
>make[2]: Leaving directory '/builddir/build/BUILD/moose-core-0e12e41b52deb8ea746bc760cddd6e100ca5cfd8/build3'
>make[1]: Entering directory '/builddir/build/BUILD/moose-core-0e12e41b52deb8ea746bc760cddd6e100ca5cfd8/build3'
>[ 99%] Built target examples
>make[1]: Leaving directory '/builddir/build/BUILD/moose-core-0e12e41b52deb8ea746bc760cddd6e100ca5cfd8/build3'
>/usr/bin/make -f CMakeFiles/libmoose.dir/build.make CMakeFiles/libmoose.dir/depend
>make[2]: Entering directory '/builddir/build/BUILD/moose-core-0e12e41b52deb8ea746bc760cddd6e100ca5cfd8/build3'
>cd /builddir/build/BUILD/moose-core-0e12e41b52deb8ea746bc760cddd6e100ca5cfd8/build3 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/moose-core-0e12e41b52deb8ea746bc760cddd6e100ca5cfd8 /builddir/build/BUILD/moose-core-0e12e41b52deb8ea746bc760cddd6e100ca5cfd8 /builddir/build/BUILD/moose-core-0e12e41b52deb8ea746bc760cddd6e100ca5cfd8/build3 /builddir/build/BUILD/moose-core-0e12e41b52deb8ea746bc760cddd6e100ca5cfd8/build3 /builddir/build/BUILD/moose-core-0e12e41b52deb8ea746bc760cddd6e100ca5cfd8/build3/CMakeFiles/libmoose.dir/DependInfo.cmake --color=
>Scanning dependencies of target libmoose
>make[2]: Leaving directory '/builddir/build/BUILD/moose-core-0e12e41b52deb8ea746bc760cddd6e100ca5cfd8/build3'
>/usr/bin/make -f CMakeFiles/libmoose.dir/build.make CMakeFiles/libmoose.dir/build
>make[2]: Entering directory '/builddir/build/BUILD/moose-core-0e12e41b52deb8ea746bc760cddd6e100ca5cfd8/build3'
>[ 99%] Building CXX object CMakeFiles/libmoose.dir/basecode/main.cpp.o
>/usr/bin/c++  -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -DUSE_NUMPY -DUSE_SBML -I/usr/include/libxml2 -I/builddir/build/BUILD/moose-core-0e12e41b52deb8ea746bc760cddd6e100ca5cfd8/msg -I/builddir/build/BUILD/moose-core-0e12e41b52deb8ea746bc760cddd6e100ca5cfd8/basecode -I/usr/include/python3.7m -I/usr/lib64/python3.7/site-packages/numpy/core/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=zEC12 -mtune=z13 -fasynchronous-unwind-tables -fstack-clash-protection -DNDEBUG   -Wall -Wno-unused-variable -Wno-unused-function -fPIC -UDO_UNIT_TESTS -O3 -DMOOSE_LIB -o CMakeFiles/libmoose.dir/basecode/main.cpp.o -c /builddir/build/BUILD/moose-core-0e12e41b52deb8ea746bc760cddd6e100ca5cfd8/basecode/main.cpp
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>make[2]: Entering directory '/builddir/build/BUILD/moose-core-0e12e41b52deb8ea746bc760cddd6e100ca5cfd8/build3'
>[ 99%] Linking CXX static library libmoose.a
>/usr/bin/cmake -P CMakeFiles/libmoose.dir/cmake_clean_target.cmake
>/usr/bin/cmake -E cmake_link_script CMakeFiles/libmoose.dir/link.txt --verbose=1
>/usr/bin/ar qc libmoose.a  CMakeFiles/libmoose.dir/basecode/main.cpp.o
>/usr/bin/ranlib libmoose.a
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>[ 99%] Built target libmoose
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>/usr/bin/make -f CMakeFiles/moose.bin.dir/build.make CMakeFiles/moose.bin.dir/depend
>make[2]: Entering directory '/builddir/build/BUILD/moose-core-0e12e41b52deb8ea746bc760cddd6e100ca5cfd8/build3'
>cd /builddir/build/BUILD/moose-core-0e12e41b52deb8ea746bc760cddd6e100ca5cfd8/build3 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/moose-core-0e12e41b52deb8ea746bc760cddd6e100ca5cfd8 /builddir/build/BUILD/moose-core-0e12e41b52deb8ea746bc760cddd6e100ca5cfd8 /builddir/build/BUILD/moose-core-0e12e41b52deb8ea746bc760cddd6e100ca5cfd8/build3 /builddir/build/BUILD/moose-core-0e12e41b52deb8ea746bc760cddd6e100ca5cfd8/build3 /builddir/build/BUILD/moose-core-0e12e41b52deb8ea746bc760cddd6e100ca5cfd8/build3/CMakeFiles/moose.bin.dir/DependInfo.cmake --color=
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>/usr/bin/c++  -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -DUSE_NUMPY -DUSE_SBML -I/usr/include/libxml2 -I/builddir/build/BUILD/moose-core-0e12e41b52deb8ea746bc760cddd6e100ca5cfd8/msg -I/builddir/build/BUILD/moose-core-0e12e41b52deb8ea746bc760cddd6e100ca5cfd8/basecode -I/usr/include/python3.7m -I/usr/lib64/python3.7/site-packages/numpy/core/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=zEC12 -mtune=z13 -fasynchronous-unwind-tables -fstack-clash-protection -DNDEBUG   -Wall -Wno-unused-variable -Wno-unused-function -fPIC -UDO_UNIT_TESTS -O3 -o CMakeFiles/moose.bin.dir/basecode/main.cpp.o -c /builddir/build/BUILD/moose-core-0e12e41b52deb8ea746bc760cddd6e100ca5cfd8/basecode/main.cpp
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>/usr/bin/cmake -E cmake_link_script CMakeFiles/moose.bin.dir/link.txt --verbose=1
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>[ 99%] Building CXX object pymoose/CMakeFiles/moosepython.dir/test_moosemodule.cpp.o
>cd /builddir/build/BUILD/moose-core-0e12e41b52deb8ea746bc760cddd6e100ca5cfd8/build3/pymoose && /usr/bin/c++  -DNPY_NO_DEPRECATED_API=NPY_1_7_API_VERSION -DPYMOOSE -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -DUSE_NUMPY -DUSE_SBML -I/usr/include/libxml2 -I/builddir/build/BUILD/moose-core-0e12e41b52deb8ea746bc760cddd6e100ca5cfd8/msg -I/builddir/build/BUILD/moose-core-0e12e41b52deb8ea746bc760cddd6e100ca5cfd8/basecode -I/usr/include/python3.7m -I/builddir/build/BUILD/moose-core-0e12e41b52deb8ea746bc760cddd6e100ca5cfd8/pymoose/../basecode -I/builddir/build/BUILD/moose-core-0e12e41b52deb8ea746bc760cddd6e100ca5cfd8/pymoose/../msg -I/usr/lib64/python3.7/site-packages/numpy/core/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=zEC12 -mtune=z13 -fasynchronous-unwind-tables -fstack-clash-protection -DNDEBUG   -Wall -Wno-unused-variable -Wno-unused-function -fPIC -UDO_UNIT_TESTS -O3 -o CMakeFiles/moosepython.dir/test_moosemodule.cpp.o -c /builddir/build/BUILD/moose-core-0e12e41b52deb8ea746bc760cddd6e100ca5cfd8/pymoose/test_moosemodule.cpp
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>[100%] Building CXX object pymoose/CMakeFiles/moosepython.dir/PyRun.cpp.o
>cd /builddir/build/BUILD/moose-core-0e12e41b52deb8ea746bc760cddd6e100ca5cfd8/build3/pymoose && /usr/bin/c++  -DNPY_NO_DEPRECATED_API=NPY_1_7_API_VERSION -DPYMOOSE -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -DUSE_NUMPY -DUSE_SBML -I/usr/include/libxml2 -I/builddir/build/BUILD/moose-core-0e12e41b52deb8ea746bc760cddd6e100ca5cfd8/msg -I/builddir/build/BUILD/moose-core-0e12e41b52deb8ea746bc760cddd6e100ca5cfd8/basecode -I/usr/include/python3.7m -I/builddir/build/BUILD/moose-core-0e12e41b52deb8ea746bc760cddd6e100ca5cfd8/pymoose/../basecode -I/builddir/build/BUILD/moose-core-0e12e41b52deb8ea746bc760cddd6e100ca5cfd8/pymoose/../msg -I/usr/lib64/python3.7/site-packages/numpy/core/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=zEC12 -mtune=z13 -fasynchronous-unwind-tables -fstack-clash-protection -DNDEBUG   -Wall -Wno-unused-variable -Wno-unused-function -fPIC -UDO_UNIT_TESTS -O3 -o CMakeFiles/moosepython.dir/PyRun.cpp.o -c /builddir/build/BUILD/moose-core-0e12e41b52deb8ea746bc760cddd6e100ca5cfd8/pymoose/PyRun.cpp
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>[ 96%] Building CXX object pymoose/CMakeFiles/moosepython.dir/melement.cpp.o
>cd /builddir/build/BUILD/moose-core-0e12e41b52deb8ea746bc760cddd6e100ca5cfd8/build3/pymoose && /usr/bin/c++  -DNPY_NO_DEPRECATED_API=NPY_1_7_API_VERSION -DPYMOOSE -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -DUSE_NUMPY -DUSE_SBML -I/usr/include/libxml2 -I/builddir/build/BUILD/moose-core-0e12e41b52deb8ea746bc760cddd6e100ca5cfd8/msg -I/builddir/build/BUILD/moose-core-0e12e41b52deb8ea746bc760cddd6e100ca5cfd8/basecode -I/usr/include/python3.7m -I/builddir/build/BUILD/moose-core-0e12e41b52deb8ea746bc760cddd6e100ca5cfd8/pymoose/../basecode -I/builddir/build/BUILD/moose-core-0e12e41b52deb8ea746bc760cddd6e100ca5cfd8/pymoose/../msg -I/usr/lib64/python3.7/site-packages/numpy/core/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=zEC12 -mtune=z13 -fasynchronous-unwind-tables -fstack-clash-protection -DNDEBUG   -Wall -Wno-unused-variable -Wno-unused-function -fPIC -UDO_UNIT_TESTS -O3 -o CMakeFiles/moosepython.dir/melement.cpp.o -c /builddir/build/BUILD/moose-core-0e12e41b52deb8ea746bc760cddd6e100ca5cfd8/pymoose/melement.cpp
>make[2]: Leaving directory '/builddir/build/BUILD/moose-core-0e12e41b52deb8ea746bc760cddd6e100ca5cfd8/build3'
>make[2]: Entering directory '/builddir/build/BUILD/moose-core-0e12e41b52deb8ea746bc760cddd6e100ca5cfd8/build3'
>[100%] Linking CXX static library libmoosepython.a
>cd /builddir/build/BUILD/moose-core-0e12e41b52deb8ea746bc760cddd6e100ca5cfd8/build3/pymoose && /usr/bin/cmake -P CMakeFiles/moosepython.dir/cmake_clean_target.cmake
>cd /builddir/build/BUILD/moose-core-0e12e41b52deb8ea746bc760cddd6e100ca5cfd8/build3/pymoose && /usr/bin/cmake -E cmake_link_script CMakeFiles/moosepython.dir/link.txt --verbose=1
>/usr/bin/ar qc libmoosepython.a  CMakeFiles/moosepython.dir/vec.cpp.o CMakeFiles/moosepython.dir/mfield.cpp.o CMakeFiles/moosepython.dir/pymooseinit.cpp.o CMakeFiles/moosepython.dir/melement.cpp.o CMakeFiles/moosepython.dir/test_moosemodule.cpp.o CMakeFiles/moosepython.dir/PyRun.cpp.o
>/usr/bin/ranlib libmoosepython.a
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>make[1]: Entering directory '/builddir/build/BUILD/moose-core-0e12e41b52deb8ea746bc760cddd6e100ca5cfd8/build3'
>[100%] Built target moosepython
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>/usr/bin/make -f CMakeFiles/_moose.dir/build.make CMakeFiles/_moose.dir/depend
>make[2]: Entering directory '/builddir/build/BUILD/moose-core-0e12e41b52deb8ea746bc760cddd6e100ca5cfd8/build3'
>cd /builddir/build/BUILD/moose-core-0e12e41b52deb8ea746bc760cddd6e100ca5cfd8/build3 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/moose-core-0e12e41b52deb8ea746bc760cddd6e100ca5cfd8 /builddir/build/BUILD/moose-core-0e12e41b52deb8ea746bc760cddd6e100ca5cfd8 /builddir/build/BUILD/moose-core-0e12e41b52deb8ea746bc760cddd6e100ca5cfd8/build3 /builddir/build/BUILD/moose-core-0e12e41b52deb8ea746bc760cddd6e100ca5cfd8/build3 /builddir/build/BUILD/moose-core-0e12e41b52deb8ea746bc760cddd6e100ca5cfd8/build3/CMakeFiles/_moose.dir/DependInfo.cmake --color=
>Scanning dependencies of target _moose
>make[2]: Leaving directory '/builddir/build/BUILD/moose-core-0e12e41b52deb8ea746bc760cddd6e100ca5cfd8/build3'
>/usr/bin/make -f CMakeFiles/_moose.dir/build.make CMakeFiles/_moose.dir/build
>make[2]: Entering directory '/builddir/build/BUILD/moose-core-0e12e41b52deb8ea746bc760cddd6e100ca5cfd8/build3'
>[100%] Building CXX object CMakeFiles/_moose.dir/pymoose/moosemodule.cpp.o
>/usr/bin/c++  -DPYMOOSE -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -DUSE_NUMPY -DUSE_SBML -D_moose_EXPORTS -I/usr/include/libxml2 -I/builddir/build/BUILD/moose-core-0e12e41b52deb8ea746bc760cddd6e100ca5cfd8/msg -I/builddir/build/BUILD/moose-core-0e12e41b52deb8ea746bc760cddd6e100ca5cfd8/basecode -I/usr/include/python3.7m -I/usr/lib64/python3.7/site-packages/numpy/core/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=zEC12 -mtune=z13 -fasynchronous-unwind-tables -fstack-clash-protection -DNDEBUG -fPIC   -Wall -Wno-unused-variable -Wno-unused-function -fPIC -UDO_UNIT_TESTS -O3 -o CMakeFiles/_moose.dir/pymoose/moosemodule.cpp.o -c /builddir/build/BUILD/moose-core-0e12e41b52deb8ea746bc760cddd6e100ca5cfd8/pymoose/moosemodule.cpp
>make[2]: Leaving directory '/builddir/build/BUILD/moose-core-0e12e41b52deb8ea746bc760cddd6e100ca5cfd8/build3'
>In file included from /usr/lib64/python3.7/site-packages/numpy/core/include/numpy/ndarraytypes.h:1816,
>                 from /usr/lib64/python3.7/site-packages/numpy/core/include/numpy/ndarrayobject.h:18,
>                 from /usr/lib64/python3.7/site-packages/numpy/core/include/numpy/arrayobject.h:4,
>                 from /builddir/build/BUILD/moose-core-0e12e41b52deb8ea746bc760cddd6e100ca5cfd8/pymoose/moosemodule.cpp:81:
>/usr/lib64/python3.7/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:15:2: warning: #warning "Using deprecated NumPy API, disable it by " "#defining NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
> #warning "Using deprecated NumPy API, disable it by " \
>  ^~~~~~~
>/builddir/build/BUILD/moose-core-0e12e41b52deb8ea746bc760cddd6e100ca5cfd8/pymoose/moosemodule.cpp: In function 'int defineDestFinfos(const Cinfo*)':
>/builddir/build/BUILD/moose-core-0e12e41b52deb8ea746bc760cddd6e100ca5cfd8/pymoose/moosemodule.cpp:2364:36: error: invalid conversion from 'const char*' to 'char*' [-fpermissive]
>             strncpy(vec[currIndex].name,
>In file included from /usr/include/features.h:428,
>                 from /usr/include/bits/libc-header-start.h:33,
>                 from /usr/include/limits.h:26,
>                 from /usr/lib/gcc/s390x-redhat-linux/8/include/limits.h:194,
>                 from /usr/lib/gcc/s390x-redhat-linux/8/include/syslimits.h:7,
>                 from /usr/lib/gcc/s390x-redhat-linux/8/include/limits.h:34,
>                 from /usr/include/python3.7m/Python.h:11,
>                 from /builddir/build/BUILD/moose-core-0e12e41b52deb8ea746bc760cddd6e100ca5cfd8/pymoose/moosemodule.cpp:78:
>/usr/include/bits/string_fortified.h:103:1: note:   initializing argument 1 of 'char* strncpy(char*, const char*, size_t)'
> __NTH (strncpy (char *__restrict __dest, const char *__restrict __src,
> ^~~~~
>make[2]: *** [CMakeFiles/_moose.dir/build.make:66: CMakeFiles/_moose.dir/pymoose/moosemodule.cpp.o] Error 1
>make[1]: *** [CMakeFiles/Makefile2:269: CMakeFiles/_moose.dir/all] Error 2
>make: *** [Makefile:166: all] Error 2
>RPM build errors:
>error: Bad exit status from /var/tmp/rpm-tmp.YSnxMM (%build)
>    Bad exit status from /var/tmp/rpm-tmp.YSnxMM (%build)
>Child return code was: 1
>EXCEPTION: [Error()]
>Traceback (most recent call last):
>  File "/usr/lib/python3.6/site-packages/mockbuild/trace_decorator.py", line 89, in trace
>    result = func(*args, **kw)
>  File "/usr/lib/python3.6/site-packages/mockbuild/util.py", line 582, in do
>    raise exception.Error("Command failed. See logs for output.\n # %s" % (command,), child.returncode)
>mockbuild.exception.Error: Command failed. See logs for output.
> # bash --login -c /usr/bin/rpmbuild -bb --target s390x --nodeps /builddir/build/SPECS/moose.spec

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Attachments on bug 1604882: 1464442 | 1464443 | 1464444