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Red Hat Bugzilla – Attachment 1978662 Details for
Bug 2226089
petsc: FTBFS in Fedora rawhide/f39
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build.log
build.log (text/plain), 32.00 KB, created by
Fedora Release Engineering
on 2023-07-25 18:55:52 UTC
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Description:
build.log
Filename:
MIME Type:
Creator:
Fedora Release Engineering
Created:
2023-07-25 18:55:52 UTC
Size:
32.00 KB
patch
obsolete
>r/aarch64/include -I/usr/include/openmpi-aarch64/hypre -I/usr/include/openmpi-aarch64/superlu_dist -I/usr/include/openmpi-aarch64/scotch -MMD -MP /builddir/build/BUILD/petsc-3.18.5/buildopenmpi_dir/src/tao/constrained/impls/ipm/pdipm.c -o aarch64/obj/tao/constrained/impls/ipm/pdipm.o >/usr/lib64/openmpi/bin/mpicc -c -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O3 -fPIC -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O3 -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/petsc-3.18.5/buildopenmpi_dir/include -I/builddir/build/BUILD/petsc-3.18.5/buildopenmpi_dir/aarch64/include -I/usr/include/openmpi-aarch64/hypre -I/usr/include/openmpi-aarch64/superlu_dist -I/usr/include/openmpi-aarch64/scotch -MMD -MP /builddir/build/BUILD/petsc-3.18.5/buildopenmpi_dir/src/tao/bound/impls/bncg/bncg.c -o aarch64/obj/tao/bound/impls/bncg/bncg.o >/usr/lib64/openmpi/bin/mpif90 -c -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules -O3 -fPIC -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules -O3 -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules -I/builddir/build/BUILD/petsc-3.18.5/buildopenmpi_dir/include -I/builddir/build/BUILD/petsc-3.18.5/buildopenmpi_dir/aarch64/include -I/usr/include/openmpi-aarch64/hypre -I/usr/include/openmpi-aarch64/superlu_dist -I/usr/include/openmpi-aarch64/scotch -MMD -MP /builddir/build/BUILD/petsc-3.18.5/buildopenmpi_dir/src/dm/f90-mod/petscdmswarmmod.F90 -o aarch64/obj/dm/f90-mod/petscdmswarmmod.o -J/builddir/build/BUILD/petsc-3.18.5/buildopenmpi_dir/aarch64/include >/usr/lib64/openmpi/bin/mpif90 -c -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules -O3 -fPIC -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules -O3 -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules -I/builddir/build/BUILD/petsc-3.18.5/buildopenmpi_dir/include -I/builddir/build/BUILD/petsc-3.18.5/buildopenmpi_dir/aarch64/include -I/usr/include/openmpi-aarch64/hypre -I/usr/include/openmpi-aarch64/superlu_dist -I/usr/include/openmpi-aarch64/scotch -MMD -MP /builddir/build/BUILD/petsc-3.18.5/buildopenmpi_dir/src/dm/f90-mod/petscdmdamod.F90 -o aarch64/obj/dm/f90-mod/petscdmdamod.o -J/builddir/build/BUILD/petsc-3.18.5/buildopenmpi_dir/aarch64/include >/usr/lib64/openmpi/bin/mpif90 -c -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules -O3 -fPIC -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules -O3 -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules -I/builddir/build/BUILD/petsc-3.18.5/buildopenmpi_dir/include -I/builddir/build/BUILD/petsc-3.18.5/buildopenmpi_dir/aarch64/include -I/usr/include/openmpi-aarch64/hypre -I/usr/include/openmpi-aarch64/superlu_dist -I/usr/include/openmpi-aarch64/scotch -MMD -MP /builddir/build/BUILD/petsc-3.18.5/buildopenmpi_dir/src/dm/f90-mod/petscdmplexmod.F90 -o aarch64/obj/dm/f90-mod/petscdmplexmod.o -J/builddir/build/BUILD/petsc-3.18.5/buildopenmpi_dir/aarch64/include >/usr/lib64/openmpi/bin/mpicc -c -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O3 -fPIC -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O3 -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/petsc-3.18.5/buildopenmpi_dir/include -I/builddir/build/BUILD/petsc-3.18.5/buildopenmpi_dir/aarch64/include -I/usr/include/openmpi-aarch64/hypre -I/usr/include/openmpi-aarch64/superlu_dist -I/usr/include/openmpi-aarch64/scotch -MMD -MP /builddir/build/BUILD/petsc-3.18.5/buildopenmpi_dir/src/tao/leastsquares/impls/pounders/pounders.c -o aarch64/obj/tao/leastsquares/impls/pounders/pounders.o >/usr/lib64/openmpi/bin/mpif90 -c -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules -O3 -fPIC -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules -O3 -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules -I/builddir/build/BUILD/petsc-3.18.5/buildopenmpi_dir/include -I/builddir/build/BUILD/petsc-3.18.5/buildopenmpi_dir/aarch64/include -I/usr/include/openmpi-aarch64/hypre -I/usr/include/openmpi-aarch64/superlu_dist -I/usr/include/openmpi-aarch64/scotch -MMD -MP /builddir/build/BUILD/petsc-3.18.5/buildopenmpi_dir/src/ksp/f90-mod/petsckspdefmod.F90 -o aarch64/obj/ksp/f90-mod/petsckspdefmod.o -J/builddir/build/BUILD/petsc-3.18.5/buildopenmpi_dir/aarch64/include >/usr/lib64/openmpi/bin/mpif90 -c -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules -O3 -fPIC -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules -O3 -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules -I/builddir/build/BUILD/petsc-3.18.5/buildopenmpi_dir/include -I/builddir/build/BUILD/petsc-3.18.5/buildopenmpi_dir/aarch64/include -I/usr/include/openmpi-aarch64/hypre -I/usr/include/openmpi-aarch64/superlu_dist -I/usr/include/openmpi-aarch64/scotch -MMD -MP /builddir/build/BUILD/petsc-3.18.5/buildopenmpi_dir/src/ksp/f90-mod/petscpcmod.F90 -o aarch64/obj/ksp/f90-mod/petscpcmod.o -J/builddir/build/BUILD/petsc-3.18.5/buildopenmpi_dir/aarch64/include >/usr/lib64/openmpi/bin/mpif90 -c -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules -O3 -fPIC -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules -O3 -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules -I/builddir/build/BUILD/petsc-3.18.5/buildopenmpi_dir/include -I/builddir/build/BUILD/petsc-3.18.5/buildopenmpi_dir/aarch64/include -I/usr/include/openmpi-aarch64/hypre -I/usr/include/openmpi-aarch64/superlu_dist -I/usr/include/openmpi-aarch64/scotch -MMD -MP /builddir/build/BUILD/petsc-3.18.5/buildopenmpi_dir/src/ksp/f90-mod/petsckspmod.F90 -o aarch64/obj/ksp/f90-mod/petsckspmod.o -J/builddir/build/BUILD/petsc-3.18.5/buildopenmpi_dir/aarch64/include >/usr/lib64/openmpi/bin/mpif90 -c -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules -O3 -fPIC -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules -O3 -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules -I/builddir/build/BUILD/petsc-3.18.5/buildopenmpi_dir/include -I/builddir/build/BUILD/petsc-3.18.5/buildopenmpi_dir/aarch64/include -I/usr/include/openmpi-aarch64/hypre -I/usr/include/openmpi-aarch64/superlu_dist -I/usr/include/openmpi-aarch64/scotch -MMD -MP /builddir/build/BUILD/petsc-3.18.5/buildopenmpi_dir/src/snes/f90-mod/petscsnesmod.F90 -o aarch64/obj/snes/f90-mod/petscsnesmod.o -J/builddir/build/BUILD/petsc-3.18.5/buildopenmpi_dir/aarch64/include >/usr/lib64/openmpi/bin/mpif90 -c -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules -O3 -fPIC -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules -O3 -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules -I/builddir/build/BUILD/petsc-3.18.5/buildopenmpi_dir/include -I/builddir/build/BUILD/petsc-3.18.5/buildopenmpi_dir/aarch64/include -I/usr/include/openmpi-aarch64/hypre -I/usr/include/openmpi-aarch64/superlu_dist -I/usr/include/openmpi-aarch64/scotch -MMD -MP /builddir/build/BUILD/petsc-3.18.5/buildopenmpi_dir/src/ts/f90-mod/petsctsmod.F90 -o aarch64/obj/ts/f90-mod/petsctsmod.o -J/builddir/build/BUILD/petsc-3.18.5/buildopenmpi_dir/aarch64/include >/usr/lib64/openmpi/bin/mpif90 -c -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules -O3 -fPIC -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules -O3 -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules -I/builddir/build/BUILD/petsc-3.18.5/buildopenmpi_dir/include -I/builddir/build/BUILD/petsc-3.18.5/buildopenmpi_dir/aarch64/include -I/usr/include/openmpi-aarch64/hypre -I/usr/include/openmpi-aarch64/superlu_dist -I/usr/include/openmpi-aarch64/scotch -MMD -MP /builddir/build/BUILD/petsc-3.18.5/buildopenmpi_dir/src/tao/f90-mod/petsctaomod.F90 -o aarch64/obj/tao/f90-mod/petsctaomod.o -J/builddir/build/BUILD/petsc-3.18.5/buildopenmpi_dir/aarch64/include >/usr/lib64/openmpi/bin/mpicc -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -fPIC -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O3 -fPIC -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O3 -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -fPIC -shared -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O3 -fPIC -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O3 -Wl,-soname,libpetsc.so.3.18 -o aarch64/lib/libpetsc.so.3.18.5 @aarch64/lib/libpetsc.so.3.18.5.args -L/usr/lib64/openmpi/lib -lHYPRE -ldmumps -lmumps_common -lpord -lpthread -lscalapack -lsuperlu_dist -lflexiblas -lptscotch -lscotch -lptscotcherr -lscotcherr -lhdf5 -lhdf5_hl -lmetis -lm -lX11 -lstdc++ -ldl -lmpi -lmpi_mpifh >gmake[3]: Leaving directory '/builddir/build/BUILD/petsc-3.18.5/buildopenmpi_dir' >gmake[2]: Leaving directory '/builddir/build/BUILD/petsc-3.18.5/buildopenmpi_dir' >========================================= >Now to install the libraries do: >sudo make PETSC_DIR=/builddir/build/BUILD/petsc-3.18.5/buildopenmpi_dir PETSC_ARCH=aarch64 install >========================================= >+ export PETSC_ARCH=aarch64 >+ PETSC_ARCH=aarch64 >+ export PETSC_DIR=./ >+ PETSC_DIR=./ >+ CFLAGS='-O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' >+ LDFLAGS='-Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 ' >+ /usr/bin/python3 setup.py build '--executable=/usr/bin/python3 -sP' >/builddir/build/BUILD/petsc-3.18.5/buildopenmpi_dir/conf/baseconf.py:64: SyntaxWarning: invalid escape sequence '\s' > flag, count = re.subn('-arch\s+\w+', ' ', str(flag)) >/builddir/build/BUILD/petsc-3.18.5/buildopenmpi_dir/conf/baseconf.py:753: SyntaxWarning: invalid escape sequence '\s' > _variable_rx = _re.compile("([a-zA-Z][a-zA-Z0-9_]+)\s*=\s*(.*)") >/usr/lib/python3.12/site-packages/setuptools/__init__.py:84: _DeprecatedInstaller: setuptools.installer and fetch_build_eggs are deprecated. >!! > ******************************************************************************** > Requirements should be satisfied by a PEP 517 installer. > If you are using pip, you can try `pip install --use-pep517`. > ******************************************************************************** >!! > dist.fetch_build_eggs(dist.setup_requires) >WARNING: The wheel package is not available. >running build >running build_src >/builddir/build/BUILD/petsc-3.18.5/buildopenmpi_dir/setup.py:215: DeprecationWarning: distutils Version classes are deprecated. Use packaging.version instead. > Version(AVAILABLE) < Version(REQUIRED)): >cythonizing 'petsc4py.PETSc.pyx' -> 'petsc4py.PETSc.c' >warning: petsc4py.PETSc.pyx:1:0: Dotted filenames ('petsc4py.PETSc.pyx') are deprecated. Please use the normal Python package directory layout. >warning: PETSc/PETSc.pyx:53:48: The keyword 'nogil' should appear at the end of the function signature line. Placing it before 'except' or 'noexcept' will be disallowed in a future version of Cython. >warning: PETSc/petscvec.pxi:487:79: The keyword 'nogil' should appear at the end of the function signature line. Placing it before 'except' or 'noexcept' will be disallowed in a future version of Cython. >warning: PETSc/petscvec.pxi:492:79: The keyword 'nogil' should appear at the end of the function signature line. Placing it before 'except' or 'noexcept' will be disallowed in a future version of Cython. >warning: PETSc/petscvec.pxi:521:42: The keyword 'nogil' should appear at the end of the function signature line. Placing it before 'except' or 'noexcept' will be disallowed in a future version of Cython. >warning: PETSc/petscvec.pxi:528:42: The keyword 'nogil' should appear at the end of the function signature line. Placing it before 'except' or 'noexcept' will be disallowed in a future version of Cython. >Error compiling Cython file: >------------------------------------------------------------ >... >cdef object PetscGetPyDict(PetscObject obj, bint create): > if obj.python_context != NULL: > return <object>obj.python_context > if create: > obj.python_destroy = PetscDelPyDict > ^ >------------------------------------------------------------ >PETSc/petscobj.pxi:98:29: Cannot assign type 'int (void *) except? -1 nogil' to 'int (*)(void *) noexcept' >Error compiling Cython file: >------------------------------------------------------------ >... > PetscDEALLOC(p) > return 0 >cdef inline void TypeEnableGC(PyTypeObject *t): > ## printf("%s: enforcing GC support\n", t.tp_name) > t.tp_traverse = tp_traverse > ^ >------------------------------------------------------------ >PETSc/cyclicgc.pxi:38:20: Cannot assign type 'int (PyObject *, visitproc, void *) except? -1' to 'traverseproc *' >Error compiling Cython file: >------------------------------------------------------------ >... > return 0 >cdef inline void TypeEnableGC(PyTypeObject *t): > ## printf("%s: enforcing GC support\n", t.tp_name) > t.tp_traverse = tp_traverse > t.tp_clear = tp_clear > ^ >------------------------------------------------------------ >PETSc/cyclicgc.pxi:39:20: Cannot assign type 'int (PyObject *) except? -1' to 'inquiry *' >Error compiling Cython file: >------------------------------------------------------------ >... > dtype.lanes = <uint16_t>1 > dlm_tensor.manager_ctx = <void *>self.vec > CHKERR( PetscObjectReference(<PetscObject>self.vec) ) > dlm_tensor.manager_deleter = manager_deleter > dlm_tensor.del_obj = <dlpack_manager_del_obj>PetscDEALLOC > return PyCapsule_New(dlm_tensor, 'dltensor', pycapsule_deleter) > ^ >------------------------------------------------------------ >PETSc/Vec.pyx:551:53: Cannot assign type 'void (object) except *' to 'PyCapsule_Destructor' >Error compiling Cython file: >------------------------------------------------------------ >... > dtype.lanes = <uint16_t>1 > dlm_tensor.manager_ctx = <void *>self.mat > CHKERR( PetscObjectReference(<PetscObject>self.mat) ) > dlm_tensor.manager_deleter = manager_deleter > dlm_tensor.del_obj = <dlpack_manager_del_obj>PetscDEALLOC > return PyCapsule_New(dlm_tensor, 'dltensor', pycapsule_deleter) > ^ >------------------------------------------------------------ >PETSc/Mat.pyx:1978:53: Cannot assign type 'void (object) except *' to 'PyCapsule_Destructor' >Error compiling Cython file: >------------------------------------------------------------ >... > # manage PETSc finalization > if not (<int>PetscInitializeCalled): return > if (<int>PetscFinalizeCalled): return > # stop stdout/stderr redirect > if (prevfprintf != NULL): > PetscVFPrintf = prevfprintf > ^ >------------------------------------------------------------ >PETSc/PETSc.pyx:340:24: Cannot assign type 'int (*)(FILE *, const char *, va_list) except *' to 'int (*)(FILE *, char *, va_list) noexcept' >Error compiling Cython file: >------------------------------------------------------------ >... >cdef int _push_vfprintf(int (*vfprintf)(FILE *, const char*, va_list)) except -1: > global PetscVFPrintf, prevfprintf > assert prevfprintf == NULL > prevfprintf = PetscVFPrintf > PetscVFPrintf = vfprintf > ^ >------------------------------------------------------------ >PETSc/PETSc.pyx:382:20: Cannot assign type 'int (*)(FILE *, const char *, va_list) except *' to 'int (*)(FILE *, char *, va_list) noexcept' >Error compiling Cython file: >------------------------------------------------------------ >... > PetscVFPrintf = vfprintf >cdef int _pop_vfprintf() except -1: > global PetscVFPrintf, prevfprintf > assert prevfprintf != NULL > PetscVFPrintf = prevfprintf > ^ >------------------------------------------------------------ >PETSc/PETSc.pyx:387:20: Cannot assign type 'int (*)(FILE *, const char *, va_list) except *' to 'int (*)(FILE *, char *, va_list) noexcept' >Error compiling Cython file: >------------------------------------------------------------ >... > CHKERR( PetscPushErrorHandler(handler, NULL) ) > import sys > if (sys.stdout != sys.__stdout__) or (sys.stderr != sys.__stderr__): > _push_vfprintf(&PetscVFPrintf_PythonStd) > # register finalization function > if Py_AtExit(finalize) < 0: > ^ >------------------------------------------------------------ >PETSc/PETSc.pyx:409:17: Cannot assign type 'void (void) except * nogil' to 'void (*)(void) noexcept' >error: Cython failure: 'petsc4py.PETSc.pyx' -> 'petsc4py.PETSc.c' >error: Bad exit status from /var/tmp/rpm-tmp.R1HJpp (%build) > Bad exit status from /var/tmp/rpm-tmp.R1HJpp (%build) >RPM build errors: >Child return code was: 1 >EXCEPTION: [Error('Command failed: \n # /usr/bin/systemd-nspawn -q -M 44fae204efee41dab1ec04ab4f4c2ace -D /var/lib/mock/f39-build-44326216-5276177/root -a -u mockbuild --capability=cap_ipc_lock --bind=/tmp/mock-resolv.l2luj6l6:/etc/resolv.conf --bind=/dev/btrfs-control --bind=/dev/mapper/control --bind=/dev/loop-control --bind=/dev/loop0 --bind=/dev/loop1 --bind=/dev/loop2 --bind=/dev/loop3 --bind=/dev/loop4 --bind=/dev/loop5 --bind=/dev/loop6 --bind=/dev/loop7 --bind=/dev/loop8 --bind=/dev/loop9 --bind=/dev/loop10 --bind=/dev/loop11 --console=pipe --setenv=TERM=vt100 --setenv=SHELL=/bin/bash --setenv=HOME=/builddir --setenv=HOSTNAME=mock --setenv=PATH=/usr/bin:/bin:/usr/sbin:/sbin --setenv=PROMPT_COMMAND=printf "\\033]0;<mock-chroot>\\007" --setenv=PS1=<mock-chroot> \\s-\\v\\$ --setenv=LANG=C.UTF-8 --resolv-conf=off bash --login -c /usr/bin/rpmbuild -bb --noclean --target aarch64 --nodeps /builddir/build/SPECS/petsc.spec\n', 1)] >Traceback (most recent call last): > File "/usr/lib/python3.11/site-packages/mockbuild/trace_decorator.py", line 93, in trace > result = func(*args, **kw) > ^^^^^^^^^^^^^^^^^ > File "/usr/lib/python3.11/site-packages/mockbuild/util.py", line 597, in do_with_status > raise exception.Error("Command failed: \n # %s\n%s" % (command, output), child.returncode) >mockbuild.exception.Error: Command failed: > # /usr/bin/systemd-nspawn -q -M 44fae204efee41dab1ec04ab4f4c2ace -D /var/lib/mock/f39-build-44326216-5276177/root -a -u mockbuild --capability=cap_ipc_lock --bind=/tmp/mock-resolv.l2luj6l6:/etc/resolv.conf --bind=/dev/btrfs-control --bind=/dev/mapper/control --bind=/dev/loop-control --bind=/dev/loop0 --bind=/dev/loop1 --bind=/dev/loop2 --bind=/dev/loop3 --bind=/dev/loop4 --bind=/dev/loop5 --bind=/dev/loop6 --bind=/dev/loop7 --bind=/dev/loop8 --bind=/dev/loop9 --bind=/dev/loop10 --bind=/dev/loop11 --console=pipe --setenv=TERM=vt100 --setenv=SHELL=/bin/bash --setenv=HOME=/builddir --setenv=HOSTNAME=mock --setenv=PATH=/usr/bin:/bin:/usr/sbin:/sbin --setenv=PROMPT_COMMAND=printf "\033]0;<mock-chroot>\007" --setenv=PS1=<mock-chroot> \s-\v\$ --setenv=LANG=C.UTF-8 --resolv-conf=off bash --login -c /usr/bin/rpmbuild -bb --noclean --target aarch64 --nodeps /builddir/build/SPECS/petsc.spec >
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