Attachment 607366 Details for Bug 852237 – File: backtrace

File: backtrace

backtrace (text/plain), 37.32 KB, created by Joseph O Morrow on 2012-08-28 00:26:31 UTC

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Creator: Joseph O Morrow

Created: 2012-08-28 00:26:31 UTC

Size: 37.32 KB

patch

obsolete

>warning: core file may not match specified executable file.
>[New LWP 12831]
>[New LWP 12832]
>warning: File "/var/cache/abrt-di/usr/lib/debug/usr/lib/libpython2.7.so.1.0.debug-gdb.py" auto-loading has been declined by your `auto-load safe-path' set to "/usr/share/gdb/auto-load:/usr/lib/debug:/usr/bin/mono-gdb.py".
>[Thread debugging using libthread_db enabled]
>Using host libthread_db library "/lib/libthread_db.so.1".
>Core was generated by `/usr/bin/python /usr/lib/python2.7/site-packages/pymol/__init__.py'.
>Program terminated with signal 11, Segmentation fault.
>#0  0x00000000 in ?? ()
>
>Thread 2 (Thread 0xb4ad3b40 (LWP 12832)):
>#0  __kernel_vsyscall () at arch/x86/vdso/vdso32/sysenter.S:49
>No locals.
>#1  0xb74972e1 in select () at ../sysdeps/unix/syscall-template.S:82
>No locals.
>#2  0xb64e4135 in Sleep (milli=<optimized out>) at /usr/src/debug/Python-2.7.3/Modules/_tkinter.c:313
>        t = {tv_sec = 0, tv_usec = 13514}
>#3  0xb64e435b in Tkapp_MainLoop (selfptr=0x8b13480, args=0xb375d88c) at /usr/src/debug/Python-2.7.3/Modules/_tkinter.c:2649
>        _save = 0x8a6ee18
>        result = 0
>        threshold = 0
>        self = 0x8b13480
>        tstate = 0x8a6ee18
>#4  0xb7611daf in PyCFunction_Call (func=0xb3f9d50c, arg=0xb375d88c, kw=0x0) at /usr/src/debug/Python-2.7.3/Objects/methodobject.c:116
>        f = 0xb3f9d50c
>        meth = 0xb64e4140 <Tkapp_MainLoop>
>        self = <optimized out>
>        size = <optimized out>
>#5  0xb76713ba in call_function (oparg=<optimized out>, pp_stack=0xb4ad2854) at /usr/src/debug/Python-2.7.3/Python/ceval.c:4098
>        callargs = 0xb375d88c
>        flags = 1
>        tstate = <optimized out>
>        func = 0xb3f9d50c
>        w = <optimized out>
>        na = 145157656
>        nk = <optimized out>
>        n = 1
>        pfunc = 0xb37b1714
>        x = <optimized out>
>#6  PyEval_EvalFrameEx (f=0xb37b15d4, throwflag=0) at /usr/src/debug/Python-2.7.3/Python/ceval.c:2740
>        sp = 0xb37b1718
>        stack_pointer = <optimized out>
>        next_instr = 0x8a23073 "\001d\001"
>        opcode = <optimized out>
>        oparg = <optimized out>
>        why = WHY_NOT
>        err = 0
>        x = 0x8a6ee18
>        v = <optimized out>
>        w = <optimized out>
>        u = <optimized out>
>        t = <optimized out>
>        stream = 0x0
>        fastlocals = 0xb37b170c
>        freevars = 0xb37b1714
>        retval = 0x0
>        tstate = 0x8a6ee18
>        co = 0x8a222f0
>        instr_ub = -1
>        instr_lb = 0
>        instr_prev = -1
>        first_instr = 0x8a23064 "|"
>        names = 0x8a2082c
>        consts = 0x8a2080c
>#7  0xb76730d2 in PyEval_EvalCodeEx (co=0x8a222f0, globals=0x8a11bdc, locals=0x0, args=0xb37b119c, argcount=1, kws=0xb37b11a0, kwcount=0, defs=0x8ac37d8, defcount=1, closure=0x0) at /usr/src/debug/Python-2.7.3/Python/ceval.c:3330
>        f = 0xb37b15d4
>        retval = 0x0
>        fastlocals = 0xb37b170c
>        freevars = 0xb37b1714
>        tstate = 0x8a6ee18
>        x = <optimized out>
>        u = <optimized out>
>#8  0xb7671082 in fast_function (nk=<optimized out>, na=1, n=1, pp_stack=0xb4ad29b4, func=0x8ac764c) at /usr/src/debug/Python-2.7.3/Python/ceval.c:4194
>        co = <optimized out>
>        nd = 1
>        globals = 0x8a11bdc
>        argdefs = <optimized out>
>        d = <optimized out>
>#9  call_function (oparg=<optimized out>, pp_stack=0xb4ad29b4) at /usr/src/debug/Python-2.7.3/Python/ceval.c:4119
>        func = 0x8ac764c
>        w = <optimized out>
>        na = 1
>        nk = <optimized out>
>        n = 1
>        pfunc = 0xb37b119c
>        x = <optimized out>
>#10 PyEval_EvalFrameEx (f=0xb37b1054, throwflag=0) at /usr/src/debug/Python-2.7.3/Python/ceval.c:2740
>        sp = 0xb37b11a0
>        stack_pointer = <optimized out>
>        next_instr = 0x842d78c "\001|"
>        opcode = <optimized out>
>        oparg = <optimized out>
>        why = WHY_NOT
>        err = 0
>        x = 0x1
>        v = <optimized out>
>        w = <optimized out>
>        u = <optimized out>
>        t = <optimized out>
>        stream = 0x0
>        fastlocals = 0xb37b118c
>        freevars = 0xb37b119c
>        retval = 0x0
>        tstate = 0x8a6ee18
>        co = 0x8a00140
>        instr_ub = -1
>        instr_lb = 0
>        instr_prev = -1
>        first_instr = 0x842d734 "|"
>        names = 0x89f2764
>        consts = 0x89fe4b4
>#11 0xb76730d2 in PyEval_EvalCodeEx (co=0x8a00140, globals=0x89fa68c, locals=0x0, args=0xb4100a28, argcount=2, kws=0xb4100a30, kwcount=0, defs=0x8b0deb8, defcount=1, closure=0x0) at /usr/src/debug/Python-2.7.3/Python/ceval.c:3330
>        f = 0xb37b1054
>        retval = 0x0
>        fastlocals = 0xb37b118c
>        freevars = 0xb37b119c
>        tstate = 0x8a6ee18
>        x = <optimized out>
>        u = <optimized out>
>#12 0xb7671082 in fast_function (nk=<optimized out>, na=2, n=2, pp_stack=0xb4ad2b14, func=0x8b131b4) at /usr/src/debug/Python-2.7.3/Python/ceval.c:4194
>        co = <optimized out>
>        nd = 1
>        globals = 0x89fa68c
>        argdefs = <optimized out>
>        d = <optimized out>
>#13 call_function (oparg=<optimized out>, pp_stack=0xb4ad2b14) at /usr/src/debug/Python-2.7.3/Python/ceval.c:4119
>        func = 0x8b131b4
>        w = <optimized out>
>        na = 2
>        nk = <optimized out>
>        n = 2
>        pfunc = 0xb4100a28
>        x = <optimized out>
>#14 PyEval_EvalFrameEx (f=0xb41008e4, throwflag=0) at /usr/src/debug/Python-2.7.3/Python/ceval.c:2740
>        sp = 0xb4100a30
>        stack_pointer = <optimized out>
>        next_instr = 0x84c6412 "\001Wn\021"
>        opcode = <optimized out>
>        oparg = <optimized out>
>        why = WHY_NOT
>        err = 0
>        x = 0x2
>        v = <optimized out>
>        w = <optimized out>
>        u = <optimized out>
>        t = <optimized out>
>        stream = 0x0
>        fastlocals = 0xb4100a1c
>        freevars = 0xb4100a28
>        retval = 0x0
>        tstate = 0x8a6ee18
>        co = 0x84d6920
>        instr_ub = -1
>        instr_lb = 0
>        instr_prev = -1
>        first_instr = 0x84c63dc "y8"
>        names = 0x89f264c
>        consts = 0x84d0c34
>#15 0xb76730d2 in PyEval_EvalCodeEx (co=0x84d6920, globals=0x84b9824, locals=0x0, args=0x89f98f8, argcount=3, kws=0xb7743038, kwcount=0, defs=0x8ad2518, defcount=2, closure=0x0) at /usr/src/debug/Python-2.7.3/Python/ceval.c:3330
>        f = 0xb41008e4
>        retval = 0x0
>        fastlocals = 0xb4100a1c
>        freevars = 0xb4100a28
>        tstate = 0x8a6ee18
>        x = <optimized out>
>        u = <optimized out>
>#16 0xb75fc7be in function_call (func=0x89f28ec, arg=0x89f98ec, kw=0x8ae90b4) at /usr/src/debug/Python-2.7.3/Objects/funcobject.c:526
>        result = <optimized out>
>        argdefs = <optimized out>
>        kwtuple = 0xb774302c
>        d = 0x8ad2518
>        k = 0xb7743038
>        nk = <optimized out>
>        nd = 2
>#17 0xb75d52d5 in PyObject_Call (func=0x89f28ec, arg=0x89f98ec, kw=0x8ae90b4) at /usr/src/debug/Python-2.7.3/Objects/abstract.c:2529
>        result = <optimized out>
>        call = 0xb75fc610 <function_call>
>#18 0xb766f051 in ext_do_call (nk=144677100, na=0, flags=<optimized out>, pp_stack=0xb4ad2d34, func=0x89f28ec) at /usr/src/debug/Python-2.7.3/Python/ceval.c:4411
>        kwdict = 0x8ae90b4
>        nstar = 3
>        callargs = 0x89f98ec
>        stararg = 0x8b106e4
>        result = 0x0
>#19 PyEval_EvalFrameEx (f=0xb4100784, throwflag=0) at /usr/src/debug/Python-2.7.3/Python/ceval.c:2779
>        flags = 0
>        func = 0x89f28ec
>        na = 0
>        nk = 144677100
>        n = <optimized out>
>        pfunc = 0xb41008c0
>        sp = 0xb41008c4
>        stack_pointer = <optimized out>
>        next_instr = <optimized out>
>        opcode = 144648559
>        oparg = <optimized out>
>        why = WHY_NOT
>        err = 0
>        x = 0x0
>        v = <optimized out>
>        w = <optimized out>
>        u = <optimized out>
>        t = <optimized out>
>        stream = 0x0
>        fastlocals = 0xb41008bc
>        freevars = 0xb41008c0
>        retval = 0x0
>        tstate = 0x8a6ee18
>        co = 0x8163608
>        instr_ub = -1
>        instr_lb = 0
>        instr_prev = -1
>        first_instr = 0x814760c "z&"
>        names = 0x816434c
>        consts = 0x816170c
>#20 0xb767238b in fast_function (nk=<optimized out>, na=-1274017996, n=1, pp_stack=0xb4ad2e24, func=0x816b304) at /usr/src/debug/Python-2.7.3/Python/ceval.c:4184
>        retval = 0x0
>        i = <optimized out>
>        fastlocals = 0xb41008bc
>        f = 0xb4100784
>        tstate = <optimized out>
>        stack = <optimized out>
>        co = <optimized out>
>        nd = 0
>        globals = 0x8a6ee18
>        argdefs = <optimized out>
>        d = 0x0
>#21 call_function (oparg=<optimized out>, pp_stack=0xb4ad2e24) at /usr/src/debug/Python-2.7.3/Python/ceval.c:4119
>        func = 0x816b304
>        w = <optimized out>
>        na = -1274017996
>        nk = <optimized out>
>        n = 1
>        pfunc = 0xb4100734
>        x = <optimized out>
>#22 PyEval_EvalFrameEx (f=0xb41005ec, throwflag=0) at /usr/src/debug/Python-2.7.3/Python/ceval.c:2740
>        sp = 0xb4100738
>        stack_pointer = <optimized out>
>        next_instr = 0x81afa7a "\001Wn\a\001\004t\016"
>        opcode = <optimized out>
>        oparg = <optimized out>
>        why = WHY_NOT
>        err = 0
>        x = 0xb4100734
>        v = <optimized out>
>        w = <optimized out>
>        u = <optimized out>
>        t = <optimized out>
>        stream = 0x0
>        fastlocals = 0xb4100724
>        freevars = 0xb4100734
>        retval = 0x0
>        tstate = 0x8a6ee18
>        co = 0x8163728
>        instr_ub = -1
>        instr_lb = 0
>        instr_prev = -1
>        first_instr = 0x81af9d4 "z\322\001|"
>        names = 0xb777189c
>        consts = 0x81432ac
>#23 0xb767238b in fast_function (nk=<optimized out>, na=-1274018360, n=1, pp_stack=0xb4ad2f14, func=0x816b3ac) at /usr/src/debug/Python-2.7.3/Python/ceval.c:4184
>        retval = 0x0
>        i = <optimized out>
>        fastlocals = 0xb4100724
>        f = 0xb41005ec
>        tstate = <optimized out>
>        stack = <optimized out>
>        co = <optimized out>
>        nd = 0
>        globals = 0x8a6ee18
>        argdefs = <optimized out>
>        d = 0x0
>#24 call_function (oparg=<optimized out>, pp_stack=0xb4ad2f14) at /usr/src/debug/Python-2.7.3/Python/ceval.c:4119
>        func = 0x816b3ac
>        w = <optimized out>
>        na = -1274018360
>        nk = <optimized out>
>        n = 1
>        pfunc = 0xb41005c8
>        x = <optimized out>
>#25 PyEval_EvalFrameEx (f=0xb410048c, throwflag=0) at /usr/src/debug/Python-2.7.3/Python/ceval.c:2740
>        sp = 0xb41005cc
>        stack_pointer = <optimized out>
>        next_instr = 0x8143270 "\001Wn#"
>        opcode = <optimized out>
>        oparg = <optimized out>
>        why = WHY_NOT
>        err = 0
>        x = 0xb41005c8
>        v = <optimized out>
>        w = <optimized out>
>        u = <optimized out>
>        t = <optimized out>
>        stream = 0x0
>        fastlocals = 0xb41005c4
>        freevars = 0xb41005c8
>        retval = 0x0
>        tstate = 0x8a6ee18
>        co = 0x8163650
>        instr_ub = -1
>        instr_lb = 0
>        instr_prev = -1
>        first_instr = 0x8143264 "y\016"
>        names = 0x8164374
>        consts = 0x816176c
>#26 0xb76730d2 in PyEval_EvalCodeEx (co=0x8163650, globals=0x815702c, locals=0x0, args=0x84d3778, argcount=1, kws=0x0, kwcount=0, defs=0x0, defcount=0, closure=0x0) at /usr/src/debug/Python-2.7.3/Python/ceval.c:3330
>        f = 0xb410048c
>        retval = 0x0
>        fastlocals = 0xb41005c4
>        freevars = 0xb41005c8
>        tstate = 0x8a6ee18
>        x = <optimized out>
>        u = <optimized out>
>#27 0xb75fc6bd in function_call (func=0x816b33c, arg=0x84d376c, kw=0x0) at /usr/src/debug/Python-2.7.3/Objects/funcobject.c:526
>        result = <optimized out>
>        argdefs = <optimized out>
>        kwtuple = 0x0
>        d = 0x0
>        k = 0x0
>        nk = 0
>        nd = 0
>#28 0xb75d52d5 in PyObject_Call (func=0x816b33c, arg=0x84d376c, kw=0x0) at /usr/src/debug/Python-2.7.3/Objects/abstract.c:2529
>        result = <optimized out>
>        call = 0xb75fc610 <function_call>
>#29 0xb75e4dd0 in instancemethod_call (func=0x816b33c, arg=0x84d376c, kw=0x0) at /usr/src/debug/Python-2.7.3/Objects/classobject.c:2578
>        self = 0x89f4bac
>        klass = <optimized out>
>        result = <optimized out>
>#30 0xb75d52d5 in PyObject_Call (func=0x8ac9734, arg=0xb774302c, kw=0x0) at /usr/src/debug/Python-2.7.3/Objects/abstract.c:2529
>        result = <optimized out>
>        call = 0xb75e4d20 <instancemethod_call>
>#31 0xb766bebc in PyEval_CallObjectWithKeywords (func=0x8ac9734, arg=0xb774302c, kw=0x0) at /usr/src/debug/Python-2.7.3/Python/ceval.c:3967
>        result = <optimized out>
>#32 0xb76a2e91 in t_bootstrap (boot_raw=0x8a77310) at /usr/src/debug/Python-2.7.3/Modules/threadmodule.c:614
>        boot = 0x8a77310
>        tstate = 0x8a6ee18
>        res = <optimized out>
>#33 0xb7594cd3 in start_thread (arg=0xb4ad3b40) at pthread_create.c:309
>        __res = <optimized out>
>        pd = 0xb4ad3b40
>        now = <optimized out>
>        unwind_buf = {cancel_jmp_buf = {{jmp_buf = {-1218813964, 0, 4001536, -1263717272, 1347816668, -1196930853}, mask_was_saved = 0}}, priv = {pad = {0x0, 0x0, 0x0, 0x0}, data = {prev = 0x0, cleanup = 0x0, canceltype = 0}}}
>        not_first_call = <optimized out>
>        pagesize_m1 = <optimized out>
>        sp = <optimized out>
>        freesize = <optimized out>
>        __PRETTY_FUNCTION__ = "start_thread"
>#34 0xb749ea2e in clone () at ../sysdeps/unix/sysv/linux/i386/clone.S:133
>No locals.
>
>Thread 1 (Thread 0xb73aa6c0 (LWP 12831)):
>#0  0x00000000 in ?? ()
>No symbol table info available.
>#1  0xb6addfbe in CGOOptimizeGLSLCylindersToVBOIndexedImpl (I=0x8b2d4b0, est=0, no_color=0, leftOverCGO=0x0) at layer1/CGO.c:3969
>        bufpl = <optimized out>
>        bufs = {0, 0, 0, 0, 0}
>        org_axisVals = 0xb2b36008
>        org_colorVals = 0xb29d1008
>        org_indexVals = 0xb2707008
>        color2Vals = 0xb28a7708
>        tot = <optimized out>
>        copyColorToLeftOver = 1
>        copyAlphaToLeftOver = 1
>        org_color2Vals = 0xb286c008
>        axisVals = 0xb2b71708
>        axis = <optimized out>
>        col2 = {0.200000003, 0.200000003, 1}
>        indexVals = 0xb2749de8
>        copyToLeftOver = <optimized out>
>        copyPickColorToLeftOver = 0
>        min_alpha = 1
>        originVals = 0xb2d9d708
>        colorVals = 0xb2a0c708
>        rad = <optimized out>
>        capvals = <optimized out>
>        org_originVals = 0xb2d62008
>        cgo = 0x8842370
>        pc = 0x8c16504
>        op = 0
>        sz = <optimized out>
>        box_indices = {0, 2, 1, 2, 0, 3, 1, 6, 5, 6, 1, 2, 0, 1, 5, 5, 4, 0, 0, 7, 3, 7, 0, 4, 3, 6, 2, 6, 3, 7, 4, 5, 6, 6, 7, 4}
>        right_idx = {0, 1, 1, 0, 0, 1, 1, 0}
>        up_idx = {0, 0, 1, 1, 0, 0, 1, 1}
>        out_idx = {0, 0, 0, 0, 1, 1, 1, 1}
>        color2nd = <optimized out>
>        customCyl = <optimized out>
>        save_pc = 0x8c16504
>        num_total_cylinders = <optimized out>
>        num_cylinders_with_2nd_color = 1412
>        num_custom_cylinders = <optimized out>
>        num_custom_cylinders_with_2nd_color = 0
>        err = 0
>        has_draw_buffer = 0
>        min = {-10.0860004, -10.1929998, -43.8040009}
>        max = {45.9959984, 28.7479992, 31.2159996}
>        vv = <optimized out>
>        total_vert = 15216
>        total_cyl = 1902
>#2  0xb6adea84 in CGOOptimizeGLSLCylindersToVBOIndexed (I=0x8b2d4b0, est=0) at layer1/CGO.c:3742
>No locals.
>#3  0xb6beb001 in RepCylBondRender (I=0x89bc370, info=0xbfdc3780) at layer2/RepCylBond.c:408
>        convertcgo = 0x0
>        use_shader = 1
>        generate_shader_cgo = 1
>        use_display_lists = 0
>        shader_mode = 1
>        ray = <optimized out>
>        pick = 0x0
>        a = <optimized out>
>        vptr = <optimized out>
>        var_alpha = <optimized out>
>        c = <optimized out>
>        cc = <optimized out>
>        alpha = <optimized out>
>        sp = <optimized out>
>        G = <optimized out>
>        width = 1052
>        height = 759
>#4  0xb6b6b411 in CoordSetRender (I=0xb32780a0, info=0xbfdc3780) at layer2/CoordSet.c:1430
>        a = <optimized out>
>        aa = <optimized out>
>        float_labels = 0
>        pass = 1
>        ray = 0x0
>        pick = 0x0
>        r = <optimized out>
>        sculpt_vdw_vis_mode = <optimized out>
>        G = 0x81ba2d8
>#5  0xb6b91cf0 in ObjectMoleculeRender (I=0xb32775f8, info=0xbfdc3780) at layer2/ObjectMolecule.c:12496
>        G = 0x81ba2d8
>        state = 0
>        ray = 0x1
>        pick = 0x0
>        pass = <optimized out>
>        a = <optimized out>
>        cs = 0xb32780a0
>        pop_matrix = 0
>        use_matrices = 0
>#6  0xb6b331ff in SceneRenderAll (G=0x81ba2d8, context=0xbfdc39d0, normal=0xbfdc3a08, pickVLA=0x0, pass=1, fat=0, width_scale=0, grid=0xbfdc3984, dynamic_pass=0) at layer1/Scene.c:8574
>        slot_vla = 0x0
>        I = 0x89a6898
>        rec = <optimized out>
>        vv = {6.37894132e-34, 6.37893397e-34, -1.72050524, 9.36968915e-34}
>        state = 0
>        info = {state = 0, ray = 0x0, alpha_cgo = 0x0, pick = 0x0, pass = 1, width_scale_flag = 0, front = 26.0497437, back = 148.540833, stereo_front = 26.0497437, fog_start = 81.1707306, fog_end = 148.540833, view_normal = {-0.559262276, 0.690795481, -0.45829019}, width_scale = 0, vertex_scale = 0.0405535921, pmv_matrix = 0x89a69a0, sampling = 1, ortho = 0, line_lighting = 0, dynamic_width = 1, dynamic_width_factor = 0.0599999987, dynamic_width_min = 0.75, dynamic_width_max = 2.5}
>#7  0xb6b3a448 in DoRendering (G=0x81ba2d8, I=0x89a6898, offscreen=0, grid=0xbfdc3984, times=0, curState=0, normal=0xbfdc3a08, context=0xbfdc39d0, width_scale=0, renderTransparent=1, onlySelections=0, excludeSelections=0) at layer1/Scene.c:8925
>        slot = <optimized out>
>        pass = <optimized out>
>#8  0xb6b3fb2e in SceneRender (G=0x81ba2d8, pick=0x0, x=0, y=0, smp=0x0, oversize_width=0, oversize_height=0, click_side=0, force_copy=0) at layer1/Scene.c:9984
>        times = <optimized out>
>        origtimes = 1
>        offscreen = 0
>        I = <optimized out>
>        fog = {0, 0, 0, 1}
>        v = <optimized out>
>        lowBits = <optimized out>
>        highBits = <optimized out>
>        lowBitVLA = 0x0
>        highBitVLA = 0x0
>        high = <optimized out>
>        low = <optimized out>
>        zAxis = {0, 0, 1, 0}
>        normal = {-0.559262276, 0.690795481, -0.45829019, 0}
>        aspRat = 0
>        height = <optimized out>
>        width = <optimized out>
>        start_time = 34.855007988284342
>        view_save = {0, 0, 1272, 777}
>        pickVLA = <optimized out>
>        pik = <optimized out>
>        lastIndex = 0
>        lastPtr = 0x0
>        index = <optimized out>
>        curState = 0
>        nPick = <optimized out>
>        nHighBits = <optimized out>
>        nLowBits = <optimized out>
>        fov = 1.40129846e-45
>        must_render_stereo = <optimized out>
>        mono_as_quad_stereo = <optimized out>
>        stereo_using_mono_matrix = 0
>        debug_pick = <error reading variable debug_pick (Could not find type for DW_OP_GNU_const_type)>
>        render_buffer = 1029
>        context = {unit_left = -0.193017125, unit_right = 1.19301713, unit_top = 0, unit_bottom = 1, unit_front = -0.5, unit_back = 0.5}
>        width_scale = 0
>        stereo_mode = 0
>        stereo = 0
>        grid = {n_col = 0, n_row = 0, first_slot = 0, last_slot = 0, asp_adjust = 0, active = 0, size = 0, slot = 0, mode = 0, cur_view = {0, 0, 0, 0}, context = {unit_left = 0, unit_right = 0, unit_top = 0, unit_bottom = 0, unit_front = 0, unit_back = 0}}
>        grid_mode = 1029
>        fog_active = 1
>#9  0xb6afc7a6 in OrthoDoDraw (G=0x81ba2d8, render_mode=0) at layer1/Ortho.c:1606
>        I = 0xb4dac008
>        x = <optimized out>
>        y = <optimized out>
>        l = <optimized out>
>        lcount = <optimized out>
>        str = <optimized out>
>        v = <optimized out>
>        showLines = <optimized out>
>        height = <optimized out>
>        overlay = 0
>        text = <optimized out>
>        rightSceneMargin = 220
>        internal_feedback = 1
>        times = 1
>        double_pump = 0
>        bg_color = <optimized out>
>        skip_prompt = 0
>        render = <optimized out>
>        internal_gui_mode = 0
>#10 0xb6c4690e in ExecutiveDrawNow (G=0x81ba2d8) at layer3/Executive.c:12109
>        stereo_mode = 2
>        stereo = 0
>        I = 0x89bfcf8
>#11 0xb6cc6cf6 in PyMOL_Draw (I=0x84ea628) at layer5/PyMOL.c:3917
>        G = 0x81ba2d8
>#12 0xb6cc8f86 in MainDrawLocked () at layer5/main.c:831
>        G = 0x81ba2d8
>        I = 0x8502cd8
>#13 0xb6cc930f in MainDraw () at layer5/main.c:1081
>        skip = 0
>        I = 0x8502cd8
>        usec_sleep_after_draw = 0
>        G = 0x81ba2d8
>#14 0xb68f43c3 in fghRedrawWindow (window=0x8502b40) at freeglut_main.c:210
>        current_window = 0x8502b40
>#15 fghcbDisplayWindow (window=0x8502b40, enumerator=0xbfdc3e90) at freeglut_main.c:227
>No locals.
>#16 0xb68f7dc7 in fgEnumWindows (enumCallback=0xb68f4360 <fghcbDisplayWindow>, enumerator=0xbfdc3e90) at freeglut_structure.c:394
>        window = 0x8502b40
>#17 0xb68f486e in fghDisplayAll () at freeglut_main.c:249
>        enumerator = {found = 0 '\000', data = 0x0}
>#18 glutMainLoopEvent () at freeglut_main.c:1452
>        window = <optimized out>
>        event = {type = 6, xany = {type = 6, serial = 1406, send_event = 0, display = 0x84eb818, window = 20971522}, xkey = {type = 6, serial = 1406, send_event = 0, display = 0x84eb818, window = 20971522, root = 183, subwindow = 0, time = 86304050, x = 1241, y = 387, x_root = 1246, y_root = 620, state = 0, keycode = 3979362816, same_screen = 1}, xbutton = {type = 6, serial = 1406, send_event = 0, display = 0x84eb818, window = 20971522, root = 183, subwindow = 0, time = 86304050, x = 1241, y = 387, x_root = 1246, y_root = 620, state = 0, button = 3979362816, same_screen = 1}, xmotion = {type = 6, serial = 1406, send_event = 0, display = 0x84eb818, window = 20971522, root = 183, subwindow = 0, time = 86304050, x = 1241, y = 387, x_root = 1246, y_root = 620, state = 0, is_hint = 0 '\000', same_screen = 1}, xcrossing = {type = 6, serial = 1406, send_event = 0, display = 0x84eb818, window = 20971522, root = 183, subwindow = 0, time = 86304050, x = 1241, y = 387, x_root = 1246, y_root = 620, mode = 0, detail = -315604480, same_screen = 1, focus = -1283414024, state = 0}, xfocus = {type = 6, serial = 1406, send_event = 0, display = 0x84eb818, window = 20971522, mode = 183, detail = 0}, xexpose = {type = 6, serial = 1406, send_event = 0, display = 0x84eb818, window = 20971522, x = 183, y = 0, width = 86304050, height = 1241, count = 387}, xgraphicsexpose = {type = 6, serial = 1406, send_event = 0, display = 0x84eb818, drawable = 20971522, x = 183, y = 0, width = 86304050, height = 1241, count = 387, major_code = 1246, minor_code = 620}, xnoexpose = {type = 6, serial = 1406, send_event = 0, display = 0x84eb818, drawable = 20971522, major_code = 183, minor_code = 0}, xvisibility = {type = 6, serial = 1406, send_event = 0, display = 0x84eb818, window = 20971522, state = 183}, xcreatewindow = {type = 6, serial = 1406, send_event = 0, display = 0x84eb818, parent = 20971522, window = 183, x = 0, y = 86304050, width = 1241, height = 387, border_width = 1246, override_redirect = 620}, xdestroywindow = {type = 6, serial = 1406, send_event = 0, display = 0x84eb818, event = 20971522, window = 183}, xunmap = {type = 6, serial = 1406, send_event = 0, display = 0x84eb818, event = 20971522, window = 183, from_configure = 0}, xmap = {type = 6, serial = 1406, send_event = 0, display = 0x84eb818, event = 20971522, window = 183, override_redirect = 0}, xmaprequest = {type = 6, serial = 1406, send_event = 0, display = 0x84eb818, parent = 20971522, window = 183}, xreparent = {type = 6, serial = 1406, send_event = 0, display = 0x84eb818, event = 20971522, window = 183, parent = 0, x = 86304050, y = 1241, override_redirect = 387}, xconfigure = {type = 6, serial = 1406, send_event = 0, display = 0x84eb818, event = 20971522, window = 183, x = 0, y = 86304050, width = 1241, height = 387, border_width = 1246, above = 620, override_redirect = 0}, xgravity = {type = 6, serial = 1406, send_event = 0, display = 0x84eb818, event = 20971522, window = 183, x = 0, y = 86304050}, xresizerequest = {type = 6, serial = 1406, send_event = 0, display = 0x84eb818, window = 20971522, width = 183, height = 0}, xconfigurerequest = {type = 6, serial = 1406, send_event = 0, display = 0x84eb818, parent = 20971522, window = 183, x = 0, y = 86304050, width = 1241, height = 387, border_width = 1246, above = 620, detail = 0, value_mask = 3979362816}, xcirculate = {type = 6, serial = 1406, send_event = 0, display = 0x84eb818, event = 20971522, window = 183, place = 0}, xcirculaterequest = {type = 6, serial = 1406, send_event = 0, display = 0x84eb818, parent = 20971522, window = 183, place = 0}, xproperty = {type = 6, serial = 1406, send_event = 0, display = 0x84eb818, window = 20971522, atom = 183, time = 0, state = 86304050}, xselectionclear = {type = 6, serial = 1406, send_event = 0, display = 0x84eb818, window = 20971522, selection = 183, time = 0}, xselectionrequest = {type = 6, serial = 1406, send_event = 0, display = 0x84eb818, owner = 20971522, requestor = 183, selection = 0, target = 86304050, property = 1241, time = 387}, xselection = {type = 6, serial = 1406, send_event = 0, display = 0x84eb818, requestor = 20971522, selection = 183, target = 0, property = 86304050, time = 1241}, xcolormap = {type = 6, serial = 1406, send_event = 0, display = 0x84eb818, window = 20971522, colormap = 183, new = 0, state = 86304050}, xclient = {type = 6, serial = 1406, send_event = 0, display = 0x84eb818, window = 20971522, message_type = 183, format = 0, data = {b = "2\345$\005\331\004\000\000\203\001\000\000\336\004\000\000l\002\000", s = {-6862, 1316, 1241, 0, 387, 0, 1246, 0, 620, 0}, l = {86304050, 1241, 387, 1246, 620}}}, xmapping = {type = 6, serial = 1406, send_event = 0, display = 0x84eb818, window = 20971522, request = 183, first_keycode = 0, count = 86304050}, xerror = {type = 6, display = 0x57e, resourceid = 0, serial = 139376664, error_code = 2 '\002', request_code = 0 '\000', minor_code = 64 '@'}, xkeymap = {type = 6, serial = 1406, send_event = 0, display = 0x84eb818, window = 20971522, key_vector = "\267\000\000\000\000\000\000\000\062\345$\005\331\004\000\000\203\001\000\000\336\004\000\000l\002\000\000\000\000\000"}, xgeneric = {type = 6, serial = 1406, send_event = 0, display = 0x84eb818, extension = 20971522, evtype = 183}, xcookie = {type = 6, serial = 1406, send_event = 0, display = 0x84eb818, extension = 20971522, evtype = 183, cookie = 0, data = 0x524e532}, pad = {6, 1406, 0, 139376664, 20971522, 183, 0, 86304050, 1241, 387, 1246, 620, 0, -315604480, 1, -1283414024, 0, 0, 0, 1147605988, 135727940, -1217009952, 631683302, -1282301708}}
>#19 0xb68f5104 in glutMainLoop () at freeglut_main.c:1500
>        window = <optimized out>
>        action = <optimized out>
>#20 0xb6ccaaca in launch (options=<optimized out>, own_the_options=<optimized out>) at layer5/main.c:1955
>        I = 0x8502cd8
>        multisample_mask = <optimized out>
>        theWindow = 1
>        G = 0x81ba2d8
>        own_the_options = 1
>#21 was_main () at layer5/main.c:2006
>        options = <optimized out>
>#22 0xb6c9025f in CmdRunPyMOL (self=0x816f7b8, args=0x8151acc) at layer4/Cmd.c:4771
>        block_input_hook = 0
>#23 0xb7611daf in PyCFunction_Call (func=0x81f39cc, arg=0x8151acc, kw=0x0) at /usr/src/debug/Python-2.7.3/Objects/methodobject.c:116
>        f = 0x81f39cc
>        meth = 0xb6c901e0 <CmdRunPyMOL>
>        self = <optimized out>
>        size = <optimized out>
>#24 0xb76713ba in call_function (oparg=<optimized out>, pp_stack=0xbfdc42a4) at /usr/src/debug/Python-2.7.3/Python/ceval.c:4098
>        callargs = 0x8151acc
>        flags = 1
>        tstate = <optimized out>
>        func = 0x81f39cc
>        w = <optimized out>
>        na = 135090256
>        nk = <optimized out>
>        n = 2
>        pfunc = 0x8491fa4
>        x = <optimized out>
>#25 PyEval_EvalFrameEx (f=0x8491e64, throwflag=0) at /usr/src/debug/Python-2.7.3/Python/ceval.c:2740
>        sp = 0x8491fa8
>        stack_pointer = <optimized out>
>        next_instr = 0x815b096 "\001d"
>        opcode = <optimized out>
>        oparg = <optimized out>
>        why = WHY_NOT
>        err = 0
>        x = 0x80d5050
>        v = <optimized out>
>        w = <optimized out>
>        u = <optimized out>
>        t = <optimized out>
>        stream = 0x0
>        fastlocals = 0x8491f9c
>        freevars = 0x8491fa4
>        retval = 0x0
>        tstate = 0x80d5050
>        co = 0x8142d58
>        instr_ub = -1
>        instr_lb = 0
>        instr_prev = -1
>        first_instr = 0x815b074 "t"
>        names = 0x8155914
>        consts = 0x81596ac
>#26 0xb76730d2 in PyEval_EvalCodeEx (co=0x8142d58, globals=0xb777335c, locals=0x0, args=0x80f1bb0, argcount=1, kws=0x80f1bb4, kwcount=0, defs=0x8172318, defcount=1, closure=0x0) at /usr/src/debug/Python-2.7.3/Python/ceval.c:3330
>        f = 0x8491e64
>        retval = 0x0
>        fastlocals = 0x8491f9c
>        freevars = 0x8491fa4
>        tstate = 0x80d5050
>        x = <optimized out>
>        u = <optimized out>
>#27 0xb7671082 in fast_function (nk=<optimized out>, na=1, n=1, pp_stack=0xbfdc4404, func=0x84b502c) at /usr/src/debug/Python-2.7.3/Python/ceval.c:4194
>        co = <optimized out>
>        nd = 1
>        globals = 0xb777335c
>        argdefs = <optimized out>
>        d = <optimized out>
>#28 call_function (oparg=<optimized out>, pp_stack=0xbfdc4404) at /usr/src/debug/Python-2.7.3/Python/ceval.c:4119
>        func = 0x84b502c
>        w = <optimized out>
>        na = 1
>        nk = <optimized out>
>        n = 1
>        pfunc = 0x80f1bac
>        x = <optimized out>
>#29 PyEval_EvalFrameEx (f=0x80f1a74, throwflag=0) at /usr/src/debug/Python-2.7.3/Python/ceval.c:2740
>        sp = 0x80f1bb4
>        stack_pointer = <optimized out>
>        next_instr = 0x81aedaa "\001n\250"
>        opcode = <optimized out>
>        oparg = <optimized out>
>        why = WHY_NOT
>        err = 0
>        x = 0x1
>        v = <optimized out>
>        w = <optimized out>
>        u = <optimized out>
>        t = <optimized out>
>        stream = 0x0
>        fastlocals = 0x80f1bac
>        freevars = 0x80f1bac
>        retval = 0x0
>        tstate = 0x80d5050
>        co = 0x8142f08
>        instr_ub = -1
>        instr_lb = 0
>        instr_prev = -1
>        first_instr = 0x81ae7d4 "d"
>        names = 0x817c1a4
>        consts = 0xb777aa4c
>#30 0xb76730d2 in PyEval_EvalCodeEx (co=0x8142f08, globals=0xb777335c, locals=0xb777335c, args=0x0, argcount=0, kws=0x0, kwcount=0, defs=0x0, defcount=0, closure=0x0) at /usr/src/debug/Python-2.7.3/Python/ceval.c:3330
>        f = 0x80f1a74
>        retval = 0x0
>        fastlocals = 0x80f1bac
>        freevars = 0x80f1bac
>        tstate = 0x80d5050
>        x = <optimized out>
>        u = <optimized out>
>#31 0xb7673244 in PyEval_EvalCode (co=0x8142f08, globals=0xb777335c, locals=0xb777335c) at /usr/src/debug/Python-2.7.3/Python/ceval.c:689
>No locals.
>#32 0xb768cfdd in run_mod (mod=<optimized out>, filename=<optimized out>, globals=0xb777335c, locals=0xb777335c, flags=0xbfdc46bc, arena=0x817c0c8) at /usr/src/debug/Python-2.7.3/Python/pythonrun.c:1361
>        co = 0x8142f08
>        v = <optimized out>
>#33 0xb768df9e in PyRun_FileExFlags (fp=0x817c198, filename=0xbfdc572c "/usr/lib/python2.7/site-packages/pymol/__init__.py", start=257, globals=0xb777335c, locals=0xb777335c, closeit=1, flags=0xbfdc46bc) at /usr/src/debug/Python-2.7.3/Python/pythonrun.c:1347
>        ret = <optimized out>
>        mod = 0x8232ac0
>        arena = 0x817c0c8
>#34 0xb768eb8a in PyRun_SimpleFileExFlags (fp=0x817c198, filename=0xbfdc572c "/usr/lib/python2.7/site-packages/pymol/__init__.py", closeit=1, flags=0xbfdc46bc) at /usr/src/debug/Python-2.7.3/Python/pythonrun.c:951
>        m = <optimized out>
>        d = 0xb777335c
>        v = <optimized out>
>        ext = <optimized out>
>        set_file_name = 1
>        ret = <optimized out>
>        len = <optimized out>
>#35 0xb768f85c in PyRun_AnyFileExFlags (fp=0x817c198, filename=0xbfdc572c "/usr/lib/python2.7/site-packages/pymol/__init__.py", closeit=1, flags=0xbfdc46bc) at /usr/src/debug/Python-2.7.3/Python/pythonrun.c:755
>No locals.
>#36 0xb76a0fc4 in Py_Main (argc=2, argv=0xbfdc4794) at /usr/src/debug/Python-2.7.3/Modules/main.c:639
>        c = <optimized out>
>        sts = -1
>        command = 0x0
>        filename = 0xbfdc572c "/usr/lib/python2.7/site-packages/pymol/__init__.py"
>        module = 0x0
>        fp = 0x817c198
>        p = <optimized out>
>        unbuffered = 0
>        skipfirstline = 0
>        stdin_is_interactive = 0
>        help = -1076078804
>        version = -1217137028
>        saw_unbuffered_flag = 1
>        cf = {cf_flags = 0}
>#37 0x08048508 in main (argc=2, argv=0xbfdc4794) at /usr/src/debug/Python-2.7.3/Modules/python.c:23
>No locals.
>From        To          Syms Read   Shared Object Library
>0xb75c9b90  0xb76b86e8  Yes         /usr/lib/libpython2.7.so.1.0
>0xb7592680  0xb759e6f8  Yes         /lib/libpthread.so.0
>0xb7589a60  0xb758aa88  Yes         /lib/libdl.so.2
>0xb7585a20  0xb7586448  Yes         /lib/libutil.so.1
>0xb755d420  0xb75783a8  Yes         /lib/libm.so.6
>0xb73c1e90  0xb74fa294  Yes         /lib/libc.so.6
>0xb7785850  0xb779eedf  Yes         /lib/ld-linux.so.2
>0xb7165030  0xb7166258  Yes         /usr/lib/python2.7/lib-dynload/timemodule.so
>0xb715dda0  0xb71607e8  Yes         /usr/lib/python2.7/lib-dynload/stropmodule.so
>0xb71563f0  0xb7159668  Yes         /usr/lib/python2.7/lib-dynload/math.so
>0xb6a86460  0xb6ccb238  Yes         /usr/lib/python2.7/site-packages/pymol/_cmd.so
>0xb69a1a70  0xb69e9c58  Yes         /usr/lib/libGL.so.1
>0xb69198e0  0xb6974148  Yes         /usr/lib/libGLU.so.1
>0xb68e96b0  0xb68fa98c  Yes         /usr/lib/libglut.so.3
>0xb68b9740  0xb68d5d38  Yes         /usr/lib/libpng12.so.0
>0xb68a1670  0xb68ae948  Yes         /lib/libz.so.1
>0xb680a570  0xb6877558  Yes         /usr/lib/libfreetype.so.6
>0xb67d0590  0xb67eee1c  Yes         /usr/lib/libGLEW.so.1.6
>0xb6704e60  0xb6778618  Yes         /usr/lib/libstdc++.so.6
>0xb66a3f30  0xb66bac48  Yes         /lib/libgcc_s.so.1
>0xb657d310  0xb660dfbc  Yes         /usr/lib/libX11.so.6
>0xb6558800  0xb6563848  Yes         /usr/lib/libXext.so.6
>0xb65537c0  0xb65541fc  Yes         /usr/lib/libXdamage.so.1
>0xb654eed0  0xb655164c  Yes         /usr/lib/libXfixes.so.3
>0xb6549ad0  0xb654c69c  Yes         /usr/lib/libXxf86vm.so.1
>0xb653e530  0xb65441d8  Yes         /usr/lib/libdrm.so.2
>0xb652d7d0  0xb6537a08  Yes         /usr/lib/libXi.so.6
>0xb6514ec0  0xb652473c  Yes         /usr/lib/libxcb.so.1
>0xb6505920  0xb6509a98  Yes         /lib/librt.so.1
>0xb6501a00  0xb650288c  Yes         /usr/lib/libXau.so.6
>0xb6a50730  0xb6a53698  Yes         /usr/lib/python2.7/lib-dynload/_struct.so
>0xb6a4aa10  0xb6a4cd88  Yes         /usr/lib/python2.7/lib-dynload/binascii.so
>0xb6a46f40  0xb6a47f88  Yes         /usr/lib/python2.7/lib-dynload/cStringIO.so
>0xb6a36590  0xb6a416e8  Yes         /usr/lib/python2.7/lib-dynload/cPickle.so
>0xb6a30d20  0xb6a31ba8  Yes         /usr/lib/python2.7/lib-dynload/_hashlib.so
>0xb6474f90  0xb64acad8  Yes         /usr/lib/libssl.so.10
>0xb6315f00  0xb63feca8  Yes         /lib/libcrypto.so.10
>0xb62a3610  0xb62d30c8  Yes         /lib/libgssapi_krb5.so.2
>0xb61d32b0  0xb6251a38  Yes         /lib/libkrb5.so.3
>0xb6a2ce30  0xb6a2db7c  Yes         /lib/libcom_err.so.2
>0xb6199c20  0xb61b47d8  Yes         /lib/libk5crypto.so.3
>0xb617e670  0xb618f068  Yes         /lib/libresolv.so.2
>0xb6172d90  0xb61782d8  Yes         /lib/libkrb5support.so.0
>0xb616ec60  0xb616f9b8  Yes         /lib/libkeyutils.so.1
>0xb61526e0  0xb6164478  Yes         /lib/libselinux.so.1
>0xb6a29bb0  0xb6a2a858  Yes         /usr/lib/python2.7/lib-dynload/_randommodule.so
>0xb6a220d0  0xb6a24428  Yes         /usr/lib/python2.7/lib-dynload/operator.so
>0xb6086cc0  0xb6088f28  Yes         /usr/lib/python2.7/lib-dynload/zlibmodule.so
>0xb60692c0  0xb60797f8  Yes         /usr/lib/python2.7/lib-dynload/_io.so
>0xb6062950  0xb6063818  Yes         /usr/lib/python2.7/lib-dynload/fcntlmodule.so
>0xb5cc0a00  0xb5f14bf8  Yes         /usr/lib/dri/i915_dri.so
>0xb5c45140  0xb5c5ebb8  Yes         /lib/libexpat.so.1
>0xb5c25ea0  0xb5c38db8  Yes         /usr/lib/libdrm_intel.so.1
>0xb5c1b860  0xb5c20b0c  Yes         /usr/lib/libpciaccess.so.0
>0xb6a1b4b0  0xb6a1dda8  Yes         /usr/lib/python2.7/lib-dynload/_collectionsmodule.so
>0xb64f57e0  0xb64fa778  Yes         /usr/lib/python2.7/lib-dynload/itertoolsmodule.so
>0xb64f16f0  0xb64f1e18  Yes         /usr/lib/python2.7/lib-dynload/_bisectmodule.so
>0xb64ed820  0xb64ee988  Yes         /usr/lib/python2.7/lib-dynload/_heapq.so
>0xb64e3850  0xb64e9968  Yes         /usr/lib/python2.7/lib-dynload/_tkinter.so
>0xb4d6cba0  0xb4d9c78c  Yes         /usr/lib/tcl8.5/libTix.so
>0xb4c44e50  0xb4d26dc8  Yes         /usr/lib/libtk8.5.so
>0xb4b25ab0  0xb4bf7438  Yes         /usr/lib/libtcl8.5.so
>0xb64cef20  0xb64dd01c  Yes         /usr/lib/libXft.so.2
>0xb4ae2010  0xb4afd63c  Yes         /usr/lib/libfontconfig.so.1
>0xb4ad5300  0xb4adb4fc  Yes         /usr/lib/libXrender.so.1
>0xb42c7a10  0xb42cf158  Yes         /lib/libnss_files.so.2
>0xb64bfd20  0xb64c6258  Yes         /usr/lib/python2.7/lib-dynload/_socketmodule.so
>0xb5cada90  0xb5cae598  Yes         /usr/lib/python2.7/lib-dynload/_functoolsmodule.so
>0xb5ca7200  0xb5caa1f8  Yes         /usr/lib/python2.7/lib-dynload/_ssl.so
>0xb3a5ae70  0xb3a6035c  Yes         /usr/lib/libXcursor.so.1
>0xb3aa11a0  0xb3aa2ed8  Yes         /usr/lib/python2.7/lib-dynload/selectmodule.so
>$1 = 0x0
>No symbol "__glib_assert_msg" in current context.
>eax            0xb6802890	-1233114992
>ecx            0x8c164d4	146891988
>edx            0x3b6c	15212
>ebx            0xb6d2c570	-1227700880
>esp            0xbfdc326c	0xbfdc326c
>ebp            0xbfdc341c	0xbfdc341c
>esi            0x8842370	142877552
>edi            0x0	0
>eip            0x0	0
>eflags         0x210202	[ IF RF ID ]
>cs             0x73	115
>ss             0x7b	123
>ds             0x7b	123
>es             0x7b	123
>fs             0x0	0
>gs             0x33	51
>No function contains program counter for selected frame.

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Attachments on bug 852237: 607364 | 607365 | 607366