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Red Hat Bugzilla – Attachment 613282 Details for
Bug 857655
[abrt] R-core-2.15.1-1.fc17: rl_free_undo_list: Process /usr/lib64/R/bin/exec/R was killed by signal 6 (SIGABRT)
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File: backtrace
backtrace (text/plain), 8.53 KB, created by
Andrej Podzimek
on 2012-09-15 15:34:35 UTC
(
hide
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Description:
File: backtrace
Filename:
MIME Type:
Creator:
Andrej Podzimek
Created:
2012-09-15 15:34:35 UTC
Size:
8.53 KB
patch
obsolete
>[New LWP 17449] >[Thread debugging using libthread_db enabled] >Using host libthread_db library "/lib64/libthread_db.so.1". >warning: "/usr/lib/debug/usr/lib64/libicudata.so.48.1.1.debug": separate debug info file has no debug info >Core was generated by `/usr/lib64/R/bin/exec/R'. >Program terminated with signal 6, Aborted. >#0 0x0000003605c35925 in __GI_raise (sig=sig@entry=6) at ../nptl/sysdeps/unix/sysv/linux/raise.c:64 >64 return INLINE_SYSCALL (tgkill, 3, pid, selftid, sig); > >Thread 1 (Thread 0x7f1c1d9a87c0 (LWP 17449)): >#0 0x0000003605c35925 in __GI_raise (sig=sig@entry=6) at ../nptl/sysdeps/unix/sysv/linux/raise.c:64 > resultvar = 0 > pid = 17449 > selftid = 17449 >#1 0x0000003605c370d8 in __GI_abort () at abort.c:91 > save_stage = 2 > act = {__sigaction_handler = {sa_handler = 0x7fff7e9ce08a, sa_sigaction = 0x7fff7e9ce08a}, sa_mask = {__val = {6, 232026240323, 2, 140735317598366, 2, 232026233636, 1, 232026240319, 3, 140735317598342, 10, 232026240323, 2, 140735317599152, 12, 140735317600912}}, sa_flags = 96, sa_restorer = 0x7} > sigs = {__val = {32, 0 <repeats 15 times>}} >#2 0x0000003605c74e6b in __libc_message (do_abort=do_abort@entry=2, fmt=fmt@entry=0x3605d78908 "*** glibc detected *** %s: %s: 0x%s ***\n") at ../sysdeps/unix/sysv/linux/libc_fatal.c:198 > ap = {{gp_offset = 40, fp_offset = 48, overflow_arg_area = 0x7fff7e9ceaa0, reg_save_area = 0x7fff7e9ce9b0}} > ap_copy = {{gp_offset = 16, fp_offset = 48, overflow_arg_area = 0x7fff7e9ceaa0, reg_save_area = 0x7fff7e9ce9b0}} > fd = 3 > on_2 = <optimized out> > list = <optimized out> > nlist = <optimized out> > cp = <optimized out> > written = <optimized out> >#3 0x0000003605c7bfee in malloc_printerr (ptr=0x1f313a0, str=0x3605d76795 "free(): invalid pointer", action=3) at malloc.c:5027 > buf = "0000000001f313a0" > cp = <optimized out> >#4 _int_free (av=0x3605fb0720, p=0x1f31390, have_lock=0) at malloc.c:3948 > size = <optimized out> > fb = <optimized out> > nextchunk = <optimized out> > nextsize = <optimized out> > nextinuse = <optimized out> > prevsize = <optimized out> > bck = <optimized out> > fwd = <optimized out> > errstr = <optimized out> > locked = <optimized out> >#5 0x00000036088298c8 in rl_free_undo_list () at ../undo.c:119 > release = 0x1f313a0 > orig_list = 0x10c2d80 >#6 0x0000003608815463 in readline_internal_teardown (eof=0) at ../readline.c:489 > entry = <optimized out> >#7 0x000000360882adfc in rl_callback_read_char () at ../callback.c:212 > line = <optimized out> > eof = <optimized out> > jcode = <optimized out> > olevel = {{__jmpbuf = {232073213104, -3347515035214470080, 232059003632, 4294967295, 232059959972, 232059959968, 3321915715102123072, -3347515354200071104}, __mask_was_saved = 1, __saved_mask = {__val = {0 <repeats 16 times>}}}} >#8 0x00000036079bb5c9 in Rstd_ReadConsole (prompt=<optimized out>, buf=0x7fff7e9cfcbc "", len=4096, addtohistory=<optimized out>) at sys-std.c:930 > what = <optimized out> > wt = <optimized out> > rl_data = {readline_gotaline = 0, readline_addtohistory = 1, readline_len = 4096, readline_eof = 0, readline_buf = 0x7fff7e9cfcbc "", prev = 0x7fff7e9cec00} >#9 0x0000003607914912 in Rf_ReplIteration (rho=rho@entry=0xf33750, savestack=savestack@entry=0, browselevel=browselevel@entry=0, state=state@entry=0x7fff7e9cfcb0) at main.c:207 > c = <optimized out> > value = <optimized out> > thisExpr = <optimized out> > wasDisplayed = FALSE >#10 0x0000003607914cb0 in R_ReplConsole (rho=0xf33750, savestack=savestack@entry=0, browselevel=browselevel@entry=0) at main.c:305 > status = <optimized out> > state = {status = PARSE_NULL, prompt_type = 1, browselevel = 0, buf = '\000' <repeats 4096 times>, bufp = 0x7fff7e9cfcbc ""} >#11 0x00000036079151d0 in run_Rmainloop () at main.c:987 >No locals. >#12 0x00000036079151f2 in Rf_mainloop () at main.c:994 >No locals. >#13 0x00000000004007cb in main (ac=<optimized out>, av=<optimized out>) at Rmain.c:32 >No locals. >From To Syms Read Shared Object Library >0x00000036078387d0 0x0000003607a2926c Yes /usr/lib64/R/lib/libR.so >0x0000003607e012d0 0x0000003607e2a050 Yes /usr/lib64/R/lib/libRblas.so >0x0000003620003720 0x000000362000aaf0 Yes /lib64/libgomp.so.1 >0x0000003606805790 0x0000003606810494 Yes /lib64/libpthread.so.0 >0x0000003605c1ef60 0x0000003605d5f780 Yes /lib64/libc.so.6 >0x00000036082189f0 0x00000036082f2a00 Yes /lib64/libgfortran.so.3 >0x00000036060055f0 0x000000360606ca4c Yes /lib64/libm.so.6 >0x0000003607402360 0x0000003607422834 Yes /lib64/libquadmath.so.0 >0x0000003608814f20 0x0000003608833848 Yes /lib64/libreadline.so.6 >0x0000003617601da0 0x0000003617642988 Yes /lib64/libpcre.so.0 >0x000000360ec016f0 0x000000360ec0d2c0 Yes /lib64/libbz2.so.1 >0x0000003605801f50 0x000000360580e718 Yes /lib64/libz.so.1 >0x0000003606c02260 0x0000003606c0554c Yes /lib64/librt.so.1 >0x0000003606400ea0 0x00000036064019e0 Yes /lib64/libdl.so.2 >0x000000360bc480b0 0x000000360bcfd574 Yes /lib64/libicuuc.so.48 >0x000000360c4680b0 0x000000360c56cba4 Yes /lib64/libicui18n.so.48 >0x00000036070029d0 0x0000003607012148 Yes /lib64/libgcc_s.so.1 >0x0000003605400b20 0x000000360541a319 Yes /lib64/ld-linux-x86-64.so.2 >0x000000360e40cd90 0x000000360e418c48 Yes /lib64/libtinfo.so.5 >0x0000003618600570 0x0000003618600670 Yes (*) /lib64/libicudata.so.48 >0x000000360905baf0 0x00000036090c13ab Yes /lib64/libstdc++.so.6 >0x00007f1c170ea1b0 0x00007f1c170f167c Yes /lib64/libnss_files.so.2 >0x00007f1c16e4c090 0x00007f1c16e4f118 Yes /usr/lib64/R/library/methods/libs/methods.so >0x00007f1c1689c550 0x00007f1c168b3a4c Yes /usr/lib64/R/library/grDevices/libs/grDevices.so >0x00007f1c164c19b0 0x00007f1c16520490 Yes /usr/lib64/R/library/stats/libs/stats.so >0x00007f1c1614f900 0x00007f1c162ae5c4 Yes /usr/lib64/R/lib/libRlapack.so >0x00007f1c15f427b0 0x00007f1c15f4417c Yes /usr/lib64/R/library/tools/libs/tools.so >(*): Shared library is missing debugging information. >$1 = 0x7f1c1d9d2000 "" >No symbol "__glib_assert_msg" in current context. >rax 0x0 0 >rbx 0x400 1024 >rcx 0xffffffffffffffff -1 >rdx 0x6 6 >rsi 0x4429 17449 >rdi 0x4429 17449 >rbp 0x7fff7e9cea90 0x7fff7e9cea90 >rsp 0x7fff7e9ce058 0x7fff7e9ce058 >r8 0x3605d6f300 232026206976 >r9 0xc 12 >r10 0x8 8 >r11 0x202 514 >r12 0x4 4 >r13 0x7 7 >r14 0x7 7 >r15 0x7fff7e9ce200 140735317598720 >rip 0x3605c35925 0x3605c35925 <__GI_raise+53> >eflags 0x202 [ IF ] >cs 0x33 51 >ss 0x2b 43 >ds 0x0 0 >es 0x0 0 >fs 0x0 0 >gs 0x0 0 >Dump of assembler code for function __GI_raise: > 0x0000003605c358f0 <+0>: mov %fs:0x2d4,%eax > 0x0000003605c358f8 <+8>: mov %fs:0x2d0,%esi > 0x0000003605c35900 <+16>: test %esi,%esi > 0x0000003605c35902 <+18>: jne 0x3605c35930 <__GI_raise+64> > 0x0000003605c35904 <+20>: mov $0xba,%eax > 0x0000003605c35909 <+25>: syscall > 0x0000003605c3590b <+27>: mov %eax,%esi > 0x0000003605c3590d <+29>: mov %eax,%fs:0x2d0 > 0x0000003605c35915 <+37>: movslq %edi,%rdx > 0x0000003605c35918 <+40>: movslq %esi,%rsi > 0x0000003605c3591b <+43>: movslq %eax,%rdi > 0x0000003605c3591e <+46>: mov $0xea,%eax > 0x0000003605c35923 <+51>: syscall >=> 0x0000003605c35925 <+53>: cmp $0xfffffffffffff000,%rax > 0x0000003605c3592b <+59>: ja 0x3605c3593f <__GI_raise+79> > 0x0000003605c3592d <+61>: repz retq > 0x0000003605c3592f <+63>: nop > 0x0000003605c35930 <+64>: test %eax,%eax > 0x0000003605c35932 <+66>: jg 0x3605c35915 <__GI_raise+37> > 0x0000003605c35934 <+68>: test $0x7fffffff,%eax > 0x0000003605c35939 <+73>: je 0x3605c35950 <__GI_raise+96> > 0x0000003605c3593b <+75>: neg %eax > 0x0000003605c3593d <+77>: jmp 0x3605c35915 <__GI_raise+37> > 0x0000003605c3593f <+79>: mov 0x37a4ea(%rip),%rdx # 0x3605fafe30 > 0x0000003605c35946 <+86>: neg %eax > 0x0000003605c35948 <+88>: mov %eax,%fs:(%rdx) > 0x0000003605c3594b <+91>: or $0xffffffffffffffff,%rax > 0x0000003605c3594f <+95>: retq > 0x0000003605c35950 <+96>: mov %esi,%eax > 0x0000003605c35952 <+98>: jmp 0x3605c35915 <__GI_raise+37> >End of assembler dump.
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