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Red Hat Bugzilla – Attachment 624318 Details for
Bug 864702
[abrt] gnomad2-2.9.6-3.fc17: destroy_metadata_t: Process /usr/bin/gnomad2 was killed by signal 11 (SIGSEGV)
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File: backtrace
backtrace (text/plain), 14.13 KB, created by
Fred Weigel
on 2012-10-09 23:15:56 UTC
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Description:
File: backtrace
Filename:
MIME Type:
Creator:
Fred Weigel
Created:
2012-10-09 23:15:56 UTC
Size:
14.13 KB
patch
obsolete
>[New LWP 3177] >[New LWP 3125] >[Thread debugging using libthread_db enabled] >Using host libthread_db library "/lib64/libthread_db.so.1". >Core was generated by `gnomad2'. >Program terminated with signal 11, Segmentation fault. >#0 __GI___libc_free (mem=0x1c0002301dda533) at malloc.c:2973 >2973 if (chunk_is_mmapped(p)) /* release mmapped memory. */ > >Thread 2 (Thread 0x7f82539df980 (LWP 3125)): >#0 0x000000376a0e8bcf in __GI___poll (fds=fds@entry=0x7fff7dc41850, nfds=nfds@entry=1, timeout=timeout@entry=-1) at ../sysdeps/unix/sysv/linux/poll.c:87 > resultvar = <optimized out> > oldtype = 0 > result = <optimized out> >#1 0x000000376c809f22 in _xcb_conn_wait (c=c@entry=0x1caca70, cond=cond@entry=0x1cadb40, vector=vector@entry=0x7fff7dc41898, count=count@entry=0x7fff7dc41894) at xcb_conn.c:400 > ret = <optimized out> > fd = {fd = 3, events = 5, revents = 0} >#2 0x000000376c80a457 in _xcb_out_send (c=c@entry=0x1caca70, vector=0x7fff7dc41910, count=3) at xcb_out.c:345 > ret = <optimized out> >#3 0x000000376c80a5c3 in xcb_writev (c=c@entry=0x1caca70, vector=vector@entry=0x7fff7dc41910, count=count@entry=3, requests=requests@entry=95) at xcb_out.c:293 > ret = <optimized out> >#4 0x000000376bc42d3e in _XSend (dpy=dpy@entry=0x1cab820, data=data@entry=0x0, size=size@entry=0) at xcb_io.c:494 > dummy_request = {reqType = 0 '\000', data = 0 '\000', length = 0} > pad = "\000\000" > vec = {{iov_base = 0x1cb2060, iov_len = 10156}, {iov_base = 0x0, iov_len = 0}, {iov_base = 0x376bf39780, iov_len = 0}} > requests = 95 > ext = 0x0 > c = 0x1caca70 >#5 0x000000376bc43095 in _XFlush (dpy=dpy@entry=0x1cab820) at xcb_io.c:511 >No locals. >#6 0x000000376bc245fa in XFlush (dpy=0x1cab820) at Flush.c:39 >No locals. >#7 0x000000377685339d in IA__gdk_display_flush (display=<optimized out>) at gdkdisplay-x11.c:746 > __PRETTY_FUNCTION__ = "IA__gdk_display_flush" >#8 0x0000003776842410 in flush_all_displays () at gdkwindow.c:5634 > displays = 0x1e33f80 > tmp_list = 0x1e33f80 >#9 IA__gdk_window_process_all_updates () at gdkwindow.c:5705 > old_update_windows = 0x1e3d420 > tmp_list = <optimized out> > in_process_all_updates = 1 > got_recursive_update = 0 >#10 0x00000037768424b9 in gdk_window_update_idle (data=<optimized out>) at gdkwindow.c:5322 >No locals. >#11 0x000000377681eb97 in gdk_threads_dispatch (data=0x20138a0) at gdk.c:512 > dispatch = 0x20138a0 > ret = 0 >#12 0x000000376cc47825 in g_main_dispatch (context=0x1cc18e0) at gmain.c:2539 > dispatch = 0x376cc45580 <g_idle_dispatch> > was_in_call = 0 > user_data = 0x20138a0 > callback = 0x377681eb40 <gdk_threads_dispatch> > cb_funcs = 0x376cf1e980 > cb_data = 0x1df5f90 > current_source_link = {data = 0x1e27990, next = 0x0} > need_destroy = <optimized out> > source = 0x1e27990 > current = 0x1e32eb0 > i = <optimized out> >#13 g_main_context_dispatch (context=context@entry=0x1cc18e0) at gmain.c:3075 >No locals. >#14 0x000000376cc47b58 in g_main_context_iterate (context=0x1cc18e0, block=block@entry=1, dispatch=dispatch@entry=1, self=<optimized out>) at gmain.c:3146 > max_priority = 120 > timeout = 0 > some_ready = 1 > nfds = <optimized out> > allocated_nfds = <optimized out> > fds = 0x1eccf20 >#15 0x000000376cc47f52 in g_main_loop_run (loop=0x1dbc7e0) at gmain.c:3340 > __PRETTY_FUNCTION__ = "g_main_loop_run" >#16 0x000000377714ac57 in IA__gtk_main () at gtkmain.c:1257 > tmp_list = 0x0 > functions = 0x0 > init = <optimized out> > loop = 0x1dbc7e0 >#17 0x000000000040a79f in main (argc=1, argv=0x7fff7dc41cb8) at gnomad2.c:595 > cProgramName = "gnomad2 2.9.6" > menu = 0x1ea43a0 > menu_bar = 0x1cc2d30 > root_menu = 0x1ea5ba0 > menu_item = <optimized out> > music_panel = <optimized out> > data_panel = <optimized out> > vbox = <optimized out> > prefshbox = 0x1cfb1f0 > notebook = <optimized out> > label = 0x1eadba0 > accel_group = 0x1cc4580 > opt = <optimized out> > icon_load_error = 0x0 > >Thread 1 (Thread 0x7f82458ec700 (LWP 3177)): >#0 __GI___libc_free (mem=0x1c0002301dda533) at malloc.c:2973 > ar_ptr = <optimized out> > p = <optimized out> > hook = 0 >#1 0x000000376cc4d50f in g_free (mem=0x1c0002301dda533) at gmem.c:252 >No locals. >#2 0x0000000000421461 in destroy_metadata_t (meta=0x1eae040) at metadata.c:47 >No locals. >#3 0x0000000000421e88 in destroy_metalist (metalist=metalist@entry=0x20220c0) at metadata.c:399 > meta = <optimized out> > tmplist = 0x20220c0 >#4 0x0000000000412508 in jb2hd_data_thread (thread_args=0x2018dc0) at jukebox.c:2075 > args = 0x2018dc0 > metalist = <optimized out> >#5 0x000000376cc6a495 in g_thread_proxy (data=0x1e40590) at gthread.c:801 > thread = 0x1e40590 >#6 0x000000376ac07d14 in start_thread (arg=0x7f82458ec700) at pthread_create.c:309 > __res = <optimized out> > pd = 0x7f82458ec700 > now = <optimized out> > unwind_buf = {cancel_jmp_buf = {{jmp_buf = {140197489460992, -7638314709468836662, 0, 31574336, 140197489460992, 18, 7708977429109804234, -7669185149978407734}, mask_was_saved = 0}}, priv = {pad = {0x0, 0x0, 0x0, 0x0}, data = {prev = 0x0, cleanup = 0x0, canceltype = 0}}} > not_first_call = 0 > pagesize_m1 = <optimized out> > sp = <optimized out> > freesize = <optimized out> >#7 0x000000376a0f167d in clone () at ../sysdeps/unix/sysv/linux/x86_64/clone.S:115 >No locals. >From To Syms Read Shared Object Library >0x000000376d400680 0x000000376d4007fc Yes /lib64/libgthread-2.0.so.0 >0x000000376b002260 0x000000376b00554c Yes /lib64/librt.so.1 >0x0000003770406180 0x0000003770421298 Yes /lib64/libnjb.so.5 >0x0000003778801710 0x0000003778803284 Yes /lib64/libusb-0.1.so.4 >0x0000003777069a90 0x000000377730b4f8 Yes /lib64/libgtk-x11-2.0.so.0 >0x000000377681e7c0 0x00000037768810b4 Yes /lib64/libgdk-x11-2.0.so.0 >0x0000003774409b30 0x0000003774415c04 Yes /lib64/libatk-1.0.so.0 >0x000000376e82eee0 0x000000376e8eaaf4 Yes /lib64/libgio-2.0.so.0 >0x0000003773007600 0x0000003773021bfc Yes /lib64/libpangoft2-1.0.so.0 >0x0000003773c04910 0x0000003773c09358 Yes /lib64/libpangocairo-1.0.so.0 >0x0000003772006750 0x0000003772019b50 Yes /lib64/libgdk_pixbuf-2.0.so.0 >0x000000377340b2f0 0x000000377348215c Yes /lib64/libcairo.so.2 >0x000000377380eeb0 0x000000377382d490 Yes /lib64/libpango-1.0.so.0 > No /usr/lib64/freetype-freeworld/libfreetype.so.6 >0x0000003770005ef0 0x000000377001f6fc Yes /lib64/libfontconfig.so.1 >0x000000376dc0a910 0x000000376dc37dbc Yes /lib64/libgobject-2.0.so.0 >0x000000376cc19d00 0x000000376ccac9cc Yes /lib64/libglib-2.0.so.0 >0x0000003774806dc0 0x0000003774810a58 Yes /lib64/libid3tag.so.0 >0x000000376ec10860 0x000000376ec342c8 Yes /lib64/libmtp.so.9 >0x0000003775001b20 0x0000003775002784 Yes /lib64/libtag_c.so.0 >0x0000003780003830 0x000000378000690c Yes /lib64/libgudev-1.0.so.0 >0x000000376ac05790 0x000000376ac10494 Yes /lib64/libpthread.so.0 >0x000000376a01ef60 0x000000376a15f780 Yes /lib64/libc.so.6 >0x0000003769c00b20 0x0000003769c1a319 Yes /lib64/ld-linux-x86-64.so.2 >0x000000377f802a00 0x000000377f80a588 Yes /lib64/libusb-1.0.so.0 >0x000000376e4010f0 0x000000376e401fd8 Yes /lib64/libgmodule-2.0.so.0 >0x000000376bc1dea0 0x000000376bca4260 Yes /lib64/libX11.so.6 >0x000000376f8014f0 0x000000376f803cf8 Yes /lib64/libXfixes.so.3 >0x000000376a4055f0 0x000000376a46ca4c Yes /lib64/libm.so.6 >0x000000376d003700 0x000000376d00d7d0 Yes /lib64/libXext.so.6 >0x0000003770801a70 0x00000037708079e0 Yes /lib64/libXrender.so.1 >0x0000003771000b00 0x0000003771001438 Yes /lib64/libXinerama.so.1 >0x0000003771c02130 0x0000003771c0bfb4 Yes /lib64/libXi.so.6 >0x0000003771801830 0x0000003771805f34 Yes /lib64/libXrandr.so.2 >0x0000003772802a80 0x00000037728076dc Yes /lib64/libXcursor.so.1 >0x0000003774000c30 0x0000003774001774 Yes /lib64/libXcomposite.so.1 >0x0000003771400b90 0x000000377140159c Yes /lib64/libXdamage.so.1 >0x000000376d801950 0x000000376d8060ec Yes /lib64/libffi.so.5 >0x000000376a800ea0 0x000000376a8019e0 Yes /lib64/libdl.so.2 >0x000000376b401f50 0x000000376b40e718 Yes /lib64/libz.so.1 >0x000000376b805fc0 0x000000376b816768 Yes /lib64/libselinux.so.1 >0x000000376c0039b0 0x000000376c011e1c Yes /lib64/libresolv.so.2 >0x000000376f004fa0 0x000000376f020ae0 Yes /lib64/libpng15.so.15 >0x0000003772c08d80 0x0000003772c72eec Yes /lib64/libpixman-1.so.0 >0x000000376f403dd0 0x000000376f41cccc Yes /lib64/libexpat.so.1 >0x0000003770c35eb0 0x0000003770c75b20 Yes /lib64/libtag.so.1 >0x000000377245bb50 0x00000037724c105b Yes /lib64/libstdc++.so.6 >0x000000376e0029d0 0x000000376e012138 Yes /lib64/libgcc_s.so.1 >0x000000377cc02ef0 0x000000377cc0a2d6 Yes /lib64/libudev.so.0 >0x000000376c8099c0 0x000000376c815878 Yes /lib64/libxcb.so.1 >0x000000376c400e80 0x000000376c401bb0 Yes /lib64/libXau.so.6 >0x00007f824d3821b0 0x00007f824d38967c Yes /lib64/libnss_files.so.2 >0x00007f824d159b10 0x00007f824d17a6d8 Yes /usr/lib64/gtk-2.0/2.10.0/engines/libclearlooks.so >0x00007f8246006930 0x00007f824601df98 Yes /usr/lib64/gio/modules/libgvfsdbus.so >0x00007f8245dc8310 0x00007f8245dd1c9c Yes /lib64/libgvfscommon.so.0 >0x00007f8245b94ec0 0x00007f8245bb41fc Yes /lib64/libbluray.so.1 >0x00007f8245954890 0x00007f824597d924 Yes /lib64/libdbus-1.so.3 >0x000000377e800ee0 0x000000377e801814 Yes /lib64/libutil.so.1 >0x0000003774c2cd70 0x0000003774d0f744 Yes /lib64/libxml2.so.2 >$1 = 0x0 >$2 = 0x0 >rax 0x0 0 >rbx 0x1c0002301dda533 126100939921532211 >rcx 0x376ac0e04d 238014226509 >rdx 0x0 0 >rsi 0x0 0 >rdi 0x1c0002301dda533 126100939921532211 >rbp 0x20220c0 0x20220c0 >rsp 0x7f82458ebbe8 0x7f82458ebbe8 >r8 0x1cbfc60 30145632 >r9 0xc69 3177 >r10 0x20 32 >r11 0x0 0 >r12 0x7f824012a770 140197397440368 >r13 0x2018dc0 33656256 >r14 0x738 1848 >r15 0x12 18 >rip 0x376a07f97c 0x376a07f97c <__GI___libc_free+28> >eflags 0x10206 [ PF IF RF ] >cs 0x33 51 >ss 0x2b 43 >ds 0x0 0 >es 0x0 0 >fs 0x0 0 >gs 0x0 0 >Dump of assembler code for function __GI___libc_free: > 0x000000376a07f960 <+0>: mov 0x330551(%rip),%rax # 0x376a3afeb8 > 0x000000376a07f967 <+7>: mov (%rax),%rax > 0x000000376a07f96a <+10>: test %rax,%rax > 0x000000376a07f96d <+13>: jne 0x376a07fa32 <__GI___libc_free+210> > 0x000000376a07f973 <+19>: test %rdi,%rdi > 0x000000376a07f976 <+22>: je 0x376a07fa30 <__GI___libc_free+208> >=> 0x000000376a07f97c <+28>: mov -0x8(%rdi),%rax > 0x000000376a07f980 <+32>: lea -0x10(%rdi),%rsi > 0x000000376a07f984 <+36>: test $0x2,%al > 0x000000376a07f986 <+38>: jne 0x376a07f9b0 <__GI___libc_free+80> > 0x000000376a07f988 <+40>: test $0x4,%al > 0x000000376a07f98a <+42>: lea 0x330d8f(%rip),%rdi # 0x376a3b0720 <main_arena> > 0x000000376a07f991 <+49>: je 0x376a07f99f <__GI___libc_free+63> > 0x000000376a07f993 <+51>: mov %rsi,%rax > 0x000000376a07f996 <+54>: and $0xfffffffffc000000,%rax > 0x000000376a07f99c <+60>: mov (%rax),%rdi > 0x000000376a07f99f <+63>: xor %edx,%edx > 0x000000376a07f9a1 <+65>: jmpq 0x376a07b910 <_int_free> > 0x000000376a07f9a6 <+70>: nopw %cs:0x0(%rax,%rax,1) > 0x000000376a07f9b0 <+80>: mov 0x3307dd(%rip),%r11d # 0x376a3b0194 <mp_+52> > 0x000000376a07f9b7 <+87>: test %r11d,%r11d > 0x000000376a07f9ba <+90>: jne 0x376a07f9e8 <__GI___libc_free+136> > 0x000000376a07f9bc <+92>: cmp 0x3307ad(%rip),%rax # 0x376a3b0170 <mp_+16> > 0x000000376a07f9c3 <+99>: jbe 0x376a07f9e8 <__GI___libc_free+136> > 0x000000376a07f9c5 <+101>: cmp $0x2000000,%rax > 0x000000376a07f9cb <+107>: ja 0x376a07f9e8 <__GI___libc_free+136> > 0x000000376a07f9cd <+109>: and $0xfffffffffffffff8,%rax > 0x000000376a07f9d1 <+113>: lea (%rax,%rax,1),%rdx > 0x000000376a07f9d5 <+117>: mov %rax,0x330794(%rip) # 0x376a3b0170 <mp_+16> > 0x000000376a07f9dc <+124>: mov %rdx,0x33077d(%rip) # 0x376a3b0160 <mp_> > 0x000000376a07f9e3 <+131>: jmp 0x376a07f9ec <__GI___libc_free+140> > 0x000000376a07f9e5 <+133>: nopl (%rax) > 0x000000376a07f9e8 <+136>: and $0xfffffffffffffff8,%rax > 0x000000376a07f9ec <+140>: mov -0x10(%rdi),%rdx > 0x000000376a07f9f0 <+144>: mov %rsi,%rcx > 0x000000376a07f9f3 <+147>: lea (%rax,%rdx,1),%rsi > 0x000000376a07f9f7 <+151>: mov 0x33042a(%rip),%rax # 0x376a3afe28 > 0x000000376a07f9fe <+158>: sub %rdx,%rcx > 0x000000376a07fa01 <+161>: mov %rsi,%rdx > 0x000000376a07fa04 <+164>: mov 0x18(%rax),%rax > 0x000000376a07fa08 <+168>: or %rcx,%rdx > 0x000000376a07fa0b <+171>: sub $0x1,%rax > 0x000000376a07fa0f <+175>: test %rax,%rdx > 0x000000376a07fa12 <+178>: jne 0x376a07fa38 <__GI___libc_free+216> > 0x000000376a07fa14 <+180>: subl $0x1,0x33076d(%rip) # 0x376a3b0188 <mp_+40> > 0x000000376a07fa1b <+187>: sub %rsi,0x330776(%rip) # 0x376a3b0198 <mp_+56> > 0x000000376a07fa22 <+194>: mov %rcx,%rdi > 0x000000376a07fa25 <+197>: jmpq 0x376a0edfd0 <munmap> > 0x000000376a07fa2a <+202>: nopw 0x0(%rax,%rax,1) > 0x000000376a07fa30 <+208>: repz retq > 0x000000376a07fa32 <+210>: mov (%rsp),%rsi > 0x000000376a07fa36 <+214>: jmpq *%rax > 0x000000376a07fa38 <+216>: mov %rdi,%rdx > 0x000000376a07fa3b <+219>: mov 0x33077f(%rip),%edi # 0x376a3b01c0 <check_action> > 0x000000376a07fa41 <+225>: lea 0xf8ff8(%rip),%rsi # 0x376a178a40 > 0x000000376a07fa48 <+232>: jmpq 0x376a07ad40 <malloc_printerr> >End of assembler dump.
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