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Red Hat Bugzilla – Attachment 892673 Details for
Bug 1094491
openbabel testsuite is failing on ARM
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ARM build.log from https://koji.fedoraproject.org/koji/taskinfo?taskID=6805174
build.log (text/x-log), 1.16 MB, created by
Dominik 'Rathann' Mierzejewski
on 2014-05-05 19:51:52 UTC
(
hide
)
Description:
ARM build.log from https://koji.fedoraproject.org/koji/taskinfo?taskID=6805174
Filename:
MIME Type:
Creator:
Dominik 'Rathann' Mierzejewski
Created:
2014-05-05 19:51:52 UTC
Size:
1.16 MB
patch
obsolete
>Mock Version: 1.1.36 >Mock Version: 1.1.36 >ENTER do(['bash', '--login', '-c', 'rpmbuild -bs --target armv7hl --nodeps builddir/build/SPECS/openbabel.spec'], False, '/var/lib/mock/f21-build-2074221-381782/root/', None, 86400, True, False, 1000, 425, None, False, {'LANG': 'en_US.UTF-8', 'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOSTNAME': 'mock', 'PROMPT_COMMAND': 'echo -n "<mock-chroot>"', 'HOME': '/builddir', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin'}, logger=<mockbuild.trace_decorator.getLog object at 0x1e4de10>) >Executing command: ['bash', '--login', '-c', 'rpmbuild -bs --target armv7hl --nodeps builddir/build/SPECS/openbabel.spec'] with env {'LANG': 'en_US.UTF-8', 'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOSTNAME': 'mock', 'PROMPT_COMMAND': 'echo -n "<mock-chroot>"', 'HOME': '/builddir', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin'} >sh: /usr/bin/python: No such file or directory >sh: /usr/bin/python: No such file or directory >sh: /usr/bin/python: No such file or directory >sh: /usr/bin/python: No such file or directory >sh: /usr/bin/python: No such file or directory >sh: /usr/bin/python: No such file or directory >sh: /usr/bin/python: No such file or directory >warning: Could not canonicalize hostname: arm02-builder05.arm.fedoraproject.org >Building target platforms: armv7hl >Building for target armv7hl >Wrote: /builddir/build/SRPMS/openbabel-2.3.2-4.fc21.src.rpm >Child return code was: 0 >LEAVE do --> > >ENTER do(['bash', '--login', '-c', 'rpmbuild -bb --target armv7hl --nodeps builddir/build/SPECS/openbabel.spec'], False, '/var/lib/mock/f21-build-2074221-381782/root/', None, 86400, True, False, 1000, 425, None, False, {'LANG': 'en_US.UTF-8', 'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOSTNAME': 'mock', 'PROMPT_COMMAND': 'echo -n "<mock-chroot>"', 'HOME': '/builddir', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin'}, logger=<mockbuild.trace_decorator.getLog object at 0x1e4de10>) >Executing command: ['bash', '--login', '-c', 'rpmbuild -bb --target armv7hl --nodeps builddir/build/SPECS/openbabel.spec'] with env {'LANG': 'en_US.UTF-8', 'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOSTNAME': 'mock', 'PROMPT_COMMAND': 'echo -n "<mock-chroot>"', 'HOME': '/builddir', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin'} >Building target platforms: armv7hl >Building for target armv7hl >Executing(%prep): /bin/sh -e /var/tmp/rpm-tmp.DcygTP >+ umask 022 >+ cd /builddir/build/BUILD >+ cd /builddir/build/BUILD >+ rm -rf openbabel-2.3.2 >+ /usr/bin/tar -xf - >+ /usr/bin/gzip -dc /builddir/build/SOURCES/openbabel-2.3.2.tar.gz >+ STATUS=0 >+ '[' 0 -ne 0 ']' >+ cd openbabel-2.3.2 >+ /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w . >+ echo 'Patch #1 (openbabel-rpm.patch):' >Patch #1 (openbabel-rpm.patch): >+ /usr/bin/cat /builddir/build/SOURCES/openbabel-rpm.patch >+ /usr/bin/patch -p1 -b --suffix .rpm --fuzz=0 >patching file scripts/CMakeLists.txt >Hunk #1 succeeded at 252 (offset 1 line). >+ echo 'Patch #2 (openbabel-2.3.2-cmake.patch):' >Patch #2 (openbabel-2.3.2-cmake.patch): >+ /usr/bin/cat /builddir/build/SOURCES/openbabel-2.3.2-cmake.patch >+ /usr/bin/patch -p1 -b --suffix .cmakepol --fuzz=0 >patching file scripts/CMakeLists.txt >+ echo 'Patch #3 (openbabel-tests.patch):' >Patch #3 (openbabel-tests.patch): >+ /usr/bin/patch -p1 -b --suffix .tests --fuzz=0 >+ /usr/bin/cat /builddir/build/SOURCES/openbabel-tests.patch >patching file scripts/python/examples/testpybel.py >patching file test/CMakeLists.txt >+ echo 'Patch #4 (openbabel-2.3.0-plugindir.patch):' >Patch #4 (openbabel-2.3.0-plugindir.patch): >+ /usr/bin/cat /builddir/build/SOURCES/openbabel-2.3.0-plugindir.patch >+ /usr/bin/patch -p1 -b --suffix .plugindir --fuzz=0 >patching file CMakeLists.txt >Hunk #1 succeeded at 252 (offset 34 lines). >+ echo 'Patch #5 (openbabel-2.3.1-gcc47-darwin.patch):' >Patch #5 (openbabel-2.3.1-gcc47-darwin.patch): >+ /usr/bin/cat /builddir/build/SOURCES/openbabel-2.3.1-gcc47-darwin.patch >+ /usr/bin/patch -p1 -b --suffix .gcc47 --fuzz=0 >patching file scripts/ruby/extconf.rb >+ echo 'Patch #6 (openbabel-2.3.1-noswig-rubymethod.patch):' >Patch #6 (openbabel-2.3.1-noswig-rubymethod.patch): >+ /usr/bin/cat /builddir/build/SOURCES/openbabel-2.3.1-noswig-rubymethod.patch >+ /usr/bin/patch -p1 -b --suffix .noswig_ruby --fuzz=0 >patching file scripts/CMakeLists.txt >Hunk #1 succeeded at 282 (offset -8 lines). >+ echo 'Patch #7 (openbabel-2.3.1-ruby19-vendorarch.patch):' >Patch #7 (openbabel-2.3.1-ruby19-vendorarch.patch): >+ /usr/bin/cat /builddir/build/SOURCES/openbabel-2.3.1-ruby19-vendorarch.patch >+ /usr/bin/patch -p1 -b --suffix .ruby_vendor --fuzz=0 >patching file scripts/CMakeLists.txt >Hunk #1 succeeded at 316 (offset -8 lines). >+ chmod 644 src/formats/fchkformat.cpp src/formats/genbankformat.cpp src/formats/mmcifformat.cpp >+ chmod 644 src/math/align.cpp >+ chmod 644 include/openbabel/graphsym.h include/openbabel/math/align.h >+ convert src/GUI/babel.xpm -transparent white babel.png >+ pushd doc >~/build/BUILD/openbabel-2.3.2/doc ~/build/BUILD/openbabel-2.3.2 >+ for man in '*.1' >++ basename babel.1 .1 >+ html=babel.html >+ '[' -f babel.html ']' >+ rm babel.html >+ for man in '*.1' >++ basename obabel.1 .1 >+ html=obabel.html >+ '[' -f obabel.html ']' >+ for man in '*.1' >++ basename obchiral.1 .1 >+ html=obchiral.html >+ '[' -f obchiral.html ']' >+ rm obchiral.html >+ for man in '*.1' >++ basename obconformer.1 .1 >+ html=obconformer.html >+ '[' -f obconformer.html ']' >+ rm obconformer.html >+ for man in '*.1' >++ basename obenergy.1 .1 >+ html=obenergy.html >+ '[' -f obenergy.html ']' >+ rm obenergy.html >+ for man in '*.1' >++ basename obfit.1 .1 >+ html=obfit.html >+ '[' -f obfit.html ']' >+ rm obfit.html >+ for man in '*.1' >++ basename obgen.1 .1 >+ html=obgen.html >+ '[' -f obgen.html ']' >+ rm obgen.html >+ for man in '*.1' >++ basename obgrep.1 .1 >+ html=obgrep.html >+ '[' -f obgrep.html ']' >+ rm obgrep.html >+ for man in '*.1' >++ basename obgui.1 .1 >+ html=obgui.html >+ '[' -f obgui.html ']' >+ rm obgui.html >+ for man in '*.1' >++ basename obminimize.1 .1 >+ html=obminimize.html >+ '[' -f obminimize.html ']' >+ rm obminimize.html >+ for man in '*.1' >++ basename obprobe.1 .1 >+ html=obprobe.html >+ '[' -f obprobe.html ']' >+ rm obprobe.html >+ for man in '*.1' >++ basename obprop.1 .1 >+ html=obprop.html >+ '[' -f obprop.html ']' >+ rm obprop.html >+ for man in '*.1' >++ basename obrotamer.1 .1 >+ html=obrotamer.html >+ '[' -f obrotamer.html ']' >+ rm obrotamer.html >+ for man in '*.1' >++ basename obrotate.1 .1 >+ html=obrotate.html >+ '[' -f obrotate.html ']' >+ rm obrotate.html >+ for man in '*.1' >++ basename obspectrophore.1 .1 >+ html=obspectrophore.html >+ '[' -f obspectrophore.html ']' >+ rm obspectrophore.html >+ for man in '*.1' >++ basename roundtrip.1 .1 >+ html=roundtrip.html >+ '[' -f roundtrip.html ']' >+ exit 0 >Executing(%build): /bin/sh -e /var/tmp/rpm-tmp.uyAZSU >+ umask 022 >+ cd /builddir/build/BUILD >+ cd openbabel-2.3.2 >+ CFLAGS='-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard' >+ export CFLAGS >+ CXXFLAGS='-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard' >+ export CXXFLAGS >+ FFLAGS='-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -I/usr/lib/gfortran/modules' >+ export FFLAGS >+ FCFLAGS='-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -I/usr/lib/gfortran/modules' >+ export FCFLAGS >+ LDFLAGS='-Wl,-z,relro ' >+ export LDFLAGS >+ /usr/bin/cmake -DCMAKE_C_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_CXX_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_Fortran_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_VERBOSE_MAKEFILE:BOOL=ON -DCMAKE_INSTALL_PREFIX:PATH=/usr -DINCLUDE_INSTALL_DIR:PATH=/usr/include -DLIB_INSTALL_DIR:PATH=/usr/lib -DSYSCONF_INSTALL_DIR:PATH=/etc -DSHARE_INSTALL_PREFIX:PATH=/usr/share -DBUILD_SHARED_LIBS:BOOL=ON -DCMAKE_SKIP_RPATH:BOOL=ON -DBUILD_GUI:BOOL=ON -DPYTHON_BINDINGS:BOOL=ON -DPERL_BINDINGS:BOOL=ON -DRUBY_BINDINGS:BOOL=ON -DOPENBABEL_USE_SYSTEM_INCHI=true -DENABLE_VERSIONED_FORMATS=false -DRUN_SWIG=true -DENABLE_TESTS:BOOL=ON . >-- The C compiler identification is GNU 4.9.0 >-- The CXX compiler identification is GNU 4.9.0 >-- Check for working C compiler: /usr/bin/cc >-- Check for working C compiler: /usr/bin/cc -- works >-- Detecting C compiler ABI info >-- Detecting C compiler ABI info - done >-- Check for working CXX compiler: /usr/bin/c++ >-- Check for working CXX compiler: /usr/bin/c++ -- works >-- Detecting CXX compiler ABI info >-- Detecting CXX compiler ABI info - done >-- Found INCHI: /usr/lib/libinchi.so >-- Found LibXml2: /usr/lib/libxml2.so (found version "2.9.1") >-- Found ZLIB: /usr/lib/libz.so (found version "1.2.8") >-- Found wxWidgets: TRUE >-- Looking for conio.h >-- Looking for conio.h - not found >-- Looking for sys/time.h >-- Looking for sys/time.h - found >-- Looking for time.h >-- Looking for time.h - found >-- Looking for strings.h >-- Looking for strings.h - found >-- Looking for rpc/xdr.h >-- Looking for rpc/xdr.h - found >-- Looking for regex.h >-- Looking for regex.h - found >-- Looking for C++ include sstream >-- Looking for C++ include sstream - found >-- Looking for rint >-- Looking for rint - not found >-- Looking for snprintf >-- Looking for snprintf - found >-- Looking for sranddev >-- Looking for sranddev - not found >-- Looking for strcasecmp >-- Looking for strcasecmp - found >-- Looking for strncasecmp >-- Looking for strncasecmp - found >-- Looking for dlopen in dl >-- Looking for dlopen in dl - found >-- Looking for sys/types.h >-- Looking for sys/types.h - found >-- Looking for stdint.h >-- Looking for stdint.h - found >-- Looking for stddef.h >-- Looking for stddef.h - found >-- Check size of clock_t >-- Check size of clock_t - done >-- Performing Test SCANDIR_NEEDS_CONST >-- Performing Test SCANDIR_NEEDS_CONST - Failed >-- Performing Test HAVE_GCC_VISIBILITY >-- Performing Test HAVE_GCC_VISIBILITY - Success >-- Found Eigen3: /usr/include/eigen3 (Required is at least version "2.91.0") >-- Found PkgConfig: /usr/bin/pkg-config (found version "0.28") >-- checking for module 'cairo' >-- found cairo, version 1.13.1 >-- Found Cairo: /usr/lib/libcairo.so >-- Cairo found. PNG output will be supported. >-- Looking for getopt >-- Looking for getopt - found >-- Attempting to build the GUI >-- wxWidgets found => GUI will be built >CMake Warning (dev) at test/CMakeLists.txt:171 (include): > Syntax Warning in cmake code at > /builddir/build/BUILD/openbabel-2.3.2/cmake/modules/UsePythonTest.cmake:54:14 > Argument not separated from preceding token by whitespace. >This warning is for project developers. Use -Wno-dev to suppress it. >CMake Warning (dev) at test/CMakeLists.txt:171 (include): > Syntax Warning in cmake code at > /builddir/build/BUILD/openbabel-2.3.2/cmake/modules/UsePythonTest.cmake:54:31 > Argument not separated from preceding token by whitespace. >This warning is for project developers. Use -Wno-dev to suppress it. >CMake Warning (dev) at test/CMakeLists.txt:171 (include): > Syntax Warning in cmake code at > /builddir/build/BUILD/openbabel-2.3.2/cmake/modules/UsePythonTest.cmake:57:25 > Argument not separated from preceding token by whitespace. >This warning is for project developers. Use -Wno-dev to suppress it. >CMake Warning (dev) at test/CMakeLists.txt:171 (include): > Syntax Warning in cmake code at > /builddir/build/BUILD/openbabel-2.3.2/cmake/modules/UsePythonTest.cmake:57:39 > Argument not separated from preceding token by whitespace. >This warning is for project developers. Use -Wno-dev to suppress it. >-- Found PythonInterp: /usr/bin/python (found version "2.7.6") >-- Found SWIG: /usr/bin/swig (found version "3.0.0") >-- Found SWIG: /usr/bin/swig (found suitable version "3.0.0", minimum required is "2.0") >-- Found PythonLibs: /usr/lib/libpython2.7.so (found version "2.7.6") >-- Python bindings will be compiled >-- Found Perl: /usr/bin/perl (found version "5.18.2") >-- Found PerlLibs: /usr/lib/libperl.so (found version "5.18.2") >-- Perl bindings will be compiled >-- Found Ruby: /usr/bin/ruby (found version "2.1.0") >-- Ruby bindings will be compiled >-e:1:in `<main>': Use RbConfig instead of obsolete and deprecated Config. >-e:1:in `<main>': Use RbConfig instead of obsolete and deprecated Config. >-- Configuring done >-- Generating done >CMake Warning: > Manually-specified variables were not used by the project: > CMAKE_C_FLAGS_RELEASE > CMAKE_Fortran_FLAGS_RELEASE > INCLUDE_INSTALL_DIR > SHARE_INSTALL_PREFIX > SYSCONF_INSTALL_DIR >-- Build files have been written to: /builddir/build/BUILD/openbabel-2.3.2 >+ make VERBOSE=1 -j4 >/usr/bin/cmake -H/builddir/build/BUILD/openbabel-2.3.2 -B/builddir/build/BUILD/openbabel-2.3.2 --check-build-system CMakeFiles/Makefile.cmake 0 >/usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles/progress.marks >make -f CMakeFiles/Makefile2 all >make[1]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f src/CMakeFiles/openbabel.dir/build.make src/CMakeFiles/openbabel.dir/depend >make -f scripts/CMakeFiles/pre_bindings_perl.dir/build.make scripts/CMakeFiles/pre_bindings_perl.dir/depend >make -f scripts/CMakeFiles/pre_bindings_ruby.dir/build.make scripts/CMakeFiles/pre_bindings_ruby.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/scripts /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/scripts /builddir/build/BUILD/openbabel-2.3.2/scripts/CMakeFiles/pre_bindings_perl.dir/DependInfo.cmake --color= >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/scripts /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/scripts /builddir/build/BUILD/openbabel-2.3.2/scripts/CMakeFiles/pre_bindings_ruby.dir/DependInfo.cmake --color= >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src /builddir/build/BUILD/openbabel-2.3.2/src/CMakeFiles/openbabel.dir/DependInfo.cmake --color= >Dependee "/builddir/build/BUILD/openbabel-2.3.2/scripts/CMakeFiles/pre_bindings_ruby.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/scripts/CMakeFiles/pre_bindings_ruby.dir/depend.internal". >Dependee "/builddir/build/BUILD/openbabel-2.3.2/scripts/CMakeFiles/pre_bindings_perl.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/scripts/CMakeFiles/pre_bindings_perl.dir/depend.internal". >Dependee "/builddir/build/BUILD/openbabel-2.3.2/scripts/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/scripts/CMakeFiles/pre_bindings_perl.dir/depend.internal". >Dependee "/builddir/build/BUILD/openbabel-2.3.2/scripts/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/scripts/CMakeFiles/pre_bindings_ruby.dir/depend.internal". >Scanning dependencies of target pre_bindings_ruby >Scanning dependencies of target pre_bindings_perl >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f scripts/CMakeFiles/pre_bindings_perl.dir/build.make scripts/CMakeFiles/pre_bindings_perl.dir/build >make -f scripts/CMakeFiles/pre_bindings_ruby.dir/build.make scripts/CMakeFiles/pre_bindings_ruby.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2/scripts && /usr/bin/cmake -E make_directory /builddir/build/BUILD/openbabel-2.3.2/scripts/perl >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2/scripts && /usr/bin/cmake -E make_directory /builddir/build/BUILD/openbabel-2.3.2/scripts/ruby >Dependee "/builddir/build/BUILD/openbabel-2.3.2/src/CMakeFiles/openbabel.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/src/CMakeFiles/openbabel.dir/depend.internal". >Dependee "/builddir/build/BUILD/openbabel-2.3.2/src/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/src/CMakeFiles/openbabel.dir/depend.internal". >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 0%] [ 0%] Built target pre_bindings_perl >Built target pre_bindings_ruby >Scanning dependencies of target openbabel >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f src/CMakeFiles/openbabel.dir/build.make src/CMakeFiles/openbabel.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles 35 >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 0%] [ 0%] [ 1%] [ 1%] Building CXX object src/CMakeFiles/openbabel.dir/alias.o >cd /builddir/build/BUILD/openbabel-2.3.2/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -o CMakeFiles/openbabel.dir/alias.o -c /builddir/build/BUILD/openbabel-2.3.2/src/alias.cpp >Building CXX object src/CMakeFiles/openbabel.dir/base.o >cd /builddir/build/BUILD/openbabel-2.3.2/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -o CMakeFiles/openbabel.dir/base.o -c /builddir/build/BUILD/openbabel-2.3.2/src/base.cpp >Building CXX object src/CMakeFiles/openbabel.dir/atom.o >cd /builddir/build/BUILD/openbabel-2.3.2/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -o CMakeFiles/openbabel.dir/atom.o -c /builddir/build/BUILD/openbabel-2.3.2/src/atom.cpp >Building CXX object src/CMakeFiles/openbabel.dir/bitvec.o >cd /builddir/build/BUILD/openbabel-2.3.2/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -o CMakeFiles/openbabel.dir/bitvec.o -c /builddir/build/BUILD/openbabel-2.3.2/src/bitvec.cpp >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 1%] Building CXX object src/CMakeFiles/openbabel.dir/bond.o >cd /builddir/build/BUILD/openbabel-2.3.2/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -o CMakeFiles/openbabel.dir/bond.o -c /builddir/build/BUILD/openbabel-2.3.2/src/bond.cpp >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles 36 >[ 2%] Building CXX object src/CMakeFiles/openbabel.dir/bondtyper.o >cd /builddir/build/BUILD/openbabel-2.3.2/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -o CMakeFiles/openbabel.dir/bondtyper.o -c /builddir/build/BUILD/openbabel-2.3.2/src/bondtyper.cpp >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 2%] Building CXX object src/CMakeFiles/openbabel.dir/builder.o >cd /builddir/build/BUILD/openbabel-2.3.2/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -o CMakeFiles/openbabel.dir/builder.o -c /builddir/build/BUILD/openbabel-2.3.2/src/builder.cpp >/builddir/build/BUILD/openbabel-2.3.2/src/builder.cpp:186:7: warning: multi-line comment [-Wcomment] > // \ \ > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/builder.cpp:188:7: warning: multi-line comment [-Wcomment] > // \ > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/builder.cpp:195:7: warning: multi-line comment [-Wcomment] > // \ \ > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/builder.cpp:197:7: warning: multi-line comment [-Wcomment] > // \ > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/builder.cpp:264:7: warning: multi-line comment [-Wcomment] > // \ \ > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/builder.cpp:1226:5: warning: multi-line comment [-Wcomment] > // / / v2 / \ > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/builder.cpp:1334:9: warning: multi-line comment [-Wcomment] > // / \ > ^ >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 2%] Building CXX object src/CMakeFiles/openbabel.dir/canon.o >cd /builddir/build/BUILD/openbabel-2.3.2/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -o CMakeFiles/openbabel.dir/canon.o -c /builddir/build/BUILD/openbabel-2.3.2/src/canon.cpp >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles 37 >[ 3%] Building CXX object src/CMakeFiles/openbabel.dir/chains.o >cd /builddir/build/BUILD/openbabel-2.3.2/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -o CMakeFiles/openbabel.dir/chains.o -c /builddir/build/BUILD/openbabel-2.3.2/src/chains.cpp >/builddir/build/BUILD/openbabel-2.3.2/src/canon.cpp: In constructor 'OpenBabel::CanonicalLabelsImpl::State::State(const std::vector<unsigned int>&, const OpenBabel::OBBitVec&, std::vector<OpenBabel::CanonicalLabelsImpl::StereoCenter>&, std::vector<OpenBabel::CanonicalLabelsImpl::FullCode>&, OpenBabel::CanonicalLabelsImpl::Orbits&, OpenBabel::OBBitVec&, bool)': >/builddir/build/BUILD/openbabel-2.3.2/src/canon.cpp:710:34: warning: 'OpenBabel::CanonicalLabelsImpl::State::stereoCenters' will be initialized after [-Wreorder] > std::vector<StereoCenter> &stereoCenters; > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/canon.cpp:704:18: warning: 'const bool OpenBabel::CanonicalLabelsImpl::State::onlyOne' [-Wreorder] > const bool onlyOne; > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/canon.cpp:685:7: warning: when initialized here [-Wreorder] > State(const std::vector<unsigned int> &_symmetry_classes, > ^ >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 3%] Building CXX object src/CMakeFiles/openbabel.dir/chargemodel.o >cd /builddir/build/BUILD/openbabel-2.3.2/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -o CMakeFiles/openbabel.dir/chargemodel.o -c /builddir/build/BUILD/openbabel-2.3.2/src/chargemodel.cpp >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 3%] Building CXX object src/CMakeFiles/openbabel.dir/chiral.o >cd /builddir/build/BUILD/openbabel-2.3.2/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -o CMakeFiles/openbabel.dir/chiral.o -c /builddir/build/BUILD/openbabel-2.3.2/src/chiral.cpp >/builddir/build/BUILD/openbabel-2.3.2/src/chains.cpp: In member function 'void OpenBabel::OBChainsParser::ConstrainBackbone(OpenBabel::OBMol&, OpenBabel::Template*, int)': >/builddir/build/BUILD/openbabel-2.3.2/src/chains.cpp:1271:68: warning: 'nd' may be used uninitialized in this function [-Wmaybe-uninitialized] > result = Match4Constraints(pep,na,nb,nc,nd); > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/chains.cpp:1273:65: warning: 'nc' may be used uninitialized in this function [-Wmaybe-uninitialized] > result = Match3Constraints(pep,na,nb,nc); > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/chains.cpp:1275:62: warning: 'nb' may be used uninitialized in this function [-Wmaybe-uninitialized] > result = Match2Constraints(pep,na,nb); > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/chains.cpp:1277:61: warning: 'na' may be used uninitialized in this function [-Wmaybe-uninitialized] > result = MatchConstraint(na,pep->n1); > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/chains.cpp: In member function 'void OpenBabel::OBChainsParser::TracePeptideChain(OpenBabel::OBMol&, unsigned int, int)': >/builddir/build/BUILD/openbabel-2.3.2/src/chains.cpp:1356:18: warning: 'na' may be used uninitialized in this function [-Wmaybe-uninitialized] > unsigned int na,nb,nc; > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/chains.cpp:1356:21: warning: 'nb' may be used uninitialized in this function [-Wmaybe-uninitialized] > unsigned int na,nb,nc; > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/chains.cpp:1356:24: warning: 'nc' may be used uninitialized in this function [-Wmaybe-uninitialized] > unsigned int na,nb,nc; > ^ >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles 38 >[ 4%] Building CXX object src/CMakeFiles/openbabel.dir/data.o >cd /builddir/build/BUILD/openbabel-2.3.2/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -o CMakeFiles/openbabel.dir/data.o -c /builddir/build/BUILD/openbabel-2.3.2/src/data.cpp >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 4%] Building CXX object src/CMakeFiles/openbabel.dir/descriptor.o >cd /builddir/build/BUILD/openbabel-2.3.2/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -o CMakeFiles/openbabel.dir/descriptor.o -c /builddir/build/BUILD/openbabel-2.3.2/src/descriptor.cpp >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 4%] Building CXX object src/CMakeFiles/openbabel.dir/fingerprint.o >cd /builddir/build/BUILD/openbabel-2.3.2/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -o CMakeFiles/openbabel.dir/fingerprint.o -c /builddir/build/BUILD/openbabel-2.3.2/src/fingerprint.cpp >/builddir/build/BUILD/openbabel-2.3.2/src/fingerprint.cpp: In member function 'bool OpenBabel::FastSearch::Find(OpenBabel::OBBase*, std::vector<unsigned int>&, unsigned int)': >/builddir/build/BUILD/openbabel-2.3.2/src/fingerprint.cpp:161:53: warning: operation on 'ppat' may be undefined [-Wsequence-point] > if ( (a=((*ppat) & (*p++)) ^ (*ppat++)) ) break; > ^ >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles 39 >[ 5%] Building CXX object src/CMakeFiles/openbabel.dir/forcefield.o >cd /builddir/build/BUILD/openbabel-2.3.2/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -o CMakeFiles/openbabel.dir/forcefield.o -c /builddir/build/BUILD/openbabel-2.3.2/src/forcefield.cpp >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 5%] /builddir/build/BUILD/openbabel-2.3.2/src/forcefield.cpp: In static member function 'static bool OpenBabel::OBForceField::IgnoreCalculation(int, int)': >/builddir/build/BUILD/openbabel-2.3.2/src/forcefield.cpp:427:21: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] > if (_ignoreAtom == a) > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/forcefield.cpp:429:21: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] > if (_ignoreAtom == b) > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/forcefield.cpp: In static member function 'static bool OpenBabel::OBForceField::IgnoreCalculation(int, int, int)': >/builddir/build/BUILD/openbabel-2.3.2/src/forcefield.cpp:439:21: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] > if (_ignoreAtom == b) > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/forcefield.cpp: In static member function 'static bool OpenBabel::OBForceField::IgnoreCalculation(int, int, int, int)': >/builddir/build/BUILD/openbabel-2.3.2/src/forcefield.cpp:449:21: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] > if (_ignoreAtom == d) > ^ >Building CXX object src/CMakeFiles/openbabel.dir/format.o >cd /builddir/build/BUILD/openbabel-2.3.2/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -o CMakeFiles/openbabel.dir/format.o -c /builddir/build/BUILD/openbabel-2.3.2/src/format.cpp >/builddir/build/BUILD/openbabel-2.3.2/src/forcefield.cpp: In member function 'int OpenBabel::OBFFConstraints::GetConstraintType(int) const': >/builddir/build/BUILD/openbabel-2.3.2/src/forcefield.cpp:701:15: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] > if (index >= _constraints.size()) > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/forcefield.cpp: In member function 'double OpenBabel::OBFFConstraints::GetConstraintValue(int) const': >/builddir/build/BUILD/openbabel-2.3.2/src/forcefield.cpp:709:15: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] > if (index >= _constraints.size()) > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/forcefield.cpp: In member function 'int OpenBabel::OBFFConstraints::GetConstraintAtomA(int) const': >/builddir/build/BUILD/openbabel-2.3.2/src/forcefield.cpp:717:15: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] > if (index >= _constraints.size()) > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/forcefield.cpp: In member function 'int OpenBabel::OBFFConstraints::GetConstraintAtomB(int) const': >/builddir/build/BUILD/openbabel-2.3.2/src/forcefield.cpp:725:15: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] > if (index >= _constraints.size()) > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/forcefield.cpp: In member function 'int OpenBabel::OBFFConstraints::GetConstraintAtomC(int) const': >/builddir/build/BUILD/openbabel-2.3.2/src/forcefield.cpp:733:15: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] > if (index >= _constraints.size()) > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/forcefield.cpp: In member function 'int OpenBabel::OBFFConstraints::GetConstraintAtomD(int) const': >/builddir/build/BUILD/openbabel-2.3.2/src/forcefield.cpp:741:15: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] > if (index >= _constraints.size()) > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/forcefield.cpp: In function 'void OpenBabel::Reweight(std::vector<std::vector<double> >&, std::vector<int>, double)': >/builddir/build/BUILD/openbabel-2.3.2/src/forcefield.cpp:1462:15: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] > if (j == rotorKey[i]) > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/forcefield.cpp:1481:15: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] > if (j == rotorKey[i]) > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/forcefield.cpp: In member function 'void OpenBabel::OBForceField::DistanceGeometry()': >/builddir/build/BUILD/openbabel-2.3.2/src/forcefield.cpp:1854:26: warning: variable 'l_bc' set but not used [-Wunused-but-set-variable] > double l_ab, l_bc, l_ac; // lower limits > ^ >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles 40 >[ 6%] Building CXX object src/CMakeFiles/openbabel.dir/generic.o >cd /builddir/build/BUILD/openbabel-2.3.2/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -o CMakeFiles/openbabel.dir/generic.o -c /builddir/build/BUILD/openbabel-2.3.2/src/generic.cpp >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 6%] Building CXX object src/CMakeFiles/openbabel.dir/graphsym.o >cd /builddir/build/BUILD/openbabel-2.3.2/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -o CMakeFiles/openbabel.dir/graphsym.o -c /builddir/build/BUILD/openbabel-2.3.2/src/graphsym.cpp >/builddir/build/BUILD/openbabel-2.3.2/src/generic.cpp: In member function 'void OpenBabel::OBOrbitalData::LoadClosedShellOrbitals(std::vector<double>, std::vector<std::basic_string<char> >, int)': >/builddir/build/BUILD/openbabel-2.3.2/src/generic.cpp:1424:19: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] > if (alphaHOMO > energies.size()) > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/generic.cpp:1440:15: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] > if (i < alphaHOMO) > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/generic.cpp: In member function 'void OpenBabel::OBOrbitalData::LoadAlphaOrbitals(std::vector<double>, std::vector<std::basic_string<char> >, int)': >/builddir/build/BUILD/openbabel-2.3.2/src/generic.cpp:1455:19: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] > if (alphaHOMO > energies.size()) > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/generic.cpp:1469:15: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] > if (i < alphaHOMO) > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/generic.cpp: In member function 'void OpenBabel::OBOrbitalData::LoadBetaOrbitals(std::vector<double>, std::vector<std::basic_string<char> >, int)': >/builddir/build/BUILD/openbabel-2.3.2/src/generic.cpp:1484:18: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] > if (betaHOMO > energies.size()) > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/generic.cpp:1498:15: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] > if (i < betaHOMO) > ^ >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 6%] Building CXX object src/CMakeFiles/openbabel.dir/grid.o >cd /builddir/build/BUILD/openbabel-2.3.2/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -o CMakeFiles/openbabel.dir/grid.o -c /builddir/build/BUILD/openbabel-2.3.2/src/grid.cpp >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles 41 >[ 7%] Building CXX object src/CMakeFiles/openbabel.dir/griddata.o >cd /builddir/build/BUILD/openbabel-2.3.2/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -o CMakeFiles/openbabel.dir/griddata.o -c /builddir/build/BUILD/openbabel-2.3.2/src/griddata.cpp >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 7%] Building CXX object src/CMakeFiles/openbabel.dir/isomorphism.o >cd /builddir/build/BUILD/openbabel-2.3.2/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -o CMakeFiles/openbabel.dir/isomorphism.o -c /builddir/build/BUILD/openbabel-2.3.2/src/isomorphism.cpp >/builddir/build/BUILD/openbabel-2.3.2/src/isomorphism.cpp: In member function 'void OpenBabel::VF2Mapper::MapNext(OpenBabel::VF2Mapper::State&, OpenBabel::OBQueryAtom*, OpenBabel::OBAtom*)': >/builddir/build/BUILD/openbabel-2.3.2/src/isomorphism.cpp:310:38: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] > if (time(NULL) - m_startTime > m_timeout) > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/isomorphism.cpp: In member function 'virtual void OpenBabel::VF2Mapper::MapGeneric(OpenBabel::OBIsomorphismMapper::Functor&, const OpenBabel::OBMol*, const OpenBabel::OBBitVec&)': >/builddir/build/BUILD/openbabel-2.3.2/src/isomorphism.cpp:494:38: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] > if (time(NULL) - m_startTime > m_timeout) > ^ >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 7%] Building CXX object src/CMakeFiles/openbabel.dir/kekulize.o >cd /builddir/build/BUILD/openbabel-2.3.2/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -o CMakeFiles/openbabel.dir/kekulize.o -c /builddir/build/BUILD/openbabel-2.3.2/src/kekulize.cpp >/builddir/build/BUILD/openbabel-2.3.2/src/kekulize.cpp: In function 'bool OpenBabel::expandKekulize(OpenBabel::OBMol*, int, std::vector<int>&, std::vector<int>&, OpenBabel::Kekulize::Timeout&)': >/builddir/build/BUILD/openbabel-2.3.2/src/kekulize.cpp:719:18: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] > if (bond_idx >= bondState.size()) > ^ >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles 42 >[ 8%] Building CXX object src/CMakeFiles/openbabel.dir/locale.o >cd /builddir/build/BUILD/openbabel-2.3.2/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -o CMakeFiles/openbabel.dir/locale.o -c /builddir/build/BUILD/openbabel-2.3.2/src/locale.cpp >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 8%] Building CXX object src/CMakeFiles/openbabel.dir/matrix.o >cd /builddir/build/BUILD/openbabel-2.3.2/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -o CMakeFiles/openbabel.dir/matrix.o -c /builddir/build/BUILD/openbabel-2.3.2/src/matrix.cpp >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 8%] Building CXX object src/CMakeFiles/openbabel.dir/mcdlutil.o >cd /builddir/build/BUILD/openbabel-2.3.2/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -o CMakeFiles/openbabel.dir/mcdlutil.o -c /builddir/build/BUILD/openbabel-2.3.2/src/mcdlutil.cpp >/builddir/build/BUILD/openbabel-2.3.2/src/mcdlutil.cpp:421:5: warning: multi-line comment [-Wcomment] > // / \ > ^ >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles 43 >[ 9%] Building CXX object src/CMakeFiles/openbabel.dir/molchrg.o >cd /builddir/build/BUILD/openbabel-2.3.2/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -o CMakeFiles/openbabel.dir/molchrg.o -c /builddir/build/BUILD/openbabel-2.3.2/src/molchrg.cpp >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 9%] Building CXX object src/CMakeFiles/openbabel.dir/mol.o >cd /builddir/build/BUILD/openbabel-2.3.2/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -o CMakeFiles/openbabel.dir/mol.o -c /builddir/build/BUILD/openbabel-2.3.2/src/mol.cpp >/builddir/build/BUILD/openbabel-2.3.2/src/mcdlutil.cpp: In member function 'bool OpenBabel::TSimpleMolecule::threeBondResolve(int, int, double&, double&, OpenBabel::neighbourlist*)': >/builddir/build/BUILD/openbabel-2.3.2/src/mcdlutil.cpp:962:16: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] > for (i=0; i<bk[an].nb; i++) { > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/mcdlutil.cpp:964:13: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] > if (n != bondExcluded) { > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/mcdlutil.cpp:976:26: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] > for (k=0; k<rs; k++) if (bondList[k] == (*blStore)[j]) { > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/mcdlutil.cpp:989:22: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] > for (j=0; j<rs; j++) { > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/mcdlutil.cpp:1011:20: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] > for (i=0; i<nAtoms(); i++) { > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/mcdlutil.cpp: In member function 'void OpenBabel::TSimpleMolecule::deleteAtom(int)': >/builddir/build/BUILD/openbabel-2.3.2/src/mcdlutil.cpp:1390:16: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] > for (i=0; i<nAtoms(); i++) if (i != index) { > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/mcdlutil.cpp:1390:38: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] > for (i=0; i<nAtoms(); i++) if (i != index) { > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/mcdlutil.cpp: In member function 'bool OpenBabel::TSimpleMolecule::makeFragment(std::vector<int>&, int, int)': >/builddir/build/BUILD/openbabel-2.3.2/src/mcdlutil.cpp:1465:22: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] > for (j=0; j<list.size(); j++) if (list[j] == l) test1=true; > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/mcdlutil.cpp:1472:15: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] > } while (k<list.size()); > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/mcdlutil.cpp: In member function 'void OpenBabel::TSimpleMolecule::defC(int&, int, int, std::vector<int>&, std::vector<int>&, std::vector<std::vector<int> >&, std::vector<int>&, std::vector<int>&, std::vector<int>&, std::vector<int>&, std::vector<int>&)': >/builddir/build/BUILD/openbabel-2.3.2/src/mcdlutil.cpp:2003:22: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] > for (j=0; j<atomCycle[i].size(); j++) if (atomDefine[atomCycle[i][j]]>0) atDef=atDef+1; > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/mcdlutil.cpp:2013:30: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] > if (cN>=0) if (maxAtDef==atomCycle[cN].size()) { > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/mcdlutil.cpp:2028:22: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] > for (j=1; j<atomCycle[cN].size(); j++) atomCycle[cN][j-1]=atomCycle[cN][j]; > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/mcdlutil.cpp:2034:19: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] > for (j=0;j<atomCycle[cN].size()-maxAtDef; j++) { > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/mcdlutil.cpp: In member function 'void OpenBabel::TSimpleMolecule::defA(int&, int, int, int, std::vector<int>&, std::vector<int>, std::vector<int>&, std::vector<std::vector<int> >&, std::vector<int>&, std::vector<int>&, std::vector<int>&, std::vector<int>&)': >/builddir/build/BUILD/openbabel-2.3.2/src/mcdlutil.cpp:2101:98: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] > if (baseCycle>0) for (i=0; i<baseCycle; i++) if (cycleDefine[i]==0) if (atomCycle[i].size()<j) { > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/mcdlutil.cpp: In member function 'void OpenBabel::TSimpleMolecule::redraw(std::vector<int>, std::vector<int>, int, int&, int, int, int, bool)': >/builddir/build/BUILD/openbabel-2.3.2/src/mcdlutil.cpp:2232:67: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] > for (j=0; j<baseCycle; j++) if(cycleDescription[j].size() == cs) { > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/mcdlutil.cpp:2234:24: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] > for (k=0; k<cycleDescription[j].size(); k++) if (bondList[k] != cycleDescription[j][k]) { > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/mcdlutil.cpp:2258:18: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] > for (j=1; j<cycleDescription[i].size(); j++) { > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/mcdlutil.cpp: In member function 'void OpenBabel::TSimpleMolecule::flipSmall(int)': >/builddir/build/BUILD/openbabel-2.3.2/src/mcdlutil.cpp:2979:18: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] > for (i=0; i<list1.size(); i++) { > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/mcdlutil.cpp:2959:10: warning: variable 'test' set but not used [-Wunused-but-set-variable] > bool test; > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/mcdlutil.cpp: In member function 'void OpenBabel::TSimpleMolecule::bondEnlarge(int)': >/builddir/build/BUILD/openbabel-2.3.2/src/mcdlutil.cpp:3018:16: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] > for (i=0; i<list.size(); i++) { //coordinates change > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/mcdlutil.cpp:2996:10: warning: variable 'test' set but not used [-Wunused-but-set-variable] > bool test; > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/mcdlutil.cpp: In function 'bool OpenBabel::compareAtoms(int, int, std::vector<std::vector<int>*>)': >/builddir/build/BUILD/openbabel-2.3.2/src/mcdlutil.cpp:3031:37: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] > if ((a1 < 0) || (a2 < 0) || (a1 >= aeqList.size()) || (a2 >= aeqList.size())) return result; > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/mcdlutil.cpp:3031:63: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] > if ((a1 < 0) || (a2 < 0) || (a1 >= aeqList.size()) || (a2 >= aeqList.size())) return result; > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/mcdlutil.cpp: In member function 'void OpenBabel::TSimpleMolecule::makeEquivalentList(std::vector<int>&, bool)': >/builddir/build/BUILD/openbabel-2.3.2/src/mcdlutil.cpp:3195:18: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] > for (j=0; j<lL->size(); j++) (*lL)[i]=0; > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/mcdlutil.cpp:3203:16: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] > for (i=0; i<equivalenceList.size(); i++) equivalenceList[i]=0; > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/mcdlutil.cpp:3213:20: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] > for (int i=0; i<aeqList.size(); i++) delete(aeqList.at(i)); > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/mcdlutil.cpp: In function 'bool OpenBabel::incrementValues(std::vector<int>&, std::vector<int>)': >/builddir/build/BUILD/openbabel-2.3.2/src/mcdlutil.cpp:3229:13: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] > if (l <= maxValues[i]) { > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/mcdlutil.cpp: In member function 'int OpenBabel::TSimpleMolecule::correctOverlapped()': >/builddir/build/BUILD/openbabel-2.3.2/src/mcdlutil.cpp:3278:18: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] > for (i=0; i<rotBondList.size(); i++) rotBondList[i]=0; > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/mcdlutil.cpp:3323:22: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] > for (i=0; i<inner_bonds.size(); i++) if (inner_bonds[i] != 0) { > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/mcdlutil.cpp:3333:22: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] > for (i=0; i<remainder.size(); i++) { > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/mcdlutil.cpp: In function 'void OpenBabel::deleteIntElement(std::vector<int>*, int)': >/builddir/build/BUILD/openbabel-2.3.2/src/mcdlutil.cpp:3436:44: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] > for (i=0; i<source->size(); i++) if (i != index) { > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/mcdlutil.cpp: In member function 'void OpenBabel::TEditedMolecule::addAsTemplate(OpenBabel::TEditedMolecule&, int, int, int, int, bool)': >/builddir/build/BUILD/openbabel-2.3.2/src/mcdlutil.cpp:4112:19: warning: variable 'nBondsOld' set but not used [-Wunused-but-set-variable] > int nAtomsOld,nBondsOld,naDef1,naDef,i; > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/mcdlutil.cpp:4113:10: warning: variable 'test' set but not used [-Wunused-but-set-variable] > bool test,test1,test2; > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/mcdlutil.cpp:4113:15: warning: variable 'test1' set but not used [-Wunused-but-set-variable] > bool test,test1,test2; > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/mcdlutil.cpp:4113:21: warning: variable 'test2' set but not used [-Wunused-but-set-variable] > bool test,test1,test2; > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/mcdlutil.cpp:4115:40: warning: variable 'xCenter' set but not used [-Wunused-but-set-variable] > double r,scale,xOld,yOld,xNew,yNew,xCenter,yCenter; > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/mcdlutil.cpp:4115:48: warning: variable 'yCenter' set but not used [-Wunused-but-set-variable] > double r,scale,xOld,yOld,xNew,yNew,xCenter,yCenter; > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/mcdlutil.cpp: In member function 'OpenBabel::TEditedMolecule* OpenBabel::TEditedMolecule::extractFragment(int, std::vector<int>*)': >/builddir/build/BUILD/openbabel-2.3.2/src/mcdlutil.cpp:4306:35: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] > if (list.size()>1) for (i=0; i<(list.size()-1); i++) for (j=i+1; j<list.size(); j++) if (list[i]>list[j]) { > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/mcdlutil.cpp:4306:71: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] > if (list.size()>1) for (i=0; i<(list.size()-1); i++) for (j=i+1; j<list.size(); j++) if (list[i]>list[j]) { > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/mcdlutil.cpp:4311:16: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] > for (i=0; i<list.size(); i++) inverseList[list[i]]=i; > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/mcdlutil.cpp:4314:16: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] > for (i=0; i<list.size(); i++) { > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/mcdlutil.cpp:4295:10: warning: variable 'test' set but not used [-Wunused-but-set-variable] > bool test; > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/mcdlutil.cpp: In member function 'int OpenBabel::TEditedMolecule::prepareQuery(OpenBabel::TSimpleMolecule&)': >/builddir/build/BUILD/openbabel-2.3.2/src/mcdlutil.cpp:4487:18: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] > for (j=0; j<queryInverse.size(); j++) queryInverse[j]=queryAQTested[j]; > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/mcdlutil.cpp:4492:18: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] > for (i=0; i<queryQHydr.size(); i++) queryQHydr[i]=queryBQTested[i]; > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/mcdlutil.cpp:4497:18: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] > for (i=0; i<bSTestedStore.size(); i++) bSTestedStore[i]=bSTested[i]; > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/mcdlutil.cpp: In member function 'void OpenBabel::TEditedMolecule::removeHydrogen(std::vector<int>*, std::vector<int>*)': >/builddir/build/BUILD/openbabel-2.3.2/src/mcdlutil.cpp:4532:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] > if (qEnumerator->size() != nAtoms()) qEnumerator->resize(nAtoms()); > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/mcdlutil.cpp:4533:18: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] > for (i=0; i<qEnumerator->size(); i++) (*qEnumerator)[i]=i; > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/mcdlutil.cpp:4562:24: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] > for (j=0; j<qEnumerator->size(); j++) { > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/mcdlutil.cpp: In member function 'bool OpenBabel::TEditedMolecule::fragmentSearch(OpenBabel::TEditedMolecule*, std::vector<int>*)': >/builddir/build/BUILD/openbabel-2.3.2/src/mcdlutil.cpp:4749:32: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] > if (molecule1->listarSize()>aSTested.size()) aSTested.resize(molecule1->listarSize()); > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/mcdlutil.cpp:4750:32: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] > if (molecule1->listarSize()>bSTested.size()) bSTested.resize(molecule1->listarSize()); > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/mcdlutil.cpp:4751:32: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] > if (molecule1->listarSize()>queryQHydr.size()) queryQHydr.resize(molecule1->listarSize()); > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/mcdlutil.cpp:4752:32: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] > if (molecule1->listarSize()>queryAQTested.size()) queryAQTested.resize(molecule1->listarSize()); > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/mcdlutil.cpp:4753:32: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] > if (molecule1->listarSize()>queryBQTested.size()) queryBQTested.resize(molecule1->listarSize()); > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/mcdlutil.cpp:4754:32: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] > if (molecule1->listarSize()>queryCurrentAssignment.size()) queryCurrentAssignment.resize(molecule1->listarSize()); > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/mcdlutil.cpp:4755:27: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] > if (this->listarSize()>queryAQTested.size()) queryAQTested.resize(this->listarSize()); > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/mcdlutil.cpp:4736:9: warning: variable 'cycleNumber' set but not used [-Wunused-but-set-variable] > int cycleNumber; > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/mcdlutil.cpp: In member function 'bool OpenBabel::TemplateRedraw::internalBondsPresent(OpenBabel::TEditedMolecule*, OpenBabel::TSimpleMolecule*)': >/builddir/build/BUILD/openbabel-2.3.2/src/mcdlutil.cpp:5101:16: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] > for (i=0; i<mQuery->nAtoms(); i++) aList[mQuery->queryAQTested[i]]=1; > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/mcdlutil.cpp:5102:16: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] > for (i=0; i<mQuery->nBonds(); i++) bList[mQuery->queryBQTested[i]]=1; > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/mcdlutil.cpp: In member function 'void OpenBabel::TemplateRedraw::rotateBondVertically(OpenBabel::TSimpleMolecule*, std::vector<int>, int, double, double, double&, double&, double&, double&, double&, double&, int&)': >/builddir/build/BUILD/openbabel-2.3.2/src/mcdlutil.cpp:5132:16: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] > for (i=0; i<bondList.size(); i++) { > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/mcdlutil.cpp:5177:16: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] > for (i=0; i<bondList.size(); i++) { > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/mcdlutil.cpp: In member function 'void OpenBabel::TemplateRedraw::selectFragmentConfiguration(OpenBabel::TSimpleMolecule*, std::vector<int>*)': >/builddir/build/BUILD/openbabel-2.3.2/src/mcdlutil.cpp:5211:18: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] > for (i=0; i<atomList->size(); i++) { > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/mcdlutil.cpp:5228:18: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] > for (i=0; i<bondListAll.size(); i++) bondList[i]=bondListAll[i]; > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/mcdlutil.cpp:5258:20: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] > for (i=0; i<bondList.size(); i++) { > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/mcdlutil.cpp:5268:20: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] > for (i=0; i<bondList.size(); i++) { > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/mcdlutil.cpp: In member function 'void OpenBabel::TemplateRedraw::rescaleSingleFragment(OpenBabel::TSimpleMolecule*, std::vector<int>*, OpenBabel::PartFragmentDefinition&, double)': >/builddir/build/BUILD/openbabel-2.3.2/src/mcdlutil.cpp:5299:16: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] > for (i=0; i<atomList->size(); i++) { > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/mcdlutil.cpp:5307:18: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] > for (i=0; i<atomList->size(); i++) { > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/mcdlutil.cpp:5323:16: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] > for (i=0; i<atomList->size(); i++) { > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/mcdlutil.cpp: In member function 'int OpenBabel::TemplateRedraw::coordinatesPrepare(OpenBabel::TEditedMolecule&, int, int)': >/builddir/build/BUILD/openbabel-2.3.2/src/mcdlutil.cpp:5562:17: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] > for (i=kk; i<queryData.size(); i++) if ((TEditedMolecule *)queryData[i]->fragmentSearch(&sm,NULL)) { > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/mcdlutil.cpp:5610:18: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] > for (i=0; i<enumerator.size(); i++) enumerator[i]=-1; > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/mcdlutil.cpp:5613:18: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] > for (i=0; i<enumerator.size(); i++) if (enumerator[i]==-1) { > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/mcdlutil.cpp:5621:20: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] > for (j=0; j<enumerator.size(); j++) if (enumerator[j]==i) { > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/mcdlutil.cpp:5693:18: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] > for (i=0; i<groupsFind.size(); i++) { > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/mcdlutil.cpp:5723:16: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] > for (i=0; i<groupsFind.size(); i++) delete(groupsFind[i]); > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/mcdlutil.cpp:5551:9: warning: variable 'naStore' set but not used [-Wunused-but-set-variable] > int naStore; > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/mcdlutil.cpp: In member function 'void OpenBabel::TemplateRedraw::redrawFine(OpenBabel::TSimpleMolecule&)': >/builddir/build/BUILD/openbabel-2.3.2/src/mcdlutil.cpp:5789:20: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] > for (j=0; j<atomList.size(); j++) { > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/mcdlutil.cpp:5801:30: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] > for (frCount=0; frCount<molList.size(); frCount++) { > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/mcdlutil.cpp:5817:28: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] > for (frCount=0; frCount<molList.size(); frCount++) { > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/mcdlutil.cpp:5841:18: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] > for (i=0; i<atomList.size(); i++) atomList[i]=i; > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/mcdlutil.cpp:5856:28: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] > for (frCount=0; frCount<molList.size(); frCount++) { > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/mcdlutil.cpp:5896:17: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] > for (i=0;i<frList.size(); i++) { > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/mcdlutil.cpp:5903:18: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] > for (i=0; i<frList.size(); i++) { > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/mcdlutil.cpp:5922:16: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] > for (i=0; i<stereoBondList.size(); i++) { > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/mcdlutil.cpp:5930:16: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] > for (i=0; i<stereoBondList.size(); i++) delete(stereoBondList[i]); > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/mcdlutil.cpp:5931:16: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] > for (i=0; i<frList.size(); i++) delete(frList[i]); > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/mcdlutil.cpp:5932:16: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] > for (i=0; i<molList.size(); i++) delete(molList[i]); > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/mcdlutil.cpp: In function 'int OpenBabel::indexOf(std::string, std::string, int)': >/builddir/build/BUILD/openbabel-2.3.2/src/mcdlutil.cpp:6256:16: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] > if (result == string::npos) result=-1; > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/mcdlutil.cpp:6257:16: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] > if (result >= instring.length()) result=-1; > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/mcdlutil.cpp: In function 'std::string OpenBabel::getAtomMCDL(OpenBabel::OBMol*, int, std::vector<int>, std::vector<int>, std::vector<int>, std::vector<int>)': >/builddir/build/BUILD/openbabel-2.3.2/src/mcdlutil.cpp:6444:20: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] > for (j=0; j<priority.size(); j++) priority[j]=0; > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/mcdlutil.cpp:6489:43: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] > if (anumStereo.size() > 1) for (i=0; i<(anumStereo.size()-1); i++) if (anumStereo[i] >= 0) { > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/mcdlutil.cpp:6491:24: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] > for (j=i+1; j<anumStereo.size(); j++) if ((anumStereo[i] >= 0) && (anumStereo[j] >= 0)) if (eqList[anumStereo[i]] == eqList[anumStereo[j]]) n++; > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/mcdlutil.cpp:6497:26: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] > for (j=i+1; j<anumStereo.size(); j++) if ((anumStereo[i] >= 0) && (anumStereo[j] >= 0)) if (eqList[anumStereo[i]] == eqList[anumStereo[j]]) { > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/mcdlutil.cpp:6507:28: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] > for (j=i+1; j<anumStereo.size(); j++) if ((anumStereo[i] >= 0) && (anumStereo[j] >= 0)) if (eqList[anumStereo[i]] == eqList[anumStereo[j]]) anumStereo[j]=-1; > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/mcdlutil.cpp:6510:28: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] > for (j=i+1; j<anumStereo.size(); j++) if ((anumStereo[i] >= 0) && (anumStereo[j] >= 0)) if (eqList[anumStereo[i]] == eqList[anumStereo[j]]) anumStereo[j]=-2; > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/mcdlutil.cpp:6521:30: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] > if (k == 1) for (i=0; i<anumStereo.size(); i++) if (anumStereo[i] == -1) { //all parities should be changed to satisfy.. > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/mcdlutil.cpp:6530:34: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] > if (v.size() > 1) for (i=0; i<(v.size() - 1); i++) for (j=i+1; j<v.size(); j++) { > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/mcdlutil.cpp:6530:69: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] > if (v.size() > 1) for (i=0; i<(v.size() - 1); i++) for (j=i+1; j<v.size(); j++) { > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/mcdlutil.cpp:6540:19: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] > for (i=0; i < v.size(); i++) { > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/mcdlutil.cpp: In function 'std::string OpenBabel::getBondMCDL(OpenBabel::OBMol*, int, int, std::vector<int>, std::vector<int>, int (*)[4], std::vector<int>, std::vector<int>)': >/builddir/build/BUILD/openbabel-2.3.2/src/mcdlutil.cpp:6784:43: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] > if (anumStereo.size() > 1) for (i=0; i<(anumStereo.size()-1); i++) if (anumStereo[i] >= 0) { > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/mcdlutil.cpp:6786:24: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] > for (j=i+1; j<anumStereo.size(); j++) if (bondEquivalent(anumStereo[i],anumStereo[j],eqList,sm)) n++; > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/mcdlutil.cpp:6791:26: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] > for (j=i+1; j<anumStereo.size(); j++) if (bondEquivalent(anumStereo[i],anumStereo[j],eqList,sm)) { > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/mcdlutil.cpp:6805:30: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] > for (j=i+1; j<anumStereo.size(); j++) if (bondEquivalent(anumStereo[i],anumStereo[j],eqList,sm)) { > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/mcdlutil.cpp:6813:26: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] > for (j=i+1; j<anumStereo.size(); j++) if (bondEquivalent(anumStereo[i],anumStereo[j],eqList,sm)) anumStereo[j]=-1; > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/mcdlutil.cpp:6818:34: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] > if (v.size() > 1) for (i=0; i<(v.size() - 1); i++) for (j=i+1; j<v.size(); j++) { > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/mcdlutil.cpp:6818:69: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] > if (v.size() > 1) for (i=0; i<(v.size() - 1); i++) for (j=i+1; j<v.size(); j++) { > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/mcdlutil.cpp:6828:19: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] > for (i=0; i < v.size(); i++) { > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/mcdlutil.cpp:6621:26: warning: variable 'n4' set but not used [-Wunused-but-set-variable] > int i,j,n,m,n1,n2,n3,n4,an1,an2,an3,an4,k; > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/mcdlutil.cpp: In function 'void OpenBabel::implementAtomStereo(std::vector<int>&, std::vector<int>&, std::vector<int>&, std::vector<double>, std::vector<double>, int, int, std::string)': >/builddir/build/BUILD/openbabel-2.3.2/src/mcdlutil.cpp:6901:16: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] > if (n1 < (astereo.length()-1)) astereo=astereo.substr(n1+1); else astereo=""; > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/mcdlutil.cpp: In function 'bool OpenBabel::restoreDoubleBonds(OpenBabel::TEditedMolecule&, bool)': >/builddir/build/BUILD/openbabel-2.3.2/src/mcdlutil.cpp:6980:32: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] > if (bond->at[0]==dblbond->bstereo_refs[ref_atom1] || bond->at[1]==dblbond->bstereo_refs[ref_atom1]) > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/mcdlutil.cpp:6980:81: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] > if (bond->at[0]==dblbond->bstereo_refs[ref_atom1] || bond->at[1]==dblbond->bstereo_refs[ref_atom1]) > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/mcdlutil.cpp:6982:32: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] > if (bond->at[0]==dblbond->bstereo_refs[ref_atom2] || bond->at[1]==dblbond->bstereo_refs[ref_atom2]) > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/mcdlutil.cpp:6982:81: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] > if (bond->at[0]==dblbond->bstereo_refs[ref_atom2] || bond->at[1]==dblbond->bstereo_refs[ref_atom2]) > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/mcdlutil.cpp:6951:10: warning: variable 'hasAcyclic' set but not used [-Wunused-but-set-variable] > bool hasAcyclic=false; > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/mcdlutil.cpp: In function 'void OpenBabel::implementBondStereo(std::vector<int>, std::vector<int>, std::vector<double>&, std::vector<double>&, int, int, std::string)': >/builddir/build/BUILD/openbabel-2.3.2/src/mcdlutil.cpp:7071:16: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] > if (n1 < (bstereo.length()-1)) bstereo=bstereo.substr(n1+1); else bstereo=""; > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/mcdlutil.cpp: In function 'int OpenBabel::groupRedraw(OpenBabel::OBMol*, int, int, bool)': >/builddir/build/BUILD/openbabel-2.3.2/src/mcdlutil.cpp:7206:18: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] > for (i=0; i<atomList.size(); i++) allAtomList[atomList[i]]=1; > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/mcdlutil.cpp:7214:22: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] > for (int i=0; i<atomList.size(); i++) { > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/mcdlutil.cpp: In function 'bool OpenBabel::parseFormula(std::string, std::vector<int>&, int&)': >/builddir/build/BUILD/openbabel-2.3.2/src/mcdlutil.cpp:7256:18: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] > if (n<value.length()) if ((value.at(n)>='0') && (value.at(n)<='9')) { > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/mcdlutil.cpp:7259:27: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] > while ((n2<(value.length()-1)) && (value.at(n2)>='0') && (value.at(n2)<='9')) n2++; > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/mcdlutil.cpp:7280:18: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] > if (n<value.length()) if ((value.at(n)>='0') && (value.at(n)<='9')) { > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/mcdlutil.cpp:7283:27: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] > while ((n2<(value.length()-1)) && (value.at(n2)>='0') && (value.at(n2)<='9')) n2++; > ^ >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 9%] Building CXX object src/CMakeFiles/openbabel.dir/obconversion.o >cd /builddir/build/BUILD/openbabel-2.3.2/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -o CMakeFiles/openbabel.dir/obconversion.o -c /builddir/build/BUILD/openbabel-2.3.2/src/obconversion.cpp >/builddir/build/BUILD/openbabel-2.3.2/src/mol.cpp: In member function 'OpenBabel::OBAtom* OpenBabel::OBMol::NewAtom(long unsigned int)': >/builddir/build/BUILD/openbabel-2.3.2/src/mol.cpp:1657:32: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] > if (vb->GetBgn() > _natoms || vb->GetEnd() > _natoms) > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/mol.cpp:1657:58: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] > if (vb->GetBgn() > _natoms || vb->GetEnd() > _natoms) > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/mol.cpp: In member function 'bool OpenBabel::OBMol::AddAtom(OpenBabel::OBAtom&)': >/builddir/build/BUILD/openbabel-2.3.2/src/mol.cpp:1782:32: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] > if (vb->GetBgn() > _natoms || vb->GetEnd() > _natoms) > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/mol.cpp:1782:58: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] > if (vb->GetBgn() > _natoms || vb->GetEnd() > _natoms) > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/mol.cpp: In member function 'bool OpenBabel::OBMol::StripSalts(int)': >/builddir/build/BUILD/openbabel-2.3.2/src/mol.cpp:1852:22: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] > if (i->size() < threshold || (threshold == 0 && i != max)) > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/mol.cpp: In member function 'void OpenBabel::OBMol::SetConformer(int)': >/builddir/build/BUILD/openbabel-2.3.2/src/mol.cpp:4039:21: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] > if (i >= 0 && i < _vconf.size()) > ^ >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles 44 >[ 10%] In file included from /builddir/build/BUILD/openbabel-2.3.2/src/obconversion.cpp:47:0: >/builddir/build/BUILD/openbabel-2.3.2/include/openbabel/obconversion.h: In constructor 'OpenBabel::OBConversion::OBConversion(std::istream*, std::ostream*)': >/builddir/build/BUILD/openbabel-2.3.2/include/openbabel/obconversion.h:382:21: warning: 'OpenBabel::OBConversion::pAuxConv' will be initialized after [-Wreorder] > OBConversion* pAuxConv;///<Way to extend OBConversion > ^ >/builddir/build/BUILD/openbabel-2.3.2/include/openbabel/obconversion.h:373:17: warning: 'OpenBabel::OBConversion::LErdbuf* OpenBabel::OBConversion::pLineEndBuf' [-Wreorder] > LErdbuf* pLineEndBuf; > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/obconversion.cpp:231:3: warning: when initialized here [-Wreorder] > OBConversion::OBConversion(istream* is, ostream* os) : > ^ >Building CXX object src/CMakeFiles/openbabel.dir/oberror.o >cd /builddir/build/BUILD/openbabel-2.3.2/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -o CMakeFiles/openbabel.dir/oberror.o -c /builddir/build/BUILD/openbabel-2.3.2/src/oberror.cpp >In file included from /builddir/build/BUILD/openbabel-2.3.2/src/zipstream.h:332:0, > from /builddir/build/BUILD/openbabel-2.3.2/src/obconversion.cpp:52: >/builddir/build/BUILD/openbabel-2.3.2/src/zipstreamimpl.h: In instantiation of 'std::streampos zlib_stream::basic_unzip_streambuf<charT, traits>::seekoff(std::streamoff, std::ios_base::seekdir, std::ios_base::openmode) [with charT = char; traits = std::char_traits<char>; std::streampos = std::fpos<__mbstate_t>; std::streamoff = long long int; std::ios_base::seekdir = std::_Ios_Seekdir; std::ios_base::openmode = std::_Ios_Openmode]': >/builddir/build/BUILD/openbabel-2.3.2/src/obconversion.cpp:1749:1: required from here >/builddir/build/BUILD/openbabel-2.3.2/src/zipstreamimpl.h:400:8: warning: variable 'ch' set but not used [-Wunused-but-set-variable] > char ch; > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/zipstreamimpl.h: In instantiation of 'std::streampos zlib_stream::basic_unzip_streambuf<charT, traits>::seekpos(std::streampos, std::ios_base::openmode) [with charT = char; traits = std::char_traits<char>; std::streampos = std::fpos<__mbstate_t>; std::ios_base::openmode = std::_Ios_Openmode]': >/builddir/build/BUILD/openbabel-2.3.2/src/obconversion.cpp:1749:1: required from here >/builddir/build/BUILD/openbabel-2.3.2/src/zipstreamimpl.h:453:8: warning: variable 'ch' set but not used [-Wunused-but-set-variable] > char ch; > ^ >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 10%] Building CXX object src/CMakeFiles/openbabel.dir/obiter.o >cd /builddir/build/BUILD/openbabel-2.3.2/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -o CMakeFiles/openbabel.dir/obiter.o -c /builddir/build/BUILD/openbabel-2.3.2/src/obiter.cpp >/builddir/build/BUILD/openbabel-2.3.2/src/obconversion.cpp: In member function 'int OpenBabel::OBConversion::Convert(std::istream*, std::ostream*)': >/builddir/build/BUILD/openbabel-2.3.2/src/obconversion.cpp:455:13: warning: 'zIn' may be used uninitialized in this function [-Wmaybe-uninitialized] > delete zIn; > ^ >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 10%] Building CXX object src/CMakeFiles/openbabel.dir/obutil.o >cd /builddir/build/BUILD/openbabel-2.3.2/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -o CMakeFiles/openbabel.dir/obutil.o -c /builddir/build/BUILD/openbabel-2.3.2/src/obutil.cpp >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles 45 >[ 11%] Building CXX object src/CMakeFiles/openbabel.dir/op.o >cd /builddir/build/BUILD/openbabel-2.3.2/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -o CMakeFiles/openbabel.dir/op.o -c /builddir/build/BUILD/openbabel-2.3.2/src/op.cpp >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 11%] Building CXX object src/CMakeFiles/openbabel.dir/parsmart.o >cd /builddir/build/BUILD/openbabel-2.3.2/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -o CMakeFiles/openbabel.dir/parsmart.o -c /builddir/build/BUILD/openbabel-2.3.2/src/parsmart.cpp >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 11%] Building CXX object src/CMakeFiles/openbabel.dir/patty.o >cd /builddir/build/BUILD/openbabel-2.3.2/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -o CMakeFiles/openbabel.dir/patty.o -c /builddir/build/BUILD/openbabel-2.3.2/src/patty.cpp >/builddir/build/BUILD/openbabel-2.3.2/src/parsmart.cpp: In function 'int OpenBabel::CreateAtom(OpenBabel::Pattern*, OpenBabel::AtomExpr*, int, int)': >/builddir/build/BUILD/openbabel-2.3.2/src/parsmart.cpp:459:15: warning: variable 'size' set but not used [-Wunused-but-set-variable] > int index,size; > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/parsmart.cpp: In function 'int OpenBabel::CreateBond(OpenBabel::Pattern*, OpenBabel::BondExpr*, int, int)': >/builddir/build/BUILD/openbabel-2.3.2/src/parsmart.cpp:491:15: warning: variable 'size' set but not used [-Wunused-but-set-variable] > int index,size; > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/patty.cpp: In member function 'int OpenBabel::patty::type_to_int(const string&, bool)': >/builddir/build/BUILD/openbabel-2.3.2/src/patty.cpp:277:18: warning: 'result' may be used uninitialized in this function [-Wmaybe-uninitialized] > return(result); > ^ >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles 46 >[ 12%] Building CXX object src/CMakeFiles/openbabel.dir/phmodel.o >cd /builddir/build/BUILD/openbabel-2.3.2/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -o CMakeFiles/openbabel.dir/phmodel.o -c /builddir/build/BUILD/openbabel-2.3.2/src/phmodel.cpp >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 12%] Building CXX object src/CMakeFiles/openbabel.dir/plugin.o >cd /builddir/build/BUILD/openbabel-2.3.2/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -o CMakeFiles/openbabel.dir/plugin.o -c /builddir/build/BUILD/openbabel-2.3.2/src/plugin.cpp >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 12%] Building CXX object src/CMakeFiles/openbabel.dir/pointgroup.o >cd /builddir/build/BUILD/openbabel-2.3.2/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -o CMakeFiles/openbabel.dir/pointgroup.o -c /builddir/build/BUILD/openbabel-2.3.2/src/pointgroup.cpp >/builddir/build/BUILD/openbabel-2.3.2/src/pointgroup.cpp: In member function 'int OpenBabel::PointGroupPrivate::establish_pairs(OpenBabel::PointGroupPrivate::SYMMETRY_ELEMENT*)': >/builddir/build/BUILD/openbabel-2.3.2/src/pointgroup.cpp:257:20: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] > for( i = 0 ; i < _mol->NumAtoms() ; i++ ){ > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/pointgroup.cpp:258:30: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] > if( elem->transform[i] >= _mol->NumAtoms() ){ /* No symmetric atom yet */ > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/pointgroup.cpp:265:24: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] > for( j = 0 ; j < _mol->NumAtoms() ; j++ ){ > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/pointgroup.cpp: In member function 'int OpenBabel::PointGroupPrivate::check_transform_order(OpenBabel::PointGroupPrivate::SYMMETRY_ELEMENT*)': >/builddir/build/BUILD/openbabel-2.3.2/src/pointgroup.cpp:299:20: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] > for( i = 0 ; i < _mol->NumAtoms() ; i++ ){ > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/pointgroup.cpp: In member function 'int OpenBabel::PointGroupPrivate::same_transform(OpenBabel::PointGroupPrivate::SYMMETRY_ELEMENT*, OpenBabel::PointGroupPrivate::SYMMETRY_ELEMENT*)': >/builddir/build/BUILD/openbabel-2.3.2/src/pointgroup.cpp:338:30: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] > for( i = 0, code = 1 ; i < _mol->NumAtoms() ; i++ ){ > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/pointgroup.cpp:345:22: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] > for( i = 0 ; i < _mol->NumAtoms() ; i++ ){ > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/pointgroup.cpp: In member function 'OpenBabel::PointGroupPrivate::SYMMETRY_ELEMENT* OpenBabel::PointGroupPrivate::alloc_symmetry_element()': >/builddir/build/BUILD/openbabel-2.3.2/src/pointgroup.cpp:370:20: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] > for( i = 0 ; i < _mol->NumAtoms() ; i++ ){ > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/pointgroup.cpp: In member function 'int OpenBabel::PointGroupPrivate::check_transform_quality(OpenBabel::PointGroupPrivate::SYMMETRY_ELEMENT*)': >/builddir/build/BUILD/openbabel-2.3.2/src/pointgroup.cpp:393:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] > for( i = 0, max_r = 0 ; i < _mol->NumAtoms() ; i++ ){ > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/pointgroup.cpp: In member function 'double OpenBabel::PointGroupPrivate::eval_optimization_target_function(OpenBabel::PointGroupPrivate::SYMMETRY_ELEMENT*, int*)': >/builddir/build/BUILD/openbabel-2.3.2/src/pointgroup.cpp:447:39: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] > for( i = 0, target = maxr = 0 ; i < _mol->NumAtoms() ; i++ ){ > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/pointgroup.cpp: In member function 'OpenBabel::PointGroupPrivate::SYMMETRY_ELEMENT* OpenBabel::PointGroupPrivate::init_ultimate_plane()': >/builddir/build/BUILD/openbabel-2.3.2/src/pointgroup.cpp:737:20: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] > for( i = 1 ; i < _mol->NumAtoms() ; i++ ){ > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/pointgroup.cpp:786:20: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] > for( k = 0 ; k < _mol->NumAtoms() ; k++ ) > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/pointgroup.cpp: In member function 'OpenBabel::PointGroupPrivate::SYMMETRY_ELEMENT* OpenBabel::PointGroupPrivate::init_ultimate_axis()': >/builddir/build/BUILD/openbabel-2.3.2/src/pointgroup.cpp:908:20: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] > for( i = 0 ; i < _mol->NumAtoms() ; i++ ){ > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/pointgroup.cpp:943:20: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] > for( k = 0 ; k < _mol->NumAtoms() ; k++ ) > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/pointgroup.cpp: In member function 'OpenBabel::PointGroupPrivate::SYMMETRY_ELEMENT* OpenBabel::PointGroupPrivate::init_axis_parameters(double*, double*, double*)': >/builddir/build/BUILD/openbabel-2.3.2/src/pointgroup.cpp:1121:14: warning: suggest explicit braces to avoid ambiguous 'else' [-Wparentheses] > else if( axis->direction[1] <= 0 ) > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/pointgroup.cpp:1118:7: warning: suggest explicit braces to avoid ambiguous 'else' [-Wparentheses] > if( axis->direction[0] <= 0 ) > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/pointgroup.cpp: In member function 'void OpenBabel::PointGroupPrivate::find_center_of_something()': >/builddir/build/BUILD/openbabel-2.3.2/src/pointgroup.cpp:1292:20: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] > for( i = 0 ; i < _mol->NumAtoms() ; i++ ){ > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/pointgroup.cpp:1306:20: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] > for( i = 0 ; i < _mol->NumAtoms() ; i++ ){ > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/pointgroup.cpp: In member function 'void OpenBabel::PointGroupPrivate::find_planes()': >/builddir/build/BUILD/openbabel-2.3.2/src/pointgroup.cpp:1333:20: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] > for( i = 1 ; i < _mol->NumAtoms() ; i++ ){ > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/pointgroup.cpp: In member function 'void OpenBabel::PointGroupPrivate::find_c2_axes()': >/builddir/build/BUILD/openbabel-2.3.2/src/pointgroup.cpp:1392:20: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] > for( i = 1 ; i < _mol->NumAtoms() ; i++ ){ > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/pointgroup.cpp:1426:24: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] > for( k = 0 ; k < _mol->NumAtoms() ; k++ ){ > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/pointgroup.cpp:1440:24: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] > for( k = 0 ; k < _mol->NumAtoms() ; k++ ){ > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/pointgroup.cpp:1446:24: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] > for( k = 0 ; k < _mol->NumAtoms() ; k++ ){ > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/pointgroup.cpp:1448:26: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] > for( l = 0 ; l < _mol->NumAtoms() ; l++ ){ > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/pointgroup.cpp: In member function 'void OpenBabel::PointGroupPrivate::find_higher_axes()': >/builddir/build/BUILD/openbabel-2.3.2/src/pointgroup.cpp:1482:20: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] > for( i = 0 ; i < _mol->NumAtoms() ; i++ ){ > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/pointgroup.cpp:1483:26: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] > for( j = i + 1 ; j < _mol->NumAtoms() ; j++ ){ > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/pointgroup.cpp:1488:24: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] > for( k = 0 ; k < _mol->NumAtoms() ; k++ ){ > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/pointgroup.cpp: In member function 'void OpenBabel::PointGroupPrivate::find_improper_axes()': >/builddir/build/BUILD/openbabel-2.3.2/src/pointgroup.cpp:1514:20: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] > for( i = 0 ; i < _mol->NumAtoms() ; i++ ){ > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/pointgroup.cpp:1515:26: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] > for( j = i + 1 ; j < _mol->NumAtoms() ; j++ ){ > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/pointgroup.cpp:1516:24: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] > for( k = 0 ; k < _mol->NumAtoms() ; k++ ){ > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/pointgroup.cpp: In member function 'const char* OpenBabel::PointGroupPrivate::identify_point_group()': >/builddir/build/BUILD/openbabel-2.3.2/src/pointgroup.cpp:1770:20: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] > for( i = 0 ; i < PointGroupsCount ; i++ ){ > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/pointgroup.cpp:1783:22: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] > for( i = 0 ; i < PointGroupsCount ; i++ ){ > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/mcdlutil.cpp: In member function 'void OpenBabel::TEditedMolecule::addAsTemplate(OpenBabel::TEditedMolecule&, int, int, int, int, bool)': >/builddir/build/BUILD/openbabel-2.3.2/src/mcdlutil.cpp:4229:16: warning: 'r1' may be used uninitialized in this function [-Wmaybe-uninitialized] > xNew=r1*scale*xu1+this->getAtom(thisAN)->rx; > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/parsmart.cpp: At global scope: >/builddir/build/BUILD/openbabel-2.3.2/src/parsmart.cpp:123:14: warning: 'int OpenBabel::GetVectorBinding()' declared 'static' but never defined [-Wunused-function] > static int GetVectorBinding(); > ^ >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles 47 >[ 13%] Building CXX object src/CMakeFiles/openbabel.dir/query.o >cd /builddir/build/BUILD/openbabel-2.3.2/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -o CMakeFiles/openbabel.dir/query.o -c /builddir/build/BUILD/openbabel-2.3.2/src/query.cpp >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 13%] Building CXX object src/CMakeFiles/openbabel.dir/rand.o >cd /builddir/build/BUILD/openbabel-2.3.2/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -o CMakeFiles/openbabel.dir/rand.o -c /builddir/build/BUILD/openbabel-2.3.2/src/rand.cpp >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 13%] Building CXX object src/CMakeFiles/openbabel.dir/residue.o >cd /builddir/build/BUILD/openbabel-2.3.2/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -o CMakeFiles/openbabel.dir/residue.o -c /builddir/build/BUILD/openbabel-2.3.2/src/residue.cpp >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles 48 >[ 14%] Building CXX object src/CMakeFiles/openbabel.dir/ring.o >cd /builddir/build/BUILD/openbabel-2.3.2/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -o CMakeFiles/openbabel.dir/ring.o -c /builddir/build/BUILD/openbabel-2.3.2/src/ring.cpp >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 14%] Building CXX object src/CMakeFiles/openbabel.dir/rotamer.o >cd /builddir/build/BUILD/openbabel-2.3.2/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -o CMakeFiles/openbabel.dir/rotamer.o -c /builddir/build/BUILD/openbabel-2.3.2/src/rotamer.cpp >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 14%] Building CXX object src/CMakeFiles/openbabel.dir/rotor.o >cd /builddir/build/BUILD/openbabel-2.3.2/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -o CMakeFiles/openbabel.dir/rotor.o -c /builddir/build/BUILD/openbabel-2.3.2/src/rotor.cpp >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles 49 >[ 15%] Building CXX object src/CMakeFiles/openbabel.dir/spectrophore.o >cd /builddir/build/BUILD/openbabel-2.3.2/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -o CMakeFiles/openbabel.dir/spectrophore.o -c /builddir/build/BUILD/openbabel-2.3.2/src/spectrophore.cpp >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 15%] Building CXX object src/CMakeFiles/openbabel.dir/tokenst.o >cd /builddir/build/BUILD/openbabel-2.3.2/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -o CMakeFiles/openbabel.dir/tokenst.o -c /builddir/build/BUILD/openbabel-2.3.2/src/tokenst.cpp >In file included from /builddir/build/BUILD/openbabel-2.3.2/src/spectrophore.cpp:25:0: >/builddir/build/BUILD/openbabel-2.3.2/include/openbabel/spectrophore.h: In constructor 'OpenBabel::OBSpectrophore::OBSpectrophore()': >/builddir/build/BUILD/openbabel-2.3.2/include/openbabel/spectrophore.h:566:31: warning: 'OpenBabel::OBSpectrophore::_numberOfProbes' will be initialized after [-Wreorder] > unsigned int _numberOfProbes; > ^ >/builddir/build/BUILD/openbabel-2.3.2/include/openbabel/spectrophore.h:560:31: warning: 'double** OpenBabel::OBSpectrophore::_property' [-Wreorder] > double** _property; > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/spectrophore.cpp:31:1: warning: when initialized here [-Wreorder] > OBSpectrophore::OBSpectrophore(void) > ^ >In file included from /builddir/build/BUILD/openbabel-2.3.2/src/spectrophore.cpp:25:0: >/builddir/build/BUILD/openbabel-2.3.2/include/openbabel/spectrophore.h: In copy constructor 'OpenBabel::OBSpectrophore::OBSpectrophore(const OpenBabel::OBSpectrophore&)': >/builddir/build/BUILD/openbabel-2.3.2/include/openbabel/spectrophore.h:567:31: warning: 'OpenBabel::OBSpectrophore::_spectro' will be initialized after [-Wreorder] > std::vector<double> _spectro; > ^ >/builddir/build/BUILD/openbabel-2.3.2/include/openbabel/spectrophore.h:560:31: warning: 'double** OpenBabel::OBSpectrophore::_property' [-Wreorder] > double** _property; > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/spectrophore.cpp:48:1: warning: when initialized here [-Wreorder] > OBSpectrophore::OBSpectrophore(const OBSpectrophore& s) > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/spectrophore.cpp: In member function 'void OpenBabel::OBSpectrophore::_luSolve(double**, std::vector<int>&, double*, unsigned int)': >/builddir/build/BUILD/openbabel-2.3.2/src/spectrophore.cpp:1903:21: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] > for (k = 0; k < i; ++k) > ^ >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles 50 >[ 16%] Building CXX object src/CMakeFiles/openbabel.dir/transform.o >cd /builddir/build/BUILD/openbabel-2.3.2/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -o CMakeFiles/openbabel.dir/transform.o -c /builddir/build/BUILD/openbabel-2.3.2/src/transform.cpp >/builddir/build/BUILD/openbabel-2.3.2/src/transform.cpp: In member function 'virtual OpenBabel::OBBase* OpenBabel::OBMol::DoTransformations(const std::map<std::basic_string<char>, std::basic_string<char> >*, OpenBabel::OBConversion*)': >/builddir/build/BUILD/openbabel-2.3.2/src/transform.cpp:200:52: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] > if(itr2!=pOptions->end() && NumHvyAtoms()!=atoi(itr2->second.c_str())) > ^ >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 16%] Building CXX object src/CMakeFiles/openbabel.dir/typer.o >cd /builddir/build/BUILD/openbabel-2.3.2/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -o CMakeFiles/openbabel.dir/typer.o -c /builddir/build/BUILD/openbabel-2.3.2/src/typer.cpp >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 16%] Building CXX object src/CMakeFiles/openbabel.dir/obmolecformat.o >cd /builddir/build/BUILD/openbabel-2.3.2/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -o CMakeFiles/openbabel.dir/obmolecformat.o -c /builddir/build/BUILD/openbabel-2.3.2/src/obmolecformat.cpp >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles 51 >[ 17%] Building CXX object src/CMakeFiles/openbabel.dir/conformersearch.o >cd /builddir/build/BUILD/openbabel-2.3.2/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -o CMakeFiles/openbabel.dir/conformersearch.o -c /builddir/build/BUILD/openbabel-2.3.2/src/conformersearch.cpp >/builddir/build/BUILD/openbabel-2.3.2/src/obmolecformat.cpp: In static member function 'static bool OpenBabel::OBMoleculeFormat::DoOutputOptions(OpenBabel::OBBase*, OpenBabel::OBConversion*)': >/builddir/build/BUILD/openbabel-2.3.2/src/obmolecformat.cpp:208:18: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] > for (; c < pmol->NumConformers()-1; ++c) { > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/obmolecformat.cpp: In static member function 'static bool OpenBabel::OBMoleculeFormat::OutputMolsFromReaction(OpenBabel::OBReaction*, OpenBabel::OBConversion*, OpenBabel::OBFormat*)': >/builddir/build/BUILD/openbabel-2.3.2/src/obmolecformat.cpp:444:14: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] > for(i=0;i<pReact->NumReactants();i++) > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/obmolecformat.cpp:446:14: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] > for(i=0;i<pReact->NumProducts();i++) > ^ >In file included from /builddir/build/BUILD/openbabel-2.3.2/src/conformersearch.cpp:19:0: >/builddir/build/BUILD/openbabel-2.3.2/include/openbabel/conformersearch.h: In member function 'void OpenBabel::OBConformerSearch::SetFilter(OpenBabel::OBConformerFilter*)': >/builddir/build/BUILD/openbabel-2.3.2/include/openbabel/conformersearch.h:260:16: warning: deleting object of abstract class type 'OpenBabel::OBConformerFilter' which has non-virtual destructor will cause undefined behaviour [-Wdelete-non-virtual-dtor] > delete m_filter; > ^ >/builddir/build/BUILD/openbabel-2.3.2/include/openbabel/conformersearch.h: In member function 'void OpenBabel::OBConformerSearch::SetScore(OpenBabel::OBConformerScore*)': >/builddir/build/BUILD/openbabel-2.3.2/include/openbabel/conformersearch.h:274:16: warning: deleting object of abstract class type 'OpenBabel::OBConformerScore' which has non-virtual destructor will cause undefined behaviour [-Wdelete-non-virtual-dtor] > delete m_score; > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/conformersearch.cpp: In destructor 'OpenBabel::OBConformerSearch::~OBConformerSearch()': >/builddir/build/BUILD/openbabel-2.3.2/src/conformersearch.cpp:152:12: warning: deleting object of abstract class type 'OpenBabel::OBConformerFilter' which has non-virtual destructor will cause undefined behaviour [-Wdelete-non-virtual-dtor] > delete m_filter; > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/conformersearch.cpp:153:12: warning: deleting object of abstract class type 'OpenBabel::OBConformerScore' which has non-virtual destructor will cause undefined behaviour [-Wdelete-non-virtual-dtor] > delete m_score; > ^ >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 17%] Building CXX object src/CMakeFiles/openbabel.dir/dlhandler_unix.o >cd /builddir/build/BUILD/openbabel-2.3.2/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -o CMakeFiles/openbabel.dir/dlhandler_unix.o -c /builddir/build/BUILD/openbabel-2.3.2/src/dlhandler_unix.cpp >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 17%] Building CXX object src/CMakeFiles/openbabel.dir/depict/depict.o >cd /builddir/build/BUILD/openbabel-2.3.2/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -o CMakeFiles/openbabel.dir/depict/depict.o -c /builddir/build/BUILD/openbabel-2.3.2/src/depict/depict.cpp >/builddir/build/BUILD/openbabel-2.3.2/src/conformersearch.cpp: In member function 'double OpenBabel::OBConformerSearch::MakeSelection()': >/builddir/build/BUILD/openbabel-2.3.2/src/conformersearch.cpp:314:31: warning: 'highest' may be used uninitialized in this function [-Wmaybe-uninitialized] > double sum = 0.0, lowest, highest; > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/conformersearch.cpp:324:18: warning: 'lowest' may be used uninitialized in this function [-Wmaybe-uninitialized] > if (!i || conformer_scores[i].score < lowest) { > ^ >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles 52 >[ 18%] Building CXX object src/CMakeFiles/openbabel.dir/depict/svgpainter.o >cd /builddir/build/BUILD/openbabel-2.3.2/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -o CMakeFiles/openbabel.dir/depict/svgpainter.o -c /builddir/build/BUILD/openbabel-2.3.2/src/depict/svgpainter.cpp >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 18%] Building CXX object src/CMakeFiles/openbabel.dir/math/matrix3x3.o >cd /builddir/build/BUILD/openbabel-2.3.2/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -o CMakeFiles/openbabel.dir/math/matrix3x3.o -c /builddir/build/BUILD/openbabel-2.3.2/src/math/matrix3x3.cpp >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >/builddir/build/BUILD/openbabel-2.3.2/src/depict/depict.cpp: In function 'unsigned int OpenBabel::GetAtomSymClass(OpenBabel::OBAtom*)': >/builddir/build/BUILD/openbabel-2.3.2/src/depict/depict.cpp:236:11: warning: unused variable 'nclasses' [-Wunused-variable] > int nclasses = end_pos - copy_sym.begin(); > ^ >[ 18%] Building CXX object src/CMakeFiles/openbabel.dir/math/spacegroup.o >cd /builddir/build/BUILD/openbabel-2.3.2/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -o CMakeFiles/openbabel.dir/math/spacegroup.o -c /builddir/build/BUILD/openbabel-2.3.2/src/math/spacegroup.cpp >/builddir/build/BUILD/openbabel-2.3.2/src/depict/depict.cpp: In member function 'void OpenBabel::OBDepictPrivate::DrawAtomLabel(const string&, int, const OpenBabel::vector3&)': >/builddir/build/BUILD/openbabel-2.3.2/src/depict/depict.cpp:868:21: warning: variable 'metrics' set but not used [-Wunused-but-set-variable] > OBFontMetrics metrics = painter->GetFontMetrics(str); > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/depict/depict.cpp:873:21: warning: variable 'metrics' set but not used [-Wunused-but-set-variable] > OBFontMetrics metrics = painter->GetFontMetrics(subscript); > ^ >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles 53 >[ 19%] Building CXX object src/CMakeFiles/openbabel.dir/math/transform3d.o >cd /builddir/build/BUILD/openbabel-2.3.2/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -o CMakeFiles/openbabel.dir/math/transform3d.o -c /builddir/build/BUILD/openbabel-2.3.2/src/math/transform3d.cpp >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 19%] Building CXX object src/CMakeFiles/openbabel.dir/math/vector3.o >cd /builddir/build/BUILD/openbabel-2.3.2/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -o CMakeFiles/openbabel.dir/math/vector3.o -c /builddir/build/BUILD/openbabel-2.3.2/src/math/vector3.cpp >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 19%] Building CXX object src/CMakeFiles/openbabel.dir/math/align.o >cd /builddir/build/BUILD/openbabel-2.3.2/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -o CMakeFiles/openbabel.dir/math/align.o -c /builddir/build/BUILD/openbabel-2.3.2/src/math/align.cpp >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles 54 >[ 20%] Building CXX object src/CMakeFiles/openbabel.dir/stereo/stereo.o >cd /builddir/build/BUILD/openbabel-2.3.2/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -o CMakeFiles/openbabel.dir/stereo/stereo.o -c /builddir/build/BUILD/openbabel-2.3.2/src/stereo/stereo.cpp >/builddir/build/BUILD/openbabel-2.3.2/src/stereo/stereo.cpp: In static member function 'static void OpenBabel::OBStereo::Permutate(OpenBabel::OBStereo::Refs&, int, int)': >/builddir/build/BUILD/openbabel-2.3.2/src/stereo/stereo.cpp:77:20: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] > if (i < 0 || i >= refs.size()) > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/stereo/stereo.cpp:79:20: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] > if (j < 0 || j >= refs.size()) > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/stereo/stereo.cpp: In static member function 'static OpenBabel::OBStereo::Refs OpenBabel::OBStereo::Permutated(const Refs&, int, int)': >/builddir/build/BUILD/openbabel-2.3.2/src/stereo/stereo.cpp:88:20: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] > if (i < 0 || i >= refs.size()) > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/stereo/stereo.cpp:90:20: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] > if (j < 0 || j >= refs.size()) > ^ >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 20%] Building CXX object src/CMakeFiles/openbabel.dir/stereo/tetranonplanar.o >cd /builddir/build/BUILD/openbabel-2.3.2/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -o CMakeFiles/openbabel.dir/stereo/tetranonplanar.o -c /builddir/build/BUILD/openbabel-2.3.2/src/stereo/tetranonplanar.cpp >/builddir/build/BUILD/openbabel-2.3.2/src/math/align.cpp: In member function 'std::vector<OpenBabel::vector3> OpenBabel::OBAlign::GetAlignment()': >/builddir/build/BUILD/openbabel-2.3.2/src/math/align.cpp:272:45: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] > for (vector<vector3>::size_type i=0; i<mtarget.cols(); ++i) > ^ >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 20%] Building CXX object src/CMakeFiles/openbabel.dir/stereo/tetraplanar.o >cd /builddir/build/BUILD/openbabel-2.3.2/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -o CMakeFiles/openbabel.dir/stereo/tetraplanar.o -c /builddir/build/BUILD/openbabel-2.3.2/src/stereo/tetraplanar.cpp >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles 55 >[ 21%] Building CXX object src/CMakeFiles/openbabel.dir/stereo/squareplanar.o >cd /builddir/build/BUILD/openbabel-2.3.2/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -o CMakeFiles/openbabel.dir/stereo/squareplanar.o -c /builddir/build/BUILD/openbabel-2.3.2/src/stereo/squareplanar.cpp >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 21%] Building CXX object src/CMakeFiles/openbabel.dir/stereo/cistrans.o >cd /builddir/build/BUILD/openbabel-2.3.2/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -o CMakeFiles/openbabel.dir/stereo/cistrans.o -c /builddir/build/BUILD/openbabel-2.3.2/src/stereo/cistrans.cpp >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 21%] Building CXX object src/CMakeFiles/openbabel.dir/stereo/tetrahedral.o >cd /builddir/build/BUILD/openbabel-2.3.2/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -o CMakeFiles/openbabel.dir/stereo/tetrahedral.o -c /builddir/build/BUILD/openbabel-2.3.2/src/stereo/tetrahedral.cpp >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles 56 >[ 22%] Building CXX object src/CMakeFiles/openbabel.dir/stereo/perception.o >cd /builddir/build/BUILD/openbabel-2.3.2/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -o CMakeFiles/openbabel.dir/stereo/perception.o -c /builddir/build/BUILD/openbabel-2.3.2/src/stereo/perception.cpp >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 22%] Building CXX object src/CMakeFiles/openbabel.dir/stereo/facade.o >cd /builddir/build/BUILD/openbabel-2.3.2/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMAKE_OBDLL -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -o CMakeFiles/openbabel.dir/stereo/facade.o -c /builddir/build/BUILD/openbabel-2.3.2/src/stereo/facade.cpp >/builddir/build/BUILD/openbabel-2.3.2/src/stereo/perception.cpp: In function 'bool OpenBabel::TetStereoToWedgeHash(OpenBabel::OBMol&, std::map<OpenBabel::OBBond*, OpenBabel::OBStereo::BondDirection>&, std::map<OpenBabel::OBBond*, long unsigned int>&)': >/builddir/build/BUILD/openbabel-2.3.2/src/stereo/perception.cpp:2764:35: warning: 'close_bond_b' may be used uninitialized in this function [-Wmaybe-uninitialized] > if (&*b==close_bond_a || &*b==close_bond_b) > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/stereo/perception.cpp:2764:35: warning: 'close_bond_a' may be used uninitialized in this function [-Wmaybe-uninitialized] >Linking CXX shared library ../lib/libopenbabel.so >cd /builddir/build/BUILD/openbabel-2.3.2/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/openbabel.dir/link.txt --verbose=1 >/usr/bin/c++ -fPIC -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -Wl,-soname,libopenbabel.so.4 -o ../lib/libopenbabel.so.4.0.2 CMakeFiles/openbabel.dir/alias.o CMakeFiles/openbabel.dir/atom.o CMakeFiles/openbabel.dir/base.o CMakeFiles/openbabel.dir/bitvec.o CMakeFiles/openbabel.dir/bond.o CMakeFiles/openbabel.dir/bondtyper.o CMakeFiles/openbabel.dir/builder.o CMakeFiles/openbabel.dir/canon.o CMakeFiles/openbabel.dir/chains.o CMakeFiles/openbabel.dir/chargemodel.o CMakeFiles/openbabel.dir/chiral.o CMakeFiles/openbabel.dir/data.o CMakeFiles/openbabel.dir/descriptor.o CMakeFiles/openbabel.dir/fingerprint.o CMakeFiles/openbabel.dir/forcefield.o CMakeFiles/openbabel.dir/format.o CMakeFiles/openbabel.dir/generic.o CMakeFiles/openbabel.dir/graphsym.o CMakeFiles/openbabel.dir/grid.o CMakeFiles/openbabel.dir/griddata.o CMakeFiles/openbabel.dir/isomorphism.o CMakeFiles/openbabel.dir/kekulize.o CMakeFiles/openbabel.dir/locale.o CMakeFiles/openbabel.dir/matrix.o CMakeFiles/openbabel.dir/mcdlutil.o CMakeFiles/openbabel.dir/molchrg.o CMakeFiles/openbabel.dir/mol.o CMakeFiles/openbabel.dir/obconversion.o CMakeFiles/openbabel.dir/oberror.o CMakeFiles/openbabel.dir/obiter.o CMakeFiles/openbabel.dir/obutil.o CMakeFiles/openbabel.dir/op.o CMakeFiles/openbabel.dir/parsmart.o CMakeFiles/openbabel.dir/patty.o CMakeFiles/openbabel.dir/phmodel.o CMakeFiles/openbabel.dir/plugin.o CMakeFiles/openbabel.dir/pointgroup.o CMakeFiles/openbabel.dir/query.o CMakeFiles/openbabel.dir/rand.o CMakeFiles/openbabel.dir/residue.o CMakeFiles/openbabel.dir/ring.o CMakeFiles/openbabel.dir/rotamer.o CMakeFiles/openbabel.dir/rotor.o CMakeFiles/openbabel.dir/spectrophore.o CMakeFiles/openbabel.dir/tokenst.o CMakeFiles/openbabel.dir/transform.o CMakeFiles/openbabel.dir/typer.o CMakeFiles/openbabel.dir/obmolecformat.o CMakeFiles/openbabel.dir/conformersearch.o CMakeFiles/openbabel.dir/dlhandler_unix.o CMakeFiles/openbabel.dir/depict/depict.o CMakeFiles/openbabel.dir/depict/svgpainter.o CMakeFiles/openbabel.dir/math/matrix3x3.o CMakeFiles/openbabel.dir/math/spacegroup.o CMakeFiles/openbabel.dir/math/transform3d.o CMakeFiles/openbabel.dir/math/vector3.o CMakeFiles/openbabel.dir/math/align.o CMakeFiles/openbabel.dir/stereo/stereo.o CMakeFiles/openbabel.dir/stereo/tetranonplanar.o CMakeFiles/openbabel.dir/stereo/tetraplanar.o CMakeFiles/openbabel.dir/stereo/squareplanar.o CMakeFiles/openbabel.dir/stereo/cistrans.o CMakeFiles/openbabel.dir/stereo/tetrahedral.o CMakeFiles/openbabel.dir/stereo/perception.o CMakeFiles/openbabel.dir/stereo/facade.o -lm -ldl -lz >cd /builddir/build/BUILD/openbabel-2.3.2/src && /usr/bin/cmake -E cmake_symlink_library ../lib/libopenbabel.so.4.0.2 ../lib/libopenbabel.so.4 ../lib/libopenbabel.so >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 >[ 22%] Built target openbabel >make -f src/CMakeFiles/plugin_charges.dir/build.make src/CMakeFiles/plugin_charges.dir/depend >make -f src/CMakeFiles/plugin_descriptors.dir/build.make src/CMakeFiles/plugin_descriptors.dir/depend >make -f src/CMakeFiles/plugin_fingerprints.dir/build.make src/CMakeFiles/plugin_fingerprints.dir/depend >make -f src/CMakeFiles/plugin_forcefields.dir/build.make src/CMakeFiles/plugin_forcefields.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src /builddir/build/BUILD/openbabel-2.3.2/src/CMakeFiles/plugin_charges.dir/DependInfo.cmake --color= >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src /builddir/build/BUILD/openbabel-2.3.2/src/CMakeFiles/plugin_fingerprints.dir/DependInfo.cmake --color= >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src /builddir/build/BUILD/openbabel-2.3.2/src/CMakeFiles/plugin_descriptors.dir/DependInfo.cmake --color= >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src /builddir/build/BUILD/openbabel-2.3.2/src/CMakeFiles/plugin_forcefields.dir/DependInfo.cmake --color= >Dependee "/builddir/build/BUILD/openbabel-2.3.2/src/CMakeFiles/plugin_charges.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/src/CMakeFiles/plugin_charges.dir/depend.internal". >Dependee "/builddir/build/BUILD/openbabel-2.3.2/src/CMakeFiles/plugin_fingerprints.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/src/CMakeFiles/plugin_fingerprints.dir/depend.internal". >Dependee "/builddir/build/BUILD/openbabel-2.3.2/src/CMakeFiles/plugin_descriptors.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/src/CMakeFiles/plugin_descriptors.dir/depend.internal". >Dependee "/builddir/build/BUILD/openbabel-2.3.2/src/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/src/CMakeFiles/plugin_fingerprints.dir/depend.internal". >Dependee "/builddir/build/BUILD/openbabel-2.3.2/src/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/src/CMakeFiles/plugin_descriptors.dir/depend.internal". >Dependee "/builddir/build/BUILD/openbabel-2.3.2/src/CMakeFiles/plugin_forcefields.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/src/CMakeFiles/plugin_forcefields.dir/depend.internal". >Dependee "/builddir/build/BUILD/openbabel-2.3.2/src/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/src/CMakeFiles/plugin_forcefields.dir/depend.internal". >Dependee "/builddir/build/BUILD/openbabel-2.3.2/src/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/src/CMakeFiles/plugin_charges.dir/depend.internal". >Scanning dependencies of target plugin_fingerprints >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f src/CMakeFiles/plugin_fingerprints.dir/build.make src/CMakeFiles/plugin_fingerprints.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >Scanning dependencies of target plugin_descriptors >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f src/CMakeFiles/plugin_descriptors.dir/build.make src/CMakeFiles/plugin_descriptors.dir/build >Scanning dependencies of target plugin_forcefields >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f src/CMakeFiles/plugin_forcefields.dir/build.make src/CMakeFiles/plugin_forcefields.dir/build >[ 22%] make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 22%] [ 22%] Building CXX object src/CMakeFiles/plugin_fingerprints.dir/fingerprints/finger2.o >cd /builddir/build/BUILD/openbabel-2.3.2/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dplugin_fingerprints_EXPORTS -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -o CMakeFiles/plugin_fingerprints.dir/fingerprints/finger2.o -c /builddir/build/BUILD/openbabel-2.3.2/src/fingerprints/finger2.cpp >Building CXX object src/CMakeFiles/plugin_descriptors.dir/descriptors/cansmidescriptor.o >cd /builddir/build/BUILD/openbabel-2.3.2/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dplugin_descriptors_EXPORTS -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -o CMakeFiles/plugin_descriptors.dir/descriptors/cansmidescriptor.o -c /builddir/build/BUILD/openbabel-2.3.2/src/descriptors/cansmidescriptor.cpp >Building CXX object src/CMakeFiles/plugin_forcefields.dir/forcefields/forcefieldgaff.o >cd /builddir/build/BUILD/openbabel-2.3.2/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dplugin_forcefields_EXPORTS -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -o CMakeFiles/plugin_forcefields.dir/forcefields/forcefieldgaff.o -c /builddir/build/BUILD/openbabel-2.3.2/src/forcefields/forcefieldgaff.cpp >Scanning dependencies of target plugin_charges >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f src/CMakeFiles/plugin_charges.dir/build.make src/CMakeFiles/plugin_charges.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 22%] Building CXX object src/CMakeFiles/plugin_charges.dir/charges/eem.o >cd /builddir/build/BUILD/openbabel-2.3.2/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dplugin_charges_EXPORTS -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -o CMakeFiles/plugin_charges.dir/charges/eem.o -c /builddir/build/BUILD/openbabel-2.3.2/src/charges/eem.cpp >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles 61 >[ 23%] Building CXX object src/CMakeFiles/plugin_descriptors.dir/descriptors/cmpdfilter.o >cd /builddir/build/BUILD/openbabel-2.3.2/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dplugin_descriptors_EXPORTS -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -o CMakeFiles/plugin_descriptors.dir/descriptors/cmpdfilter.o -c /builddir/build/BUILD/openbabel-2.3.2/src/descriptors/cmpdfilter.cpp >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 23%] Building CXX object src/CMakeFiles/plugin_charges.dir/charges/gasteiger.o >cd /builddir/build/BUILD/openbabel-2.3.2/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dplugin_charges_EXPORTS -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -o CMakeFiles/plugin_charges.dir/charges/gasteiger.o -c /builddir/build/BUILD/openbabel-2.3.2/src/charges/gasteiger.cpp >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 23%] Building CXX object src/CMakeFiles/plugin_descriptors.dir/descriptors/groupcontrib.o >cd /builddir/build/BUILD/openbabel-2.3.2/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dplugin_descriptors_EXPORTS -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -o CMakeFiles/plugin_descriptors.dir/descriptors/groupcontrib.o -c /builddir/build/BUILD/openbabel-2.3.2/src/descriptors/groupcontrib.cpp >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles 63 >[ 24%] Building CXX object src/CMakeFiles/plugin_fingerprints.dir/fingerprints/finger3.o >cd /builddir/build/BUILD/openbabel-2.3.2/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dplugin_fingerprints_EXPORTS -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -o CMakeFiles/plugin_fingerprints.dir/fingerprints/finger3.o -c /builddir/build/BUILD/openbabel-2.3.2/src/fingerprints/finger3.cpp >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles 59 >[ 25%] Building CXX object src/CMakeFiles/plugin_charges.dir/charges/none.o >cd /builddir/build/BUILD/openbabel-2.3.2/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dplugin_charges_EXPORTS -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -o CMakeFiles/plugin_charges.dir/charges/none.o -c /builddir/build/BUILD/openbabel-2.3.2/src/charges/none.cpp >/builddir/build/BUILD/openbabel-2.3.2/src/fingerprints/finger3.cpp: In member function 'virtual bool OpenBabel::PatternFP::GetFingerprint(OpenBabel::OBBase*, std::vector<unsigned int>&, int)': >/builddir/build/BUILD/openbabel-2.3.2/src/fingerprints/finger3.cpp:108:13: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] > while(n < _bitcount) > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/fingerprints/finger3.cpp: In member function 'virtual std::string OpenBabel::PatternFP::DescribeBits(std::vector<unsigned int>, bool)': >/builddir/build/BUILD/openbabel-2.3.2/src/fingerprints/finger3.cpp:257:36: warning: operation on 'div' may be undefined [-Wsequence-point] > ngrp = (num + div -1)/div--; //rounds up > ^ >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 25%] Building CXX object src/CMakeFiles/plugin_descriptors.dir/descriptors/filters.o >cd /builddir/build/BUILD/openbabel-2.3.2/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dplugin_descriptors_EXPORTS -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -o CMakeFiles/plugin_descriptors.dir/descriptors/filters.o -c /builddir/build/BUILD/openbabel-2.3.2/src/descriptors/filters.cpp >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 25%] Building CXX object src/CMakeFiles/plugin_charges.dir/charges/mmff94.o >cd /builddir/build/BUILD/openbabel-2.3.2/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dplugin_charges_EXPORTS -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -o CMakeFiles/plugin_charges.dir/charges/mmff94.o -c /builddir/build/BUILD/openbabel-2.3.2/src/charges/mmff94.cpp >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles 62 >[ 26%] Building CXX object src/CMakeFiles/plugin_descriptors.dir/descriptors/inchidescriptor.o >cd /builddir/build/BUILD/openbabel-2.3.2/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dplugin_descriptors_EXPORTS -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -o CMakeFiles/plugin_descriptors.dir/descriptors/inchidescriptor.o -c /builddir/build/BUILD/openbabel-2.3.2/src/descriptors/inchidescriptor.cpp >Linking CXX shared module ../lib/plugin_fingerprints.so >cd /builddir/build/BUILD/openbabel-2.3.2/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/plugin_fingerprints.dir/link.txt --verbose=1 >/usr/bin/c++ -fPIC -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -Wl,-soname,plugin_fingerprints.so -o ../lib/plugin_fingerprints.so CMakeFiles/plugin_fingerprints.dir/fingerprints/finger2.o CMakeFiles/plugin_fingerprints.dir/fingerprints/finger3.o -lm -ldl -lz ../lib/libopenbabel.so.4.0.2 -lm -ldl -lz >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles 60 >[ 27%] Building CXX object src/CMakeFiles/plugin_charges.dir/charges/qeq.o >cd /builddir/build/BUILD/openbabel-2.3.2/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dplugin_charges_EXPORTS -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -o CMakeFiles/plugin_charges.dir/charges/qeq.o -c /builddir/build/BUILD/openbabel-2.3.2/src/charges/qeq.cpp >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles 63 >[ 27%] Built target plugin_fingerprints >make -f src/CMakeFiles/plugin_ops.dir/build.make src/CMakeFiles/plugin_ops.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src /builddir/build/BUILD/openbabel-2.3.2/src/CMakeFiles/plugin_ops.dir/DependInfo.cmake --color= >Dependee "/builddir/build/BUILD/openbabel-2.3.2/src/CMakeFiles/plugin_ops.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/src/CMakeFiles/plugin_ops.dir/depend.internal". >Dependee "/builddir/build/BUILD/openbabel-2.3.2/src/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/src/CMakeFiles/plugin_ops.dir/depend.internal". >Scanning dependencies of target plugin_ops >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f src/CMakeFiles/plugin_ops.dir/build.make src/CMakeFiles/plugin_ops.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 27%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/addfilename.o >cd /builddir/build/BUILD/openbabel-2.3.2/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dplugin_ops_EXPORTS -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -o CMakeFiles/plugin_ops.dir/ops/addfilename.o -c /builddir/build/BUILD/openbabel-2.3.2/src/ops/addfilename.cpp >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles 65 >[ 28%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/addinindex.o >cd /builddir/build/BUILD/openbabel-2.3.2/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dplugin_ops_EXPORTS -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -o CMakeFiles/plugin_ops.dir/ops/addinindex.o -c /builddir/build/BUILD/openbabel-2.3.2/src/ops/addinindex.cpp >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 28%] Building CXX object src/CMakeFiles/plugin_descriptors.dir/descriptors/smartsdescriptors.o >cd /builddir/build/BUILD/openbabel-2.3.2/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dplugin_descriptors_EXPORTS -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -o CMakeFiles/plugin_descriptors.dir/descriptors/smartsdescriptors.o -c /builddir/build/BUILD/openbabel-2.3.2/src/descriptors/smartsdescriptors.cpp >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 28%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/addpolarh.o >cd /builddir/build/BUILD/openbabel-2.3.2/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dplugin_ops_EXPORTS -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -o CMakeFiles/plugin_ops.dir/ops/addpolarh.o -c /builddir/build/BUILD/openbabel-2.3.2/src/ops/addpolarh.cpp >Linking CXX shared module ../lib/plugin_descriptors.so >cd /builddir/build/BUILD/openbabel-2.3.2/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/plugin_descriptors.dir/link.txt --verbose=1 >/usr/bin/c++ -fPIC -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -Wl,-soname,plugin_descriptors.so -o ../lib/plugin_descriptors.so CMakeFiles/plugin_descriptors.dir/descriptors/cansmidescriptor.o CMakeFiles/plugin_descriptors.dir/descriptors/cmpdfilter.o CMakeFiles/plugin_descriptors.dir/descriptors/groupcontrib.o CMakeFiles/plugin_descriptors.dir/descriptors/filters.o CMakeFiles/plugin_descriptors.dir/descriptors/inchidescriptor.o CMakeFiles/plugin_descriptors.dir/descriptors/smartsdescriptors.o -lm -ldl -lz ../lib/libopenbabel.so.4.0.2 -lm -ldl -lz >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles 61 62 >[ 28%] Built target plugin_descriptors >make -f src/formats/CMakeFiles/APIInterface.dir/build.make src/formats/CMakeFiles/APIInterface.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/APIInterface.dir/DependInfo.cmake --color= >Dependee "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/APIInterface.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/APIInterface.dir/depend.internal". >Dependee "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/APIInterface.dir/depend.internal". >Scanning dependencies of target APIInterface >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f src/formats/CMakeFiles/APIInterface.dir/build.make src/formats/CMakeFiles/APIInterface.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 28%] Building CXX object src/formats/CMakeFiles/APIInterface.dir/APIInterface.o >cd /builddir/build/BUILD/openbabel-2.3.2/src/formats && /usr/bin/c++ -DAPIInterface_EXPORTS -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -o CMakeFiles/APIInterface.dir/APIInterface.o -c /builddir/build/BUILD/openbabel-2.3.2/src/formats/APIInterface.cpp >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 28%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/canonical.o >cd /builddir/build/BUILD/openbabel-2.3.2/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dplugin_ops_EXPORTS -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -o CMakeFiles/plugin_ops.dir/ops/canonical.o -c /builddir/build/BUILD/openbabel-2.3.2/src/ops/canonical.cpp >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 28%] Building CXX object src/CMakeFiles/plugin_forcefields.dir/forcefields/forcefieldghemical.o >cd /builddir/build/BUILD/openbabel-2.3.2/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dplugin_forcefields_EXPORTS -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -o CMakeFiles/plugin_forcefields.dir/forcefields/forcefieldghemical.o -c /builddir/build/BUILD/openbabel-2.3.2/src/forcefields/forcefieldghemical.cpp >Linking CXX shared module ../../lib/APIInterface.so >cd /builddir/build/BUILD/openbabel-2.3.2/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/APIInterface.dir/link.txt --verbose=1 >/usr/bin/c++ -fPIC -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -Wl,-soname,APIInterface.so -o ../../lib/APIInterface.so CMakeFiles/APIInterface.dir/APIInterface.o -lm -ldl -lz -lcairo -linchi -lm ../../lib/libopenbabel.so.4.0.2 -lm -ldl -lz >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 28%] Built target APIInterface >make -f src/formats/CMakeFiles/CSRformat.dir/build.make src/formats/CMakeFiles/CSRformat.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/CSRformat.dir/DependInfo.cmake --color= >Dependee "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/CSRformat.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/CSRformat.dir/depend.internal". >Dependee "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/CSRformat.dir/depend.internal". >Scanning dependencies of target CSRformat >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f src/formats/CMakeFiles/CSRformat.dir/build.make src/formats/CMakeFiles/CSRformat.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 28%] Building CXX object src/formats/CMakeFiles/CSRformat.dir/CSRformat.o >cd /builddir/build/BUILD/openbabel-2.3.2/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DCSRformat_EXPORTS -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -o CMakeFiles/CSRformat.dir/CSRformat.o -c /builddir/build/BUILD/openbabel-2.3.2/src/formats/CSRformat.cpp >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles 66 >[ 29%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/gen2D.o >cd /builddir/build/BUILD/openbabel-2.3.2/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dplugin_ops_EXPORTS -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -o CMakeFiles/plugin_ops.dir/ops/gen2D.o -c /builddir/build/BUILD/openbabel-2.3.2/src/ops/gen2D.cpp >Linking CXX shared module ../../lib/CSRformat.so >cd /builddir/build/BUILD/openbabel-2.3.2/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/CSRformat.dir/link.txt --verbose=1 >/usr/bin/c++ -fPIC -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -Wl,-soname,CSRformat.so -o ../../lib/CSRformat.so CMakeFiles/CSRformat.dir/CSRformat.o -lm -ldl -lz -lcairo -linchi -lm ../../lib/libopenbabel.so.4.0.2 -lm -ldl -lz >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 29%] Built target CSRformat >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 29%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/fillUC.o >cd /builddir/build/BUILD/openbabel-2.3.2/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dplugin_ops_EXPORTS -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -o CMakeFiles/plugin_ops.dir/ops/fillUC.o -c /builddir/build/BUILD/openbabel-2.3.2/src/ops/fillUC.cpp >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 29%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/forcefield.o >cd /builddir/build/BUILD/openbabel-2.3.2/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dplugin_ops_EXPORTS -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -o CMakeFiles/plugin_ops.dir/ops/forcefield.o -c /builddir/build/BUILD/openbabel-2.3.2/src/ops/forcefield.cpp >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles 67 >[ 30%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/gen3d.o >cd /builddir/build/BUILD/openbabel-2.3.2/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dplugin_ops_EXPORTS -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -o CMakeFiles/plugin_ops.dir/ops/gen3d.o -c /builddir/build/BUILD/openbabel-2.3.2/src/ops/gen3d.cpp >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 30%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/largest.o >cd /builddir/build/BUILD/openbabel-2.3.2/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dplugin_ops_EXPORTS -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -o CMakeFiles/plugin_ops.dir/ops/largest.o -c /builddir/build/BUILD/openbabel-2.3.2/src/ops/largest.cpp >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 30%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/loader.o >cd /builddir/build/BUILD/openbabel-2.3.2/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dplugin_ops_EXPORTS -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -o CMakeFiles/plugin_ops.dir/ops/loader.o -c /builddir/build/BUILD/openbabel-2.3.2/src/ops/loader.cpp >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles 64 >[ 31%] Building CXX object src/CMakeFiles/plugin_forcefields.dir/forcefields/forcefieldmmff94.o >cd /builddir/build/BUILD/openbabel-2.3.2/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dplugin_forcefields_EXPORTS -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -o CMakeFiles/plugin_forcefields.dir/forcefields/forcefieldmmff94.o -c /builddir/build/BUILD/openbabel-2.3.2/src/forcefields/forcefieldmmff94.cpp >make -f src/formats/CMakeFiles/MCDLformat.dir/build.make src/formats/CMakeFiles/MCDLformat.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/MCDLformat.dir/DependInfo.cmake --color= >Dependee "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/MCDLformat.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/MCDLformat.dir/depend.internal". >Dependee "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/MCDLformat.dir/depend.internal". >Scanning dependencies of target MCDLformat >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f src/formats/CMakeFiles/MCDLformat.dir/build.make src/formats/CMakeFiles/MCDLformat.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles 1 >[ 32%] Building CXX object src/formats/CMakeFiles/MCDLformat.dir/MCDLformat.o >cd /builddir/build/BUILD/openbabel-2.3.2/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMCDLformat_EXPORTS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -o CMakeFiles/MCDLformat.dir/MCDLformat.o -c /builddir/build/BUILD/openbabel-2.3.2/src/formats/MCDLformat.cpp >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles 68 >[ 33%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/optransform.o >cd /builddir/build/BUILD/openbabel-2.3.2/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dplugin_ops_EXPORTS -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -o CMakeFiles/plugin_ops.dir/ops/optransform.o -c /builddir/build/BUILD/openbabel-2.3.2/src/ops/optransform.cpp >/builddir/build/BUILD/openbabel-2.3.2/src/forcefields/forcefieldmmff94.cpp: In member function 'virtual bool OpenBabel::OBForceFieldMMFF94::SetupCalculations()': >/builddir/build/BUILD/openbabel-2.3.2/src/forcefields/forcefieldmmff94.cpp:2766:32: warning: variable 'bondtype1' set but not used [-Wunused-but-set-variable] > int angletype, strbndtype, bondtype1, bondtype2; > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/forcefields/forcefieldmmff94.cpp:2766:43: warning: variable 'bondtype2' set but not used [-Wunused-but-set-variable] > int angletype, strbndtype, bondtype1, bondtype2; > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/forcefields/forcefieldmmff94.cpp: In instantiation of 'double OpenBabel::OBForceFieldMMFF94::E_Bond() [with bool <anonymous> = true]': >/builddir/build/BUILD/openbabel-2.3.2/src/forcefields/forcefieldmmff94.h:288:41: required from here >/builddir/build/BUILD/openbabel-2.3.2/src/forcefields/forcefieldmmff94.cpp:140:23: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] > for (int i = 0; i < _bondcalculations.size(); ++i) { > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/forcefields/forcefieldmmff94.cpp: In instantiation of 'double OpenBabel::OBForceFieldMMFF94::E_Bond() [with bool <anonymous> = false]': >/builddir/build/BUILD/openbabel-2.3.2/src/forcefields/forcefieldmmff94.h:288:59: required from here >/builddir/build/BUILD/openbabel-2.3.2/src/forcefields/forcefieldmmff94.cpp:140:23: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] >/builddir/build/BUILD/openbabel-2.3.2/src/forcefields/forcefieldmmff94.cpp: In instantiation of 'double OpenBabel::OBForceFieldMMFF94::E_Angle() [with bool <anonymous> = true]': >/builddir/build/BUILD/openbabel-2.3.2/src/forcefields/forcefieldmmff94.h:294:42: required from here >/builddir/build/BUILD/openbabel-2.3.2/src/forcefields/forcefieldmmff94.cpp:255:23: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] > for (int i = 0; i < _anglecalculations.size(); ++i) { > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/forcefields/forcefieldmmff94.cpp: In instantiation of 'double OpenBabel::OBForceFieldMMFF94::E_Angle() [with bool <anonymous> = false]': >/builddir/build/BUILD/openbabel-2.3.2/src/forcefields/forcefieldmmff94.h:294:61: required from here >/builddir/build/BUILD/openbabel-2.3.2/src/forcefields/forcefieldmmff94.cpp:255:23: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] >/builddir/build/BUILD/openbabel-2.3.2/src/forcefields/forcefieldmmff94.cpp: In instantiation of 'double OpenBabel::OBForceFieldMMFF94::E_StrBnd() [with bool <anonymous> = true]': >/builddir/build/BUILD/openbabel-2.3.2/src/forcefields/forcefieldmmff94.h:300:43: required from here >/builddir/build/BUILD/openbabel-2.3.2/src/forcefields/forcefieldmmff94.cpp:368:23: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] > for (int i = 0; i < _strbndcalculations.size(); ++i) { > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/forcefields/forcefieldmmff94.cpp: In instantiation of 'double OpenBabel::OBForceFieldMMFF94::E_StrBnd() [with bool <anonymous> = false]': >/builddir/build/BUILD/openbabel-2.3.2/src/forcefields/forcefieldmmff94.h:300:63: required from here >/builddir/build/BUILD/openbabel-2.3.2/src/forcefields/forcefieldmmff94.cpp:368:23: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] >/builddir/build/BUILD/openbabel-2.3.2/src/forcefields/forcefieldmmff94.cpp: In instantiation of 'double OpenBabel::OBForceFieldMMFF94::E_Torsion() [with bool <anonymous> = true]': >/builddir/build/BUILD/openbabel-2.3.2/src/forcefields/forcefieldmmff94.h:306:44: required from here >/builddir/build/BUILD/openbabel-2.3.2/src/forcefields/forcefieldmmff94.cpp:504:23: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] > for (int i = 0; i < _torsioncalculations.size(); ++i) { > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/forcefields/forcefieldmmff94.cpp: In instantiation of 'double OpenBabel::OBForceFieldMMFF94::E_Torsion() [with bool <anonymous> = false]': >/builddir/build/BUILD/openbabel-2.3.2/src/forcefields/forcefieldmmff94.h:306:65: required from here >/builddir/build/BUILD/openbabel-2.3.2/src/forcefields/forcefieldmmff94.cpp:504:23: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] >/builddir/build/BUILD/openbabel-2.3.2/src/forcefields/forcefieldmmff94.cpp: In instantiation of 'double OpenBabel::OBForceFieldMMFF94::E_OOP() [with bool <anonymous> = true]': >/builddir/build/BUILD/openbabel-2.3.2/src/forcefields/forcefieldmmff94.h:312:40: required from here >/builddir/build/BUILD/openbabel-2.3.2/src/forcefields/forcefieldmmff94.cpp:602:23: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] > for (int i = 0; i < _oopcalculations.size(); ++i) { > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/forcefields/forcefieldmmff94.cpp: In instantiation of 'double OpenBabel::OBForceFieldMMFF94::E_OOP() [with bool <anonymous> = false]': >/builddir/build/BUILD/openbabel-2.3.2/src/forcefields/forcefieldmmff94.h:312:57: required from here >/builddir/build/BUILD/openbabel-2.3.2/src/forcefields/forcefieldmmff94.cpp:602:23: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] >/builddir/build/BUILD/openbabel-2.3.2/src/forcefields/forcefieldmmff94.cpp: In instantiation of 'double OpenBabel::OBForceFieldMMFF94::E_VDW() [with bool <anonymous> = true]': >/builddir/build/BUILD/openbabel-2.3.2/src/forcefields/forcefieldmmff94.h:318:40: required from here >/builddir/build/BUILD/openbabel-2.3.2/src/forcefields/forcefieldmmff94.cpp:699:23: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] > for (int i = 0; i < _vdwcalculations.size(); ++i) { > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/forcefields/forcefieldmmff94.cpp: In instantiation of 'double OpenBabel::OBForceFieldMMFF94::E_VDW() [with bool <anonymous> = false]': >/builddir/build/BUILD/openbabel-2.3.2/src/forcefields/forcefieldmmff94.h:318:57: required from here >/builddir/build/BUILD/openbabel-2.3.2/src/forcefields/forcefieldmmff94.cpp:699:23: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] >/builddir/build/BUILD/openbabel-2.3.2/src/forcefields/forcefieldmmff94.cpp: In instantiation of 'double OpenBabel::OBForceFieldMMFF94::E_Electrostatic() [with bool <anonymous> = true]': >/builddir/build/BUILD/openbabel-2.3.2/src/forcefields/forcefieldmmff94.h:324:50: required from here >/builddir/build/BUILD/openbabel-2.3.2/src/forcefields/forcefieldmmff94.cpp:785:23: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] > for (int i = 0; i < _electrostaticcalculations.size(); ++i) { > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/forcefields/forcefieldmmff94.cpp: In instantiation of 'double OpenBabel::OBForceFieldMMFF94::E_Electrostatic() [with bool <anonymous> = false]': >/builddir/build/BUILD/openbabel-2.3.2/src/forcefields/forcefieldmmff94.h:324:77: required from here >/builddir/build/BUILD/openbabel-2.3.2/src/forcefields/forcefieldmmff94.cpp:785:23: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] >/builddir/build/BUILD/openbabel-2.3.2/src/formats/MCDLformat.cpp: In member function 'std::string OpenBabel::MCDLFormat::getMCDL(OpenBabel::OBMol*, bool)': >/builddir/build/BUILD/openbabel-2.3.2/src/formats/MCDLformat.cpp:529:10: warning: variable 'test' set but not used [-Wunused-but-set-variable] > bool test;//, testParity; > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/formats/MCDLformat.cpp: In member function 'void OpenBabel::MCDLFormat::setMCDL(std::string, OpenBabel::OBMol*, std::string&)': >/builddir/build/BUILD/openbabel-2.3.2/src/formats/MCDLformat.cpp:1266:15: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] > if (nPrev == acount) { > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/formats/MCDLformat.cpp: In member function 'int OpenBabel::MCDLFormat::indexOf(std::string, std::string, int)': >/builddir/build/BUILD/openbabel-2.3.2/src/formats/MCDLformat.cpp:1384:16: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] > if (result == string::npos) result=-1; > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/formats/MCDLformat.cpp:1385:16: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] > if (result >= instring.length()) result=-1; > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/formats/MCDLformat.cpp: In member function 'int OpenBabel::MCDLFormat::lastIndexOf(std::string, std::string)': >/builddir/build/BUILD/openbabel-2.3.2/src/formats/MCDLformat.cpp:1398:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] > if (n == string::npos) > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/formats/MCDLformat.cpp: In member function 'void OpenBabel::MCDLFormat::solve(int, int (*)[4], int)': >/builddir/build/BUILD/openbabel-2.3.2/src/formats/MCDLformat.cpp:394:35: warning: 'jump' may be used uninitialized in this function [-Wmaybe-uninitialized] > ix[i] = mx[i] + jump + 1; > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/formats/MCDLformat.cpp:385:13: warning: 'numdups' may be used uninitialized in this function [-Wmaybe-uninitialized] > for (j=0; j<numdups; j++) > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/formats/MCDLformat.cpp:395:22: warning: 'dupfrag' may be used uninitialized in this function [-Wmaybe-uninitialized] > else if (ix[i] == dupfrag && j != dupnum) > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/forcefields/forcefieldmmff94.cpp: In member function 'bool OpenBabel::OBForceFieldMMFF94::PerceiveAromatic()': >/builddir/build/BUILD/openbabel-2.3.2/src/forcefields/forcefieldmmff94.cpp:1443:47: warning: 'first_rj' may be used uninitialized in this function [-Wmaybe-uninitialized] > ringbond = _mol.GetBond(first_rj, index); > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/forcefields/forcefieldmmff94.cpp:1443:47: warning: 'index' may be used uninitialized in this function [-Wmaybe-uninitialized] >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 33%] Building CXX object src/CMakeFiles/plugin_charges.dir/charges/qtpie.o >cd /builddir/build/BUILD/openbabel-2.3.2/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dplugin_charges_EXPORTS -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -o CMakeFiles/plugin_charges.dir/charges/qtpie.o -c /builddir/build/BUILD/openbabel-2.3.2/src/charges/qtpie.cpp >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 33%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/partialcharges.o >cd /builddir/build/BUILD/openbabel-2.3.2/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dplugin_ops_EXPORTS -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -o CMakeFiles/plugin_ops.dir/ops/partialcharges.o -c /builddir/build/BUILD/openbabel-2.3.2/src/ops/partialcharges.cpp >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 33%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/readconformers.o >cd /builddir/build/BUILD/openbabel-2.3.2/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dplugin_ops_EXPORTS -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -o CMakeFiles/plugin_ops.dir/ops/readconformers.o -c /builddir/build/BUILD/openbabel-2.3.2/src/ops/readconformers.cpp >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles 69 >[ 34%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/sort.o >cd /builddir/build/BUILD/openbabel-2.3.2/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dplugin_ops_EXPORTS -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -o CMakeFiles/plugin_ops.dir/ops/sort.o -c /builddir/build/BUILD/openbabel-2.3.2/src/ops/sort.cpp >Linking CXX shared module ../../lib/MCDLformat.so >cd /builddir/build/BUILD/openbabel-2.3.2/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/MCDLformat.dir/link.txt --verbose=1 >/usr/bin/c++ -fPIC -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -Wl,-soname,MCDLformat.so -o ../../lib/MCDLformat.so CMakeFiles/MCDLformat.dir/MCDLformat.o -lm -ldl -lz -lcairo -linchi -lm ../../lib/libopenbabel.so.4.0.2 -lm -ldl -lz >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles 1 >[ 34%] Built target MCDLformat >make -f src/formats/CMakeFiles/MNAformat.dir/build.make src/formats/CMakeFiles/MNAformat.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/MNAformat.dir/DependInfo.cmake --color= >Dependee "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/MNAformat.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/MNAformat.dir/depend.internal". >Dependee "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/MNAformat.dir/depend.internal". >Scanning dependencies of target MNAformat >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f src/formats/CMakeFiles/MNAformat.dir/build.make src/formats/CMakeFiles/MNAformat.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 34%] Building CXX object src/formats/CMakeFiles/MNAformat.dir/MNAformat.o >cd /builddir/build/BUILD/openbabel-2.3.2/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DMNAformat_EXPORTS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -o CMakeFiles/MNAformat.dir/MNAformat.o -c /builddir/build/BUILD/openbabel-2.3.2/src/formats/MNAformat.cpp >/builddir/build/BUILD/openbabel-2.3.2/src/forcefields/forcefieldmmff94.cpp: In member function 'virtual bool OpenBabel::OBForceFieldMMFF94::Validate()': >/builddir/build/BUILD/openbabel-2.3.2/src/forcefields/forcefieldmmff94.cpp:4281:40: warning: 'eeq' may be used uninitialized in this function [-Wmaybe-uninitialized] > delta = (E_Electrostatic() - eeq); > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/forcefields/forcefieldmmff94.cpp:4277:31: warning: 'evdw' may be used uninitialized in this function [-Wmaybe-uninitialized] > delta = (E_VDW() - evdw); > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/forcefields/forcefieldmmff94.cpp:4273:35: warning: 'etor' may be used uninitialized in this function [-Wmaybe-uninitialized] > delta = (E_Torsion() - etor); > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/forcefields/forcefieldmmff94.cpp:4265:35: warning: 'estbn' may be used uninitialized in this function [-Wmaybe-uninitialized] > delta = (E_StrBnd() - estbn); > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/forcefields/forcefieldmmff94.cpp:4269:31: warning: 'eoop' may be used uninitialized in this function [-Wmaybe-uninitialized] > delta = (E_OOP() - eoop); > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/forcefields/forcefieldmmff94.cpp:4261:35: warning: 'eangle' may be used uninitialized in this function [-Wmaybe-uninitialized] > delta = (E_Angle() - eangle); > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/forcefields/forcefieldmmff94.cpp:4257:33: warning: 'ebond' may be used uninitialized in this function [-Wmaybe-uninitialized] > delta = (E_Bond() - ebond); > ^ >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 34%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/opisomorph.o >cd /builddir/build/BUILD/openbabel-2.3.2/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dplugin_ops_EXPORTS -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -o CMakeFiles/plugin_ops.dir/ops/opisomorph.o -c /builddir/build/BUILD/openbabel-2.3.2/src/ops/opisomorph.cpp >/builddir/build/BUILD/openbabel-2.3.2/src/ops/opisomorph.cpp: In member function 'virtual bool OpenBabel::OpNewS::Do(OpenBabel::OBBase*, const char*, OpenBabel::OBOp::OpMap*, OpenBabel::OBConversion*)': >/builddir/build/BUILD/openbabel-2.3.2/src/ops/opisomorph.cpp:230:28: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] > if(pmol->NumHvyAtoms() != nPatternAtoms) > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/ops/opisomorph.cpp:286:15: warning: suggest parentheses around '&&' within '||' [-Wparentheses] > if(!showAll && (!match && !inv) || (match && inv)) > ^ >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 34%] Building CXX object src/CMakeFiles/plugin_forcefields.dir/forcefields/forcefielduff.o >cd /builddir/build/BUILD/openbabel-2.3.2/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dplugin_forcefields_EXPORTS -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -o CMakeFiles/plugin_forcefields.dir/forcefields/forcefielduff.o -c /builddir/build/BUILD/openbabel-2.3.2/src/forcefields/forcefielduff.cpp >/builddir/build/BUILD/openbabel-2.3.2/src/forcefields/forcefielduff.cpp: In instantiation of 'void OpenBabel::OBFFVDWCalculationUFF::Compute() [with bool <anonymous> = true]': >/builddir/build/BUILD/openbabel-2.3.2/src/forcefields/forcefielduff.cpp:466:7: required from 'double OpenBabel::OBForceFieldUFF::E_VDW() [with bool <anonymous> = true]' >/builddir/build/BUILD/openbabel-2.3.2/src/forcefields/forcefielduff.h:190:38: required from here >/builddir/build/BUILD/openbabel-2.3.2/src/forcefields/forcefielduff.cpp:419:14: warning: unused variable 'ab' [-Wunused-variable] > double ab[3]; > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/forcefields/forcefielduff.cpp: In instantiation of 'void OpenBabel::OBFFVDWCalculationUFF::Compute() [with bool <anonymous> = false]': >/builddir/build/BUILD/openbabel-2.3.2/src/forcefields/forcefielduff.cpp:466:7: required from 'double OpenBabel::OBForceFieldUFF::E_VDW() [with bool <anonymous> = false]' >/builddir/build/BUILD/openbabel-2.3.2/src/forcefields/forcefielduff.h:190:55: required from here >/builddir/build/BUILD/openbabel-2.3.2/src/forcefields/forcefielduff.cpp:419:14: warning: unused variable 'ab' [-Wunused-variable] >Linking CXX shared module ../../lib/MNAformat.so >cd /builddir/build/BUILD/openbabel-2.3.2/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/MNAformat.dir/link.txt --verbose=1 >/usr/bin/c++ -fPIC -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -Wl,-soname,MNAformat.so -o ../../lib/MNAformat.so CMakeFiles/MNAformat.dir/MNAformat.o -lm -ldl -lz -lcairo -linchi -lm ../../lib/libopenbabel.so.4.0.2 -lm -ldl -lz >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 34%] Built target MNAformat >make -f src/formats/CMakeFiles/PQSformat.dir/build.make src/formats/CMakeFiles/PQSformat.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/PQSformat.dir/DependInfo.cmake --color= >Dependee "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/PQSformat.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/PQSformat.dir/depend.internal". >Dependee "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/PQSformat.dir/depend.internal". >Scanning dependencies of target PQSformat >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f src/formats/CMakeFiles/PQSformat.dir/build.make src/formats/CMakeFiles/PQSformat.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 34%] Building CXX object src/formats/CMakeFiles/PQSformat.dir/PQSformat.o >cd /builddir/build/BUILD/openbabel-2.3.2/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DPQSformat_EXPORTS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -o CMakeFiles/PQSformat.dir/PQSformat.o -c /builddir/build/BUILD/openbabel-2.3.2/src/formats/PQSformat.cpp >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles 70 >[ 35%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/ophighlight.o >cd /builddir/build/BUILD/openbabel-2.3.2/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dplugin_ops_EXPORTS -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -o CMakeFiles/plugin_ops.dir/ops/ophighlight.o -c /builddir/build/BUILD/openbabel-2.3.2/src/ops/ophighlight.cpp >/builddir/build/BUILD/openbabel-2.3.2/src/ops/ophighlight.cpp: In member function 'virtual bool OpenBabel::OpHighlight::Do(OpenBabel::OBBase*, const char*, OpenBabel::OBOp::OpMap*, OpenBabel::OBConversion*)': >/builddir/build/BUILD/openbabel-2.3.2/src/ops/ophighlight.cpp:71:27: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] > for(int vecIdx=0; vecIdx<vec.size(); vecIdx+=2) > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/ops/ophighlight.cpp:75:19: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] > if(vecIdx + 1 == vec.size()) > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/ops/ophighlight.cpp: In member function 'bool OpenBabel::OpHighlight::AddDataToSubstruct(OpenBabel::OBMol*, const std::vector<int>&, const string&, const string&)': >/builddir/build/BUILD/openbabel-2.3.2/src/ops/ophighlight.cpp:132:17: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] > for(int j=0; j<atomIdxs.size(); ++j) > ^ >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >/builddir/build/BUILD/openbabel-2.3.2/src/formats/PQSformat.cpp: In member function 'virtual bool OpenBabel::PQSFormat::ReadMolecule(OpenBabel::OBBase*, OpenBabel::OBConversion*)': >/builddir/build/BUILD/openbabel-2.3.2/src/formats/PQSformat.cpp:259:65: warning: 'pFormat' may be used uninitialized in this function [-Wmaybe-uninitialized] > return pFormat->ReadMolecule(&mol,&coordconv); > ^ >[ 35%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/xout.o >cd /builddir/build/BUILD/openbabel-2.3.2/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dplugin_ops_EXPORTS -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -o CMakeFiles/plugin_ops.dir/ops/xout.o -c /builddir/build/BUILD/openbabel-2.3.2/src/ops/xout.cpp >Linking CXX shared module ../../lib/PQSformat.so >cd /builddir/build/BUILD/openbabel-2.3.2/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/PQSformat.dir/link.txt --verbose=1 >/usr/bin/c++ -fPIC -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -Wl,-soname,PQSformat.so -o ../../lib/PQSformat.so CMakeFiles/PQSformat.dir/PQSformat.o -lm -ldl -lz -lcairo -linchi -lm ../../lib/libopenbabel.so.4.0.2 -lm -ldl -lz >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 35%] Built target PQSformat >make -f src/formats/CMakeFiles/abinitformat.dir/build.make src/formats/CMakeFiles/abinitformat.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/abinitformat.dir/DependInfo.cmake --color= >Dependee "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/abinitformat.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/abinitformat.dir/depend.internal". >Dependee "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/abinitformat.dir/depend.internal". >Scanning dependencies of target abinitformat >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f src/formats/CMakeFiles/abinitformat.dir/build.make src/formats/CMakeFiles/abinitformat.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles 2 >[ 36%] Building CXX object src/formats/CMakeFiles/abinitformat.dir/abinitformat.o >cd /builddir/build/BUILD/openbabel-2.3.2/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dabinitformat_EXPORTS -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -o CMakeFiles/abinitformat.dir/abinitformat.o -c /builddir/build/BUILD/openbabel-2.3.2/src/formats/abinitformat.cpp >/builddir/build/BUILD/openbabel-2.3.2/src/ops/xout.cpp: In member function 'virtual bool OpenBabel::ExtraFormat::WriteChemObject(OpenBabel::OBConversion*)': >/builddir/build/BUILD/openbabel-2.3.2/src/ops/xout.cpp:71:42: warning: 'pMolCopy' may be used uninitialized in this function [-Wmaybe-uninitialized] > _pOrigConv->AddChemObject(pMolCopy); //dummy add to empty queue > ^ >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 36%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/conformer.o >cd /builddir/build/BUILD/openbabel-2.3.2/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dplugin_ops_EXPORTS -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -o CMakeFiles/plugin_ops.dir/ops/conformer.o -c /builddir/build/BUILD/openbabel-2.3.2/src/ops/conformer.cpp >Linking CXX shared module ../lib/plugin_charges.so >cd /builddir/build/BUILD/openbabel-2.3.2/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/plugin_charges.dir/link.txt --verbose=1 >/usr/bin/c++ -fPIC -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -Wl,-soname,plugin_charges.so -o ../lib/plugin_charges.so CMakeFiles/plugin_charges.dir/charges/eem.o CMakeFiles/plugin_charges.dir/charges/gasteiger.o CMakeFiles/plugin_charges.dir/charges/none.o CMakeFiles/plugin_charges.dir/charges/mmff94.o CMakeFiles/plugin_charges.dir/charges/qeq.o CMakeFiles/plugin_charges.dir/charges/qtpie.o -lm -ldl -lz ../lib/libopenbabel.so.4.0.2 -lm -ldl -lz >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles 59 60 >[ 36%] Built target plugin_charges >make -f src/formats/CMakeFiles/acesformat.dir/build.make src/formats/CMakeFiles/acesformat.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/acesformat.dir/DependInfo.cmake --color= >Dependee "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/acesformat.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/acesformat.dir/depend.internal". >Dependee "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/acesformat.dir/depend.internal". >Scanning dependencies of target acesformat >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f src/formats/CMakeFiles/acesformat.dir/build.make src/formats/CMakeFiles/acesformat.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 36%] Building CXX object src/formats/CMakeFiles/acesformat.dir/acesformat.o >cd /builddir/build/BUILD/openbabel-2.3.2/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dacesformat_EXPORTS -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -o CMakeFiles/acesformat.dir/acesformat.o -c /builddir/build/BUILD/openbabel-2.3.2/src/formats/acesformat.cpp >In file included from /builddir/build/BUILD/openbabel-2.3.2/src/ops/conformer.cpp:32:0: >/builddir/build/BUILD/openbabel-2.3.2/include/openbabel/conformersearch.h: In member function 'void OpenBabel::OBConformerSearch::SetFilter(OpenBabel::OBConformerFilter*)': >/builddir/build/BUILD/openbabel-2.3.2/include/openbabel/conformersearch.h:260:16: warning: deleting object of abstract class type 'OpenBabel::OBConformerFilter' which has non-virtual destructor will cause undefined behaviour [-Wdelete-non-virtual-dtor] > delete m_filter; > ^ >/builddir/build/BUILD/openbabel-2.3.2/include/openbabel/conformersearch.h: In member function 'void OpenBabel::OBConformerSearch::SetScore(OpenBabel::OBConformerScore*)': >/builddir/build/BUILD/openbabel-2.3.2/include/openbabel/conformersearch.h:274:16: warning: deleting object of abstract class type 'OpenBabel::OBConformerScore' which has non-virtual destructor will cause undefined behaviour [-Wdelete-non-virtual-dtor] > delete m_score; > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/formats/abinitformat.cpp: In member function 'virtual bool OpenBabel::ABINITFormat::ReadMolecule(OpenBabel::OBBase*, OpenBabel::OBConversion*)': >/builddir/build/BUILD/openbabel-2.3.2/src/formats/abinitformat.cpp:183:5: warning: 'natom' may be used uninitialized in this function [-Wmaybe-uninitialized] > for (int i = 0; i < natom; ++i) { > ^ >Linking CXX shared module ../../lib/abinitformat.so >cd /builddir/build/BUILD/openbabel-2.3.2/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/abinitformat.dir/link.txt --verbose=1 >/usr/bin/c++ -fPIC -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -Wl,-soname,abinitformat.so -o ../../lib/abinitformat.so CMakeFiles/abinitformat.dir/abinitformat.o -lm -ldl -lz -lcairo -linchi -lm ../../lib/libopenbabel.so.4.0.2 -lm -ldl -lz >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles 2 >[ 36%] Built target abinitformat >make -f src/formats/CMakeFiles/acrformat.dir/build.make src/formats/CMakeFiles/acrformat.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/acrformat.dir/DependInfo.cmake --color= >Dependee "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/acrformat.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/acrformat.dir/depend.internal". >Dependee "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/acrformat.dir/depend.internal". >Scanning dependencies of target acrformat >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f src/formats/CMakeFiles/acrformat.dir/build.make src/formats/CMakeFiles/acrformat.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 36%] Building CXX object src/formats/CMakeFiles/acrformat.dir/acrformat.o >cd /builddir/build/BUILD/openbabel-2.3.2/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dacrformat_EXPORTS -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -o CMakeFiles/acrformat.dir/acrformat.o -c /builddir/build/BUILD/openbabel-2.3.2/src/formats/acrformat.cpp >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles 71 >[ 37%] Building CXX object src/CMakeFiles/plugin_ops.dir/ops/opalign.o >cd /builddir/build/BUILD/openbabel-2.3.2/src && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dplugin_ops_EXPORTS -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -o CMakeFiles/plugin_ops.dir/ops/opalign.o -c /builddir/build/BUILD/openbabel-2.3.2/src/ops/opalign.cpp >/builddir/build/BUILD/openbabel-2.3.2/src/formats/acrformat.cpp: In member function 'virtual bool OpenBabel::ACRFormat::ReadMolecule(OpenBabel::OBBase*, OpenBabel::OBConversion*)': >/builddir/build/BUILD/openbabel-2.3.2/src/formats/acrformat.cpp:137:39: warning: 'scale' may be used uninitialized in this function [-Wmaybe-uninitialized] > X = atof((char*)vs[6].c_str())/scale; > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/formats/acrformat.cpp:159:5: warning: 'bonds' may be used uninitialized in this function [-Wmaybe-uninitialized] > if ( pmol->NumBonds() != bonds ) { > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/formats/acrformat.cpp:163:12: warning: 'atoms' may be used uninitialized in this function [-Wmaybe-uninitialized] > } else if ( pmol->NumAtoms() != atoms ) { > ^ >Linking CXX shared module ../../lib/acrformat.so >cd /builddir/build/BUILD/openbabel-2.3.2/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/acrformat.dir/link.txt --verbose=1 >/usr/bin/c++ -fPIC -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -Wl,-soname,acrformat.so -o ../../lib/acrformat.so CMakeFiles/acrformat.dir/acrformat.o -lm -ldl -lz -lcairo -linchi -lm ../../lib/libopenbabel.so.4.0.2 -lm -ldl -lz >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 37%] Built target acrformat >make -f src/formats/CMakeFiles/adfformat.dir/build.make src/formats/CMakeFiles/adfformat.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/adfformat.dir/DependInfo.cmake --color= >Dependee "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/adfformat.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/adfformat.dir/depend.internal". >Dependee "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/adfformat.dir/depend.internal". >Scanning dependencies of target adfformat >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f src/formats/CMakeFiles/adfformat.dir/build.make src/formats/CMakeFiles/adfformat.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles 3 >[ 38%] Building CXX object src/formats/CMakeFiles/adfformat.dir/adfformat.o >cd /builddir/build/BUILD/openbabel-2.3.2/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dadfformat_EXPORTS -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -o CMakeFiles/adfformat.dir/adfformat.o -c /builddir/build/BUILD/openbabel-2.3.2/src/formats/adfformat.cpp >Linking CXX shared module ../../lib/acesformat.so >cd /builddir/build/BUILD/openbabel-2.3.2/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/acesformat.dir/link.txt --verbose=1 >/usr/bin/c++ -fPIC -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -Wl,-soname,acesformat.so -o ../../lib/acesformat.so CMakeFiles/acesformat.dir/acesformat.o -lm -ldl -lz -lcairo -linchi -lm ../../lib/libopenbabel.so.4.0.2 -lm -ldl -lz >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 38%] Built target acesformat >make -f src/formats/CMakeFiles/alchemyformat.dir/build.make src/formats/CMakeFiles/alchemyformat.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/alchemyformat.dir/DependInfo.cmake --color= >Dependee "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/alchemyformat.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/alchemyformat.dir/depend.internal". >Dependee "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/alchemyformat.dir/depend.internal". >Scanning dependencies of target alchemyformat >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f src/formats/CMakeFiles/alchemyformat.dir/build.make src/formats/CMakeFiles/alchemyformat.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 38%] Building CXX object src/formats/CMakeFiles/alchemyformat.dir/alchemyformat.o >cd /builddir/build/BUILD/openbabel-2.3.2/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dalchemyformat_EXPORTS -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -o CMakeFiles/alchemyformat.dir/alchemyformat.o -c /builddir/build/BUILD/openbabel-2.3.2/src/formats/alchemyformat.cpp >Linking CXX shared module ../lib/plugin_forcefields.so >cd /builddir/build/BUILD/openbabel-2.3.2/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/plugin_forcefields.dir/link.txt --verbose=1 >/usr/bin/c++ -fPIC -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -Wl,-soname,plugin_forcefields.so -o ../lib/plugin_forcefields.so CMakeFiles/plugin_forcefields.dir/forcefields/forcefieldgaff.o CMakeFiles/plugin_forcefields.dir/forcefields/forcefieldghemical.o CMakeFiles/plugin_forcefields.dir/forcefields/forcefieldmmff94.o CMakeFiles/plugin_forcefields.dir/forcefields/forcefielduff.o -lm -ldl -lz ../lib/libopenbabel.so.4.0.2 -lm -ldl -lz >Linking CXX shared module ../lib/plugin_ops.so >cd /builddir/build/BUILD/openbabel-2.3.2/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/plugin_ops.dir/link.txt --verbose=1 >/usr/bin/c++ -fPIC -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -Wl,-soname,plugin_ops.so -o ../lib/plugin_ops.so CMakeFiles/plugin_ops.dir/ops/addfilename.o CMakeFiles/plugin_ops.dir/ops/addinindex.o CMakeFiles/plugin_ops.dir/ops/addpolarh.o CMakeFiles/plugin_ops.dir/ops/canonical.o CMakeFiles/plugin_ops.dir/ops/gen2D.o CMakeFiles/plugin_ops.dir/ops/fillUC.o CMakeFiles/plugin_ops.dir/ops/forcefield.o CMakeFiles/plugin_ops.dir/ops/gen3d.o CMakeFiles/plugin_ops.dir/ops/largest.o CMakeFiles/plugin_ops.dir/ops/loader.o CMakeFiles/plugin_ops.dir/ops/optransform.o CMakeFiles/plugin_ops.dir/ops/partialcharges.o CMakeFiles/plugin_ops.dir/ops/readconformers.o CMakeFiles/plugin_ops.dir/ops/sort.o CMakeFiles/plugin_ops.dir/ops/opisomorph.o CMakeFiles/plugin_ops.dir/ops/ophighlight.o CMakeFiles/plugin_ops.dir/ops/xout.o CMakeFiles/plugin_ops.dir/ops/conformer.o CMakeFiles/plugin_ops.dir/ops/opalign.o -lm -ldl -lz ../lib/libopenbabel.so.4.0.2 -lm -ldl -lz >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles 64 >[ 38%] Built target plugin_forcefields >make -f src/formats/CMakeFiles/amberformat.dir/build.make src/formats/CMakeFiles/amberformat.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/amberformat.dir/DependInfo.cmake --color= >Dependee "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/amberformat.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/amberformat.dir/depend.internal". >Dependee "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/amberformat.dir/depend.internal". >Scanning dependencies of target amberformat >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f src/formats/CMakeFiles/amberformat.dir/build.make src/formats/CMakeFiles/amberformat.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 38%] Building CXX object src/formats/CMakeFiles/amberformat.dir/amberformat.o >cd /builddir/build/BUILD/openbabel-2.3.2/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Damberformat_EXPORTS -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -o CMakeFiles/amberformat.dir/amberformat.o -c /builddir/build/BUILD/openbabel-2.3.2/src/formats/amberformat.cpp >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles 65 66 67 68 69 70 71 >[ 38%] Built target plugin_ops >make -f src/formats/CMakeFiles/asciiformat.dir/build.make src/formats/CMakeFiles/asciiformat.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/asciiformat.dir/DependInfo.cmake --color= >Dependee "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/asciiformat.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/asciiformat.dir/depend.internal". >Dependee "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/asciiformat.dir/depend.internal". >Scanning dependencies of target asciiformat >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f src/formats/CMakeFiles/asciiformat.dir/build.make src/formats/CMakeFiles/asciiformat.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles 4 >[ 39%] Building CXX object src/formats/CMakeFiles/asciiformat.dir/asciiformat.o >cd /builddir/build/BUILD/openbabel-2.3.2/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dasciiformat_EXPORTS -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -o CMakeFiles/asciiformat.dir/asciiformat.o -c /builddir/build/BUILD/openbabel-2.3.2/src/formats/asciiformat.cpp >Linking CXX shared module ../../lib/alchemyformat.so >cd /builddir/build/BUILD/openbabel-2.3.2/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/alchemyformat.dir/link.txt --verbose=1 >/usr/bin/c++ -fPIC -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -Wl,-soname,alchemyformat.so -o ../../lib/alchemyformat.so CMakeFiles/alchemyformat.dir/alchemyformat.o -lm -ldl -lz -lcairo -linchi -lm ../../lib/libopenbabel.so.4.0.2 -lm -ldl -lz >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 39%] Built target alchemyformat >make -f src/formats/CMakeFiles/balstformat.dir/build.make src/formats/CMakeFiles/balstformat.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/balstformat.dir/DependInfo.cmake --color= >Dependee "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/balstformat.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/balstformat.dir/depend.internal". >Dependee "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/balstformat.dir/depend.internal". >Scanning dependencies of target balstformat >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f src/formats/CMakeFiles/balstformat.dir/build.make src/formats/CMakeFiles/balstformat.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles 5 >[ 40%] Building CXX object src/formats/CMakeFiles/balstformat.dir/balstformat.o >cd /builddir/build/BUILD/openbabel-2.3.2/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dbalstformat_EXPORTS -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -o CMakeFiles/balstformat.dir/balstformat.o -c /builddir/build/BUILD/openbabel-2.3.2/src/formats/balstformat.cpp >Linking CXX shared module ../../lib/amberformat.so >cd /builddir/build/BUILD/openbabel-2.3.2/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/amberformat.dir/link.txt --verbose=1 >/usr/bin/c++ -fPIC -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -Wl,-soname,amberformat.so -o ../../lib/amberformat.so CMakeFiles/amberformat.dir/amberformat.o -lm -ldl -lz -lcairo -linchi -lm ../../lib/libopenbabel.so.4.0.2 -lm -ldl -lz >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 40%] Built target amberformat >make -f src/formats/CMakeFiles/bgfformat.dir/build.make src/formats/CMakeFiles/bgfformat.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/bgfformat.dir/DependInfo.cmake --color= >Dependee "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/bgfformat.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/bgfformat.dir/depend.internal". >Dependee "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/bgfformat.dir/depend.internal". >Scanning dependencies of target bgfformat >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f src/formats/CMakeFiles/bgfformat.dir/build.make src/formats/CMakeFiles/bgfformat.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 40%] Building CXX object src/formats/CMakeFiles/bgfformat.dir/bgfformat.o >cd /builddir/build/BUILD/openbabel-2.3.2/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dbgfformat_EXPORTS -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -o CMakeFiles/bgfformat.dir/bgfformat.o -c /builddir/build/BUILD/openbabel-2.3.2/src/formats/bgfformat.cpp >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 40%] Building CXX object src/formats/CMakeFiles/asciiformat.dir/__/depict/asciipainter.o >cd /builddir/build/BUILD/openbabel-2.3.2/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dasciiformat_EXPORTS -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -o CMakeFiles/asciiformat.dir/__/depict/asciipainter.o -c /builddir/build/BUILD/openbabel-2.3.2/src/depict/asciipainter.cpp >/builddir/build/BUILD/openbabel-2.3.2/src/depict/asciipainter.cpp: In member function 'virtual void OpenBabel::ASCIIPainter::DrawText(double, double, const string&)': >/builddir/build/BUILD/openbabel-2.3.2/src/depict/asciipainter.cpp:104:20: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] > for (int i=0; i<text.size(); ++i) { > ^ >Linking CXX shared module ../../lib/asciiformat.so >cd /builddir/build/BUILD/openbabel-2.3.2/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/asciiformat.dir/link.txt --verbose=1 >/usr/bin/c++ -fPIC -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -Wl,-soname,asciiformat.so -o ../../lib/asciiformat.so CMakeFiles/asciiformat.dir/asciiformat.o CMakeFiles/asciiformat.dir/__/depict/asciipainter.o -lm -ldl -lz -lcairo -linchi -lm ../../lib/libopenbabel.so.4.0.2 -lm -ldl -lz >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles 4 >[ 40%] Built target asciiformat >make -f src/formats/CMakeFiles/boxformat.dir/build.make src/formats/CMakeFiles/boxformat.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/boxformat.dir/DependInfo.cmake --color= >Dependee "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/boxformat.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/boxformat.dir/depend.internal". >Dependee "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/boxformat.dir/depend.internal". >Scanning dependencies of target boxformat >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f src/formats/CMakeFiles/boxformat.dir/build.make src/formats/CMakeFiles/boxformat.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles 7 >[ 41%] Building CXX object src/formats/CMakeFiles/boxformat.dir/boxformat.o >cd /builddir/build/BUILD/openbabel-2.3.2/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dboxformat_EXPORTS -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -o CMakeFiles/boxformat.dir/boxformat.o -c /builddir/build/BUILD/openbabel-2.3.2/src/formats/boxformat.cpp >Linking CXX shared module ../../lib/balstformat.so >cd /builddir/build/BUILD/openbabel-2.3.2/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/balstformat.dir/link.txt --verbose=1 >/usr/bin/c++ -fPIC -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -Wl,-soname,balstformat.so -o ../../lib/balstformat.so CMakeFiles/balstformat.dir/balstformat.o -lm -ldl -lz -lcairo -linchi -lm ../../lib/libopenbabel.so.4.0.2 -lm -ldl -lz >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles 5 >[ 41%] Built target balstformat >make -f src/formats/CMakeFiles/cacaoformat.dir/build.make src/formats/CMakeFiles/cacaoformat.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/cacaoformat.dir/DependInfo.cmake --color= >Dependee "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/cacaoformat.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/cacaoformat.dir/depend.internal". >Dependee "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/cacaoformat.dir/depend.internal". >Scanning dependencies of target cacaoformat >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f src/formats/CMakeFiles/cacaoformat.dir/build.make src/formats/CMakeFiles/cacaoformat.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 41%] Building CXX object src/formats/CMakeFiles/cacaoformat.dir/cacaoformat.o >cd /builddir/build/BUILD/openbabel-2.3.2/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dcacaoformat_EXPORTS -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -o CMakeFiles/cacaoformat.dir/cacaoformat.o -c /builddir/build/BUILD/openbabel-2.3.2/src/formats/cacaoformat.cpp >Linking CXX shared module ../../lib/adfformat.so >cd /builddir/build/BUILD/openbabel-2.3.2/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/adfformat.dir/link.txt --verbose=1 >/usr/bin/c++ -fPIC -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -Wl,-soname,adfformat.so -o ../../lib/adfformat.so CMakeFiles/adfformat.dir/adfformat.o -lm -ldl -lz -lcairo -linchi -lm ../../lib/libopenbabel.so.4.0.2 -lm -ldl -lz >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles 3 >[ 41%] Built target adfformat >make -f src/formats/CMakeFiles/cacheformat.dir/build.make src/formats/CMakeFiles/cacheformat.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/cacheformat.dir/DependInfo.cmake --color= >Dependee "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/cacheformat.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/cacheformat.dir/depend.internal". >Dependee "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/cacheformat.dir/depend.internal". >Scanning dependencies of target cacheformat >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f src/formats/CMakeFiles/cacheformat.dir/build.make src/formats/CMakeFiles/cacheformat.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 41%] Building CXX object src/formats/CMakeFiles/cacheformat.dir/cacheformat.o >cd /builddir/build/BUILD/openbabel-2.3.2/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dcacheformat_EXPORTS -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -o CMakeFiles/cacheformat.dir/cacheformat.o -c /builddir/build/BUILD/openbabel-2.3.2/src/formats/cacheformat.cpp >Linking CXX shared module ../../lib/bgfformat.so >cd /builddir/build/BUILD/openbabel-2.3.2/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/bgfformat.dir/link.txt --verbose=1 >/usr/bin/c++ -fPIC -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -Wl,-soname,bgfformat.so -o ../../lib/bgfformat.so CMakeFiles/bgfformat.dir/bgfformat.o -lm -ldl -lz -lcairo -linchi -lm ../../lib/libopenbabel.so.4.0.2 -lm -ldl -lz >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 41%] Built target bgfformat >make -f src/formats/CMakeFiles/carformat.dir/build.make src/formats/CMakeFiles/carformat.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/carformat.dir/DependInfo.cmake --color= >Dependee "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/carformat.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/carformat.dir/depend.internal". >Dependee "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/carformat.dir/depend.internal". >Scanning dependencies of target carformat >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f src/formats/CMakeFiles/carformat.dir/build.make src/formats/CMakeFiles/carformat.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles 8 >[ 42%] Building CXX object src/formats/CMakeFiles/carformat.dir/carformat.o >cd /builddir/build/BUILD/openbabel-2.3.2/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dcarformat_EXPORTS -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -o CMakeFiles/carformat.dir/carformat.o -c /builddir/build/BUILD/openbabel-2.3.2/src/formats/carformat.cpp >Linking CXX shared module ../../lib/boxformat.so >cd /builddir/build/BUILD/openbabel-2.3.2/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/boxformat.dir/link.txt --verbose=1 >/usr/bin/c++ -fPIC -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -Wl,-soname,boxformat.so -o ../../lib/boxformat.so CMakeFiles/boxformat.dir/boxformat.o -lm -ldl -lz -lcairo -linchi -lm ../../lib/libopenbabel.so.4.0.2 -lm -ldl -lz >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles 7 >[ 42%] Built target boxformat >make -f src/formats/CMakeFiles/castepformat.dir/build.make src/formats/CMakeFiles/castepformat.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/castepformat.dir/DependInfo.cmake --color= >Dependee "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/castepformat.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/castepformat.dir/depend.internal". >Dependee "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/castepformat.dir/depend.internal". >Scanning dependencies of target castepformat >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f src/formats/CMakeFiles/castepformat.dir/build.make src/formats/CMakeFiles/castepformat.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 42%] Building CXX object src/formats/CMakeFiles/castepformat.dir/castepformat.o >cd /builddir/build/BUILD/openbabel-2.3.2/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dcastepformat_EXPORTS -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -o CMakeFiles/castepformat.dir/castepformat.o -c /builddir/build/BUILD/openbabel-2.3.2/src/formats/castepformat.cpp >Linking CXX shared module ../../lib/cacaoformat.so >cd /builddir/build/BUILD/openbabel-2.3.2/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/cacaoformat.dir/link.txt --verbose=1 >/usr/bin/c++ -fPIC -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -Wl,-soname,cacaoformat.so -o ../../lib/cacaoformat.so CMakeFiles/cacaoformat.dir/cacaoformat.o -lm -ldl -lz -lcairo -linchi -lm ../../lib/libopenbabel.so.4.0.2 -lm -ldl -lz >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 42%] Built target cacaoformat >make -f src/formats/CMakeFiles/cccformat.dir/build.make src/formats/CMakeFiles/cccformat.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/cccformat.dir/DependInfo.cmake --color= >Dependee "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/cccformat.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/cccformat.dir/depend.internal". >Dependee "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/cccformat.dir/depend.internal". >Scanning dependencies of target cccformat >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f src/formats/CMakeFiles/cccformat.dir/build.make src/formats/CMakeFiles/cccformat.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >Linking CXX shared module ../../lib/cacheformat.so >cd /builddir/build/BUILD/openbabel-2.3.2/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/cacheformat.dir/link.txt --verbose=1 >[ 42%] /usr/bin/c++ -fPIC -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -Wl,-soname,cacheformat.so -o ../../lib/cacheformat.so CMakeFiles/cacheformat.dir/cacheformat.o -lm -ldl -lz -lcairo -linchi -lm ../../lib/libopenbabel.so.4.0.2 -lm -ldl -lz >Building CXX object src/formats/CMakeFiles/cccformat.dir/cccformat.o >cd /builddir/build/BUILD/openbabel-2.3.2/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dcccformat_EXPORTS -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -o CMakeFiles/cccformat.dir/cccformat.o -c /builddir/build/BUILD/openbabel-2.3.2/src/formats/cccformat.cpp >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 42%] Built target cacheformat >make -f src/formats/CMakeFiles/cdxmlformat.dir/build.make src/formats/CMakeFiles/cdxmlformat.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/cdxmlformat.dir/DependInfo.cmake --color= >Dependee "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/cdxmlformat.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/cdxmlformat.dir/depend.internal". >Dependee "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/cdxmlformat.dir/depend.internal". >Scanning dependencies of target cdxmlformat >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f src/formats/CMakeFiles/cdxmlformat.dir/build.make src/formats/CMakeFiles/cdxmlformat.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles 9 >[ 43%] Building CXX object src/formats/CMakeFiles/cdxmlformat.dir/xml/cdxmlformat.o >cd /builddir/build/BUILD/openbabel-2.3.2/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dcdxmlformat_EXPORTS -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -o CMakeFiles/cdxmlformat.dir/xml/cdxmlformat.o -c /builddir/build/BUILD/openbabel-2.3.2/src/formats/xml/cdxmlformat.cpp >Linking CXX shared module ../../lib/carformat.so >cd /builddir/build/BUILD/openbabel-2.3.2/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/carformat.dir/link.txt --verbose=1 >/usr/bin/c++ -fPIC -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -Wl,-soname,carformat.so -o ../../lib/carformat.so CMakeFiles/carformat.dir/carformat.o -lm -ldl -lz -lcairo -linchi -lm ../../lib/libopenbabel.so.4.0.2 -lm -ldl -lz >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles 8 >[ 43%] Built target carformat >make -f src/formats/CMakeFiles/chem3dformat.dir/build.make src/formats/CMakeFiles/chem3dformat.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/chem3dformat.dir/DependInfo.cmake --color= >Dependee "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/chem3dformat.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/chem3dformat.dir/depend.internal". >Dependee "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/chem3dformat.dir/depend.internal". >Scanning dependencies of target chem3dformat >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f src/formats/CMakeFiles/chem3dformat.dir/build.make src/formats/CMakeFiles/chem3dformat.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles 10 >[ 44%] Building CXX object src/formats/CMakeFiles/chem3dformat.dir/chem3dformat.o >cd /builddir/build/BUILD/openbabel-2.3.2/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dchem3dformat_EXPORTS -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -o CMakeFiles/chem3dformat.dir/chem3dformat.o -c /builddir/build/BUILD/openbabel-2.3.2/src/formats/chem3dformat.cpp >Linking CXX shared module ../../lib/cccformat.so >cd /builddir/build/BUILD/openbabel-2.3.2/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/cccformat.dir/link.txt --verbose=1 >/usr/bin/c++ -fPIC -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -Wl,-soname,cccformat.so -o ../../lib/cccformat.so CMakeFiles/cccformat.dir/cccformat.o -lm -ldl -lz -lcairo -linchi -lm ../../lib/libopenbabel.so.4.0.2 -lm -ldl -lz >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 44%] Built target cccformat >make -f src/formats/CMakeFiles/chemdrawcdx.dir/build.make src/formats/CMakeFiles/chemdrawcdx.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/chemdrawcdx.dir/DependInfo.cmake --color= >Dependee "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/chemdrawcdx.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/chemdrawcdx.dir/depend.internal". >Dependee "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/chemdrawcdx.dir/depend.internal". >Scanning dependencies of target chemdrawcdx >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f src/formats/CMakeFiles/chemdrawcdx.dir/build.make src/formats/CMakeFiles/chemdrawcdx.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 44%] Building CXX object src/formats/CMakeFiles/chemdrawcdx.dir/chemdrawcdx.o >cd /builddir/build/BUILD/openbabel-2.3.2/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dchemdrawcdx_EXPORTS -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -o CMakeFiles/chemdrawcdx.dir/chemdrawcdx.o -c /builddir/build/BUILD/openbabel-2.3.2/src/formats/chemdrawcdx.cpp >Linking CXX shared module ../../lib/castepformat.so >cd /builddir/build/BUILD/openbabel-2.3.2/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/castepformat.dir/link.txt --verbose=1 >/usr/bin/c++ -fPIC -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -Wl,-soname,castepformat.so -o ../../lib/castepformat.so CMakeFiles/castepformat.dir/castepformat.o -lm -ldl -lz -lcairo -linchi -lm ../../lib/libopenbabel.so.4.0.2 -lm -ldl -lz >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 44%] Built target castepformat >make -f src/formats/CMakeFiles/chemdrawct.dir/build.make src/formats/CMakeFiles/chemdrawct.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/chemdrawct.dir/DependInfo.cmake --color= >Dependee "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/chemdrawct.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/chemdrawct.dir/depend.internal". >Dependee "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/chemdrawct.dir/depend.internal". >Scanning dependencies of target chemdrawct >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f src/formats/CMakeFiles/chemdrawct.dir/build.make src/formats/CMakeFiles/chemdrawct.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 44%] Building CXX object src/formats/CMakeFiles/chemdrawct.dir/chemdrawct.o >cd /builddir/build/BUILD/openbabel-2.3.2/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dchemdrawct_EXPORTS -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -o CMakeFiles/chemdrawct.dir/chemdrawct.o -c /builddir/build/BUILD/openbabel-2.3.2/src/formats/chemdrawct.cpp >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 44%] Building CXX object src/formats/CMakeFiles/cdxmlformat.dir/xml/xml.o >cd /builddir/build/BUILD/openbabel-2.3.2/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dcdxmlformat_EXPORTS -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -o CMakeFiles/cdxmlformat.dir/xml/xml.o -c /builddir/build/BUILD/openbabel-2.3.2/src/formats/xml/xml.cpp >Linking CXX shared module ../../lib/chem3dformat.so >cd /builddir/build/BUILD/openbabel-2.3.2/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/chem3dformat.dir/link.txt --verbose=1 >/usr/bin/c++ -fPIC -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -Wl,-soname,chem3dformat.so -o ../../lib/chem3dformat.so CMakeFiles/chem3dformat.dir/chem3dformat.o -lm -ldl -lz -lcairo -linchi -lm ../../lib/libopenbabel.so.4.0.2 -lm -ldl -lz >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles 10 >[ 44%] Built target chem3dformat >make -f src/formats/CMakeFiles/chemkinformat.dir/build.make src/formats/CMakeFiles/chemkinformat.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/chemkinformat.dir/DependInfo.cmake --color= >Dependee "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/chemkinformat.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/chemkinformat.dir/depend.internal". >Dependee "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/chemkinformat.dir/depend.internal". >Scanning dependencies of target chemkinformat >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f src/formats/CMakeFiles/chemkinformat.dir/build.make src/formats/CMakeFiles/chemkinformat.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles 11 >[ 45%] Building CXX object src/formats/CMakeFiles/chemkinformat.dir/chemkinformat.o >cd /builddir/build/BUILD/openbabel-2.3.2/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dchemkinformat_EXPORTS -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -o CMakeFiles/chemkinformat.dir/chemkinformat.o -c /builddir/build/BUILD/openbabel-2.3.2/src/formats/chemkinformat.cpp >/builddir/build/BUILD/openbabel-2.3.2/src/formats/chemkinformat.cpp: In member function 'bool OpenBabel::ChemKinFormat::ReadReactionQualifierLines(std::istream&, OpenBabel::OBReaction*)': >/builddir/build/BUILD/openbabel-2.3.2/src/formats/chemkinformat.cpp:635:20: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] > for(int i=0;i<toks.size()-1;++i)//also incremented in body to retrieve id,val pairs > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/formats/chemkinformat.cpp: In member function 'bool OpenBabel::ChemKinFormat::WriteReactionLine(OpenBabel::OBReaction*, OpenBabel::OBConversion*)': >/builddir/build/BUILD/openbabel-2.3.2/src/formats/chemkinformat.cpp:906:11: warning: enumeration value 'ARRHENIUS' not handled in switch [-Wswitch] > switch(pRD->ReactionType) > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/formats/chemkinformat.cpp:906:11: warning: enumeration value 'THREEBODY' not handled in switch [-Wswitch] >/builddir/build/BUILD/openbabel-2.3.2/src/formats/chemkinformat.cpp:985:11: warning: enumeration value 'ARRHENIUS' not handled in switch [-Wswitch] > switch(pRD->ReactionType) > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/formats/chemkinformat.cpp:985:11: warning: enumeration value 'SRI' not handled in switch [-Wswitch] >Linking CXX shared module ../../lib/chemdrawct.so >cd /builddir/build/BUILD/openbabel-2.3.2/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/chemdrawct.dir/link.txt --verbose=1 >/usr/bin/c++ -fPIC -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -Wl,-soname,chemdrawct.so -o ../../lib/chemdrawct.so CMakeFiles/chemdrawct.dir/chemdrawct.o -lm -ldl -lz -lcairo -linchi -lm ../../lib/libopenbabel.so.4.0.2 -lm -ldl -lz >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 45%] Built target chemdrawct >make -f src/formats/CMakeFiles/chemtoolformat.dir/build.make src/formats/CMakeFiles/chemtoolformat.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/chemtoolformat.dir/DependInfo.cmake --color= >Dependee "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/chemtoolformat.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/chemtoolformat.dir/depend.internal". >Dependee "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/chemtoolformat.dir/depend.internal". >Scanning dependencies of target chemtoolformat >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f src/formats/CMakeFiles/chemtoolformat.dir/build.make src/formats/CMakeFiles/chemtoolformat.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 45%] /builddir/build/BUILD/openbabel-2.3.2/src/formats/chemdrawcdx.cpp: In member function 'int OpenBabel::ChemDrawBinaryFormat::readBond(std::istream*, UINT32, OpenBabel::OBMol*, std::list<OpenBabel::ChemDrawBinaryFormat::cdBond>&)': >/builddir/build/BUILD/openbabel-2.3.2/src/formats/chemdrawcdx.cpp:931:23: warning: 'endID' may be used uninitialized in this function [-Wmaybe-uninitialized] > UINT32 id, bgnID, endID; > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/formats/chemdrawcdx.cpp:931:16: warning: 'bgnID' may be used uninitialized in this function [-Wmaybe-uninitialized] > UINT32 id, bgnID, endID; > ^ >Building CXX object src/formats/CMakeFiles/chemtoolformat.dir/chemtoolformat.o >cd /builddir/build/BUILD/openbabel-2.3.2/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dchemtoolformat_EXPORTS -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -o CMakeFiles/chemtoolformat.dir/chemtoolformat.o -c /builddir/build/BUILD/openbabel-2.3.2/src/formats/chemtoolformat.cpp >Linking CXX shared module ../../lib/cdxmlformat.so >cd /builddir/build/BUILD/openbabel-2.3.2/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/cdxmlformat.dir/link.txt --verbose=1 >/usr/bin/c++ -fPIC -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -Wl,-soname,cdxmlformat.so -o ../../lib/cdxmlformat.so CMakeFiles/cdxmlformat.dir/xml/cdxmlformat.o CMakeFiles/cdxmlformat.dir/xml/xml.o -lm -ldl -lz -lcairo -linchi -lm -lxml2 ../../lib/libopenbabel.so.4.0.2 -lm -ldl -lz >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles 9 >[ 45%] Built target cdxmlformat >make -f src/formats/CMakeFiles/cifformat.dir/build.make src/formats/CMakeFiles/cifformat.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/cifformat.dir/DependInfo.cmake --color= >Dependee "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/cifformat.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/cifformat.dir/depend.internal". >Dependee "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/cifformat.dir/depend.internal". >Scanning dependencies of target cifformat >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f src/formats/CMakeFiles/cifformat.dir/build.make src/formats/CMakeFiles/cifformat.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 45%] Building CXX object src/formats/CMakeFiles/cifformat.dir/cifformat.o >cd /builddir/build/BUILD/openbabel-2.3.2/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dcifformat_EXPORTS -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -o CMakeFiles/cifformat.dir/cifformat.o -c /builddir/build/BUILD/openbabel-2.3.2/src/formats/cifformat.cpp >/builddir/build/BUILD/openbabel-2.3.2/src/formats/cifformat.cpp: In member function 'void OpenBabel::CIFData::CalcMatrices(bool)': >/builddir/build/BUILD/openbabel-2.3.2/src/formats/cifformat.cpp:833:11: warning: variable 'aa' set but not used [-Wunused-but-set-variable] > float aa,bb,cc,alphaa,betaa,gammaa;//reciprocal space parameters > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/formats/cifformat.cpp:833:14: warning: variable 'bb' set but not used [-Wunused-but-set-variable] > float aa,bb,cc,alphaa,betaa,gammaa;//reciprocal space parameters > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/formats/cifformat.cpp:833:27: warning: variable 'betaa' set but not used [-Wunused-but-set-variable] > float aa,bb,cc,alphaa,betaa,gammaa;//reciprocal space parameters > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/formats/cifformat.cpp:833:33: warning: variable 'gammaa' set but not used [-Wunused-but-set-variable] > float aa,bb,cc,alphaa,betaa,gammaa;//reciprocal space parameters > ^ >Linking CXX shared module ../../lib/chemtoolformat.so >cd /builddir/build/BUILD/openbabel-2.3.2/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/chemtoolformat.dir/link.txt --verbose=1 >/usr/bin/c++ -fPIC -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -Wl,-soname,chemtoolformat.so -o ../../lib/chemtoolformat.so CMakeFiles/chemtoolformat.dir/chemtoolformat.o -lm -ldl -lz -lcairo -linchi -lm ../../lib/libopenbabel.so.4.0.2 -lm -ldl -lz >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 45%] Built target chemtoolformat >make -f src/formats/CMakeFiles/cmlformat.dir/build.make src/formats/CMakeFiles/cmlformat.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/cmlformat.dir/DependInfo.cmake --color= >Dependee "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/cmlformat.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/cmlformat.dir/depend.internal". >Dependee "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/cmlformat.dir/depend.internal". >Scanning dependencies of target cmlformat >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f src/formats/CMakeFiles/cmlformat.dir/build.make src/formats/CMakeFiles/cmlformat.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles 12 >[ 46%] Building CXX object src/formats/CMakeFiles/cmlformat.dir/xml/cmlformat.o >cd /builddir/build/BUILD/openbabel-2.3.2/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dcmlformat_EXPORTS -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -o CMakeFiles/cmlformat.dir/xml/cmlformat.o -c /builddir/build/BUILD/openbabel-2.3.2/src/formats/xml/cmlformat.cpp >Linking CXX shared module ../../lib/chemdrawcdx.so >cd /builddir/build/BUILD/openbabel-2.3.2/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/chemdrawcdx.dir/link.txt --verbose=1 >/usr/bin/c++ -fPIC -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -Wl,-soname,chemdrawcdx.so -o ../../lib/chemdrawcdx.so CMakeFiles/chemdrawcdx.dir/chemdrawcdx.o -lm -ldl -lz -lcairo -linchi -lm ../../lib/libopenbabel.so.4.0.2 -lm -ldl -lz >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 46%] Built target chemdrawcdx >make -f src/formats/CMakeFiles/cmlreactformat.dir/build.make src/formats/CMakeFiles/cmlreactformat.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/cmlreactformat.dir/DependInfo.cmake --color= >Dependee "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/cmlreactformat.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/cmlreactformat.dir/depend.internal". >Dependee "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/cmlreactformat.dir/depend.internal". >Scanning dependencies of target cmlreactformat >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f src/formats/CMakeFiles/cmlreactformat.dir/build.make src/formats/CMakeFiles/cmlreactformat.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 46%] Building CXX object src/formats/CMakeFiles/cmlreactformat.dir/xml/cmlreactformat.o >cd /builddir/build/BUILD/openbabel-2.3.2/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dcmlreactformat_EXPORTS -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -o CMakeFiles/cmlreactformat.dir/xml/cmlreactformat.o -c /builddir/build/BUILD/openbabel-2.3.2/src/formats/xml/cmlreactformat.cpp >/builddir/build/BUILD/openbabel-2.3.2/src/formats/xml/cmlformat.cpp: In member function 'bool OpenBabel::CMLFormat::DoHCounts()': >/builddir/build/BUILD/openbabel-2.3.2/src/formats/xml/cmlformat.cpp:929:27: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] > for(unsigned i=0;i<iter->second - explH;++i) > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/formats/xml/cmlformat.cpp: In member function 'void OpenBabel::CMLFormat::WriteMetadataList(OpenBabel::OBMol&)': >/builddir/build/BUILD/openbabel-2.3.2/src/formats/xml/cmlformat.cpp:1232:26: warning: unused variable 'C_TITLE' [-Wunused-variable] > static const xmlChar C_TITLE[] = "title"; > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/formats/xml/cmlformat.cpp: In member function 'std::string OpenBabel::CMLFormat::getTimestr()': >/builddir/build/BUILD/openbabel-2.3.2/src/formats/xml/cmlformat.cpp:1282:12: warning: variable 'time_res' set but not used [-Wunused-but-set-variable] > size_t time_res; /* Result of strftime */ > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/formats/xml/cmlformat.cpp: In member function 'virtual bool OpenBabel::CMLFormat::WriteMolecule(OpenBabel::OBBase*, OpenBabel::OBConversion*)': >/builddir/build/BUILD/openbabel-2.3.2/src/formats/xml/cmlformat.cpp:1329:26: warning: unused variable 'C_DESCRIPTION' [-Wunused-variable] > static const xmlChar C_DESCRIPTION[] = "description"; > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/formats/xml/cmlformat.cpp: In member function 'bool OpenBabel::CMLFormat::WriteVibrationData(OpenBabel::OBMol&)': >/builddir/build/BUILD/openbabel-2.3.2/src/formats/xml/cmlformat.cpp:2281:26: warning: unused variable 'C_SCALAR' [-Wunused-variable] > static const xmlChar C_SCALAR[] = "scalar"; > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/formats/xml/cmlreactformat.cpp: In member function 'virtual bool OpenBabel::CMLReactFormat::WriteMolecule(OpenBabel::OBBase*, OpenBabel::OBConversion*)': >/builddir/build/BUILD/openbabel-2.3.2/src/formats/xml/cmlreactformat.cpp:516:12: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] > for(i=0;i<pReact->NumReactants();i++) > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/formats/xml/cmlreactformat.cpp:538:12: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] > for(i=0;i<pReact->NumProducts();i++) > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/formats/xml/cmlreactformat.cpp: In member function 'bool OpenBabel::CMLReactFormat::WriteRateData(OpenBabel::OBReaction*, xmlChar*)': >/builddir/build/BUILD/openbabel-2.3.2/src/formats/xml/cmlreactformat.cpp:702:9: warning: enumeration value 'ARRHENIUS' not handled in switch [-Wswitch] > switch(pRD->ReactionType) > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/formats/xml/cmlreactformat.cpp:730:9: warning: enumeration value 'ARRHENIUS' not handled in switch [-Wswitch] > switch(pRD->ReactionType) > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/formats/xml/cmlreactformat.cpp:730:9: warning: enumeration value 'SRI' not handled in switch [-Wswitch] >/builddir/build/BUILD/openbabel-2.3.2/src/formats/xml/cmlreactformat.cpp: In member function 'void OpenBabel::CMLReactFormat::WriteMetadataList(OpenBabel::OBReaction&)': >/builddir/build/BUILD/openbabel-2.3.2/src/formats/xml/cmlreactformat.cpp:769:26: warning: unused variable 'C_TITLE' [-Wunused-variable] > static const xmlChar C_TITLE[] = "title"; > ^ >Linking CXX shared module ../../lib/chemkinformat.so >cd /builddir/build/BUILD/openbabel-2.3.2/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/chemkinformat.dir/link.txt --verbose=1 >/usr/bin/c++ -fPIC -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -Wl,-soname,chemkinformat.so -o ../../lib/chemkinformat.so CMakeFiles/chemkinformat.dir/chemkinformat.o -lm -ldl -lz -lcairo -linchi -lm ../../lib/libopenbabel.so.4.0.2 -lm -ldl -lz >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles 11 >[ 46%] Built target chemkinformat >make -f src/formats/CMakeFiles/copyformat.dir/build.make src/formats/CMakeFiles/copyformat.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/copyformat.dir/DependInfo.cmake --color= >Dependee "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/copyformat.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/copyformat.dir/depend.internal". >Dependee "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/copyformat.dir/depend.internal". >Scanning dependencies of target copyformat >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f src/formats/CMakeFiles/copyformat.dir/build.make src/formats/CMakeFiles/copyformat.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 46%] Building CXX object src/formats/CMakeFiles/copyformat.dir/copyformat.o >cd /builddir/build/BUILD/openbabel-2.3.2/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dcopyformat_EXPORTS -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -o CMakeFiles/copyformat.dir/copyformat.o -c /builddir/build/BUILD/openbabel-2.3.2/src/formats/copyformat.cpp >Linking CXX shared module ../../lib/copyformat.so >cd /builddir/build/BUILD/openbabel-2.3.2/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/copyformat.dir/link.txt --verbose=1 >/usr/bin/c++ -fPIC -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -Wl,-soname,copyformat.so -o ../../lib/copyformat.so CMakeFiles/copyformat.dir/copyformat.o -lm -ldl -lz -lcairo -linchi -lm ../../lib/libopenbabel.so.4.0.2 -lm -ldl -lz >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 46%] Built target copyformat >make -f src/formats/CMakeFiles/crkformat.dir/build.make src/formats/CMakeFiles/crkformat.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/crkformat.dir/DependInfo.cmake --color= >Dependee "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/crkformat.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/crkformat.dir/depend.internal". >Dependee "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/crkformat.dir/depend.internal". >Scanning dependencies of target crkformat >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f src/formats/CMakeFiles/crkformat.dir/build.make src/formats/CMakeFiles/crkformat.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 46%] Building CXX object src/formats/CMakeFiles/crkformat.dir/crkformat.o >cd /builddir/build/BUILD/openbabel-2.3.2/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dcrkformat_EXPORTS -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -o CMakeFiles/crkformat.dir/crkformat.o -c /builddir/build/BUILD/openbabel-2.3.2/src/formats/crkformat.cpp >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles 13 >[ 47%] Building CXX object src/formats/CMakeFiles/cmlreactformat.dir/xml/xml.o >cd /builddir/build/BUILD/openbabel-2.3.2/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dcmlreactformat_EXPORTS -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -o CMakeFiles/cmlreactformat.dir/xml/xml.o -c /builddir/build/BUILD/openbabel-2.3.2/src/formats/xml/xml.cpp >/builddir/build/BUILD/openbabel-2.3.2/src/formats/crkformat.cpp: In static member function 'static bool OpenBabel::CRK2DFormat::ReadCRK(std::istream&, OpenBabel::OBMol&, const char*)': >/builddir/build/BUILD/openbabel-2.3.2/src/formats/crkformat.cpp:304:48: warning: 'bondStyle' may be used uninitialized in this function [-Wmaybe-uninitialized] > stbondStyle[numBonds]=bondStyle; > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/formats/crkformat.cpp:302:42: warning: 'bondTo' may be used uninitialized in this function [-Wmaybe-uninitialized] > stbondTo[numBonds]=bondTo; > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/formats/crkformat.cpp:301:46: warning: 'bondFrom' may be used uninitialized in this function [-Wmaybe-uninitialized] > stbondFrom[numBonds]=bondFrom; > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/formats/crkformat.cpp:287:52: warning: 'atomCharge' may be used uninitialized in this function [-Wmaybe-uninitialized] > atm.SetFormalCharge((int)atomCharge); > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/formats/crkformat.cpp:286:49: warning: 'atomZ' may be used uninitialized in this function [-Wmaybe-uninitialized] > atm.SetVector(atomX,atomY,atomZ); > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/formats/crkformat.cpp:286:49: warning: 'atomY' may be used uninitialized in this function [-Wmaybe-uninitialized] >/builddir/build/BUILD/openbabel-2.3.2/src/formats/crkformat.cpp:286:49: warning: 'atomX' may be used uninitialized in this function [-Wmaybe-uninitialized] >In file included from /builddir/build/BUILD/openbabel-2.3.2/include/openbabel/mol.h:42:0, > from /builddir/build/BUILD/openbabel-2.3.2/include/openbabel/obmolecformat.h:34, > from /builddir/build/BUILD/openbabel-2.3.2/src/formats/crkformat.cpp:16: >/builddir/build/BUILD/openbabel-2.3.2/include/openbabel/atom.h:144:67: warning: 'atomNumber' may be used uninitialized in this function [-Wmaybe-uninitialized] > void SetAtomicNum(int atomicnum) { _ele = (char)atomicnum; } > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/formats/crkformat.cpp:241:16: note: 'atomNumber' was declared here > int atomID,atomNumber; > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/formats/crkformat.cpp:283:44: warning: 'atomID' may be used uninitialized in this function [-Wmaybe-uninitialized] > statomID[numAtoms++]=atomID; > ^ >Linking CXX shared module ../../lib/crkformat.so >cd /builddir/build/BUILD/openbabel-2.3.2/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/crkformat.dir/link.txt --verbose=1 >/usr/bin/c++ -fPIC -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -Wl,-soname,crkformat.so -o ../../lib/crkformat.so CMakeFiles/crkformat.dir/crkformat.o -lm -ldl -lz -lcairo -linchi -lm ../../lib/libopenbabel.so.4.0.2 -lm -ldl -lz >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 47%] Built target crkformat >make -f src/formats/CMakeFiles/crystal09format.dir/build.make src/formats/CMakeFiles/crystal09format.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/crystal09format.dir/DependInfo.cmake --color= >Dependee "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/crystal09format.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/crystal09format.dir/depend.internal". >Dependee "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/crystal09format.dir/depend.internal". >Scanning dependencies of target crystal09format >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f src/formats/CMakeFiles/crystal09format.dir/build.make src/formats/CMakeFiles/crystal09format.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles 14 >[ 48%] Building CXX object src/formats/CMakeFiles/crystal09format.dir/crystal09format.o >cd /builddir/build/BUILD/openbabel-2.3.2/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dcrystal09format_EXPORTS -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -o CMakeFiles/crystal09format.dir/crystal09format.o -c /builddir/build/BUILD/openbabel-2.3.2/src/formats/crystal09format.cpp >Linking CXX shared module ../../lib/cifformat.so >cd /builddir/build/BUILD/openbabel-2.3.2/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/cifformat.dir/link.txt --verbose=1 >/usr/bin/c++ -fPIC -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -Wl,-soname,cifformat.so -o ../../lib/cifformat.so CMakeFiles/cifformat.dir/cifformat.o -lm -ldl -lz -lcairo -linchi -lm ../../lib/libopenbabel.so.4.0.2 -lm -ldl -lz >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 48%] Built target cifformat >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 48%] Building CXX object src/formats/CMakeFiles/cmlformat.dir/xml/xml.o >cd /builddir/build/BUILD/openbabel-2.3.2/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dcmlformat_EXPORTS -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -o CMakeFiles/cmlformat.dir/xml/xml.o -c /builddir/build/BUILD/openbabel-2.3.2/src/formats/xml/xml.cpp >Linking CXX shared module ../../lib/cmlreactformat.so >cd /builddir/build/BUILD/openbabel-2.3.2/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/cmlreactformat.dir/link.txt --verbose=1 >/usr/bin/c++ -fPIC -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -Wl,-soname,cmlreactformat.so -o ../../lib/cmlreactformat.so CMakeFiles/cmlreactformat.dir/xml/cmlreactformat.o CMakeFiles/cmlreactformat.dir/xml/xml.o -lm -ldl -lz -lcairo -linchi -lm -lxml2 ../../lib/libopenbabel.so.4.0.2 -lm -ldl -lz >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles 13 >[ 48%] Built target cmlreactformat >make -f src/formats/CMakeFiles/cssrformat.dir/build.make src/formats/CMakeFiles/cssrformat.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/cssrformat.dir/DependInfo.cmake --color= >Dependee "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/cssrformat.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/cssrformat.dir/depend.internal". >Dependee "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/cssrformat.dir/depend.internal". >Scanning dependencies of target cssrformat >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f src/formats/CMakeFiles/cssrformat.dir/build.make src/formats/CMakeFiles/cssrformat.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 48%] Building CXX object src/formats/CMakeFiles/cssrformat.dir/cssrformat.o >cd /builddir/build/BUILD/openbabel-2.3.2/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dcssrformat_EXPORTS -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -o CMakeFiles/cssrformat.dir/cssrformat.o -c /builddir/build/BUILD/openbabel-2.3.2/src/formats/cssrformat.cpp >make -f src/formats/CMakeFiles/dlpolyformat.dir/build.make src/formats/CMakeFiles/dlpolyformat.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/dlpolyformat.dir/DependInfo.cmake --color= >Dependee "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/dlpolyformat.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/dlpolyformat.dir/depend.internal". >Dependee "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/dlpolyformat.dir/depend.internal". >Scanning dependencies of target dlpolyformat >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f src/formats/CMakeFiles/dlpolyformat.dir/build.make src/formats/CMakeFiles/dlpolyformat.dir/build >Linking CXX shared module ../../lib/cmlformat.so >cd /builddir/build/BUILD/openbabel-2.3.2/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/cmlformat.dir/link.txt --verbose=1 >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >/usr/bin/c++ -fPIC -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -Wl,-soname,cmlformat.so -o ../../lib/cmlformat.so CMakeFiles/cmlformat.dir/xml/cmlformat.o CMakeFiles/cmlformat.dir/xml/xml.o -lm -ldl -lz -lcairo -linchi -lm -lxml2 ../../lib/libopenbabel.so.4.0.2 -lm -ldl -lz >[ 48%] Building CXX object src/formats/CMakeFiles/dlpolyformat.dir/dlpolyformat.o >cd /builddir/build/BUILD/openbabel-2.3.2/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Ddlpolyformat_EXPORTS -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -o CMakeFiles/dlpolyformat.dir/dlpolyformat.o -c /builddir/build/BUILD/openbabel-2.3.2/src/formats/dlpolyformat.cpp >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles 12 >[ 48%] Built target cmlformat >make -f src/formats/CMakeFiles/dmolformat.dir/build.make src/formats/CMakeFiles/dmolformat.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/dmolformat.dir/DependInfo.cmake --color= >Dependee "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/dmolformat.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/dmolformat.dir/depend.internal". >Dependee "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/dmolformat.dir/depend.internal". >Scanning dependencies of target dmolformat >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f src/formats/CMakeFiles/dmolformat.dir/build.make src/formats/CMakeFiles/dmolformat.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles 15 >[ 49%] Building CXX object src/formats/CMakeFiles/dmolformat.dir/dmolformat.o >cd /builddir/build/BUILD/openbabel-2.3.2/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Ddmolformat_EXPORTS -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -o CMakeFiles/dmolformat.dir/dmolformat.o -c /builddir/build/BUILD/openbabel-2.3.2/src/formats/dmolformat.cpp >Linking CXX shared module ../../lib/cssrformat.so >cd /builddir/build/BUILD/openbabel-2.3.2/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/cssrformat.dir/link.txt --verbose=1 >/usr/bin/c++ -fPIC -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -Wl,-soname,cssrformat.so -o ../../lib/cssrformat.so CMakeFiles/cssrformat.dir/cssrformat.o -lm -ldl -lz -lcairo -linchi -lm ../../lib/libopenbabel.so.4.0.2 -lm -ldl -lz >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 49%] Built target cssrformat >make -f src/formats/CMakeFiles/fastaformat.dir/build.make src/formats/CMakeFiles/fastaformat.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/fastaformat.dir/DependInfo.cmake --color= >Dependee "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/fastaformat.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/fastaformat.dir/depend.internal". >Dependee "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/fastaformat.dir/depend.internal". >Scanning dependencies of target fastaformat >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f src/formats/CMakeFiles/fastaformat.dir/build.make src/formats/CMakeFiles/fastaformat.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 49%] Building CXX object src/formats/CMakeFiles/fastaformat.dir/fastaformat.o >cd /builddir/build/BUILD/openbabel-2.3.2/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dfastaformat_EXPORTS -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -o CMakeFiles/fastaformat.dir/fastaformat.o -c /builddir/build/BUILD/openbabel-2.3.2/src/formats/fastaformat.cpp >/builddir/build/BUILD/openbabel-2.3.2/src/formats/dlpolyformat.cpp: In member function 'bool OpenBabel::DlpolyInputReader::ParseUnitCell(std::istream&, OpenBabel::OBMol&)': >/builddir/build/BUILD/openbabel-2.3.2/src/formats/dlpolyformat.cpp:147:10: warning: variable 'ok' set but not used [-Wunused-but-set-variable] > bool ok; > ^ >Linking CXX shared module ../../lib/crystal09format.so >cd /builddir/build/BUILD/openbabel-2.3.2/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/crystal09format.dir/link.txt --verbose=1 >/usr/bin/c++ -fPIC -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -Wl,-soname,crystal09format.so -o ../../lib/crystal09format.so CMakeFiles/crystal09format.dir/crystal09format.o -lm -ldl -lz -lcairo -linchi -lm ../../lib/libopenbabel.so.4.0.2 -lm -ldl -lz >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles 14 >[ 49%] Built target crystal09format >make -f src/formats/CMakeFiles/fastsearchformat.dir/build.make src/formats/CMakeFiles/fastsearchformat.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/fastsearchformat.dir/DependInfo.cmake --color= >Dependee "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/fastsearchformat.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/fastsearchformat.dir/depend.internal". >Dependee "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/fastsearchformat.dir/depend.internal". >Scanning dependencies of target fastsearchformat >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f src/formats/CMakeFiles/fastsearchformat.dir/build.make src/formats/CMakeFiles/fastsearchformat.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 49%] Building CXX object src/formats/CMakeFiles/fastsearchformat.dir/fastsearchformat.o >cd /builddir/build/BUILD/openbabel-2.3.2/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dfastsearchformat_EXPORTS -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -o CMakeFiles/fastsearchformat.dir/fastsearchformat.o -c /builddir/build/BUILD/openbabel-2.3.2/src/formats/fastsearchformat.cpp >/builddir/build/BUILD/openbabel-2.3.2/src/formats/fastaformat.cpp: In function 'void OpenBabel::add_residue(OpenBabel::OBMol*, OpenBabel::OBResidue*, double, double, long unsigned int&, OpenBabel::ResidueRecord*, int, OpenBabel::OBAtom*&, bool, bool)': >/builddir/build/BUILD/openbabel-2.3.2/src/formats/fastaformat.cpp:387:33: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] > else if (atom_count > resBondFromOffset) > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/formats/fastsearchformat.cpp: In member function 'void OpenBabel::FastSearchFormat::AddPattern(std::vector<OpenBabel::OBMol>&, OpenBabel::OBMol, int)': >/builddir/build/BUILD/openbabel-2.3.2/src/formats/fastsearchformat.cpp:627:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] > if(idx>=patternMol.NumBonds()) > ^ >Linking CXX shared module ../../lib/dmolformat.so >cd /builddir/build/BUILD/openbabel-2.3.2/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/dmolformat.dir/link.txt --verbose=1 >/usr/bin/c++ -fPIC -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -Wl,-soname,dmolformat.so -o ../../lib/dmolformat.so CMakeFiles/dmolformat.dir/dmolformat.o -lm -ldl -lz -lcairo -linchi -lm ../../lib/libopenbabel.so.4.0.2 -lm -ldl -lz >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles 15 >[ 49%] Built target dmolformat >make -f src/formats/CMakeFiles/fchkformat.dir/build.make src/formats/CMakeFiles/fchkformat.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/fchkformat.dir/DependInfo.cmake --color= >Dependee "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/fchkformat.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/fchkformat.dir/depend.internal". >Dependee "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/fchkformat.dir/depend.internal". >Scanning dependencies of target fchkformat >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f src/formats/CMakeFiles/fchkformat.dir/build.make src/formats/CMakeFiles/fchkformat.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles 16 >[ 50%] Building CXX object src/formats/CMakeFiles/fchkformat.dir/fchkformat.o >cd /builddir/build/BUILD/openbabel-2.3.2/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dfchkformat_EXPORTS -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -o CMakeFiles/fchkformat.dir/fchkformat.o -c /builddir/build/BUILD/openbabel-2.3.2/src/formats/fchkformat.cpp >Linking CXX shared module ../../lib/fastaformat.so >cd /builddir/build/BUILD/openbabel-2.3.2/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/fastaformat.dir/link.txt --verbose=1 >/usr/bin/c++ -fPIC -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -Wl,-soname,fastaformat.so -o ../../lib/fastaformat.so CMakeFiles/fastaformat.dir/fastaformat.o -lm -ldl -lz -lcairo -linchi -lm ../../lib/libopenbabel.so.4.0.2 -lm -ldl -lz >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 50%] Built target fastaformat >make -f src/formats/CMakeFiles/featformat.dir/build.make src/formats/CMakeFiles/featformat.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/featformat.dir/DependInfo.cmake --color= >Dependee "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/featformat.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/featformat.dir/depend.internal". >Dependee "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/featformat.dir/depend.internal". >Scanning dependencies of target featformat >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f src/formats/CMakeFiles/featformat.dir/build.make src/formats/CMakeFiles/featformat.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 50%] Building CXX object src/formats/CMakeFiles/featformat.dir/featformat.o >cd /builddir/build/BUILD/openbabel-2.3.2/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dfeatformat_EXPORTS -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -o CMakeFiles/featformat.dir/featformat.o -c /builddir/build/BUILD/openbabel-2.3.2/src/formats/featformat.cpp >Linking CXX shared module ../../lib/dlpolyformat.so >cd /builddir/build/BUILD/openbabel-2.3.2/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/dlpolyformat.dir/link.txt --verbose=1 >/usr/bin/c++ -fPIC -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -Wl,-soname,dlpolyformat.so -o ../../lib/dlpolyformat.so CMakeFiles/dlpolyformat.dir/dlpolyformat.o -lm -ldl -lz -lcairo -linchi -lm ../../lib/libopenbabel.so.4.0.2 -lm -ldl -lz >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 50%] Built target dlpolyformat >make -f src/formats/CMakeFiles/fhformat.dir/build.make src/formats/CMakeFiles/fhformat.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/fhformat.dir/DependInfo.cmake --color= >Dependee "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/fhformat.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/fhformat.dir/depend.internal". >Dependee "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/fhformat.dir/depend.internal". >Scanning dependencies of target fhformat >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f src/formats/CMakeFiles/fhformat.dir/build.make src/formats/CMakeFiles/fhformat.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 50%] Building CXX object src/formats/CMakeFiles/fhformat.dir/fhformat.o >cd /builddir/build/BUILD/openbabel-2.3.2/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dfhformat_EXPORTS -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -o CMakeFiles/fhformat.dir/fhformat.o -c /builddir/build/BUILD/openbabel-2.3.2/src/formats/fhformat.cpp >Linking CXX shared module ../../lib/featformat.so >cd /builddir/build/BUILD/openbabel-2.3.2/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/featformat.dir/link.txt --verbose=1 >/usr/bin/c++ -fPIC -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -Wl,-soname,featformat.so -o ../../lib/featformat.so CMakeFiles/featformat.dir/featformat.o -lm -ldl -lz -lcairo -linchi -lm ../../lib/libopenbabel.so.4.0.2 -lm -ldl -lz >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 50%] Built target featformat >make -f src/formats/CMakeFiles/fhiaimsformat.dir/build.make src/formats/CMakeFiles/fhiaimsformat.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/fhiaimsformat.dir/DependInfo.cmake --color= >Dependee "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/fhiaimsformat.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/fhiaimsformat.dir/depend.internal". >Dependee "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/fhiaimsformat.dir/depend.internal". >Scanning dependencies of target fhiaimsformat >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f src/formats/CMakeFiles/fhiaimsformat.dir/build.make src/formats/CMakeFiles/fhiaimsformat.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles 17 >[ 51%] Building CXX object src/formats/CMakeFiles/fhiaimsformat.dir/fhiaimsformat.o >cd /builddir/build/BUILD/openbabel-2.3.2/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dfhiaimsformat_EXPORTS -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -o CMakeFiles/fhiaimsformat.dir/fhiaimsformat.o -c /builddir/build/BUILD/openbabel-2.3.2/src/formats/fhiaimsformat.cpp >Linking CXX shared module ../../lib/fastsearchformat.so >cd /builddir/build/BUILD/openbabel-2.3.2/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/fastsearchformat.dir/link.txt --verbose=1 >/usr/bin/c++ -fPIC -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -Wl,-soname,fastsearchformat.so -o ../../lib/fastsearchformat.so CMakeFiles/fastsearchformat.dir/fastsearchformat.o -lm -ldl -lz -lcairo -linchi -lm ../../lib/libopenbabel.so.4.0.2 -lm -ldl -lz >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 51%] Built target fastsearchformat >make -f src/formats/CMakeFiles/fingerprintformat.dir/build.make src/formats/CMakeFiles/fingerprintformat.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/fingerprintformat.dir/DependInfo.cmake --color= >Dependee "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/fingerprintformat.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/fingerprintformat.dir/depend.internal". >Dependee "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/fingerprintformat.dir/depend.internal". >Scanning dependencies of target fingerprintformat >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f src/formats/CMakeFiles/fingerprintformat.dir/build.make src/formats/CMakeFiles/fingerprintformat.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 51%] Building CXX object src/formats/CMakeFiles/fingerprintformat.dir/fingerprintformat.o >cd /builddir/build/BUILD/openbabel-2.3.2/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dfingerprintformat_EXPORTS -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -o CMakeFiles/fingerprintformat.dir/fingerprintformat.o -c /builddir/build/BUILD/openbabel-2.3.2/src/formats/fingerprintformat.cpp >Linking CXX shared module ../../lib/fhformat.so >cd /builddir/build/BUILD/openbabel-2.3.2/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/fhformat.dir/link.txt --verbose=1 >/usr/bin/c++ -fPIC -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -Wl,-soname,fhformat.so -o ../../lib/fhformat.so CMakeFiles/fhformat.dir/fhformat.o -lm -ldl -lz -lcairo -linchi -lm ../../lib/libopenbabel.so.4.0.2 -lm -ldl -lz >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 51%] Built target fhformat >make -f src/formats/CMakeFiles/fpsformat.dir/build.make src/formats/CMakeFiles/fpsformat.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/fpsformat.dir/DependInfo.cmake --color= >Dependee "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/fpsformat.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/fpsformat.dir/depend.internal". >Dependee "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/fpsformat.dir/depend.internal". >Scanning dependencies of target fpsformat >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f src/formats/CMakeFiles/fpsformat.dir/build.make src/formats/CMakeFiles/fpsformat.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 51%] Building CXX object src/formats/CMakeFiles/fpsformat.dir/fpsformat.o >cd /builddir/build/BUILD/openbabel-2.3.2/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dfpsformat_EXPORTS -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -o CMakeFiles/fpsformat.dir/fpsformat.o -c /builddir/build/BUILD/openbabel-2.3.2/src/formats/fpsformat.cpp >Linking CXX shared module ../../lib/fchkformat.so >cd /builddir/build/BUILD/openbabel-2.3.2/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/fchkformat.dir/link.txt --verbose=1 >/usr/bin/c++ -fPIC -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -Wl,-soname,fchkformat.so -o ../../lib/fchkformat.so CMakeFiles/fchkformat.dir/fchkformat.o -lm -ldl -lz -lcairo -linchi -lm ../../lib/libopenbabel.so.4.0.2 -lm -ldl -lz >Linking CXX shared module ../../lib/fhiaimsformat.so >cd /builddir/build/BUILD/openbabel-2.3.2/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/fhiaimsformat.dir/link.txt --verbose=1 >/usr/bin/c++ -fPIC -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -Wl,-soname,fhiaimsformat.so -o ../../lib/fhiaimsformat.so CMakeFiles/fhiaimsformat.dir/fhiaimsformat.o -lm -ldl -lz -lcairo -linchi -lm ../../lib/libopenbabel.so.4.0.2 -lm -ldl -lz >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles 16 >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles 17 >[ 51%] [ 51%] Built target fchkformat >make -f src/formats/CMakeFiles/freefracformat.dir/build.make src/formats/CMakeFiles/freefracformat.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >Built target fhiaimsformat >make -f src/formats/CMakeFiles/gamessformat.dir/build.make src/formats/CMakeFiles/gamessformat.dir/depend >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/freefracformat.dir/DependInfo.cmake --color= >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/gamessformat.dir/DependInfo.cmake --color= >Dependee "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/freefracformat.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/freefracformat.dir/depend.internal". >Dependee "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/gamessformat.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/gamessformat.dir/depend.internal". >Dependee "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/gamessformat.dir/depend.internal". >Dependee "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/freefracformat.dir/depend.internal". >Scanning dependencies of target gamessformat >Scanning dependencies of target freefracformat >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f src/formats/CMakeFiles/gamessformat.dir/build.make src/formats/CMakeFiles/gamessformat.dir/build >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f src/formats/CMakeFiles/freefracformat.dir/build.make src/formats/CMakeFiles/freefracformat.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles 18 >[ 52%] [ 52%] Building CXX object src/formats/CMakeFiles/gamessformat.dir/gamessformat.o >Building CXX object src/formats/CMakeFiles/freefracformat.dir/freefracformat.o >cd /builddir/build/BUILD/openbabel-2.3.2/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dgamessformat_EXPORTS -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -o CMakeFiles/gamessformat.dir/gamessformat.o -c /builddir/build/BUILD/openbabel-2.3.2/src/formats/gamessformat.cpp >cd /builddir/build/BUILD/openbabel-2.3.2/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dfreefracformat_EXPORTS -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -o CMakeFiles/freefracformat.dir/freefracformat.o -c /builddir/build/BUILD/openbabel-2.3.2/src/formats/freefracformat.cpp >/builddir/build/BUILD/openbabel-2.3.2/src/formats/fpsformat.cpp: In member function 'virtual bool OpenBabel::FPSFormat::WriteMolecule(OpenBabel::OBBase*, OpenBabel::OBConversion*)': >/builddir/build/BUILD/openbabel-2.3.2/src/formats/fpsformat.cpp:146:21: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] > for(unsigned i=0;i<(_nbits+31)/32;++i) > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/formats/fpsformat.cpp: In member function 'std::string OpenBabel::FPSFormat::getTimeStr()': >/builddir/build/BUILD/openbabel-2.3.2/src/formats/fpsformat.cpp:169:10: warning: variable 'time_res' set but not used [-Wunused-but-set-variable] > size_t time_res; /* Result of strftime */ > ^ >Linking CXX shared module ../../lib/fingerprintformat.so >cd /builddir/build/BUILD/openbabel-2.3.2/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/fingerprintformat.dir/link.txt --verbose=1 >/usr/bin/c++ -fPIC -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -Wl,-soname,fingerprintformat.so -o ../../lib/fingerprintformat.so CMakeFiles/fingerprintformat.dir/fingerprintformat.o -lm -ldl -lz -lcairo -linchi -lm ../../lib/libopenbabel.so.4.0.2 -lm -ldl -lz >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 52%] Built target fingerprintformat >make -f src/formats/CMakeFiles/gamessukformat.dir/build.make src/formats/CMakeFiles/gamessukformat.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/gamessukformat.dir/DependInfo.cmake --color= >Dependee "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/gamessukformat.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/gamessukformat.dir/depend.internal". >Dependee "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/gamessukformat.dir/depend.internal". >Scanning dependencies of target gamessukformat >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f src/formats/CMakeFiles/gamessukformat.dir/build.make src/formats/CMakeFiles/gamessukformat.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 52%] Building CXX object src/formats/CMakeFiles/gamessukformat.dir/gamessukformat.o >cd /builddir/build/BUILD/openbabel-2.3.2/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dgamessukformat_EXPORTS -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -o CMakeFiles/gamessukformat.dir/gamessukformat.o -c /builddir/build/BUILD/openbabel-2.3.2/src/formats/gamessukformat.cpp >/builddir/build/BUILD/openbabel-2.3.2/src/formats/gamessformat.cpp: In member function 'virtual bool OpenBabel::GAMESSOutputFormat::ReadMolecule(OpenBabel::OBBase*, OpenBabel::OBConversion*)': >/builddir/build/BUILD/openbabel-2.3.2/src/formats/gamessformat.cpp:577:40: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] > for (unsigned int i = 0; i < newModes; ++i) { > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/formats/gamessformat.cpp:613:44: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] > for (unsigned int i = 0; i < modeCount; ++i) { > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/formats/gamessformat.cpp:614:25: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] > if (i >= modeCount - newModes){ > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/formats/gamessformat.cpp:233:9: warning: variable 'ndummyatoms' set but not used [-Wunused-but-set-variable] > int ndummyatoms = 0; > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/formats/gamessukformat.cpp: In member function 'bool OpenBabel::GAMESSUKOutputFormat::ReadInitialCartesian(OpenBabel::OBMol&, std::istream&)': >/builddir/build/BUILD/openbabel-2.3.2/src/formats/gamessukformat.cpp:779:10: warning: variable 'ok' set but not used [-Wunused-but-set-variable] > bool ok=false; > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/formats/gamessukformat.cpp: In member function 'bool OpenBabel::GAMESSUKOutputFormat::ReadOptGeomXyz1(OpenBabel::OBMol&, std::istream&)': >/builddir/build/BUILD/openbabel-2.3.2/src/formats/gamessukformat.cpp:845:12: warning: variable 'ok' set but not used [-Wunused-but-set-variable] > bool ok=false; > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/formats/gamessukformat.cpp: In member function 'bool OpenBabel::GAMESSUKOutputFormat::ReadOptGeomXyz2(OpenBabel::OBMol&, std::istream&)': >/builddir/build/BUILD/openbabel-2.3.2/src/formats/gamessukformat.cpp:892:12: warning: variable 'ok' set but not used [-Wunused-but-set-variable] > bool ok=false; > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/formats/gamessukformat.cpp: In member function 'virtual bool OpenBabel::GAMESSUKOutputFormat::ReadMolecule(OpenBabel::OBBase*, OpenBabel::OBConversion*)': >/builddir/build/BUILD/openbabel-2.3.2/src/formats/gamessukformat.cpp:1207:12: warning: variable 'ok' set but not used [-Wunused-but-set-variable] > bool ok; > ^ >Linking CXX shared module ../../lib/fpsformat.so >cd /builddir/build/BUILD/openbabel-2.3.2/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/fpsformat.dir/link.txt --verbose=1 >/usr/bin/c++ -fPIC -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -Wl,-soname,fpsformat.so -o ../../lib/fpsformat.so CMakeFiles/fpsformat.dir/fpsformat.o -lm -ldl -lz -lcairo -linchi -lm ../../lib/libopenbabel.so.4.0.2 -lm -ldl -lz >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 52%] Built target fpsformat >make -f src/formats/CMakeFiles/gausscubeformat.dir/build.make src/formats/CMakeFiles/gausscubeformat.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/gausscubeformat.dir/DependInfo.cmake --color= >Dependee "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/gausscubeformat.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/gausscubeformat.dir/depend.internal". >Dependee "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/gausscubeformat.dir/depend.internal". >Scanning dependencies of target gausscubeformat >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f src/formats/CMakeFiles/gausscubeformat.dir/build.make src/formats/CMakeFiles/gausscubeformat.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles 19 >[ 53%] Linking CXX shared module ../../lib/freefracformat.so >cd /builddir/build/BUILD/openbabel-2.3.2/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/freefracformat.dir/link.txt --verbose=1 >Building CXX object src/formats/CMakeFiles/gausscubeformat.dir/gausscubeformat.o >cd /builddir/build/BUILD/openbabel-2.3.2/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dgausscubeformat_EXPORTS -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -o CMakeFiles/gausscubeformat.dir/gausscubeformat.o -c /builddir/build/BUILD/openbabel-2.3.2/src/formats/gausscubeformat.cpp >/usr/bin/c++ -fPIC -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -Wl,-soname,freefracformat.so -o ../../lib/freefracformat.so CMakeFiles/freefracformat.dir/freefracformat.o -lm -ldl -lz -lcairo -linchi -lm ../../lib/libopenbabel.so.4.0.2 -lm -ldl -lz >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles 18 >[ 53%] Built target freefracformat >make -f src/formats/CMakeFiles/gaussformat.dir/build.make src/formats/CMakeFiles/gaussformat.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/gaussformat.dir/DependInfo.cmake --color= >Dependee "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/gaussformat.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/gaussformat.dir/depend.internal". >Dependee "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/gaussformat.dir/depend.internal". >Scanning dependencies of target gaussformat >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f src/formats/CMakeFiles/gaussformat.dir/build.make src/formats/CMakeFiles/gaussformat.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 53%] Building CXX object src/formats/CMakeFiles/gaussformat.dir/gaussformat.o >cd /builddir/build/BUILD/openbabel-2.3.2/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dgaussformat_EXPORTS -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -o CMakeFiles/gaussformat.dir/gaussformat.o -c /builddir/build/BUILD/openbabel-2.3.2/src/formats/gaussformat.cpp >/builddir/build/BUILD/openbabel-2.3.2/src/formats/gausscubeformat.cpp: In member function 'virtual bool OpenBabel::OBGaussianCubeFormat::ReadMolecule(OpenBabel::OBBase*, OpenBabel::OBConversion*)': >/builddir/build/BUILD/openbabel-2.3.2/src/formats/gausscubeformat.cpp:425:25: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] > while (vgd.size() < nCubes) > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/formats/gausscubeformat.cpp:472:26: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] > while (values.size() < n*nCubes) > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/formats/gausscubeformat.cpp:107:17: warning: unused variable 'title' [-Wunused-variable] > const char* title = pConv->GetTitle(); > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/formats/gaussformat.cpp: In member function 'virtual bool OpenBabel::GaussianOutputFormat::ReadMolecule(OpenBabel::OBBase*, OpenBabel::OBConversion*)': >/builddir/build/BUILD/openbabel-2.3.2/src/formats/gaussformat.cpp:328:26: warning: left operand of comma operator has no effect [-Wunused-value] > for(unsigned i=0; i<115, ifs; ++i) > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/formats/gamessformat.cpp:559:62: warning: 'lowFreqModesEnd' may be used uninitialized in this function [-Wmaybe-uninitialized] > if (numIntens < lowFreqModesBegin || numIntens > lowFreqModesEnd) > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/formats/gamessformat.cpp:559:29: warning: 'lowFreqModesBegin' may be used uninitialized in this function [-Wmaybe-uninitialized] > if (numIntens < lowFreqModesBegin || numIntens > lowFreqModesEnd) > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/formats/gamessformat.cpp:725:7: warning: 'aHOMO' may be used uninitialized in this function [-Wmaybe-uninitialized] > if (aHOMO == bHOMO) { > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/formats/gaussformat.cpp:761:33: warning: 'betaStart' may be used uninitialized in this function [-Wmaybe-uninitialized] > for (unsigned int i = betaStart; i < initialSize; ++i) { > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/formats/gaussformat.cpp:774:68: warning: 'bHOMO' may be used uninitialized in this function [-Wmaybe-uninitialized] > od->LoadBetaOrbitals(betaOrbitals, betaSymmetries, bHOMO); > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/formats/gaussformat.cpp:773:61: warning: 'aHOMO' may be used uninitialized in this function [-Wmaybe-uninitialized] > od->LoadAlphaOrbitals(orbitals, symmetries, aHOMO); > ^ >In file included from /builddir/build/BUILD/openbabel-2.3.2/include/openbabel/mol.h:51:0, > from /builddir/build/BUILD/openbabel-2.3.2/include/openbabel/obmolecformat.h:34, > from /builddir/build/BUILD/openbabel-2.3.2/src/formats/gaussformat.cpp:17: >/builddir/build/BUILD/openbabel-2.3.2/include/openbabel/generic.h:1014:22: warning: 'RotorType' may be used uninitialized in this function [-Wmaybe-uninitialized] > type = RotorType; > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/formats/gaussformat.cpp:306:27: note: 'RotorType' was declared here > OBRotationData::RType RotorType; > ^ >Linking CXX shared module ../../lib/gamessukformat.so >cd /builddir/build/BUILD/openbabel-2.3.2/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/gamessukformat.dir/link.txt --verbose=1 >/usr/bin/c++ -fPIC -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -Wl,-soname,gamessukformat.so -o ../../lib/gamessukformat.so CMakeFiles/gamessukformat.dir/gamessukformat.o -lm -ldl -lz -lcairo -linchi -lm ../../lib/libopenbabel.so.4.0.2 -lm -ldl -lz >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 53%] Built target gamessukformat >make -f src/formats/CMakeFiles/gausszmatformat.dir/build.make src/formats/CMakeFiles/gausszmatformat.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/gausszmatformat.dir/DependInfo.cmake --color= >Dependee "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/gausszmatformat.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/gausszmatformat.dir/depend.internal". >Dependee "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/gausszmatformat.dir/depend.internal". >Scanning dependencies of target gausszmatformat >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f src/formats/CMakeFiles/gausszmatformat.dir/build.make src/formats/CMakeFiles/gausszmatformat.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles 20 >[ 54%] Building CXX object src/formats/CMakeFiles/gausszmatformat.dir/gausszmatformat.o >cd /builddir/build/BUILD/openbabel-2.3.2/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dgausszmatformat_EXPORTS -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -o CMakeFiles/gausszmatformat.dir/gausszmatformat.o -c /builddir/build/BUILD/openbabel-2.3.2/src/formats/gausszmatformat.cpp >Linking CXX shared module ../../lib/gamessformat.so >cd /builddir/build/BUILD/openbabel-2.3.2/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/gamessformat.dir/link.txt --verbose=1 >/usr/bin/c++ -fPIC -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -Wl,-soname,gamessformat.so -o ../../lib/gamessformat.so CMakeFiles/gamessformat.dir/gamessformat.o -lm -ldl -lz -lcairo -linchi -lm ../../lib/libopenbabel.so.4.0.2 -lm -ldl -lz >Linking CXX shared module ../../lib/gausscubeformat.so >cd /builddir/build/BUILD/openbabel-2.3.2/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/gausscubeformat.dir/link.txt --verbose=1 >/usr/bin/c++ -fPIC -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -Wl,-soname,gausscubeformat.so -o ../../lib/gausscubeformat.so CMakeFiles/gausscubeformat.dir/gausscubeformat.o -lm -ldl -lz -lcairo -linchi -lm ../../lib/libopenbabel.so.4.0.2 -lm -ldl -lz >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 54%] Built target gamessformat >make -f src/formats/CMakeFiles/ghemicalformat.dir/build.make src/formats/CMakeFiles/ghemicalformat.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/ghemicalformat.dir/DependInfo.cmake --color= >Dependee "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/ghemicalformat.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/ghemicalformat.dir/depend.internal". >Dependee "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/ghemicalformat.dir/depend.internal". >Scanning dependencies of target ghemicalformat >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f src/formats/CMakeFiles/ghemicalformat.dir/build.make src/formats/CMakeFiles/ghemicalformat.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 54%] Building CXX object src/formats/CMakeFiles/ghemicalformat.dir/ghemicalformat.o >cd /builddir/build/BUILD/openbabel-2.3.2/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dghemicalformat_EXPORTS -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -o CMakeFiles/ghemicalformat.dir/ghemicalformat.o -c /builddir/build/BUILD/openbabel-2.3.2/src/formats/ghemicalformat.cpp >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles 19 >[ 54%] Built target gausscubeformat >make -f src/formats/CMakeFiles/groformat.dir/build.make src/formats/CMakeFiles/groformat.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/groformat.dir/DependInfo.cmake --color= >Dependee "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/groformat.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/groformat.dir/depend.internal". >Dependee "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/groformat.dir/depend.internal". >Scanning dependencies of target groformat >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f src/formats/CMakeFiles/groformat.dir/build.make src/formats/CMakeFiles/groformat.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 54%] Building CXX object src/formats/CMakeFiles/groformat.dir/groformat.o >cd /builddir/build/BUILD/openbabel-2.3.2/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dgroformat_EXPORTS -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -o CMakeFiles/groformat.dir/groformat.o -c /builddir/build/BUILD/openbabel-2.3.2/src/formats/groformat.cpp >Linking CXX shared module ../../lib/gaussformat.so >cd /builddir/build/BUILD/openbabel-2.3.2/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/gaussformat.dir/link.txt --verbose=1 >/usr/bin/c++ -fPIC -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -Wl,-soname,gaussformat.so -o ../../lib/gaussformat.so CMakeFiles/gaussformat.dir/gaussformat.o -lm -ldl -lz -lcairo -linchi -lm ../../lib/libopenbabel.so.4.0.2 -lm -ldl -lz >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 54%] Built target gaussformat >make -f src/formats/CMakeFiles/gromos96format.dir/build.make src/formats/CMakeFiles/gromos96format.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/gromos96format.dir/DependInfo.cmake --color= >Dependee "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/gromos96format.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/gromos96format.dir/depend.internal". >Dependee "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/gromos96format.dir/depend.internal". >Scanning dependencies of target gromos96format >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f src/formats/CMakeFiles/gromos96format.dir/build.make src/formats/CMakeFiles/gromos96format.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles 21 >[ 55%] Building CXX object src/formats/CMakeFiles/gromos96format.dir/gromos96format.o >cd /builddir/build/BUILD/openbabel-2.3.2/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dgromos96format_EXPORTS -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -o CMakeFiles/gromos96format.dir/gromos96format.o -c /builddir/build/BUILD/openbabel-2.3.2/src/formats/gromos96format.cpp >Linking CXX shared module ../../lib/ghemicalformat.so >cd /builddir/build/BUILD/openbabel-2.3.2/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/ghemicalformat.dir/link.txt --verbose=1 >/usr/bin/c++ -fPIC -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -Wl,-soname,ghemicalformat.so -o ../../lib/ghemicalformat.so CMakeFiles/ghemicalformat.dir/ghemicalformat.o -lm -ldl -lz -lcairo -linchi -lm ../../lib/libopenbabel.so.4.0.2 -lm -ldl -lz >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 55%] Built target ghemicalformat >make -f src/formats/CMakeFiles/gulpformat.dir/build.make src/formats/CMakeFiles/gulpformat.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/gulpformat.dir/DependInfo.cmake --color= >Dependee "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/gulpformat.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/gulpformat.dir/depend.internal". >Dependee "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/gulpformat.dir/depend.internal". >Scanning dependencies of target gulpformat >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f src/formats/CMakeFiles/gulpformat.dir/build.make src/formats/CMakeFiles/gulpformat.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 55%] Building CXX object src/formats/CMakeFiles/gulpformat.dir/gulpformat.o >cd /builddir/build/BUILD/openbabel-2.3.2/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dgulpformat_EXPORTS -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -o CMakeFiles/gulpformat.dir/gulpformat.o -c /builddir/build/BUILD/openbabel-2.3.2/src/formats/gulpformat.cpp >/builddir/build/BUILD/openbabel-2.3.2/src/formats/groformat.cpp: In member function 'virtual bool OpenBabel::GROFormat::ReadMolecule(OpenBabel::OBBase*, OpenBabel::OBConversion*)': >/builddir/build/BUILD/openbabel-2.3.2/src/formats/groformat.cpp:273:25: warning: 'res' may be used uninitialized in this function [-Wmaybe-uninitialized] > res->AddAtom(atom); > ^ >Linking CXX shared module ../../lib/gausszmatformat.so >cd /builddir/build/BUILD/openbabel-2.3.2/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/gausszmatformat.dir/link.txt --verbose=1 >/usr/bin/c++ -fPIC -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -Wl,-soname,gausszmatformat.so -o ../../lib/gausszmatformat.so CMakeFiles/gausszmatformat.dir/gausszmatformat.o -lm -ldl -lz -lcairo -linchi -lm ../../lib/libopenbabel.so.4.0.2 -lm -ldl -lz >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles 20 >[ 55%] Built target gausszmatformat >make -f src/formats/CMakeFiles/hinformat.dir/build.make src/formats/CMakeFiles/hinformat.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/hinformat.dir/DependInfo.cmake --color= >Dependee "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/hinformat.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/hinformat.dir/depend.internal". >Dependee "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/hinformat.dir/depend.internal". >Scanning dependencies of target hinformat >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f src/formats/CMakeFiles/hinformat.dir/build.make src/formats/CMakeFiles/hinformat.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 55%] Building CXX object src/formats/CMakeFiles/hinformat.dir/hinformat.o >cd /builddir/build/BUILD/openbabel-2.3.2/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dhinformat_EXPORTS -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -o CMakeFiles/hinformat.dir/hinformat.o -c /builddir/build/BUILD/openbabel-2.3.2/src/formats/hinformat.cpp >Linking CXX shared module ../../lib/gromos96format.so >cd /builddir/build/BUILD/openbabel-2.3.2/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/gromos96format.dir/link.txt --verbose=1 >/usr/bin/c++ -fPIC -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -Wl,-soname,gromos96format.so -o ../../lib/gromos96format.so CMakeFiles/gromos96format.dir/gromos96format.o -lm -ldl -lz -lcairo -linchi -lm ../../lib/libopenbabel.so.4.0.2 -lm -ldl -lz >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles 21 >[ 55%] Built target gromos96format >make -f src/formats/CMakeFiles/inchiformat.dir/build.make src/formats/CMakeFiles/inchiformat.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/inchiformat.dir/DependInfo.cmake --color= >Dependee "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/inchiformat.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/inchiformat.dir/depend.internal". >Dependee "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/inchiformat.dir/depend.internal". >Scanning dependencies of target inchiformat >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f src/formats/CMakeFiles/inchiformat.dir/build.make src/formats/CMakeFiles/inchiformat.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles 22 >[ 56%] Building CXX object src/formats/CMakeFiles/inchiformat.dir/inchiformat.o >cd /builddir/build/BUILD/openbabel-2.3.2/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dinchiformat_EXPORTS -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -o CMakeFiles/inchiformat.dir/inchiformat.o -c /builddir/build/BUILD/openbabel-2.3.2/src/formats/inchiformat.cpp >Linking CXX shared module ../../lib/groformat.so >cd /builddir/build/BUILD/openbabel-2.3.2/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/groformat.dir/link.txt --verbose=1 >/usr/bin/c++ -fPIC -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -Wl,-soname,groformat.so -o ../../lib/groformat.so CMakeFiles/groformat.dir/groformat.o -lm -ldl -lz -lcairo -linchi -lm ../../lib/libopenbabel.so.4.0.2 -lm -ldl -lz >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 56%] Built target groformat >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 56%] Building CXX object src/formats/CMakeFiles/inchiformat.dir/getinchi.o >cd /builddir/build/BUILD/openbabel-2.3.2/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dinchiformat_EXPORTS -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -o CMakeFiles/inchiformat.dir/getinchi.o -c /builddir/build/BUILD/openbabel-2.3.2/src/formats/getinchi.cpp >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 56%] Building CXX object src/formats/CMakeFiles/inchiformat.dir/__/ops/unique.o >Linking CXX shared module ../../lib/hinformat.so >cd /builddir/build/BUILD/openbabel-2.3.2/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/hinformat.dir/link.txt --verbose=1 >cd /builddir/build/BUILD/openbabel-2.3.2/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dinchiformat_EXPORTS -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -o CMakeFiles/inchiformat.dir/__/ops/unique.o -c /builddir/build/BUILD/openbabel-2.3.2/src/ops/unique.cpp >/usr/bin/c++ -fPIC -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -Wl,-soname,hinformat.so -o ../../lib/hinformat.so CMakeFiles/hinformat.dir/hinformat.o -lm -ldl -lz -lcairo -linchi -lm ../../lib/libopenbabel.so.4.0.2 -lm -ldl -lz >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 56%] Built target hinformat >make -f src/formats/CMakeFiles/jaguarformat.dir/build.make src/formats/CMakeFiles/jaguarformat.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/jaguarformat.dir/DependInfo.cmake --color= >Dependee "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/jaguarformat.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/jaguarformat.dir/depend.internal". >Dependee "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/jaguarformat.dir/depend.internal". >Scanning dependencies of target jaguarformat >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f src/formats/CMakeFiles/jaguarformat.dir/build.make src/formats/CMakeFiles/jaguarformat.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles 23 >[ 57%] Building CXX object src/formats/CMakeFiles/jaguarformat.dir/jaguarformat.o >cd /builddir/build/BUILD/openbabel-2.3.2/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Djaguarformat_EXPORTS -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -o CMakeFiles/jaguarformat.dir/jaguarformat.o -c /builddir/build/BUILD/openbabel-2.3.2/src/formats/jaguarformat.cpp >/builddir/build/BUILD/openbabel-2.3.2/src/formats/inchiformat.cpp: In member function 'virtual bool OpenBabel::InChIFormat::ReadMolecule(OpenBabel::OBBase*, OpenBabel::OBConversion*)': >/builddir/build/BUILD/openbabel-2.3.2/src/formats/inchiformat.cpp:189:52: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] > if ( !(a->GetId() == ct->end || a->GetId() == stereo.neighbor[0] ) ) { > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/formats/inchiformat.cpp:195:54: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] > if ( !(b->GetId() == ct->begin || b->GetId() == stereo.neighbor[3] ) ) { > ^ >Linking CXX shared module ../../lib/gulpformat.so >cd /builddir/build/BUILD/openbabel-2.3.2/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/gulpformat.dir/link.txt --verbose=1 >/usr/bin/c++ -fPIC -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -Wl,-soname,gulpformat.so -o ../../lib/gulpformat.so CMakeFiles/gulpformat.dir/gulpformat.o -lm -ldl -lz -lcairo -linchi -lm ../../lib/libopenbabel.so.4.0.2 -lm -ldl -lz >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 57%] Built target gulpformat >make -f src/formats/CMakeFiles/lmpdatformat.dir/build.make src/formats/CMakeFiles/lmpdatformat.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/lmpdatformat.dir/DependInfo.cmake --color= >Dependee "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/lmpdatformat.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/lmpdatformat.dir/depend.internal". >Dependee "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/lmpdatformat.dir/depend.internal". >Scanning dependencies of target lmpdatformat >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f src/formats/CMakeFiles/lmpdatformat.dir/build.make src/formats/CMakeFiles/lmpdatformat.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 57%] Building CXX object src/formats/CMakeFiles/lmpdatformat.dir/lmpdatformat.o >cd /builddir/build/BUILD/openbabel-2.3.2/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dlmpdatformat_EXPORTS -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -o CMakeFiles/lmpdatformat.dir/lmpdatformat.o -c /builddir/build/BUILD/openbabel-2.3.2/src/formats/lmpdatformat.cpp >/builddir/build/BUILD/openbabel-2.3.2/src/formats/lmpdatformat.cpp: In member function 'virtual bool OpenBabel::LMPDATFormat::WriteMolecule(OpenBabel::OBBase*, OpenBabel::OBConversion*)': >/builddir/build/BUILD/openbabel-2.3.2/src/formats/lmpdatformat.cpp:271:13: warning: unused variable 'length' [-Wunused-variable] > double length=cmax-cmin; > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/formats/lmpdatformat.cpp:361:11: warning: unused variable 'atomid' [-Wunused-variable] > int atomid=5; > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/formats/lmpdatformat.cpp:362:14: warning: unused variable 'charge' [-Wunused-variable] > double charge=0.5; > ^ >make -f src/formats/CMakeFiles/mdlformat.dir/build.make src/formats/CMakeFiles/mdlformat.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/mdlformat.dir/DependInfo.cmake --color= >Dependee "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/mdlformat.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/mdlformat.dir/depend.internal". >Dependee "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/mdlformat.dir/depend.internal". >Scanning dependencies of target mdlformat >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f src/formats/CMakeFiles/mdlformat.dir/build.make src/formats/CMakeFiles/mdlformat.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 57%] Building CXX object src/formats/CMakeFiles/mdlformat.dir/mdlformat.o >cd /builddir/build/BUILD/openbabel-2.3.2/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dmdlformat_EXPORTS -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -o CMakeFiles/mdlformat.dir/mdlformat.o -c /builddir/build/BUILD/openbabel-2.3.2/src/formats/mdlformat.cpp >Linking CXX shared module ../../lib/jaguarformat.so >cd /builddir/build/BUILD/openbabel-2.3.2/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/jaguarformat.dir/link.txt --verbose=1 >/usr/bin/c++ -fPIC -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -Wl,-soname,jaguarformat.so -o ../../lib/jaguarformat.so CMakeFiles/jaguarformat.dir/jaguarformat.o -lm -ldl -lz -lcairo -linchi -lm ../../lib/libopenbabel.so.4.0.2 -lm -ldl -lz >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles 23 >[ 57%] Built target jaguarformat >make -f src/formats/CMakeFiles/mmcifformat.dir/build.make src/formats/CMakeFiles/mmcifformat.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/mmcifformat.dir/DependInfo.cmake --color= >Dependee "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/mmcifformat.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/mmcifformat.dir/depend.internal". >Dependee "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/mmcifformat.dir/depend.internal". >Scanning dependencies of target mmcifformat >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f src/formats/CMakeFiles/mmcifformat.dir/build.make src/formats/CMakeFiles/mmcifformat.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles 24 >[ 58%] Building CXX object src/formats/CMakeFiles/mmcifformat.dir/mmcifformat.o >cd /builddir/build/BUILD/openbabel-2.3.2/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dmmcifformat_EXPORTS -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -o CMakeFiles/mmcifformat.dir/mmcifformat.o -c /builddir/build/BUILD/openbabel-2.3.2/src/formats/mmcifformat.cpp >/builddir/build/BUILD/openbabel-2.3.2/src/formats/mdlformat.cpp: In member function 'bool OpenBabel::MDLFormat::ReadAtomBlock(std::istream&, OpenBabel::OBMol&, OpenBabel::OBConversion*)': >/builddir/build/BUILD/openbabel-2.3.2/src/formats/mdlformat.cpp:1095:10: warning: unused variable 'chiralWatch' [-Wunused-variable] > bool chiralWatch=false; > ^ >Linking CXX shared module ../../lib/inchiformat.so >cd /builddir/build/BUILD/openbabel-2.3.2/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/inchiformat.dir/link.txt --verbose=1 >/usr/bin/c++ -fPIC -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -Wl,-soname,inchiformat.so -o ../../lib/inchiformat.so CMakeFiles/inchiformat.dir/inchiformat.o CMakeFiles/inchiformat.dir/getinchi.o CMakeFiles/inchiformat.dir/__/ops/unique.o -lm -ldl -lz -lcairo -linchi -lm ../../lib/libopenbabel.so.4.0.2 -lm -ldl -lz >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles 22 >[ 58%] Built target inchiformat >make -f src/formats/CMakeFiles/mmodformat.dir/build.make src/formats/CMakeFiles/mmodformat.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/mmodformat.dir/DependInfo.cmake --color= >Dependee "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/mmodformat.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/mmodformat.dir/depend.internal". >Dependee "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/mmodformat.dir/depend.internal". >Scanning dependencies of target mmodformat >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f src/formats/CMakeFiles/mmodformat.dir/build.make src/formats/CMakeFiles/mmodformat.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 58%] Building CXX object src/formats/CMakeFiles/mmodformat.dir/mmodformat.o >cd /builddir/build/BUILD/openbabel-2.3.2/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dmmodformat_EXPORTS -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -o CMakeFiles/mmodformat.dir/mmodformat.o -c /builddir/build/BUILD/openbabel-2.3.2/src/formats/mmodformat.cpp >Linking CXX shared module ../../lib/lmpdatformat.so >cd /builddir/build/BUILD/openbabel-2.3.2/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/lmpdatformat.dir/link.txt --verbose=1 >/usr/bin/c++ -fPIC -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -Wl,-soname,lmpdatformat.so -o ../../lib/lmpdatformat.so CMakeFiles/lmpdatformat.dir/lmpdatformat.o -lm -ldl -lz -lcairo -linchi -lm ../../lib/libopenbabel.so.4.0.2 -lm -ldl -lz >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 58%] Built target lmpdatformat >make -f src/formats/CMakeFiles/mol2format.dir/build.make src/formats/CMakeFiles/mol2format.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/mol2format.dir/DependInfo.cmake --color= >Dependee "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/mol2format.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/mol2format.dir/depend.internal". >Dependee "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/mol2format.dir/depend.internal". >Scanning dependencies of target mol2format >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f src/formats/CMakeFiles/mol2format.dir/build.make src/formats/CMakeFiles/mol2format.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 58%] Building CXX object src/formats/CMakeFiles/mol2format.dir/mol2format.o >cd /builddir/build/BUILD/openbabel-2.3.2/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dmol2format_EXPORTS -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -o CMakeFiles/mol2format.dir/mol2format.o -c /builddir/build/BUILD/openbabel-2.3.2/src/formats/mol2format.cpp >/builddir/build/BUILD/openbabel-2.3.2/src/formats/mol2format.cpp: In member function 'virtual bool OpenBabel::MOL2Format::ReadMolecule(OpenBabel::OBBase*, OpenBabel::OBConversion*)': >/builddir/build/BUILD/openbabel-2.3.2/src/formats/mol2format.cpp:374:99: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] > if (n_h_bonded < min_n_h_bonded || (n_h_bonded == min_n_h_bonded && partner->GetIdx() < min_idx)) { > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/formats/mol2format.cpp:397:35: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] > if (partner->GetIdx() == min_idx) { > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/formats/mol2format.cpp: In member function 'virtual int OpenBabel::MOL2Format::SkipObjects(int, OpenBabel::OBConversion*)': >/builddir/build/BUILD/openbabel-2.3.2/src/formats/mol2format.cpp:607:10: warning: unused variable 'ch' [-Wunused-variable] > char ch = ifs.peek(); > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/formats/mdlformat.cpp: In member function 'void OpenBabel::MDLFormat::CisTransFromUpDown(OpenBabel::OBMol*, std::map<OpenBabel::OBBond*, OpenBabel::OBStereo::BondDirection>*)': >/builddir/build/BUILD/openbabel-2.3.2/src/formats/mdlformat.cpp:1721:58: warning: 'a2_stereo' may be used uninitialized in this function [-Wmaybe-uninitialized] > if (a1_stereo == OBStereo::UnknownDir || a2_stereo == OBStereo::UnknownDir) > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/formats/mdlformat.cpp:1721:21: warning: 'a1_stereo' may be used uninitialized in this function [-Wmaybe-uninitialized] > if (a1_stereo == OBStereo::UnknownDir || a2_stereo == OBStereo::UnknownDir) > ^ >Linking CXX shared module ../../lib/mmcifformat.so >cd /builddir/build/BUILD/openbabel-2.3.2/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/mmcifformat.dir/link.txt --verbose=1 >/usr/bin/c++ -fPIC -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -Wl,-soname,mmcifformat.so -o ../../lib/mmcifformat.so CMakeFiles/mmcifformat.dir/mmcifformat.o -lm -ldl -lz -lcairo -linchi -lm ../../lib/libopenbabel.so.4.0.2 -lm -ldl -lz >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles 24 >[ 58%] Built target mmcifformat >make -f src/formats/CMakeFiles/moldenformat.dir/build.make src/formats/CMakeFiles/moldenformat.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/moldenformat.dir/DependInfo.cmake --color= >Dependee "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/moldenformat.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/moldenformat.dir/depend.internal". >Dependee "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/moldenformat.dir/depend.internal". >Scanning dependencies of target moldenformat >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f src/formats/CMakeFiles/moldenformat.dir/build.make src/formats/CMakeFiles/moldenformat.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles 25 >[ 59%] Building CXX object src/formats/CMakeFiles/moldenformat.dir/moldenformat.o >cd /builddir/build/BUILD/openbabel-2.3.2/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dmoldenformat_EXPORTS -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -o CMakeFiles/moldenformat.dir/moldenformat.o -c /builddir/build/BUILD/openbabel-2.3.2/src/formats/moldenformat.cpp >Linking CXX shared module ../../lib/mmodformat.so >cd /builddir/build/BUILD/openbabel-2.3.2/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/mmodformat.dir/link.txt --verbose=1 >/usr/bin/c++ -fPIC -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -Wl,-soname,mmodformat.so -o ../../lib/mmodformat.so CMakeFiles/mmodformat.dir/mmodformat.o -lm -ldl -lz -lcairo -linchi -lm ../../lib/libopenbabel.so.4.0.2 -lm -ldl -lz >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 59%] Built target mmodformat >make -f src/formats/CMakeFiles/molproformat.dir/build.make src/formats/CMakeFiles/molproformat.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/molproformat.dir/DependInfo.cmake --color= >Dependee "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/molproformat.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/molproformat.dir/depend.internal". >Dependee "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/molproformat.dir/depend.internal". >Scanning dependencies of target molproformat >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f src/formats/CMakeFiles/molproformat.dir/build.make src/formats/CMakeFiles/molproformat.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 59%] Building CXX object src/formats/CMakeFiles/molproformat.dir/molproformat.o >cd /builddir/build/BUILD/openbabel-2.3.2/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dmolproformat_EXPORTS -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -o CMakeFiles/molproformat.dir/molproformat.o -c /builddir/build/BUILD/openbabel-2.3.2/src/formats/molproformat.cpp >/builddir/build/BUILD/openbabel-2.3.2/src/formats/mol2format.cpp: In member function 'virtual bool OpenBabel::MOL2Format::ReadMolecule(OpenBabel::OBBase*, OpenBabel::OBConversion*)': >/builddir/build/BUILD/openbabel-2.3.2/src/formats/mol2format.cpp:349:32: warning: 'boundToNitrogen' may be used uninitialized in this function [-Wmaybe-uninitialized] > OBAtom *carbon, *partner, *boundToNitrogen; > ^ >Linking CXX shared module ../../lib/mol2format.so >cd /builddir/build/BUILD/openbabel-2.3.2/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/mol2format.dir/link.txt --verbose=1 >/usr/bin/c++ -fPIC -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -Wl,-soname,mol2format.so -o ../../lib/mol2format.so CMakeFiles/mol2format.dir/mol2format.o -lm -ldl -lz -lcairo -linchi -lm ../../lib/libopenbabel.so.4.0.2 -lm -ldl -lz >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 59%] Built target mol2format >make -f src/formats/CMakeFiles/molreport.dir/build.make src/formats/CMakeFiles/molreport.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/molreport.dir/DependInfo.cmake --color= >Dependee "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/molreport.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/molreport.dir/depend.internal". >Dependee "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/molreport.dir/depend.internal". >Scanning dependencies of target molreport >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f src/formats/CMakeFiles/molreport.dir/build.make src/formats/CMakeFiles/molreport.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 59%] Building CXX object src/formats/CMakeFiles/molreport.dir/molreport.o >cd /builddir/build/BUILD/openbabel-2.3.2/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dmolreport_EXPORTS -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -o CMakeFiles/molreport.dir/molreport.o -c /builddir/build/BUILD/openbabel-2.3.2/src/formats/molreport.cpp >Linking CXX shared module ../../lib/molproformat.so >cd /builddir/build/BUILD/openbabel-2.3.2/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/molproformat.dir/link.txt --verbose=1 >/usr/bin/c++ -fPIC -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -Wl,-soname,molproformat.so -o ../../lib/molproformat.so CMakeFiles/molproformat.dir/molproformat.o -lm -ldl -lz -lcairo -linchi -lm ../../lib/libopenbabel.so.4.0.2 -lm -ldl -lz >Linking CXX shared module ../../lib/mdlformat.so >cd /builddir/build/BUILD/openbabel-2.3.2/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/mdlformat.dir/link.txt --verbose=1 >/usr/bin/c++ -fPIC -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -Wl,-soname,mdlformat.so -o ../../lib/mdlformat.so CMakeFiles/mdlformat.dir/mdlformat.o -lm -ldl -lz -lcairo -linchi -lm ../../lib/libopenbabel.so.4.0.2 -lm -ldl -lz >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 59%] Built target molproformat >make -f src/formats/CMakeFiles/mopacformat.dir/build.make src/formats/CMakeFiles/mopacformat.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/mopacformat.dir/DependInfo.cmake --color= >Dependee "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/mopacformat.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/mopacformat.dir/depend.internal". >Dependee "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/mopacformat.dir/depend.internal". >Scanning dependencies of target mopacformat >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f src/formats/CMakeFiles/mopacformat.dir/build.make src/formats/CMakeFiles/mopacformat.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles 26 >[ 60%] Building CXX object src/formats/CMakeFiles/mopacformat.dir/mopacformat.o >cd /builddir/build/BUILD/openbabel-2.3.2/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dmopacformat_EXPORTS -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -o CMakeFiles/mopacformat.dir/mopacformat.o -c /builddir/build/BUILD/openbabel-2.3.2/src/formats/mopacformat.cpp >Linking CXX shared module ../../lib/molreport.so >cd /builddir/build/BUILD/openbabel-2.3.2/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/molreport.dir/link.txt --verbose=1 >Linking CXX shared module ../../lib/moldenformat.so >cd /builddir/build/BUILD/openbabel-2.3.2/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/moldenformat.dir/link.txt --verbose=1 >/usr/bin/c++ -fPIC -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -Wl,-soname,molreport.so -o ../../lib/molreport.so CMakeFiles/molreport.dir/molreport.o -lm -ldl -lz -lcairo -linchi -lm ../../lib/libopenbabel.so.4.0.2 -lm -ldl -lz >/usr/bin/c++ -fPIC -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -Wl,-soname,moldenformat.so -o ../../lib/moldenformat.so CMakeFiles/moldenformat.dir/moldenformat.o -lm -ldl -lz -lcairo -linchi -lm ../../lib/libopenbabel.so.4.0.2 -lm -ldl -lz >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 60%] Built target mdlformat >make -f src/formats/CMakeFiles/mpdformat.dir/build.make src/formats/CMakeFiles/mpdformat.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/mpdformat.dir/DependInfo.cmake --color= >Dependee "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/mpdformat.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/mpdformat.dir/depend.internal". >Dependee "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/mpdformat.dir/depend.internal". >Scanning dependencies of target mpdformat >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f src/formats/CMakeFiles/mpdformat.dir/build.make src/formats/CMakeFiles/mpdformat.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 60%] Building CXX object src/formats/CMakeFiles/mpdformat.dir/mpdformat.o >cd /builddir/build/BUILD/openbabel-2.3.2/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dmpdformat_EXPORTS -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -o CMakeFiles/mpdformat.dir/mpdformat.o -c /builddir/build/BUILD/openbabel-2.3.2/src/formats/mpdformat.cpp >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 60%] Built target molreport >make -f src/formats/CMakeFiles/mpqcformat.dir/build.make src/formats/CMakeFiles/mpqcformat.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/mpqcformat.dir/DependInfo.cmake --color= >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles 25 >Dependee "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/mpqcformat.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/mpqcformat.dir/depend.internal". >Dependee "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/mpqcformat.dir/depend.internal". >[ 60%] Built target moldenformat >make -f src/formats/CMakeFiles/msiformat.dir/build.make src/formats/CMakeFiles/msiformat.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/msiformat.dir/DependInfo.cmake --color= >Scanning dependencies of target mpqcformat >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f src/formats/CMakeFiles/mpqcformat.dir/build.make src/formats/CMakeFiles/mpqcformat.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >Dependee "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/msiformat.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/msiformat.dir/depend.internal". >Dependee "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/msiformat.dir/depend.internal". >[ 60%] Scanning dependencies of target msiformat >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f src/formats/CMakeFiles/msiformat.dir/build.make src/formats/CMakeFiles/msiformat.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles 27 >Building CXX object src/formats/CMakeFiles/mpqcformat.dir/mpqcformat.o >cd /builddir/build/BUILD/openbabel-2.3.2/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dmpqcformat_EXPORTS -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -o CMakeFiles/mpqcformat.dir/mpqcformat.o -c /builddir/build/BUILD/openbabel-2.3.2/src/formats/mpqcformat.cpp >[ 61%] Building CXX object src/formats/CMakeFiles/msiformat.dir/msiformat.o >cd /builddir/build/BUILD/openbabel-2.3.2/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dmsiformat_EXPORTS -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -o CMakeFiles/msiformat.dir/msiformat.o -c /builddir/build/BUILD/openbabel-2.3.2/src/formats/msiformat.cpp >/builddir/build/BUILD/openbabel-2.3.2/src/formats/mopacformat.cpp: In member function 'virtual bool OpenBabel::MOPACCARTFormat::ReadMolecule(OpenBabel::OBBase*, OpenBabel::OBConversion*)': >/builddir/build/BUILD/openbabel-2.3.2/src/formats/mopacformat.cpp:543:19: warning: variable 'isotopeMass' set but not used [-Wunused-but-set-variable] > double x,y,z, isotopeMass; > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/formats/mpdformat.cpp: In member function 'virtual bool OpenBabel::MPDFormat::WriteMolecule(OpenBabel::OBBase*, OpenBabel::OBConversion*)': >/builddir/build/BUILD/openbabel-2.3.2/src/formats/mpdformat.cpp:204:42: warning: variable 'idx_true' set but not used [-Wunused-but-set-variable] > bool xml_true=false, pre_true=false, idx_true=false; > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/formats/msiformat.cpp: In member function 'virtual bool OpenBabel::MSIFormat::ReadMolecule(OpenBabel::OBBase*, OpenBabel::OBConversion*)': >/builddir/build/BUILD/openbabel-2.3.2/src/formats/msiformat.cpp:71:17: warning: unused variable 'title' [-Wunused-variable] > const char* title = pConv->GetTitle(); > ^ >In file included from /builddir/build/BUILD/openbabel-2.3.2/include/openbabel/mol.h:51:0, > from /builddir/build/BUILD/openbabel-2.3.2/include/openbabel/obmolecformat.h:34, > from /builddir/build/BUILD/openbabel-2.3.2/src/formats/msiformat.cpp:15: >/builddir/build/BUILD/openbabel-2.3.2/include/openbabel/generic.h:355:64: warning: 'sg' may be used uninitialized in this function [-Wmaybe-uninitialized] > void SetSpaceGroup(const SpaceGroup* sg) { _spaceGroup = sg; } > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/formats/msiformat.cpp:106:23: note: 'sg' was declared here > const SpaceGroup *sg; > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/formats/msiformat.cpp:191:49: warning: 'atom' may be used uninitialized in this function [-Wmaybe-uninitialized] > atof(vs[5].c_str())); > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/formats/msiformat.cpp:235:70: warning: 'bondOrder' may be used uninitialized in this function [-Wmaybe-uninitialized] > mol.AddBond(startBondAtom - 1, endBondAtom - 1, bondOrder); > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/formats/msiformat.cpp:235:56: warning: 'endBondAtom' may be used uninitialized in this function [-Wmaybe-uninitialized] > mol.AddBond(startBondAtom - 1, endBondAtom - 1, bondOrder); > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/formats/msiformat.cpp:235:39: warning: 'startBondAtom' may be used uninitialized in this function [-Wmaybe-uninitialized] > mol.AddBond(startBondAtom - 1, endBondAtom - 1, bondOrder); > ^ >Linking CXX shared module ../../lib/mpqcformat.so >cd /builddir/build/BUILD/openbabel-2.3.2/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/mpqcformat.dir/link.txt --verbose=1 >/usr/bin/c++ -fPIC -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -Wl,-soname,mpqcformat.so -o ../../lib/mpqcformat.so CMakeFiles/mpqcformat.dir/mpqcformat.o -lm -ldl -lz -lcairo -linchi -lm ../../lib/libopenbabel.so.4.0.2 -lm -ldl -lz >Linking CXX shared module ../../lib/mpdformat.so >cd /builddir/build/BUILD/openbabel-2.3.2/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/mpdformat.dir/link.txt --verbose=1 >/usr/bin/c++ -fPIC -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -Wl,-soname,mpdformat.so -o ../../lib/mpdformat.so CMakeFiles/mpdformat.dir/mpdformat.o -lm -ldl -lz -lcairo -linchi -lm ../../lib/libopenbabel.so.4.0.2 -lm -ldl -lz >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 61%] Built target mpdformat >make -f src/formats/CMakeFiles/msmsformat.dir/build.make src/formats/CMakeFiles/msmsformat.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/msmsformat.dir/DependInfo.cmake --color= >[ 61%] Built target mpqcformat >make -f src/formats/CMakeFiles/nulformat.dir/build.make src/formats/CMakeFiles/nulformat.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/nulformat.dir/DependInfo.cmake --color= >Dependee "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/msmsformat.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/msmsformat.dir/depend.internal". >Dependee "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/msmsformat.dir/depend.internal". >Dependee "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/nulformat.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/nulformat.dir/depend.internal". >Dependee "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/nulformat.dir/depend.internal". >Scanning dependencies of target nulformat >Scanning dependencies of target msmsformat >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f src/formats/CMakeFiles/nulformat.dir/build.make src/formats/CMakeFiles/nulformat.dir/build >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f src/formats/CMakeFiles/msmsformat.dir/build.make src/formats/CMakeFiles/msmsformat.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 61%] [ 61%] Building CXX object src/formats/CMakeFiles/nulformat.dir/nulformat.o >cd /builddir/build/BUILD/openbabel-2.3.2/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dnulformat_EXPORTS -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -o CMakeFiles/nulformat.dir/nulformat.o -c /builddir/build/BUILD/openbabel-2.3.2/src/formats/nulformat.cpp >Building CXX object src/formats/CMakeFiles/msmsformat.dir/msmsformat.o >cd /builddir/build/BUILD/openbabel-2.3.2/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dmsmsformat_EXPORTS -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -o CMakeFiles/msmsformat.dir/msmsformat.o -c /builddir/build/BUILD/openbabel-2.3.2/src/formats/msmsformat.cpp >Linking CXX shared module ../../lib/msiformat.so >cd /builddir/build/BUILD/openbabel-2.3.2/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/msiformat.dir/link.txt --verbose=1 >/usr/bin/c++ -fPIC -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -Wl,-soname,msiformat.so -o ../../lib/msiformat.so CMakeFiles/msiformat.dir/msiformat.o -lm -ldl -lz -lcairo -linchi -lm ../../lib/libopenbabel.so.4.0.2 -lm -ldl -lz >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles 27 >[ 61%] Built target msiformat >make -f src/formats/CMakeFiles/nwchemformat.dir/build.make src/formats/CMakeFiles/nwchemformat.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/nwchemformat.dir/DependInfo.cmake --color= >Dependee "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/nwchemformat.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/nwchemformat.dir/depend.internal". >Dependee "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/nwchemformat.dir/depend.internal". >Scanning dependencies of target nwchemformat >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f src/formats/CMakeFiles/nwchemformat.dir/build.make src/formats/CMakeFiles/nwchemformat.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles 28 >[ 62%] Building CXX object src/formats/CMakeFiles/nwchemformat.dir/nwchemformat.o >cd /builddir/build/BUILD/openbabel-2.3.2/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dnwchemformat_EXPORTS -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -o CMakeFiles/nwchemformat.dir/nwchemformat.o -c /builddir/build/BUILD/openbabel-2.3.2/src/formats/nwchemformat.cpp >Linking CXX shared module ../../lib/nulformat.so >cd /builddir/build/BUILD/openbabel-2.3.2/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/nulformat.dir/link.txt --verbose=1 >/usr/bin/c++ -fPIC -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -Wl,-soname,nulformat.so -o ../../lib/nulformat.so CMakeFiles/nulformat.dir/nulformat.o -lm -ldl -lz -lcairo -linchi -lm ../../lib/libopenbabel.so.4.0.2 -lm -ldl -lz >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 62%] Built target nulformat >make -f src/formats/CMakeFiles/opendxformat.dir/build.make src/formats/CMakeFiles/opendxformat.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/opendxformat.dir/DependInfo.cmake --color= >Dependee "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/opendxformat.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/opendxformat.dir/depend.internal". >Dependee "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/opendxformat.dir/depend.internal". >Scanning dependencies of target opendxformat >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f src/formats/CMakeFiles/opendxformat.dir/build.make src/formats/CMakeFiles/opendxformat.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 62%] Building CXX object src/formats/CMakeFiles/opendxformat.dir/opendxformat.o >cd /builddir/build/BUILD/openbabel-2.3.2/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dopendxformat_EXPORTS -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -o CMakeFiles/opendxformat.dir/opendxformat.o -c /builddir/build/BUILD/openbabel-2.3.2/src/formats/opendxformat.cpp >In file included from /builddir/build/BUILD/openbabel-2.3.2/include/openbabel/atom.h:35:0, > from /builddir/build/BUILD/openbabel-2.3.2/include/openbabel/mol.h:42, > from /builddir/build/BUILD/openbabel-2.3.2/include/openbabel/obmolecformat.h:34, > from /builddir/build/BUILD/openbabel-2.3.2/src/formats/mopacformat.cpp:17: >/builddir/build/BUILD/openbabel-2.3.2/include/openbabel/math/vector3.h: In member function 'virtual bool OpenBabel::MOPACFormat::ReadMolecule(OpenBabel::OBBase*, OpenBabel::OBConversion*)': >/builddir/build/BUILD/openbabel-2.3.2/include/openbabel/math/vector3.h:70:16: warning: 'y' may be used uninitialized in this function [-Wmaybe-uninitialized] > _vy = inY; > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/formats/mopacformat.cpp:73:14: note: 'y' was declared here > double x,y,z; > ^ >In file included from /builddir/build/BUILD/openbabel-2.3.2/include/openbabel/atom.h:35:0, > from /builddir/build/BUILD/openbabel-2.3.2/include/openbabel/mol.h:42, > from /builddir/build/BUILD/openbabel-2.3.2/include/openbabel/obmolecformat.h:34, > from /builddir/build/BUILD/openbabel-2.3.2/src/formats/mopacformat.cpp:17: >/builddir/build/BUILD/openbabel-2.3.2/include/openbabel/math/vector3.h:69:16: warning: 'x' may be used uninitialized in this function [-Wmaybe-uninitialized] > _vx = inX; > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/formats/mopacformat.cpp:73:12: note: 'x' was declared here > double x,y,z; > ^ >Linking CXX shared module ../../lib/msmsformat.so >cd /builddir/build/BUILD/openbabel-2.3.2/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/msmsformat.dir/link.txt --verbose=1 >/usr/bin/c++ -fPIC -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -Wl,-soname,msmsformat.so -o ../../lib/msmsformat.so CMakeFiles/msmsformat.dir/msmsformat.o -lm -ldl -lz -lcairo -linchi -lm ../../lib/libopenbabel.so.4.0.2 -lm -ldl -lz >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 62%] Built target msmsformat >make -f src/formats/CMakeFiles/outformat.dir/build.make src/formats/CMakeFiles/outformat.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/outformat.dir/DependInfo.cmake --color= >Dependee "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/outformat.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/outformat.dir/depend.internal". >Dependee "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/outformat.dir/depend.internal". >Scanning dependencies of target outformat >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f src/formats/CMakeFiles/outformat.dir/build.make src/formats/CMakeFiles/outformat.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles 57 >[ 63%] Building CXX object src/formats/CMakeFiles/outformat.dir/outformat.o >cd /builddir/build/BUILD/openbabel-2.3.2/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Doutformat_EXPORTS -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -o CMakeFiles/outformat.dir/outformat.o -c /builddir/build/BUILD/openbabel-2.3.2/src/formats/outformat.cpp >Linking CXX shared module ../../lib/mopacformat.so >cd /builddir/build/BUILD/openbabel-2.3.2/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/mopacformat.dir/link.txt --verbose=1 >/usr/bin/c++ -fPIC -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -Wl,-soname,mopacformat.so -o ../../lib/mopacformat.so CMakeFiles/mopacformat.dir/mopacformat.o -lm -ldl -lz -lcairo -linchi -lm ../../lib/libopenbabel.so.4.0.2 -lm -ldl -lz >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles 26 >[ 63%] Built target mopacformat >make -f src/formats/CMakeFiles/pcmodelformat.dir/build.make src/formats/CMakeFiles/pcmodelformat.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/pcmodelformat.dir/DependInfo.cmake --color= >Dependee "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/pcmodelformat.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/pcmodelformat.dir/depend.internal". >Dependee "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/pcmodelformat.dir/depend.internal". >Scanning dependencies of target pcmodelformat >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f src/formats/CMakeFiles/pcmodelformat.dir/build.make src/formats/CMakeFiles/pcmodelformat.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 63%] Building CXX object src/formats/CMakeFiles/pcmodelformat.dir/pcmodelformat.o >cd /builddir/build/BUILD/openbabel-2.3.2/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dpcmodelformat_EXPORTS -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -o CMakeFiles/pcmodelformat.dir/pcmodelformat.o -c /builddir/build/BUILD/openbabel-2.3.2/src/formats/pcmodelformat.cpp >Linking CXX shared module ../../lib/nwchemformat.so >cd /builddir/build/BUILD/openbabel-2.3.2/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/nwchemformat.dir/link.txt --verbose=1 >/usr/bin/c++ -fPIC -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -Wl,-soname,nwchemformat.so -o ../../lib/nwchemformat.so CMakeFiles/nwchemformat.dir/nwchemformat.o -lm -ldl -lz -lcairo -linchi -lm ../../lib/libopenbabel.so.4.0.2 -lm -ldl -lz >Linking CXX shared module ../../lib/opendxformat.so >cd /builddir/build/BUILD/openbabel-2.3.2/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/opendxformat.dir/link.txt --verbose=1 >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles 28 >/usr/bin/c++ -fPIC -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -Wl,-soname,opendxformat.so -o ../../lib/opendxformat.so CMakeFiles/opendxformat.dir/opendxformat.o -lm -ldl -lz -lcairo -linchi -lm ../../lib/libopenbabel.so.4.0.2 -lm -ldl -lz >Linking CXX shared module ../../lib/outformat.so >cd /builddir/build/BUILD/openbabel-2.3.2/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/outformat.dir/link.txt --verbose=1 >[ 63%] Built target nwchemformat >make -f src/formats/CMakeFiles/pdbformat.dir/build.make src/formats/CMakeFiles/pdbformat.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/pdbformat.dir/DependInfo.cmake --color= >/usr/bin/c++ -fPIC -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -Wl,-soname,outformat.so -o ../../lib/outformat.so CMakeFiles/outformat.dir/outformat.o -lm -ldl -lz -lcairo -linchi -lm ../../lib/libopenbabel.so.4.0.2 -lm -ldl -lz >Dependee "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/pdbformat.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/pdbformat.dir/depend.internal". >Dependee "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/pdbformat.dir/depend.internal". >Scanning dependencies of target pdbformat >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f src/formats/CMakeFiles/pdbformat.dir/build.make src/formats/CMakeFiles/pdbformat.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 63%] Building CXX object src/formats/CMakeFiles/pdbformat.dir/pdbformat.o >cd /builddir/build/BUILD/openbabel-2.3.2/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dpdbformat_EXPORTS -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -o CMakeFiles/pdbformat.dir/pdbformat.o -c /builddir/build/BUILD/openbabel-2.3.2/src/formats/pdbformat.cpp >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 63%] Built target opendxformat >make -f src/formats/CMakeFiles/pdbqtformat.dir/build.make src/formats/CMakeFiles/pdbqtformat.dir/depend >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles 57 >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/pdbqtformat.dir/DependInfo.cmake --color= >[ 63%] Built target outformat >make -f src/formats/CMakeFiles/png2format.dir/build.make src/formats/CMakeFiles/png2format.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/png2format.dir/DependInfo.cmake --color= >Dependee "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/pdbqtformat.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/pdbqtformat.dir/depend.internal". >Dependee "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/pdbqtformat.dir/depend.internal". >Dependee "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/png2format.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/png2format.dir/depend.internal". >Dependee "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/png2format.dir/depend.internal". >Scanning dependencies of target pdbqtformat >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f src/formats/CMakeFiles/pdbqtformat.dir/build.make src/formats/CMakeFiles/pdbqtformat.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles 58 >Scanning dependencies of target png2format >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f src/formats/CMakeFiles/png2format.dir/build.make src/formats/CMakeFiles/png2format.dir/build >[ 64%] make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >Building CXX object src/formats/CMakeFiles/pdbqtformat.dir/pdbqtformat.o >[ 64%] cd /builddir/build/BUILD/openbabel-2.3.2/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dpdbqtformat_EXPORTS -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -o CMakeFiles/pdbqtformat.dir/pdbqtformat.o -c /builddir/build/BUILD/openbabel-2.3.2/src/formats/pdbqtformat.cpp >Building CXX object src/formats/CMakeFiles/png2format.dir/png2format.o >cd /builddir/build/BUILD/openbabel-2.3.2/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dpng2format_EXPORTS -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -o CMakeFiles/png2format.dir/png2format.o -c /builddir/build/BUILD/openbabel-2.3.2/src/formats/png2format.cpp >/builddir/build/BUILD/openbabel-2.3.2/src/formats/png2format.cpp: In member function 'virtual bool OpenBabel::PNG2Format::WriteChemObject(OpenBabel::OBConversion*)': >/builddir/build/BUILD/openbabel-2.3.2/src/formats/png2format.cpp:102:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] > bool nomore = _nmax && (_objects.size()==_nmax); > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/formats/png2format.cpp:109:31: warning: suggest parentheses around '&&' within '||' [-Wparentheses] > (!_nrows && !_ncols) && nmols==1)//if neither is specified and there is one output molecule > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/formats/png2format.cpp:132:23: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] > pConv->SetLast(n==_objects.size()); > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/formats/pdbqtformat.cpp: In function 'bool OpenBabel::OutputTree(OpenBabel::OBMol&, std::ostream&, std::map<unsigned int, OpenBabel::branch>&, unsigned int, bool, bool)': >/builddir/build/BUILD/openbabel-2.3.2/src/formats/pdbqtformat.cpp:567:20: warning: unused variable 'child' [-Wunused-variable] > unsigned int child=i; > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/formats/pdbqtformat.cpp: In function 'bool OpenBabel::Separate_preserve_charges(OpenBabel::OBMol&, std::vector<OpenBabel::OBMol>&)': >/builddir/build/BUILD/openbabel-2.3.2/src/formats/pdbqtformat.cpp:733:9: warning: unused variable 'fragments' [-Wunused-variable] > int fragments = 0; > ^ >Linking CXX shared module ../../lib/pcmodelformat.so >cd /builddir/build/BUILD/openbabel-2.3.2/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/pcmodelformat.dir/link.txt --verbose=1 >/usr/bin/c++ -fPIC -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -Wl,-soname,pcmodelformat.so -o ../../lib/pcmodelformat.so CMakeFiles/pcmodelformat.dir/pcmodelformat.o -lm -ldl -lz -lcairo -linchi -lm ../../lib/libopenbabel.so.4.0.2 -lm -ldl -lz >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 64%] Built target pcmodelformat >make -f src/formats/CMakeFiles/pngformat.dir/build.make src/formats/CMakeFiles/pngformat.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/pngformat.dir/DependInfo.cmake --color= >Dependee "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/pngformat.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/pngformat.dir/depend.internal". >Dependee "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/pngformat.dir/depend.internal". >Scanning dependencies of target pngformat >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f src/formats/CMakeFiles/pngformat.dir/build.make src/formats/CMakeFiles/pngformat.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles 72 >[ 65%] Building CXX object src/formats/CMakeFiles/pngformat.dir/pngformat.o >cd /builddir/build/BUILD/openbabel-2.3.2/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dpngformat_EXPORTS -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -o CMakeFiles/pngformat.dir/pngformat.o -c /builddir/build/BUILD/openbabel-2.3.2/src/formats/pngformat.cpp >/builddir/build/BUILD/openbabel-2.3.2/src/formats/pngformat.cpp: In member function 'virtual bool OpenBabel::PNGFormat::ReadMolecule(OpenBabel::OBBase*, OpenBabel::OBConversion*)': >/builddir/build/BUILD/openbabel-2.3.2/src/formats/pngformat.cpp:211:56: warning: narrowing conversion of '-119' from 'int' to 'const char' inside { } is ill-formed in C++11 [-Wnarrowing] > const char pngheader[] = {-119,80,78,71,13,10,26,10,0}; > ^ >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 65%] Building CXX object src/formats/CMakeFiles/png2format.dir/__/depict/cairopainter.o >cd /builddir/build/BUILD/openbabel-2.3.2/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dpng2format_EXPORTS -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -o CMakeFiles/png2format.dir/__/depict/cairopainter.o -c /builddir/build/BUILD/openbabel-2.3.2/src/depict/cairopainter.cpp >Linking CXX shared module ../../lib/png2format.so >cd /builddir/build/BUILD/openbabel-2.3.2/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/png2format.dir/link.txt --verbose=1 >/usr/bin/c++ -fPIC -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -Wl,-soname,png2format.so -o ../../lib/png2format.so CMakeFiles/png2format.dir/png2format.o CMakeFiles/png2format.dir/__/depict/cairopainter.o -lm -ldl -lz -lcairo -linchi -lm ../../lib/libopenbabel.so.4.0.2 -lm -ldl -lz >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 65%] Built target png2format >make -f src/formats/CMakeFiles/posformat.dir/build.make src/formats/CMakeFiles/posformat.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/posformat.dir/DependInfo.cmake --color= >Dependee "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/posformat.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/posformat.dir/depend.internal". >Dependee "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/posformat.dir/depend.internal". >Scanning dependencies of target posformat >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f src/formats/CMakeFiles/posformat.dir/build.make src/formats/CMakeFiles/posformat.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 65%] Building CXX object src/formats/CMakeFiles/posformat.dir/posformat.o >cd /builddir/build/BUILD/openbabel-2.3.2/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dposformat_EXPORTS -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -o CMakeFiles/posformat.dir/posformat.o -c /builddir/build/BUILD/openbabel-2.3.2/src/formats/posformat.cpp >Linking CXX shared module ../../lib/pngformat.so >cd /builddir/build/BUILD/openbabel-2.3.2/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/pngformat.dir/link.txt --verbose=1 >/usr/bin/c++ -fPIC -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -Wl,-soname,pngformat.so -o ../../lib/pngformat.so CMakeFiles/pngformat.dir/pngformat.o -lm -ldl -lz -lcairo -linchi -lm ../../lib/libopenbabel.so.4.0.2 -lm -ldl -lz >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles 72 >[ 65%] Built target pngformat >make -f src/formats/CMakeFiles/povrayformat.dir/build.make src/formats/CMakeFiles/povrayformat.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/povrayformat.dir/DependInfo.cmake --color= >Dependee "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/povrayformat.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/povrayformat.dir/depend.internal". >Dependee "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/povrayformat.dir/depend.internal". >Scanning dependencies of target povrayformat >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f src/formats/CMakeFiles/povrayformat.dir/build.make src/formats/CMakeFiles/povrayformat.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 65%] Building CXX object src/formats/CMakeFiles/povrayformat.dir/povrayformat.o >cd /builddir/build/BUILD/openbabel-2.3.2/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dpovrayformat_EXPORTS -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -o CMakeFiles/povrayformat.dir/povrayformat.o -c /builddir/build/BUILD/openbabel-2.3.2/src/formats/povrayformat.cpp >/builddir/build/BUILD/openbabel-2.3.2/src/formats/povrayformat.cpp: In member function 'void OpenBabel::PovrayFormat::OutputHeader(std::ostream&, OpenBabel::OBMol&, std::string)': >/builddir/build/BUILD/openbabel-2.3.2/src/formats/povrayformat.cpp:167:12: warning: variable 'time_res' set but not used [-Wunused-but-set-variable] > size_t time_res; /* Result of strftime */ > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/formats/povrayformat.cpp: In member function 'virtual bool OpenBabel::PovrayFormat::WriteMolecule(OpenBabel::OBBase*, OpenBabel::OBConversion*)': >/builddir/build/BUILD/openbabel-2.3.2/src/formats/povrayformat.cpp:801:17: warning: unused variable 'title' [-Wunused-variable] > const char* title = pmol->GetTitle(); > ^ >Linking CXX shared module ../../lib/pdbformat.so >cd /builddir/build/BUILD/openbabel-2.3.2/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/pdbformat.dir/link.txt --verbose=1 >/usr/bin/c++ -fPIC -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -Wl,-soname,pdbformat.so -o ../../lib/pdbformat.so CMakeFiles/pdbformat.dir/pdbformat.o -lm -ldl -lz -lcairo -linchi -lm ../../lib/libopenbabel.so.4.0.2 -lm -ldl -lz >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 65%] Built target pdbformat >make -f src/formats/CMakeFiles/pqrformat.dir/build.make src/formats/CMakeFiles/pqrformat.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/pqrformat.dir/DependInfo.cmake --color= >Dependee "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/pqrformat.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/pqrformat.dir/depend.internal". >Dependee "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/pqrformat.dir/depend.internal". >Scanning dependencies of target pqrformat >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f src/formats/CMakeFiles/pqrformat.dir/build.make src/formats/CMakeFiles/pqrformat.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles 73 >[ 66%] Building CXX object src/formats/CMakeFiles/pqrformat.dir/pqrformat.o >cd /builddir/build/BUILD/openbabel-2.3.2/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dpqrformat_EXPORTS -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -o CMakeFiles/pqrformat.dir/pqrformat.o -c /builddir/build/BUILD/openbabel-2.3.2/src/formats/pqrformat.cpp >Linking CXX shared module ../../lib/posformat.so >cd /builddir/build/BUILD/openbabel-2.3.2/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/posformat.dir/link.txt --verbose=1 >/usr/bin/c++ -fPIC -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -Wl,-soname,posformat.so -o ../../lib/posformat.so CMakeFiles/posformat.dir/posformat.o -lm -ldl -lz -lcairo -linchi -lm ../../lib/libopenbabel.so.4.0.2 -lm -ldl -lz >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 66%] Built target posformat >make -f src/formats/CMakeFiles/pubchem.dir/build.make src/formats/CMakeFiles/pubchem.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/pubchem.dir/DependInfo.cmake --color= >Dependee "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/pubchem.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/pubchem.dir/depend.internal". >Dependee "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/pubchem.dir/depend.internal". >Scanning dependencies of target pubchem >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f src/formats/CMakeFiles/pubchem.dir/build.make src/formats/CMakeFiles/pubchem.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 66%] Building CXX object src/formats/CMakeFiles/pubchem.dir/xml/pubchem.o >cd /builddir/build/BUILD/openbabel-2.3.2/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dpubchem_EXPORTS -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -o CMakeFiles/pubchem.dir/xml/pubchem.o -c /builddir/build/BUILD/openbabel-2.3.2/src/formats/xml/pubchem.cpp >/builddir/build/BUILD/openbabel-2.3.2/src/formats/pqrformat.cpp: In function 'double OpenBabel::parseAtomCharge(char*, OpenBabel::OBMol&)': >/builddir/build/BUILD/openbabel-2.3.2/src/formats/pqrformat.cpp:196:13: warning: unused variable 'atom' [-Wunused-variable] > OBAtom *atom = mol.GetAtom(mol.NumAtoms()); > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/formats/pqrformat.cpp: In function 'double OpenBabel::parseAtomRadius(char*, OpenBabel::OBMol&)': >/builddir/build/BUILD/openbabel-2.3.2/src/formats/pqrformat.cpp:211:13: warning: unused variable 'atom' [-Wunused-variable] > OBAtom *atom = mol.GetAtom(mol.NumAtoms()); > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/formats/pdbqtformat.cpp: At global scope: >/builddir/build/BUILD/openbabel-2.3.2/src/formats/pdbqtformat.cpp:686:16: warning: 'unsigned int OpenBabel::AtomsSoFar(const std::map<unsigned int, OpenBabel::branch>&, unsigned int)' defined but not used [-Wunused-function] > unsigned int AtomsSoFar(const map <unsigned int, branch> & tree, unsigned int depth) > ^ >Linking CXX shared module ../../lib/pdbqtformat.so >cd /builddir/build/BUILD/openbabel-2.3.2/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/pdbqtformat.dir/link.txt --verbose=1 >/usr/bin/c++ -fPIC -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -Wl,-soname,pdbqtformat.so -o ../../lib/pdbqtformat.so CMakeFiles/pdbqtformat.dir/pdbqtformat.o -lm -ldl -lz -lcairo -linchi -lm ../../lib/libopenbabel.so.4.0.2 -lm -ldl -lz >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 66%] make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles 58 >Building CXX object src/formats/CMakeFiles/pubchem.dir/xml/xml.o >cd /builddir/build/BUILD/openbabel-2.3.2/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dpubchem_EXPORTS -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -o CMakeFiles/pubchem.dir/xml/xml.o -c /builddir/build/BUILD/openbabel-2.3.2/src/formats/xml/xml.cpp >[ 66%] Built target pdbqtformat >make -f src/formats/CMakeFiles/pwscfformat.dir/build.make src/formats/CMakeFiles/pwscfformat.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/pwscfformat.dir/DependInfo.cmake --color= >Dependee "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/pwscfformat.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/pwscfformat.dir/depend.internal". >Dependee "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/pwscfformat.dir/depend.internal". >Scanning dependencies of target pwscfformat >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f src/formats/CMakeFiles/pwscfformat.dir/build.make src/formats/CMakeFiles/pwscfformat.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles 74 >[ 67%] Building CXX object src/formats/CMakeFiles/pwscfformat.dir/pwscfformat.o >cd /builddir/build/BUILD/openbabel-2.3.2/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dpwscfformat_EXPORTS -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -o CMakeFiles/pwscfformat.dir/pwscfformat.o -c /builddir/build/BUILD/openbabel-2.3.2/src/formats/pwscfformat.cpp >Linking CXX shared module ../../lib/povrayformat.so >cd /builddir/build/BUILD/openbabel-2.3.2/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/povrayformat.dir/link.txt --verbose=1 >/usr/bin/c++ -fPIC -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -Wl,-soname,povrayformat.so -o ../../lib/povrayformat.so CMakeFiles/povrayformat.dir/povrayformat.o -lm -ldl -lz -lcairo -linchi -lm ../../lib/libopenbabel.so.4.0.2 -lm -ldl -lz >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 67%] Built target povrayformat >make -f src/formats/CMakeFiles/qchemformat.dir/build.make src/formats/CMakeFiles/qchemformat.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/qchemformat.dir/DependInfo.cmake --color= >Dependee "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/qchemformat.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/qchemformat.dir/depend.internal". >Dependee "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/qchemformat.dir/depend.internal". >Scanning dependencies of target qchemformat >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f src/formats/CMakeFiles/qchemformat.dir/build.make src/formats/CMakeFiles/qchemformat.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 67%] Building CXX object src/formats/CMakeFiles/qchemformat.dir/qchemformat.o >cd /builddir/build/BUILD/openbabel-2.3.2/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dqchemformat_EXPORTS -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -o CMakeFiles/qchemformat.dir/qchemformat.o -c /builddir/build/BUILD/openbabel-2.3.2/src/formats/qchemformat.cpp >Linking CXX shared module ../../lib/pqrformat.so >cd /builddir/build/BUILD/openbabel-2.3.2/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/pqrformat.dir/link.txt --verbose=1 >/usr/bin/c++ -fPIC -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -Wl,-soname,pqrformat.so -o ../../lib/pqrformat.so CMakeFiles/pqrformat.dir/pqrformat.o -lm -ldl -lz -lcairo -linchi -lm ../../lib/libopenbabel.so.4.0.2 -lm -ldl -lz >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles 73 >[ 67%] Built target pqrformat >make -f src/formats/CMakeFiles/reportformat.dir/build.make src/formats/CMakeFiles/reportformat.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/reportformat.dir/DependInfo.cmake --color= >Dependee "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/reportformat.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/reportformat.dir/depend.internal". >Dependee "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/reportformat.dir/depend.internal". >Scanning dependencies of target reportformat >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f src/formats/CMakeFiles/reportformat.dir/build.make src/formats/CMakeFiles/reportformat.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 67%] Building CXX object src/formats/CMakeFiles/reportformat.dir/reportformat.o >cd /builddir/build/BUILD/openbabel-2.3.2/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dreportformat_EXPORTS -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -o CMakeFiles/reportformat.dir/reportformat.o -c /builddir/build/BUILD/openbabel-2.3.2/src/formats/reportformat.cpp >Linking CXX shared module ../../lib/pubchem.so >cd /builddir/build/BUILD/openbabel-2.3.2/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/pubchem.dir/link.txt --verbose=1 >/usr/bin/c++ -fPIC -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -Wl,-soname,pubchem.so -o ../../lib/pubchem.so CMakeFiles/pubchem.dir/xml/pubchem.o CMakeFiles/pubchem.dir/xml/xml.o -lm -ldl -lz -lcairo -linchi -lm -lxml2 ../../lib/libopenbabel.so.4.0.2 -lm -ldl -lz >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 67%] Built target pubchem >make -f src/formats/CMakeFiles/rsmiformat.dir/build.make src/formats/CMakeFiles/rsmiformat.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/rsmiformat.dir/DependInfo.cmake --color= >Dependee "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/rsmiformat.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/rsmiformat.dir/depend.internal". >Dependee "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/rsmiformat.dir/depend.internal". >Scanning dependencies of target rsmiformat >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f src/formats/CMakeFiles/rsmiformat.dir/build.make src/formats/CMakeFiles/rsmiformat.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 67%] Building CXX object src/formats/CMakeFiles/rsmiformat.dir/rsmiformat.o >cd /builddir/build/BUILD/openbabel-2.3.2/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Drsmiformat_EXPORTS -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -o CMakeFiles/rsmiformat.dir/rsmiformat.o -c /builddir/build/BUILD/openbabel-2.3.2/src/formats/rsmiformat.cpp >Linking CXX shared module ../../lib/pwscfformat.so >cd /builddir/build/BUILD/openbabel-2.3.2/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/pwscfformat.dir/link.txt --verbose=1 >/usr/bin/c++ -fPIC -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -Wl,-soname,pwscfformat.so -o ../../lib/pwscfformat.so CMakeFiles/pwscfformat.dir/pwscfformat.o -lm -ldl -lz -lcairo -linchi -lm ../../lib/libopenbabel.so.4.0.2 -lm -ldl -lz >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles 74 >[ 67%] Built target pwscfformat >make -f src/formats/CMakeFiles/rxnformat.dir/build.make src/formats/CMakeFiles/rxnformat.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/rxnformat.dir/DependInfo.cmake --color= >Dependee "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/rxnformat.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/rxnformat.dir/depend.internal". >Dependee "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/rxnformat.dir/depend.internal". >Scanning dependencies of target rxnformat >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f src/formats/CMakeFiles/rxnformat.dir/build.make src/formats/CMakeFiles/rxnformat.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 67%] Building CXX object src/formats/CMakeFiles/rxnformat.dir/rxnformat.o >cd /builddir/build/BUILD/openbabel-2.3.2/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Drxnformat_EXPORTS -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -o CMakeFiles/rxnformat.dir/rxnformat.o -c /builddir/build/BUILD/openbabel-2.3.2/src/formats/rxnformat.cpp >/builddir/build/BUILD/openbabel-2.3.2/src/formats/rxnformat.cpp: In member function 'virtual bool OpenBabel::RXNFormat::WriteMolecule(OpenBabel::OBBase*, OpenBabel::OBConversion*)': >/builddir/build/BUILD/openbabel-2.3.2/src/formats/rxnformat.cpp:228:14: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] > for(i=0;i<pReact->NumReactants();i++) > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/formats/rxnformat.cpp:235:14: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] > for(i=0;i<pReact->NumProducts();i++) > ^ >Linking CXX shared module ../../lib/reportformat.so >cd /builddir/build/BUILD/openbabel-2.3.2/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/reportformat.dir/link.txt --verbose=1 >/usr/bin/c++ -fPIC -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -Wl,-soname,reportformat.so -o ../../lib/reportformat.so CMakeFiles/reportformat.dir/reportformat.o -lm -ldl -lz -lcairo -linchi -lm ../../lib/libopenbabel.so.4.0.2 -lm -ldl -lz >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 67%] Built target reportformat >make -f src/formats/CMakeFiles/shelxformat.dir/build.make src/formats/CMakeFiles/shelxformat.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/shelxformat.dir/DependInfo.cmake --color= >Dependee "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/shelxformat.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/shelxformat.dir/depend.internal". >Dependee "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/shelxformat.dir/depend.internal". >Scanning dependencies of target shelxformat >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f src/formats/CMakeFiles/shelxformat.dir/build.make src/formats/CMakeFiles/shelxformat.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles 76 >[ 68%] Building CXX object src/formats/CMakeFiles/shelxformat.dir/shelxformat.o >cd /builddir/build/BUILD/openbabel-2.3.2/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dshelxformat_EXPORTS -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -o CMakeFiles/shelxformat.dir/shelxformat.o -c /builddir/build/BUILD/openbabel-2.3.2/src/formats/shelxformat.cpp >Linking CXX shared module ../../lib/qchemformat.so >cd /builddir/build/BUILD/openbabel-2.3.2/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/qchemformat.dir/link.txt --verbose=1 >/usr/bin/c++ -fPIC -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -Wl,-soname,qchemformat.so -o ../../lib/qchemformat.so CMakeFiles/qchemformat.dir/qchemformat.o -lm -ldl -lz -lcairo -linchi -lm ../../lib/libopenbabel.so.4.0.2 -lm -ldl -lz >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 68%] Built target qchemformat >make -f src/formats/CMakeFiles/smilesformat.dir/build.make src/formats/CMakeFiles/smilesformat.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/smilesformat.dir/DependInfo.cmake --color= >Dependee "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/smilesformat.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/smilesformat.dir/depend.internal". >Dependee "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/smilesformat.dir/depend.internal". >Scanning dependencies of target smilesformat >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f src/formats/CMakeFiles/smilesformat.dir/build.make src/formats/CMakeFiles/smilesformat.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 68%] Building CXX object src/formats/CMakeFiles/smilesformat.dir/smilesformat.o >cd /builddir/build/BUILD/openbabel-2.3.2/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dsmilesformat_EXPORTS -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -o CMakeFiles/smilesformat.dir/smilesformat.o -c /builddir/build/BUILD/openbabel-2.3.2/src/formats/smilesformat.cpp >Linking CXX shared module ../../lib/rxnformat.so >cd /builddir/build/BUILD/openbabel-2.3.2/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/rxnformat.dir/link.txt --verbose=1 >/usr/bin/c++ -fPIC -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -Wl,-soname,rxnformat.so -o ../../lib/rxnformat.so CMakeFiles/rxnformat.dir/rxnformat.o -lm -ldl -lz -lcairo -linchi -lm ../../lib/libopenbabel.so.4.0.2 -lm -ldl -lz >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 68%] Built target rxnformat >make -f src/formats/CMakeFiles/svgformat.dir/build.make src/formats/CMakeFiles/svgformat.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/svgformat.dir/DependInfo.cmake --color= >Dependee "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/svgformat.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/svgformat.dir/depend.internal". >Dependee "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/svgformat.dir/depend.internal". >Scanning dependencies of target svgformat >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f src/formats/CMakeFiles/svgformat.dir/build.make src/formats/CMakeFiles/svgformat.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 68%] Building CXX object src/formats/CMakeFiles/svgformat.dir/svgformat.o >cd /builddir/build/BUILD/openbabel-2.3.2/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dsvgformat_EXPORTS -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -o CMakeFiles/svgformat.dir/svgformat.o -c /builddir/build/BUILD/openbabel-2.3.2/src/formats/svgformat.cpp >Linking CXX shared module ../../lib/rsmiformat.so >cd /builddir/build/BUILD/openbabel-2.3.2/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/rsmiformat.dir/link.txt --verbose=1 >/usr/bin/c++ -fPIC -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -Wl,-soname,rsmiformat.so -o ../../lib/rsmiformat.so CMakeFiles/rsmiformat.dir/rsmiformat.o -lm -ldl -lz -lcairo -linchi -lm ../../lib/libopenbabel.so.4.0.2 -lm -ldl -lz >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 68%] Built target rsmiformat >make -f src/formats/CMakeFiles/textformat.dir/build.make src/formats/CMakeFiles/textformat.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/textformat.dir/DependInfo.cmake --color= >Dependee "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/textformat.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/textformat.dir/depend.internal". >Dependee "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/textformat.dir/depend.internal". >Scanning dependencies of target textformat >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f src/formats/CMakeFiles/textformat.dir/build.make src/formats/CMakeFiles/textformat.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 68%] Building CXX object src/formats/CMakeFiles/textformat.dir/textformat.o >cd /builddir/build/BUILD/openbabel-2.3.2/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dtextformat_EXPORTS -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -o CMakeFiles/textformat.dir/textformat.o -c /builddir/build/BUILD/openbabel-2.3.2/src/formats/textformat.cpp >/builddir/build/BUILD/openbabel-2.3.2/src/formats/smilesformat.cpp: In member function 'bool OpenBabel::OBSmilesParser::ParseSmiles(OpenBabel::OBMol&)': >/builddir/build/BUILD/openbabel-2.3.2/src/formats/smilesformat.cpp:584:15: warning: variable 'atom' set but not used [-Wunused-but-set-variable] > OBAtom* atom; > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/formats/smilesformat.cpp: In member function 'std::vector<OpenBabel::OBBondClosureInfo> OpenBabel::OBMol2Cansmi::GetCanonClosureDigits(OpenBabel::OBAtom*, OpenBabel::OBBitVec&, std::vector<unsigned int>&)': >/builddir/build/BUILD/openbabel-2.3.2/src/formats/smilesformat.cpp:3471:11: warning: unused variable 'bo' [-Wunused-variable] > int bo = (bond1->IsAromatic())? 1 : bond1->GetBO(); // CJ: why was this line added? bo is never used? > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/formats/smilesformat.cpp: In member function 'void OpenBabel::OBMol2Cansmi::CreateFragCansmiString(OpenBabel::OBMol&, OpenBabel::OBBitVec&, bool, char*)': >/builddir/build/BUILD/openbabel-2.3.2/src/formats/smilesformat.cpp:3998:24: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] > for (int i=0; i<atom_order.size(); ++i) > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/formats/smilesformat.cpp:4004:24: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] > for (int i=0; i<canonical_order.size(); ++i) > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/formats/smilesformat.cpp:4107:23: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] > if (*can_iter <= mol.NumAtoms()) > ^ >Linking CXX shared module ../../lib/shelxformat.so >cd /builddir/build/BUILD/openbabel-2.3.2/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/shelxformat.dir/link.txt --verbose=1 >/usr/bin/c++ -fPIC -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -Wl,-soname,shelxformat.so -o ../../lib/shelxformat.so CMakeFiles/shelxformat.dir/shelxformat.o -lm -ldl -lz -lcairo -linchi -lm ../../lib/libopenbabel.so.4.0.2 -lm -ldl -lz >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles 76 >[ 68%] Built target shelxformat >make -f src/formats/CMakeFiles/thermoformat.dir/build.make src/formats/CMakeFiles/thermoformat.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/thermoformat.dir/DependInfo.cmake --color= >Dependee "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/thermoformat.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/thermoformat.dir/depend.internal". >Dependee "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/thermoformat.dir/depend.internal". >Scanning dependencies of target thermoformat >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f src/formats/CMakeFiles/thermoformat.dir/build.make src/formats/CMakeFiles/thermoformat.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles 95 >[ 69%] Building CXX object src/formats/CMakeFiles/thermoformat.dir/thermoformat.o >cd /builddir/build/BUILD/openbabel-2.3.2/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dthermoformat_EXPORTS -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -o CMakeFiles/thermoformat.dir/thermoformat.o -c /builddir/build/BUILD/openbabel-2.3.2/src/formats/thermoformat.cpp >/builddir/build/BUILD/openbabel-2.3.2/src/formats/svgformat.cpp: In member function 'virtual bool OpenBabel::SVGFormat::WriteChemObject(OpenBabel::OBConversion*)': >/builddir/build/BUILD/openbabel-2.3.2/src/formats/svgformat.cpp:226:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] > bool nomore = _nmax && (_objects.size()==_nmax); > ^ >Linking CXX shared module ../../lib/textformat.so >cd /builddir/build/BUILD/openbabel-2.3.2/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/textformat.dir/link.txt --verbose=1 >/usr/bin/c++ -fPIC -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -Wl,-soname,textformat.so -o ../../lib/textformat.so CMakeFiles/textformat.dir/textformat.o -lm -ldl -lz -lcairo -linchi -lm ../../lib/libopenbabel.so.4.0.2 -lm -ldl -lz >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 69%] Built target textformat >make -f src/formats/CMakeFiles/tinkerformat.dir/build.make src/formats/CMakeFiles/tinkerformat.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/tinkerformat.dir/DependInfo.cmake --color= >Dependee "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/tinkerformat.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/tinkerformat.dir/depend.internal". >Dependee "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/tinkerformat.dir/depend.internal". >Scanning dependencies of target tinkerformat >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f src/formats/CMakeFiles/tinkerformat.dir/build.make src/formats/CMakeFiles/tinkerformat.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 69%] Building CXX object src/formats/CMakeFiles/tinkerformat.dir/tinkerformat.o >cd /builddir/build/BUILD/openbabel-2.3.2/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dtinkerformat_EXPORTS -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -o CMakeFiles/tinkerformat.dir/tinkerformat.o -c /builddir/build/BUILD/openbabel-2.3.2/src/formats/tinkerformat.cpp >/builddir/build/BUILD/openbabel-2.3.2/src/formats/tinkerformat.cpp: In member function 'virtual bool OpenBabel::TinkerFormat::ReadMolecule(OpenBabel::OBBase*, OpenBabel::OBConversion*)': >/builddir/build/BUILD/openbabel-2.3.2/src/formats/tinkerformat.cpp:101:9: warning: unused variable 'atomicNum' [-Wunused-variable] > int atomicNum; > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/formats/tinkerformat.cpp: In function 'int OpenBabel::SetMM3Type(OpenBabel::OBAtom*)': >/builddir/build/BUILD/openbabel-2.3.2/src/formats/tinkerformat.cpp:220:17: warning: unused variable 'c' [-Wunused-variable] > OBAtom *b, *c; // neighbors > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/formats/tinkerformat.cpp:486:3: warning: control reaches end of non-void function [-Wreturn-type] > } > ^ >Linking CXX shared module ../../lib/svgformat.so >cd /builddir/build/BUILD/openbabel-2.3.2/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/svgformat.dir/link.txt --verbose=1 >/usr/bin/c++ -fPIC -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -Wl,-soname,svgformat.so -o ../../lib/svgformat.so CMakeFiles/svgformat.dir/svgformat.o -lm -ldl -lz -lcairo -linchi -lm ../../lib/libopenbabel.so.4.0.2 -lm -ldl -lz >Linking CXX shared module ../../lib/thermoformat.so >cd /builddir/build/BUILD/openbabel-2.3.2/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/thermoformat.dir/link.txt --verbose=1 >/usr/bin/c++ -fPIC -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -Wl,-soname,thermoformat.so -o ../../lib/thermoformat.so CMakeFiles/thermoformat.dir/thermoformat.o -lm -ldl -lz -lcairo -linchi -lm ../../lib/libopenbabel.so.4.0.2 -lm -ldl -lz >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 69%] Built target svgformat >make -f src/formats/CMakeFiles/titleformat.dir/build.make src/formats/CMakeFiles/titleformat.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/titleformat.dir/DependInfo.cmake --color= >Dependee "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/titleformat.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/titleformat.dir/depend.internal". >Dependee "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/titleformat.dir/depend.internal". >Scanning dependencies of target titleformat >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f src/formats/CMakeFiles/titleformat.dir/build.make src/formats/CMakeFiles/titleformat.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 69%] Building CXX object src/formats/CMakeFiles/titleformat.dir/titleformat.o >cd /builddir/build/BUILD/openbabel-2.3.2/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dtitleformat_EXPORTS -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -o CMakeFiles/titleformat.dir/titleformat.o -c /builddir/build/BUILD/openbabel-2.3.2/src/formats/titleformat.cpp >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles 95 >[ 69%] Built target thermoformat >make -f src/formats/CMakeFiles/turbomoleformat.dir/build.make src/formats/CMakeFiles/turbomoleformat.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/turbomoleformat.dir/DependInfo.cmake --color= >Dependee "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/turbomoleformat.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/turbomoleformat.dir/depend.internal". >Dependee "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/turbomoleformat.dir/depend.internal". >Scanning dependencies of target turbomoleformat >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f src/formats/CMakeFiles/turbomoleformat.dir/build.make src/formats/CMakeFiles/turbomoleformat.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles 96 >[ 70%] Building CXX object src/formats/CMakeFiles/turbomoleformat.dir/turbomoleformat.o >cd /builddir/build/BUILD/openbabel-2.3.2/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dturbomoleformat_EXPORTS -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -o CMakeFiles/turbomoleformat.dir/turbomoleformat.o -c /builddir/build/BUILD/openbabel-2.3.2/src/formats/turbomoleformat.cpp >Linking CXX shared module ../../lib/tinkerformat.so >cd /builddir/build/BUILD/openbabel-2.3.2/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/tinkerformat.dir/link.txt --verbose=1 >/usr/bin/c++ -fPIC -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -Wl,-soname,tinkerformat.so -o ../../lib/tinkerformat.so CMakeFiles/tinkerformat.dir/tinkerformat.o -lm -ldl -lz -lcairo -linchi -lm ../../lib/libopenbabel.so.4.0.2 -lm -ldl -lz >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 70%] Built target tinkerformat >make -f src/formats/CMakeFiles/unichemformat.dir/build.make src/formats/CMakeFiles/unichemformat.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/unichemformat.dir/DependInfo.cmake --color= >Dependee "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/unichemformat.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/unichemformat.dir/depend.internal". >Dependee "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/unichemformat.dir/depend.internal". >Scanning dependencies of target unichemformat >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f src/formats/CMakeFiles/unichemformat.dir/build.make src/formats/CMakeFiles/unichemformat.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 70%] Building CXX object src/formats/CMakeFiles/unichemformat.dir/unichemformat.o >cd /builddir/build/BUILD/openbabel-2.3.2/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dunichemformat_EXPORTS -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -o CMakeFiles/unichemformat.dir/unichemformat.o -c /builddir/build/BUILD/openbabel-2.3.2/src/formats/unichemformat.cpp >Linking CXX shared module ../../lib/titleformat.so >cd /builddir/build/BUILD/openbabel-2.3.2/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/titleformat.dir/link.txt --verbose=1 >/usr/bin/c++ -fPIC -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -Wl,-soname,titleformat.so -o ../../lib/titleformat.so CMakeFiles/titleformat.dir/titleformat.o -lm -ldl -lz -lcairo -linchi -lm ../../lib/libopenbabel.so.4.0.2 -lm -ldl -lz >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 70%] Built target titleformat >make -f src/formats/CMakeFiles/vaspformat.dir/build.make src/formats/CMakeFiles/vaspformat.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/vaspformat.dir/DependInfo.cmake --color= >Dependee "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/vaspformat.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/vaspformat.dir/depend.internal". >Dependee "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/vaspformat.dir/depend.internal". >Scanning dependencies of target vaspformat >Linking CXX shared module ../../lib/turbomoleformat.so >cd /builddir/build/BUILD/openbabel-2.3.2/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/turbomoleformat.dir/link.txt --verbose=1 >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f src/formats/CMakeFiles/vaspformat.dir/build.make src/formats/CMakeFiles/vaspformat.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >/usr/bin/c++ -fPIC -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -Wl,-soname,turbomoleformat.so -o ../../lib/turbomoleformat.so CMakeFiles/turbomoleformat.dir/turbomoleformat.o -lm -ldl -lz -lcairo -linchi -lm ../../lib/libopenbabel.so.4.0.2 -lm -ldl -lz >[ 70%] Building CXX object src/formats/CMakeFiles/vaspformat.dir/vaspformat.o >cd /builddir/build/BUILD/openbabel-2.3.2/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dvaspformat_EXPORTS -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -o CMakeFiles/vaspformat.dir/vaspformat.o -c /builddir/build/BUILD/openbabel-2.3.2/src/formats/vaspformat.cpp >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles 96 >[ 70%] Built target turbomoleformat >make -f src/formats/CMakeFiles/viewmolformat.dir/build.make src/formats/CMakeFiles/viewmolformat.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/viewmolformat.dir/DependInfo.cmake --color= >Dependee "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/viewmolformat.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/viewmolformat.dir/depend.internal". >Dependee "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/viewmolformat.dir/depend.internal". >Scanning dependencies of target viewmolformat >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f src/formats/CMakeFiles/viewmolformat.dir/build.make src/formats/CMakeFiles/viewmolformat.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles 97 >[ 71%] Building CXX object src/formats/CMakeFiles/viewmolformat.dir/viewmolformat.o >cd /builddir/build/BUILD/openbabel-2.3.2/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dviewmolformat_EXPORTS -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -o CMakeFiles/viewmolformat.dir/viewmolformat.o -c /builddir/build/BUILD/openbabel-2.3.2/src/formats/viewmolformat.cpp >Linking CXX shared module ../../lib/unichemformat.so >cd /builddir/build/BUILD/openbabel-2.3.2/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/unichemformat.dir/link.txt --verbose=1 >/usr/bin/c++ -fPIC -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -Wl,-soname,unichemformat.so -o ../../lib/unichemformat.so CMakeFiles/unichemformat.dir/unichemformat.o -lm -ldl -lz -lcairo -linchi -lm ../../lib/libopenbabel.so.4.0.2 -lm -ldl -lz >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 71%] Built target unichemformat >make -f src/formats/CMakeFiles/xedformat.dir/build.make src/formats/CMakeFiles/xedformat.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/xedformat.dir/DependInfo.cmake --color= >Dependee "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/xedformat.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/xedformat.dir/depend.internal". >Dependee "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/xedformat.dir/depend.internal". >Scanning dependencies of target xedformat >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f src/formats/CMakeFiles/xedformat.dir/build.make src/formats/CMakeFiles/xedformat.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 71%] Building CXX object src/formats/CMakeFiles/xedformat.dir/xedformat.o >cd /builddir/build/BUILD/openbabel-2.3.2/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dxedformat_EXPORTS -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -o CMakeFiles/xedformat.dir/xedformat.o -c /builddir/build/BUILD/openbabel-2.3.2/src/formats/xedformat.cpp >/builddir/build/BUILD/openbabel-2.3.2/src/formats/vaspformat.cpp: In member function 'virtual bool OpenBabel::VASPFormat::ReadMolecule(OpenBabel::OBBase*, OpenBabel::OBConversion*)': >/builddir/build/BUILD/openbabel-2.3.2/src/formats/vaspformat.cpp:399:17: warning: unused variable 'freqnum' [-Wunused-variable] > int freqnum = atoi(vs[0].c_str()); > ^ >Linking CXX shared module ../../lib/viewmolformat.so >cd /builddir/build/BUILD/openbabel-2.3.2/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/viewmolformat.dir/link.txt --verbose=1 >/usr/bin/c++ -fPIC -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -Wl,-soname,viewmolformat.so -o ../../lib/viewmolformat.so CMakeFiles/viewmolformat.dir/viewmolformat.o -lm -ldl -lz -lcairo -linchi -lm ../../lib/libopenbabel.so.4.0.2 -lm -ldl -lz >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles 97 >[ 71%] Built target viewmolformat >make -f src/formats/CMakeFiles/xmlformat.dir/build.make src/formats/CMakeFiles/xmlformat.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/xmlformat.dir/DependInfo.cmake --color= >Linking CXX shared module ../../lib/xedformat.so >cd /builddir/build/BUILD/openbabel-2.3.2/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/xedformat.dir/link.txt --verbose=1 >Dependee "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/xmlformat.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/xmlformat.dir/depend.internal". >Dependee "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/xmlformat.dir/depend.internal". >/usr/bin/c++ -fPIC -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -Wl,-soname,xedformat.so -o ../../lib/xedformat.so CMakeFiles/xedformat.dir/xedformat.o -lm -ldl -lz -lcairo -linchi -lm ../../lib/libopenbabel.so.4.0.2 -lm -ldl -lz >Scanning dependencies of target xmlformat >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f src/formats/CMakeFiles/xmlformat.dir/build.make src/formats/CMakeFiles/xmlformat.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 71%] Building CXX object src/formats/CMakeFiles/xmlformat.dir/xml/xmlformat.o >cd /builddir/build/BUILD/openbabel-2.3.2/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dxmlformat_EXPORTS -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -o CMakeFiles/xmlformat.dir/xml/xmlformat.o -c /builddir/build/BUILD/openbabel-2.3.2/src/formats/xml/xmlformat.cpp >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 71%] Built target xedformat >make -f src/formats/CMakeFiles/xsfformat.dir/build.make src/formats/CMakeFiles/xsfformat.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/xsfformat.dir/DependInfo.cmake --color= >Dependee "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/xsfformat.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/xsfformat.dir/depend.internal". >Dependee "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/xsfformat.dir/depend.internal". >Scanning dependencies of target xsfformat >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f src/formats/CMakeFiles/xsfformat.dir/build.make src/formats/CMakeFiles/xsfformat.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 71%] Building CXX object src/formats/CMakeFiles/xsfformat.dir/xsfformat.o >cd /builddir/build/BUILD/openbabel-2.3.2/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dxsfformat_EXPORTS -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -o CMakeFiles/xsfformat.dir/xsfformat.o -c /builddir/build/BUILD/openbabel-2.3.2/src/formats/xsfformat.cpp >/builddir/build/BUILD/openbabel-2.3.2/src/formats/vaspformat.cpp:362:62: warning: 'fermi' may be used uninitialized in this function [-Wmaybe-uninitialized] > dos->SetData(fermi, energies, densities, integration); > ^ >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles 98 >[ 72%] Building CXX object src/formats/CMakeFiles/xmlformat.dir/xml/xml.o >cd /builddir/build/BUILD/openbabel-2.3.2/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dxmlformat_EXPORTS -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -o CMakeFiles/xmlformat.dir/xml/xml.o -c /builddir/build/BUILD/openbabel-2.3.2/src/formats/xml/xml.cpp >Linking CXX shared module ../../lib/xsfformat.so >cd /builddir/build/BUILD/openbabel-2.3.2/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/xsfformat.dir/link.txt --verbose=1 >/usr/bin/c++ -fPIC -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -Wl,-soname,xsfformat.so -o ../../lib/xsfformat.so CMakeFiles/xsfformat.dir/xsfformat.o -lm -ldl -lz -lcairo -linchi -lm ../../lib/libopenbabel.so.4.0.2 -lm -ldl -lz >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 72%] Built target xsfformat >make -f src/formats/CMakeFiles/xtcformat.dir/build.make src/formats/CMakeFiles/xtcformat.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/xtcformat.dir/DependInfo.cmake --color= >Dependee "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/xtcformat.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/xtcformat.dir/depend.internal". >Dependee "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/xtcformat.dir/depend.internal". >Scanning dependencies of target xtcformat >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f src/formats/CMakeFiles/xtcformat.dir/build.make src/formats/CMakeFiles/xtcformat.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 72%] Building CXX object src/formats/CMakeFiles/xtcformat.dir/xtcformat.o >cd /builddir/build/BUILD/openbabel-2.3.2/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dxtcformat_EXPORTS -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -o CMakeFiles/xtcformat.dir/xtcformat.o -c /builddir/build/BUILD/openbabel-2.3.2/src/formats/xtcformat.cpp >Linking CXX shared module ../../lib/vaspformat.so >cd /builddir/build/BUILD/openbabel-2.3.2/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/vaspformat.dir/link.txt --verbose=1 >/usr/bin/c++ -fPIC -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -Wl,-soname,vaspformat.so -o ../../lib/vaspformat.so CMakeFiles/vaspformat.dir/vaspformat.o -lm -ldl -lz -lcairo -linchi -lm ../../lib/libopenbabel.so.4.0.2 -lm -ldl -lz >/builddir/build/BUILD/openbabel-2.3.2/src/formats/xtcformat.cpp: In member function 'virtual bool OpenBabel::XTCFormat::ReadMolecule(OpenBabel::OBBase*, OpenBabel::OBConversion*)': >/builddir/build/BUILD/openbabel-2.3.2/src/formats/xtcformat.cpp:152:18: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] > if (natoms != mol.NumAtoms()) { > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/formats/xtcformat.cpp: In member function 'int OpenBabel::XTCFormat::sizeofint(int)': >/builddir/build/BUILD/openbabel-2.3.2/src/formats/xtcformat.cpp:395:17: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] > while (size >= num && num_of_bits < 32) { > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/formats/xtcformat.cpp: In member function 'int OpenBabel::XTCFormat::sizeofints(int, unsigned int*)': >/builddir/build/BUILD/openbabel-2.3.2/src/formats/xtcformat.cpp:435:32: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] > while (bytes[num_of_bytes] >= num) { > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/formats/xtcformat.cpp: In member function 'void OpenBabel::XTCFormat::sendints(int*, int, int, unsigned int*, unsigned int*)': >/builddir/build/BUILD/openbabel-2.3.2/src/formats/xtcformat.cpp:490:21: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] > if (num_of_bits >= num_of_bytes * 8) { > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/formats/xtcformat.cpp:491:21: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] > for (i = 0; i < num_of_bytes; i++) { > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/formats/xtcformat.cpp:496:21: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] > for (i = 0; i < num_of_bytes-1; i++) { > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/formats/xtcformat.cpp: In member function 'int OpenBabel::XTCFormat::receivebits(int*, int)': >/builddir/build/BUILD/openbabel-2.3.2/src/formats/xtcformat.cpp:531:20: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] > if (lastbits < num_of_bits) { > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/formats/xtcformat.cpp: In member function 'int OpenBabel::XTCFormat::xdr3dfcoord(XDR*, float*, int*, float*)': >/builddir/build/BUILD/openbabel-2.3.2/src/formats/xtcformat.cpp:772:23: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] > while (smallidx < LASTIDX && magicints[smallidx] < mindiff) { > ^ >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 72%] Built target vaspformat >make -f src/formats/CMakeFiles/xyzformat.dir/build.make src/formats/CMakeFiles/xyzformat.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/xyzformat.dir/DependInfo.cmake --color= >Dependee "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/xyzformat.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/xyzformat.dir/depend.internal". >Dependee "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/xyzformat.dir/depend.internal". >Scanning dependencies of target xyzformat >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f src/formats/CMakeFiles/xyzformat.dir/build.make src/formats/CMakeFiles/xyzformat.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles 99 >[ 73%] Building CXX object src/formats/CMakeFiles/xyzformat.dir/xyzformat.o >cd /builddir/build/BUILD/openbabel-2.3.2/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dxyzformat_EXPORTS -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -o CMakeFiles/xyzformat.dir/xyzformat.o -c /builddir/build/BUILD/openbabel-2.3.2/src/formats/xyzformat.cpp >Linking CXX shared module ../../lib/xmlformat.so >cd /builddir/build/BUILD/openbabel-2.3.2/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/xmlformat.dir/link.txt --verbose=1 >/usr/bin/c++ -fPIC -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -Wl,-soname,xmlformat.so -o ../../lib/xmlformat.so CMakeFiles/xmlformat.dir/xml/xmlformat.o CMakeFiles/xmlformat.dir/xml/xml.o -lm -ldl -lz -lcairo -linchi -lm -lxml2 ../../lib/libopenbabel.so.4.0.2 -lm -ldl -lz >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles 98 >[ 73%] Built target xmlformat >make -f src/formats/CMakeFiles/yasaraformat.dir/build.make src/formats/CMakeFiles/yasaraformat.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/yasaraformat.dir/DependInfo.cmake --color= >Dependee "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/yasaraformat.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/yasaraformat.dir/depend.internal". >Dependee "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/yasaraformat.dir/depend.internal". >Scanning dependencies of target yasaraformat >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f src/formats/CMakeFiles/yasaraformat.dir/build.make src/formats/CMakeFiles/yasaraformat.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 73%] Building CXX object src/formats/CMakeFiles/yasaraformat.dir/yasaraformat.o >cd /builddir/build/BUILD/openbabel-2.3.2/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dyasaraformat_EXPORTS -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -o CMakeFiles/yasaraformat.dir/yasaraformat.o -c /builddir/build/BUILD/openbabel-2.3.2/src/formats/yasaraformat.cpp >/builddir/build/BUILD/openbabel-2.3.2/src/formats/xtcformat.cpp:957:33: warning: array subscript is above array bounds [-Warray-bounds] > larger = magicints[maxidx]; > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/formats/xtcformat.cpp:978:56: warning: 'bitsizeint[2]' may be used uninitialized in this function [-Wmaybe-uninitialized] > thiscoord[2] = receivebits(buf, bitsizeint[2]); > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/formats/xtcformat.cpp:977:56: warning: 'bitsizeint[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] > thiscoord[1] = receivebits(buf, bitsizeint[1]); > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/formats/xtcformat.cpp:976:56: warning: 'bitsizeint[0]' may be used uninitialized in this function [-Wmaybe-uninitialized] > thiscoord[0] = receivebits(buf, bitsizeint[0]); > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/formats/xtcformat.cpp:789:30: warning: 'prevcoord[2]' may be used uninitialized in this function [-Wmaybe-uninitialized] > abs(thiscoord[2] - prevcoord[2]) < larger) { > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/formats/xtcformat.cpp:788:30: warning: 'prevcoord[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] > abs(thiscoord[1] - prevcoord[1]) < larger && > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/formats/xtcformat.cpp:787:30: warning: 'prevcoord[0]' may be used uninitialized in this function [-Wmaybe-uninitialized] > abs(thiscoord[0] - prevcoord[0]) < larger && > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/formats/yasaraformat.cpp: In function 'void OpenBabel::mob_getid(OpenBabel::atomid*, OpenBabel::mobatom*)': >/builddir/build/BUILD/openbabel-2.3.2/src/formats/yasaraformat.cpp:243:74: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] > if (flags&MOB_OCCUPANCYFLAG) id->occupancy=((float*)atom->link)[idpos++]; > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/formats/yasaraformat.cpp:245:70: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] > if (flags&MOB_TEMPFACFLAG) id->bfactor=((float*)atom->link)[idpos++]; > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/formats/yasaraformat.cpp:249:72: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] > if (flags&MOB_PROPERTYFLAG) id->property=((float*)atom->link)[idpos++]; > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/formats/yasaraformat.cpp: In member function 'virtual bool OpenBabel::YOBFormat::ReadMolecule(OpenBabel::OBBase*, OpenBabel::OBConversion*)': >/builddir/build/BUILD/openbabel-2.3.2/src/formats/yasaraformat.cpp:411:24: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] > *((int32*)resname)=id.resnamechain; > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/formats/yasaraformat.cpp:429:23: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] > *((int32*)atomname)=id.atom; > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/formats/yasaraformat.cpp:368:21: warning: variable 'reslen' set but not used [-Wunused-but-set-variable] > int /*samenames,*/reslen,charged; > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/formats/yasaraformat.cpp: In member function 'virtual bool OpenBabel::YOBFormat::WriteMolecule(OpenBabel::OBBase*, OpenBabel::OBConversion*)': >/builddir/build/BUILD/openbabel-2.3.2/src/formats/yasaraformat.cpp:480:40: warning: narrowing conversion of '-16' from 'int' to 'char' inside { } is ill-formed in C++11 [-Wnarrowing] > char double1[8]={0,0,0,0,0,0,-16,0x3f}; > ^ >Linking CXX shared module ../../lib/smilesformat.so >cd /builddir/build/BUILD/openbabel-2.3.2/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/smilesformat.dir/link.txt --verbose=1 >/usr/bin/c++ -fPIC -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -Wl,-soname,smilesformat.so -o ../../lib/smilesformat.so CMakeFiles/smilesformat.dir/smilesformat.o -lm -ldl -lz -lcairo -linchi -lm ../../lib/libopenbabel.so.4.0.2 -lm -ldl -lz >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 73%] Built target smilesformat >make -f src/formats/CMakeFiles/zindoformat.dir/build.make src/formats/CMakeFiles/zindoformat.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/zindoformat.dir/DependInfo.cmake --color= >Dependee "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/zindoformat.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/zindoformat.dir/depend.internal". >Dependee "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/zindoformat.dir/depend.internal". >Scanning dependencies of target zindoformat >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f src/formats/CMakeFiles/zindoformat.dir/build.make src/formats/CMakeFiles/zindoformat.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles 100 >[ 74%] Building CXX object src/formats/CMakeFiles/zindoformat.dir/zindoformat.o >cd /builddir/build/BUILD/openbabel-2.3.2/src/formats && /usr/bin/c++ -DBUILD_LINK_AS_DLL -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dzindoformat_EXPORTS -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -I/usr/include/cairo -I/usr/include/inchi -I/usr/include/libxml2 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -o CMakeFiles/zindoformat.dir/zindoformat.o -c /builddir/build/BUILD/openbabel-2.3.2/src/formats/zindoformat.cpp >Linking CXX shared module ../../lib/xtcformat.so >cd /builddir/build/BUILD/openbabel-2.3.2/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/xtcformat.dir/link.txt --verbose=1 >/usr/bin/c++ -fPIC -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -Wl,-soname,xtcformat.so -o ../../lib/xtcformat.so CMakeFiles/xtcformat.dir/xtcformat.o -lm -ldl -lz -lcairo -linchi -lm ../../lib/libopenbabel.so.4.0.2 -lm -ldl -lz >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 74%] Built target xtcformat >make -f tools/CMakeFiles/babel.dir/build.make tools/CMakeFiles/babel.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/tools /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/tools /builddir/build/BUILD/openbabel-2.3.2/tools/CMakeFiles/babel.dir/DependInfo.cmake --color= >Dependee "/builddir/build/BUILD/openbabel-2.3.2/tools/CMakeFiles/babel.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/tools/CMakeFiles/babel.dir/depend.internal". >Dependee "/builddir/build/BUILD/openbabel-2.3.2/tools/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/tools/CMakeFiles/babel.dir/depend.internal". >Scanning dependencies of target babel >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f tools/CMakeFiles/babel.dir/build.make tools/CMakeFiles/babel.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 74%] Building CXX object tools/CMakeFiles/babel.dir/babel.o >cd /builddir/build/BUILD/openbabel-2.3.2/tools && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -o CMakeFiles/babel.dir/babel.o -c /builddir/build/BUILD/openbabel-2.3.2/tools/babel.cpp >Linking CXX shared module ../../lib/yasaraformat.so >cd /builddir/build/BUILD/openbabel-2.3.2/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/yasaraformat.dir/link.txt --verbose=1 >/usr/bin/c++ -fPIC -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -Wl,-soname,yasaraformat.so -o ../../lib/yasaraformat.so CMakeFiles/yasaraformat.dir/yasaraformat.o -lm -ldl -lz -lcairo -linchi -lm ../../lib/libopenbabel.so.4.0.2 -lm -ldl -lz >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 74%] Built target yasaraformat >make -f tools/CMakeFiles/obabel.dir/build.make tools/CMakeFiles/obabel.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/tools /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/tools /builddir/build/BUILD/openbabel-2.3.2/tools/CMakeFiles/obabel.dir/DependInfo.cmake --color= >Dependee "/builddir/build/BUILD/openbabel-2.3.2/tools/CMakeFiles/obabel.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/tools/CMakeFiles/obabel.dir/depend.internal". >Dependee "/builddir/build/BUILD/openbabel-2.3.2/tools/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/tools/CMakeFiles/obabel.dir/depend.internal". >Scanning dependencies of target obabel >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f tools/CMakeFiles/obabel.dir/build.make tools/CMakeFiles/obabel.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 74%] Building CXX object tools/CMakeFiles/obabel.dir/obabel.o >cd /builddir/build/BUILD/openbabel-2.3.2/tools && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -o CMakeFiles/obabel.dir/obabel.o -c /builddir/build/BUILD/openbabel-2.3.2/tools/obabel.cpp >Linking CXX shared module ../../lib/xyzformat.so >cd /builddir/build/BUILD/openbabel-2.3.2/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/xyzformat.dir/link.txt --verbose=1 >/usr/bin/c++ -fPIC -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -Wl,-soname,xyzformat.so -o ../../lib/xyzformat.so CMakeFiles/xyzformat.dir/xyzformat.o -lm -ldl -lz -lcairo -linchi -lm ../../lib/libopenbabel.so.4.0.2 -lm -ldl -lz >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles 99 >[ 74%] Built target xyzformat >make -f tools/CMakeFiles/obchiral.dir/build.make tools/CMakeFiles/obchiral.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/tools /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/tools /builddir/build/BUILD/openbabel-2.3.2/tools/CMakeFiles/obchiral.dir/DependInfo.cmake --color= >Dependee "/builddir/build/BUILD/openbabel-2.3.2/tools/CMakeFiles/obchiral.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/tools/CMakeFiles/obchiral.dir/depend.internal". >Dependee "/builddir/build/BUILD/openbabel-2.3.2/tools/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/tools/CMakeFiles/obchiral.dir/depend.internal". >Scanning dependencies of target obchiral >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f tools/CMakeFiles/obchiral.dir/build.make tools/CMakeFiles/obchiral.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 74%] Building CXX object tools/CMakeFiles/obchiral.dir/obchiral.o >cd /builddir/build/BUILD/openbabel-2.3.2/tools && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -o CMakeFiles/obchiral.dir/obchiral.o -c /builddir/build/BUILD/openbabel-2.3.2/tools/obchiral.cpp >Linking CXX executable ../bin/babel >cd /builddir/build/BUILD/openbabel-2.3.2/tools && /usr/bin/cmake -E cmake_link_script CMakeFiles/babel.dir/link.txt --verbose=1 >/usr/bin/c++ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro CMakeFiles/babel.dir/babel.o -o ../bin/babel -rdynamic ../lib/libopenbabel.so.4.0.2 -lm -ldl -lz >Linking CXX shared module ../../lib/zindoformat.so >cd /builddir/build/BUILD/openbabel-2.3.2/src/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/zindoformat.dir/link.txt --verbose=1 >/usr/bin/c++ -fPIC -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -Wl,-soname,zindoformat.so -o ../../lib/zindoformat.so CMakeFiles/zindoformat.dir/zindoformat.o -lm -ldl -lz -lcairo -linchi -lm ../../lib/libopenbabel.so.4.0.2 -lm -ldl -lz >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 74%] Built target babel >make -f tools/CMakeFiles/obconformer.dir/build.make tools/CMakeFiles/obconformer.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/tools /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/tools /builddir/build/BUILD/openbabel-2.3.2/tools/CMakeFiles/obconformer.dir/DependInfo.cmake --color= >Dependee "/builddir/build/BUILD/openbabel-2.3.2/tools/CMakeFiles/obconformer.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/tools/CMakeFiles/obconformer.dir/depend.internal". >Dependee "/builddir/build/BUILD/openbabel-2.3.2/tools/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/tools/CMakeFiles/obconformer.dir/depend.internal". >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles 100 >Scanning dependencies of target obconformer >[ 74%] Built target zindoformat >make -f tools/CMakeFiles/obenergy.dir/build.make tools/CMakeFiles/obenergy.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/tools /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/tools /builddir/build/BUILD/openbabel-2.3.2/tools/CMakeFiles/obenergy.dir/DependInfo.cmake --color= >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f tools/CMakeFiles/obconformer.dir/build.make tools/CMakeFiles/obconformer.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles 29 >Dependee "/builddir/build/BUILD/openbabel-2.3.2/tools/CMakeFiles/obenergy.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/tools/CMakeFiles/obenergy.dir/depend.internal". >Dependee "/builddir/build/BUILD/openbabel-2.3.2/tools/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/tools/CMakeFiles/obenergy.dir/depend.internal". >[ 75%] Building CXX object tools/CMakeFiles/obconformer.dir/obconformer.o >cd /builddir/build/BUILD/openbabel-2.3.2/tools && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -o CMakeFiles/obconformer.dir/obconformer.o -c /builddir/build/BUILD/openbabel-2.3.2/tools/obconformer.cpp >Scanning dependencies of target obenergy >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f tools/CMakeFiles/obenergy.dir/build.make tools/CMakeFiles/obenergy.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 75%] Building CXX object tools/CMakeFiles/obenergy.dir/obenergy.o >cd /builddir/build/BUILD/openbabel-2.3.2/tools && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -o CMakeFiles/obenergy.dir/obenergy.o -c /builddir/build/BUILD/openbabel-2.3.2/tools/obenergy.cpp >Linking CXX executable ../bin/obabel >cd /builddir/build/BUILD/openbabel-2.3.2/tools && /usr/bin/cmake -E cmake_link_script CMakeFiles/obabel.dir/link.txt --verbose=1 >/usr/bin/c++ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro CMakeFiles/obabel.dir/obabel.o -o ../bin/obabel -rdynamic ../lib/libopenbabel.so.4.0.2 -lm -ldl -lz >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 75%] Built target obabel >make -f tools/CMakeFiles/obfit.dir/build.make tools/CMakeFiles/obfit.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/tools /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/tools /builddir/build/BUILD/openbabel-2.3.2/tools/CMakeFiles/obfit.dir/DependInfo.cmake --color= >Dependee "/builddir/build/BUILD/openbabel-2.3.2/tools/CMakeFiles/obfit.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/tools/CMakeFiles/obfit.dir/depend.internal". >Dependee "/builddir/build/BUILD/openbabel-2.3.2/tools/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/tools/CMakeFiles/obfit.dir/depend.internal". >Scanning dependencies of target obfit >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f tools/CMakeFiles/obfit.dir/build.make tools/CMakeFiles/obfit.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles 30 >[ 76%] Building CXX object tools/CMakeFiles/obfit.dir/obfit.o >cd /builddir/build/BUILD/openbabel-2.3.2/tools && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -o CMakeFiles/obfit.dir/obfit.o -c /builddir/build/BUILD/openbabel-2.3.2/tools/obfit.cpp >Linking CXX executable ../bin/obchiral >cd /builddir/build/BUILD/openbabel-2.3.2/tools && /usr/bin/cmake -E cmake_link_script CMakeFiles/obchiral.dir/link.txt --verbose=1 >/usr/bin/c++ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro CMakeFiles/obchiral.dir/obchiral.o -o ../bin/obchiral -rdynamic ../lib/libopenbabel.so.4.0.2 -lm -ldl -lz >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 76%] Built target obchiral >make -f tools/CMakeFiles/obgen.dir/build.make tools/CMakeFiles/obgen.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/tools /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/tools /builddir/build/BUILD/openbabel-2.3.2/tools/CMakeFiles/obgen.dir/DependInfo.cmake --color= >Dependee "/builddir/build/BUILD/openbabel-2.3.2/tools/CMakeFiles/obgen.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/tools/CMakeFiles/obgen.dir/depend.internal". >Dependee "/builddir/build/BUILD/openbabel-2.3.2/tools/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/tools/CMakeFiles/obgen.dir/depend.internal". >Scanning dependencies of target obgen >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f tools/CMakeFiles/obgen.dir/build.make tools/CMakeFiles/obgen.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 76%] Building CXX object tools/CMakeFiles/obgen.dir/obgen.o >cd /builddir/build/BUILD/openbabel-2.3.2/tools && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -o CMakeFiles/obgen.dir/obgen.o -c /builddir/build/BUILD/openbabel-2.3.2/tools/obgen.cpp >Linking CXX executable ../bin/obconformer >cd /builddir/build/BUILD/openbabel-2.3.2/tools && /usr/bin/cmake -E cmake_link_script CMakeFiles/obconformer.dir/link.txt --verbose=1 >/usr/bin/c++ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro CMakeFiles/obconformer.dir/obconformer.o -o ../bin/obconformer -rdynamic ../lib/libopenbabel.so.4.0.2 -lm -ldl -lz >Linking CXX executable ../bin/obenergy >cd /builddir/build/BUILD/openbabel-2.3.2/tools && /usr/bin/cmake -E cmake_link_script CMakeFiles/obenergy.dir/link.txt --verbose=1 >/usr/bin/c++ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro CMakeFiles/obenergy.dir/obenergy.o -o ../bin/obenergy -rdynamic ../lib/libopenbabel.so.4.0.2 -lm -ldl -lz >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles 29 >[ 76%] Built target obconformer >make -f tools/CMakeFiles/obgrep.dir/build.make tools/CMakeFiles/obgrep.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/tools /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/tools /builddir/build/BUILD/openbabel-2.3.2/tools/CMakeFiles/obgrep.dir/DependInfo.cmake --color= >Dependee "/builddir/build/BUILD/openbabel-2.3.2/tools/CMakeFiles/obgrep.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/tools/CMakeFiles/obgrep.dir/depend.internal". >Dependee "/builddir/build/BUILD/openbabel-2.3.2/tools/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/tools/CMakeFiles/obgrep.dir/depend.internal". >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >Scanning dependencies of target obgrep >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f tools/CMakeFiles/obgrep.dir/build.make tools/CMakeFiles/obgrep.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 76%] Built target obenergy >make -f tools/CMakeFiles/obminimize.dir/build.make tools/CMakeFiles/obminimize.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/tools /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/tools /builddir/build/BUILD/openbabel-2.3.2/tools/CMakeFiles/obminimize.dir/DependInfo.cmake --color= >[ 76%] Dependee "/builddir/build/BUILD/openbabel-2.3.2/tools/CMakeFiles/obminimize.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/tools/CMakeFiles/obminimize.dir/depend.internal". >Dependee "/builddir/build/BUILD/openbabel-2.3.2/tools/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/tools/CMakeFiles/obminimize.dir/depend.internal". >Building CXX object tools/CMakeFiles/obgrep.dir/obgrep.o >cd /builddir/build/BUILD/openbabel-2.3.2/tools && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -o CMakeFiles/obgrep.dir/obgrep.o -c /builddir/build/BUILD/openbabel-2.3.2/tools/obgrep.cpp >Scanning dependencies of target obminimize >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f tools/CMakeFiles/obminimize.dir/build.make tools/CMakeFiles/obminimize.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles 32 >[ 77%] Building CXX object tools/CMakeFiles/obminimize.dir/obminimize.o >cd /builddir/build/BUILD/openbabel-2.3.2/tools && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -o CMakeFiles/obminimize.dir/obminimize.o -c /builddir/build/BUILD/openbabel-2.3.2/tools/obminimize.cpp >Linking CXX executable ../bin/obgen >cd /builddir/build/BUILD/openbabel-2.3.2/tools && /usr/bin/cmake -E cmake_link_script CMakeFiles/obgen.dir/link.txt --verbose=1 >/usr/bin/c++ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro CMakeFiles/obgen.dir/obgen.o -o ../bin/obgen -rdynamic ../lib/libopenbabel.so.4.0.2 -lm -ldl -lz >Linking CXX executable ../bin/obfit >cd /builddir/build/BUILD/openbabel-2.3.2/tools && /usr/bin/cmake -E cmake_link_script CMakeFiles/obfit.dir/link.txt --verbose=1 >/usr/bin/c++ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro CMakeFiles/obfit.dir/obfit.o -o ../bin/obfit -rdynamic ../lib/libopenbabel.so.4.0.2 -lm -ldl -lz >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 77%] Built target obgen >make -f tools/CMakeFiles/obprobe.dir/build.make tools/CMakeFiles/obprobe.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/tools /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/tools /builddir/build/BUILD/openbabel-2.3.2/tools/CMakeFiles/obprobe.dir/DependInfo.cmake --color= >Dependee "/builddir/build/BUILD/openbabel-2.3.2/tools/CMakeFiles/obprobe.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/tools/CMakeFiles/obprobe.dir/depend.internal". >Dependee "/builddir/build/BUILD/openbabel-2.3.2/tools/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/tools/CMakeFiles/obprobe.dir/depend.internal". >Scanning dependencies of target obprobe >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f tools/CMakeFiles/obprobe.dir/build.make tools/CMakeFiles/obprobe.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 77%] Building CXX object tools/CMakeFiles/obprobe.dir/obprobe.o >cd /builddir/build/BUILD/openbabel-2.3.2/tools && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -o CMakeFiles/obprobe.dir/obprobe.o -c /builddir/build/BUILD/openbabel-2.3.2/tools/obprobe.cpp >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles 30 >[ 77%] Built target obfit >make -f tools/CMakeFiles/obprop.dir/build.make tools/CMakeFiles/obprop.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/tools /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/tools /builddir/build/BUILD/openbabel-2.3.2/tools/CMakeFiles/obprop.dir/DependInfo.cmake --color= >Dependee "/builddir/build/BUILD/openbabel-2.3.2/tools/CMakeFiles/obprop.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/tools/CMakeFiles/obprop.dir/depend.internal". >Dependee "/builddir/build/BUILD/openbabel-2.3.2/tools/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/tools/CMakeFiles/obprop.dir/depend.internal". >Scanning dependencies of target obprop >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f tools/CMakeFiles/obprop.dir/build.make tools/CMakeFiles/obprop.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 77%] Building CXX object tools/CMakeFiles/obprop.dir/obprop.o >cd /builddir/build/BUILD/openbabel-2.3.2/tools && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -o CMakeFiles/obprop.dir/obprop.o -c /builddir/build/BUILD/openbabel-2.3.2/tools/obprop.cpp >Linking CXX executable ../bin/obgrep >cd /builddir/build/BUILD/openbabel-2.3.2/tools && /usr/bin/cmake -E cmake_link_script CMakeFiles/obgrep.dir/link.txt --verbose=1 >/usr/bin/c++ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro CMakeFiles/obgrep.dir/obgrep.o -o ../bin/obgrep -rdynamic ../lib/libopenbabel.so.4.0.2 -lm -ldl -lz >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 77%] Built target obgrep >make -f tools/CMakeFiles/obrms.dir/build.make tools/CMakeFiles/obrms.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/tools /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/tools /builddir/build/BUILD/openbabel-2.3.2/tools/CMakeFiles/obrms.dir/DependInfo.cmake --color= >Dependee "/builddir/build/BUILD/openbabel-2.3.2/tools/CMakeFiles/obrms.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/tools/CMakeFiles/obrms.dir/depend.internal". >Dependee "/builddir/build/BUILD/openbabel-2.3.2/tools/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/tools/CMakeFiles/obrms.dir/depend.internal". >Scanning dependencies of target obrms >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f tools/CMakeFiles/obrms.dir/build.make tools/CMakeFiles/obrms.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles 33 >[ 78%] Building CXX object tools/CMakeFiles/obrms.dir/obrms.o >cd /builddir/build/BUILD/openbabel-2.3.2/tools && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -o CMakeFiles/obrms.dir/obrms.o -c /builddir/build/BUILD/openbabel-2.3.2/tools/obrms.cpp >Linking CXX executable ../bin/obminimize >cd /builddir/build/BUILD/openbabel-2.3.2/tools && /usr/bin/cmake -E cmake_link_script CMakeFiles/obminimize.dir/link.txt --verbose=1 >/usr/bin/c++ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro CMakeFiles/obminimize.dir/obminimize.o -o ../bin/obminimize -rdynamic ../lib/libopenbabel.so.4.0.2 -lm -ldl -lz >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles 32 >[ 78%] Built target obminimize >make -f tools/CMakeFiles/obrotamer.dir/build.make tools/CMakeFiles/obrotamer.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/tools /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/tools /builddir/build/BUILD/openbabel-2.3.2/tools/CMakeFiles/obrotamer.dir/DependInfo.cmake --color= >Dependee "/builddir/build/BUILD/openbabel-2.3.2/tools/CMakeFiles/obrotamer.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/tools/CMakeFiles/obrotamer.dir/depend.internal". >Dependee "/builddir/build/BUILD/openbabel-2.3.2/tools/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/tools/CMakeFiles/obrotamer.dir/depend.internal". >Scanning dependencies of target obrotamer >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f tools/CMakeFiles/obrotamer.dir/build.make tools/CMakeFiles/obrotamer.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 78%] Building CXX object tools/CMakeFiles/obrotamer.dir/obrotamer.o >cd /builddir/build/BUILD/openbabel-2.3.2/tools && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -o CMakeFiles/obrotamer.dir/obrotamer.o -c /builddir/build/BUILD/openbabel-2.3.2/tools/obrotamer.cpp >Linking CXX executable ../bin/obprobe >cd /builddir/build/BUILD/openbabel-2.3.2/tools && /usr/bin/cmake -E cmake_link_script CMakeFiles/obprobe.dir/link.txt --verbose=1 >/usr/bin/c++ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro CMakeFiles/obprobe.dir/obprobe.o -o ../bin/obprobe -rdynamic ../lib/libopenbabel.so.4.0.2 -lm -ldl -lz >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 78%] Built target obprobe >make -f tools/CMakeFiles/obrotate.dir/build.make tools/CMakeFiles/obrotate.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/tools /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/tools /builddir/build/BUILD/openbabel-2.3.2/tools/CMakeFiles/obrotate.dir/DependInfo.cmake --color= >Dependee "/builddir/build/BUILD/openbabel-2.3.2/tools/CMakeFiles/obrotate.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/tools/CMakeFiles/obrotate.dir/depend.internal". >Dependee "/builddir/build/BUILD/openbabel-2.3.2/tools/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/tools/CMakeFiles/obrotate.dir/depend.internal". >Scanning dependencies of target obrotate >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f tools/CMakeFiles/obrotate.dir/build.make tools/CMakeFiles/obrotate.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 78%] Building CXX object tools/CMakeFiles/obrotate.dir/obrotate.o >cd /builddir/build/BUILD/openbabel-2.3.2/tools && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -o CMakeFiles/obrotate.dir/obrotate.o -c /builddir/build/BUILD/openbabel-2.3.2/tools/obrotate.cpp >Linking CXX executable ../bin/obrms >cd /builddir/build/BUILD/openbabel-2.3.2/tools && /usr/bin/cmake -E cmake_link_script CMakeFiles/obrms.dir/link.txt --verbose=1 >/usr/bin/c++ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro CMakeFiles/obrms.dir/obrms.o -o ../bin/obrms -rdynamic ../lib/libopenbabel.so.4.0.2 -lm -ldl -lz >Linking CXX executable ../bin/obprop >cd /builddir/build/BUILD/openbabel-2.3.2/tools && /usr/bin/cmake -E cmake_link_script CMakeFiles/obprop.dir/link.txt --verbose=1 >/usr/bin/c++ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro CMakeFiles/obprop.dir/obprop.o -o ../bin/obprop -rdynamic ../lib/libopenbabel.so.4.0.2 -lm -ldl -lz >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles 33 >[ 78%] Built target obrms >make -f tools/CMakeFiles/obspectrophore.dir/build.make tools/CMakeFiles/obspectrophore.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/tools /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/tools /builddir/build/BUILD/openbabel-2.3.2/tools/CMakeFiles/obspectrophore.dir/DependInfo.cmake --color= >Dependee "/builddir/build/BUILD/openbabel-2.3.2/tools/CMakeFiles/obspectrophore.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/tools/CMakeFiles/obspectrophore.dir/depend.internal". >Dependee "/builddir/build/BUILD/openbabel-2.3.2/tools/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/tools/CMakeFiles/obspectrophore.dir/depend.internal". >Scanning dependencies of target obspectrophore >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f tools/CMakeFiles/obspectrophore.dir/build.make tools/CMakeFiles/obspectrophore.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles 34 >[ 78%] Built target obprop >make -f src/GUI/CMakeFiles/obgui.dir/build.make src/GUI/CMakeFiles/obgui.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/GUI /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/GUI /builddir/build/BUILD/openbabel-2.3.2/src/GUI/CMakeFiles/obgui.dir/DependInfo.cmake --color= >[ 79%] Dependee "/builddir/build/BUILD/openbabel-2.3.2/src/GUI/CMakeFiles/obgui.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/src/GUI/CMakeFiles/obgui.dir/depend.internal". >Dependee "/builddir/build/BUILD/openbabel-2.3.2/src/GUI/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/src/GUI/CMakeFiles/obgui.dir/depend.internal". >Building CXX object tools/CMakeFiles/obspectrophore.dir/obspectrophore.o >cd /builddir/build/BUILD/openbabel-2.3.2/tools && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -o CMakeFiles/obspectrophore.dir/obspectrophore.o -c /builddir/build/BUILD/openbabel-2.3.2/tools/obspectrophore.cpp >Linking CXX executable ../bin/obrotamer >cd /builddir/build/BUILD/openbabel-2.3.2/tools && /usr/bin/cmake -E cmake_link_script CMakeFiles/obrotamer.dir/link.txt --verbose=1 >/usr/bin/c++ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro CMakeFiles/obrotamer.dir/obrotamer.o -o ../bin/obrotamer -rdynamic ../lib/libopenbabel.so.4.0.2 -lm -ldl -lz >Scanning dependencies of target obgui >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f src/GUI/CMakeFiles/obgui.dir/build.make src/GUI/CMakeFiles/obgui.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles 31 >[ 80%] Building CXX object src/GUI/CMakeFiles/obgui.dir/OBGUI.o >cd /builddir/build/BUILD/openbabel-2.3.2/src/GUI && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -I/builddir/build/BUILD/openbabel-2.3.2/src/GUI/. -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -o CMakeFiles/obgui.dir/OBGUI.o -c /builddir/build/BUILD/openbabel-2.3.2/src/GUI/OBGUI.cpp >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 80%] Built target obrotamer >make -f test/CMakeFiles/roundtrip.dir/build.make test/CMakeFiles/roundtrip.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/test /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/test /builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/roundtrip.dir/DependInfo.cmake --color= >Dependee "/builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/roundtrip.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/roundtrip.dir/depend.internal". >Dependee "/builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/roundtrip.dir/depend.internal". >Scanning dependencies of target roundtrip >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f test/CMakeFiles/roundtrip.dir/build.make test/CMakeFiles/roundtrip.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles 75 >[ 81%] Building CXX object test/CMakeFiles/roundtrip.dir/roundtrip.o >cd /builddir/build/BUILD/openbabel-2.3.2/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -DTESTDATADIR="\"/builddir/build/BUILD/openbabel-2.3.2/test/files/\"" -DFORMATDIR="\"/builddir/build/BUILD/openbabel-2.3.2/lib/\"" -o CMakeFiles/roundtrip.dir/roundtrip.o -c /builddir/build/BUILD/openbabel-2.3.2/test/roundtrip.cpp >/builddir/build/BUILD/openbabel-2.3.2/tools/obrotate.cpp: In function 'int main(int, char**)': >/builddir/build/BUILD/openbabel-2.3.2/tools/obrotate.cpp:151:57: warning: 'a4' may be used uninitialized in this function [-Wmaybe-uninitialized] > mol.SetTorsion(a1, a2, a3, a4, angle * DEG_TO_RAD); > ^ >/builddir/build/BUILD/openbabel-2.3.2/tools/obrotate.cpp:146:31: warning: 'a3' may be used uninitialized in this function [-Wmaybe-uninitialized] > if ( !a2->IsConnected(a3) ) { > ^ >/builddir/build/BUILD/openbabel-2.3.2/tools/obrotate.cpp:146:31: warning: 'a2' may be used uninitialized in this function [-Wmaybe-uninitialized] >/builddir/build/BUILD/openbabel-2.3.2/tools/obrotate.cpp:151:57: warning: 'a1' may be used uninitialized in this function [-Wmaybe-uninitialized] > mol.SetTorsion(a1, a2, a3, a4, angle * DEG_TO_RAD); > ^ >Linking CXX executable ../bin/obrotate >cd /builddir/build/BUILD/openbabel-2.3.2/tools && /usr/bin/cmake -E cmake_link_script CMakeFiles/obrotate.dir/link.txt --verbose=1 >/usr/bin/c++ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro CMakeFiles/obrotate.dir/obrotate.o -o ../bin/obrotate -rdynamic ../lib/libopenbabel.so.4.0.2 -lm -ldl -lz >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 81%] Built target obrotate >make -f test/CMakeFiles/test_aromatest.dir/build.make test/CMakeFiles/test_aromatest.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/test /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/test /builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_aromatest.dir/DependInfo.cmake --color= >Dependee "/builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_aromatest.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_aromatest.dir/depend.internal". >Dependee "/builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_aromatest.dir/depend.internal". >Scanning dependencies of target test_aromatest >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f test/CMakeFiles/test_aromatest.dir/build.make test/CMakeFiles/test_aromatest.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles 77 >[ 82%] Building CXX object test/CMakeFiles/test_aromatest.dir/aromatest.o >cd /builddir/build/BUILD/openbabel-2.3.2/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -DTESTDATADIR="\"/builddir/build/BUILD/openbabel-2.3.2/test/files/\"" -DFORMATDIR="\"/builddir/build/BUILD/openbabel-2.3.2/lib/\"" -o CMakeFiles/test_aromatest.dir/aromatest.o -c /builddir/build/BUILD/openbabel-2.3.2/test/aromatest.cpp >Linking CXX executable ../bin/roundtrip >cd /builddir/build/BUILD/openbabel-2.3.2/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/roundtrip.dir/link.txt --verbose=1 >/usr/bin/c++ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro CMakeFiles/roundtrip.dir/roundtrip.o -o ../bin/roundtrip -rdynamic ../lib/libopenbabel.so.4.0.2 -lm -ldl -lz >In file included from /builddir/build/BUILD/openbabel-2.3.2/src/GUI/OBGUI.cpp:26:0: >/builddir/build/BUILD/openbabel-2.3.2/src/GUI/./selformats.h: In member function 'bool ActiveFormats::Add(wxString&)': >/builddir/build/BUILD/openbabel-2.3.2/src/GUI/./selformats.h:82:52: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] > return (ActiveFormatsString.find(format+_T(';')) != -1); > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/GUI/OBGUI.cpp: In member function 'virtual bool OBGUIApp::OnInit()': >/builddir/build/BUILD/openbabel-2.3.2/src/GUI/OBGUI.cpp:126:21: warning: unused variable 'splash' [-Wunused-variable] > wxSplashScreen* splash = new wxSplashScreen(bitmap, > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/GUI/OBGUI.cpp: In member function 'void OBGUIFrame::DisplayInputFiles(wxArrayString)': >/builddir/build/BUILD/openbabel-2.3.2/src/GUI/OBGUI.cpp:720:12: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] > for(i=0;i<filepatharray.GetCount();++i) > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/GUI/OBGUI.cpp: In member function 'bool OBGUIFrame::SetChoice(wxChoice*, const wxString&)': >/builddir/build/BUILD/openbabel-2.3.2/src/GUI/OBGUI.cpp:844:22: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] > for(int iSel=0;iSel<pChoice->GetCount();iSel++) > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/GUI/OBGUI.cpp: In member function 'wxString OBGUIFrame::ShortenedPath(const wxString&, const wxWindow&, int)': >/builddir/build/BUILD/openbabel-2.3.2/src/GUI/OBGUI.cpp:888:10: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] > if(pos1==wxNOT_FOUND || pos1+1 == path.length()) return path; > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/GUI/OBGUI.cpp:890:10: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] > if(pos1==wxNOT_FOUND || pos1+1 == path.length()) return path; > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/GUI/OBGUI.cpp:897:12: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] > if(pos2==wxNOT_FOUND || pos2+1 == tpath.length()) return path; > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/GUI/OBGUI.cpp:900:46: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] > if(tpath.find_first_of(_T("/\\"), pos2+1)==wxNOT_FOUND) return path; > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/GUI/OBGUI.cpp: In member function 'void OBGUIFrame::GetAvailableFormats()': >/builddir/build/BUILD/openbabel-2.3.2/src/GUI/OBGUI.cpp:954:13: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] > if(pos!=wxString::npos) > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/GUI/OBGUI.cpp:959:11: warning: variable 'n' set but not used [-Wunused-but-set-variable] > int n; > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/GUI/OBGUI.cpp: In member function 'void OBGUIFrame::MakePluginsMenu()': >/builddir/build/BUILD/openbabel-2.3.2/src/GUI/OBGUI.cpp:1055:24: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] > for(int itop=0; itop < topvec.size(); ++itop) > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/GUI/OBGUI.cpp:1063:26: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] > for(int isub=0; isub < subvec.size(); ++isub) > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/GUI/OBGUI.cpp: In member function 'void CFilenames::OnKeyPress(wxKeyEvent&)': >/builddir/build/BUILD/openbabel-2.3.2/src/GUI/OBGUI.cpp:1141:50: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] > if(nameWithWildcard.find_first_of(_T("*?"))==wxNOT_FOUND) > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/GUI/OBGUI.cpp:1157:18: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] > for(i=0;i<filelist.size();++i) > ^ >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles 75 >[ 82%] Built target roundtrip >make -f test/CMakeFiles/test_atom.dir/build.make test/CMakeFiles/test_atom.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/test /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/test /builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_atom.dir/DependInfo.cmake --color= >Dependee "/builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_atom.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_atom.dir/depend.internal". >Dependee "/builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_atom.dir/depend.internal". >Scanning dependencies of target test_atom >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f test/CMakeFiles/test_atom.dir/build.make test/CMakeFiles/test_atom.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 82%] Building CXX object test/CMakeFiles/test_atom.dir/atom.o >cd /builddir/build/BUILD/openbabel-2.3.2/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -DTESTDATADIR="\"/builddir/build/BUILD/openbabel-2.3.2/test/files/\"" -DFORMATDIR="\"/builddir/build/BUILD/openbabel-2.3.2/lib/\"" -o CMakeFiles/test_atom.dir/atom.o -c /builddir/build/BUILD/openbabel-2.3.2/test/atom.cpp >Linking CXX executable ../bin/test_aromatest >cd /builddir/build/BUILD/openbabel-2.3.2/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_aromatest.dir/link.txt --verbose=1 >/usr/bin/c++ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro CMakeFiles/test_aromatest.dir/aromatest.o -o ../bin/test_aromatest -rdynamic ../lib/libopenbabel.so.4.0.2 -lm -ldl -lz >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles 77 >[ 82%] Built target test_aromatest >make -f test/CMakeFiles/test_automorphism.dir/build.make test/CMakeFiles/test_automorphism.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/test /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/test /builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_automorphism.dir/DependInfo.cmake --color= >Dependee "/builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_automorphism.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_automorphism.dir/depend.internal". >Dependee "/builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_automorphism.dir/depend.internal". >Scanning dependencies of target test_automorphism >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f test/CMakeFiles/test_automorphism.dir/build.make test/CMakeFiles/test_automorphism.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 82%] Building CXX object test/CMakeFiles/test_automorphism.dir/automorphismtest.o >cd /builddir/build/BUILD/openbabel-2.3.2/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -DTESTDATADIR="\"/builddir/build/BUILD/openbabel-2.3.2/test/files/\"" -DFORMATDIR="\"/builddir/build/BUILD/openbabel-2.3.2/lib/\"" -o CMakeFiles/test_automorphism.dir/automorphismtest.o -c /builddir/build/BUILD/openbabel-2.3.2/test/automorphismtest.cpp >Linking CXX executable ../bin/test_atom >cd /builddir/build/BUILD/openbabel-2.3.2/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_atom.dir/link.txt --verbose=1 >/usr/bin/c++ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro CMakeFiles/test_atom.dir/atom.o -o ../bin/test_atom -rdynamic ../lib/libopenbabel.so.4.0.2 -lm -ldl -lz >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 82%] Built target test_atom >make -f test/CMakeFiles/test_bond.dir/build.make test/CMakeFiles/test_bond.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/test /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/test /builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_bond.dir/DependInfo.cmake --color= >Dependee "/builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_bond.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_bond.dir/depend.internal". >Dependee "/builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_bond.dir/depend.internal". >Scanning dependencies of target test_bond >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f test/CMakeFiles/test_bond.dir/build.make test/CMakeFiles/test_bond.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles 78 >[ 83%] Building CXX object test/CMakeFiles/test_bond.dir/bond.o >cd /builddir/build/BUILD/openbabel-2.3.2/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -DTESTDATADIR="\"/builddir/build/BUILD/openbabel-2.3.2/test/files/\"" -DFORMATDIR="\"/builddir/build/BUILD/openbabel-2.3.2/lib/\"" -o CMakeFiles/test_bond.dir/bond.o -c /builddir/build/BUILD/openbabel-2.3.2/test/bond.cpp >Linking CXX executable ../bin/obspectrophore >cd /builddir/build/BUILD/openbabel-2.3.2/tools && /usr/bin/cmake -E cmake_link_script CMakeFiles/obspectrophore.dir/link.txt --verbose=1 >/usr/bin/c++ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro CMakeFiles/obspectrophore.dir/obspectrophore.o -o ../bin/obspectrophore -rdynamic ../lib/libopenbabel.so.4.0.2 -lm -ldl -lz >/builddir/build/BUILD/openbabel-2.3.2/test/automorphismtest.cpp: In function 'bool doAutomorphismTest(OpenBabel::OBMol&, int)': >/builddir/build/BUILD/openbabel-2.3.2/test/automorphismtest.cpp:21:20: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] > return (G.size() == numAutomorphisms); > ^ >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles 34 >[ 83%] Built target obspectrophore >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 83%] Building CXX object src/GUI/CMakeFiles/obgui.dir/stdwx.o >cd /builddir/build/BUILD/openbabel-2.3.2/src/GUI && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -I/builddir/build/BUILD/openbabel-2.3.2/src/GUI/. -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -o CMakeFiles/obgui.dir/stdwx.o -c /builddir/build/BUILD/openbabel-2.3.2/src/GUI/stdwx.cpp >Linking CXX executable ../bin/test_bond >cd /builddir/build/BUILD/openbabel-2.3.2/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_bond.dir/link.txt --verbose=1 >/usr/bin/c++ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro CMakeFiles/test_bond.dir/bond.o -o ../bin/test_bond -rdynamic ../lib/libopenbabel.so.4.0.2 -lm -ldl -lz >Linking CXX executable ../bin/test_automorphism >cd /builddir/build/BUILD/openbabel-2.3.2/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_automorphism.dir/link.txt --verbose=1 >/usr/bin/c++ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro CMakeFiles/test_automorphism.dir/automorphismtest.o -o ../bin/test_automorphism -rdynamic ../lib/libopenbabel.so.4.0.2 -lm -ldl -lz >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles 78 >[ 83%] Built target test_bond >make -f test/CMakeFiles/test_builder.dir/build.make test/CMakeFiles/test_builder.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/test /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/test /builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_builder.dir/DependInfo.cmake --color= >Dependee "/builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_builder.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_builder.dir/depend.internal". >Dependee "/builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_builder.dir/depend.internal". >Scanning dependencies of target test_builder >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f test/CMakeFiles/test_builder.dir/build.make test/CMakeFiles/test_builder.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 83%] Building CXX object test/CMakeFiles/test_builder.dir/buildertest.o >cd /builddir/build/BUILD/openbabel-2.3.2/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -DTESTDATADIR="\"/builddir/build/BUILD/openbabel-2.3.2/test/files/\"" -DFORMATDIR="\"/builddir/build/BUILD/openbabel-2.3.2/lib/\"" -o CMakeFiles/test_builder.dir/buildertest.o -c /builddir/build/BUILD/openbabel-2.3.2/test/buildertest.cpp >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 83%] Built target test_automorphism >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 83%] Building CXX object src/GUI/CMakeFiles/obgui.dir/optswx.o >cd /builddir/build/BUILD/openbabel-2.3.2/src/GUI && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -I/builddir/build/BUILD/openbabel-2.3.2/src/GUI/. -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -o CMakeFiles/obgui.dir/optswx.o -c /builddir/build/BUILD/openbabel-2.3.2/src/GUI/optswx.cpp >In file included from /builddir/build/BUILD/openbabel-2.3.2/src/GUI/./stdwx.h:50:0, > from /builddir/build/BUILD/openbabel-2.3.2/src/GUI/stdwx.cpp:1: >/builddir/build/BUILD/openbabel-2.3.2/src/GUI/./babel.xpm:2:20: warning: 'sample_xpm' defined but not used [-Wunused-variable] > static const char *sample_xpm[] = { > ^ >make -f test/CMakeFiles/test_canonconsistent.dir/build.make test/CMakeFiles/test_canonconsistent.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/test /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/test /builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_canonconsistent.dir/DependInfo.cmake --color= >Dependee "/builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_canonconsistent.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_canonconsistent.dir/depend.internal". >Dependee "/builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_canonconsistent.dir/depend.internal". >Scanning dependencies of target test_canonconsistent >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f test/CMakeFiles/test_canonconsistent.dir/build.make test/CMakeFiles/test_canonconsistent.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 83%] Building CXX object test/CMakeFiles/test_canonconsistent.dir/canonconsistenttest.o >cd /builddir/build/BUILD/openbabel-2.3.2/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -DTESTDATADIR="\"/builddir/build/BUILD/openbabel-2.3.2/test/files/\"" -DFORMATDIR="\"/builddir/build/BUILD/openbabel-2.3.2/lib/\"" -o CMakeFiles/test_canonconsistent.dir/canonconsistenttest.o -c /builddir/build/BUILD/openbabel-2.3.2/test/canonconsistenttest.cpp >/builddir/build/BUILD/openbabel-2.3.2/src/GUI/optswx.cpp: In member function 'bool DynOptionswx::Construct(const char*, const char*, int)': >/builddir/build/BUILD/openbabel-2.3.2/src/GUI/optswx.cpp:223:47: warning: suggest parentheses around assignment used as truth value [-Wparentheses] > if(pdef=strcasestr(pCaption,"default")) > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/GUI/optswx.cpp:226:17: warning: unused variable 'tok' [-Wunused-variable] > char* tok=strtok(pdef," :-\t</\"\'"); > ^ >/builddir/build/BUILD/openbabel-2.3.2/src/GUI/optswx.cpp:293:60: warning: statement has no effect [-Wunused-value] > strcasecmp(pdef,"no") && !strcasecmp(pdef,"not") && strcasecmp(pdef,"none"); > ^ >Linking CXX executable ../bin/test_builder >cd /builddir/build/BUILD/openbabel-2.3.2/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_builder.dir/link.txt --verbose=1 >/usr/bin/c++ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro CMakeFiles/test_builder.dir/buildertest.o -o ../bin/test_builder -rdynamic ../lib/libopenbabel.so.4.0.2 -lm -ldl -lz >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 83%] Built target test_builder >make -f test/CMakeFiles/test_canonstable.dir/build.make test/CMakeFiles/test_canonstable.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/test /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/test /builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_canonstable.dir/DependInfo.cmake --color= >Dependee "/builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_canonstable.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_canonstable.dir/depend.internal". >Dependee "/builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_canonstable.dir/depend.internal". >Scanning dependencies of target test_canonstable >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f test/CMakeFiles/test_canonstable.dir/build.make test/CMakeFiles/test_canonstable.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles 79 >[ 84%] Building CXX object test/CMakeFiles/test_canonstable.dir/canonstabletest.o >cd /builddir/build/BUILD/openbabel-2.3.2/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -DTESTDATADIR="\"/builddir/build/BUILD/openbabel-2.3.2/test/files/\"" -DFORMATDIR="\"/builddir/build/BUILD/openbabel-2.3.2/lib/\"" -o CMakeFiles/test_canonstable.dir/canonstabletest.o -c /builddir/build/BUILD/openbabel-2.3.2/test/canonstabletest.cpp >Linking CXX executable ../bin/test_canonconsistent >cd /builddir/build/BUILD/openbabel-2.3.2/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_canonconsistent.dir/link.txt --verbose=1 >/usr/bin/c++ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro CMakeFiles/test_canonconsistent.dir/canonconsistenttest.o -o ../bin/test_canonconsistent -rdynamic ../lib/libopenbabel.so.4.0.2 -lm -ldl -lz >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 84%] Built target test_canonconsistent >make -f test/CMakeFiles/test_cansmi.dir/build.make test/CMakeFiles/test_cansmi.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/test /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/test /builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_cansmi.dir/DependInfo.cmake --color= >Dependee "/builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_cansmi.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_cansmi.dir/depend.internal". >Dependee "/builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_cansmi.dir/depend.internal". >Scanning dependencies of target test_cansmi >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f test/CMakeFiles/test_cansmi.dir/build.make test/CMakeFiles/test_cansmi.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 84%] Building CXX object test/CMakeFiles/test_cansmi.dir/cansmi.o >cd /builddir/build/BUILD/openbabel-2.3.2/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -DTESTDATADIR="\"/builddir/build/BUILD/openbabel-2.3.2/test/files/\"" -DFORMATDIR="\"/builddir/build/BUILD/openbabel-2.3.2/lib/\"" -o CMakeFiles/test_cansmi.dir/cansmi.o -c /builddir/build/BUILD/openbabel-2.3.2/test/cansmi.cpp >In file included from /builddir/build/BUILD/openbabel-2.3.2/src/GUI/./stdwx.h:50:0, > from /builddir/build/BUILD/openbabel-2.3.2/src/GUI/optswx.cpp:19: >/builddir/build/BUILD/openbabel-2.3.2/src/GUI/./babel.xpm: At global scope: >/builddir/build/BUILD/openbabel-2.3.2/src/GUI/./babel.xpm:2:20: warning: 'sample_xpm' defined but not used [-Wunused-variable] > static const char *sample_xpm[] = { > ^ >make -f test/CMakeFiles/test_charge-gasteiger.dir/build.make test/CMakeFiles/test_charge-gasteiger.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/test /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/test /builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_charge-gasteiger.dir/DependInfo.cmake --color= >Dependee "/builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_charge-gasteiger.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_charge-gasteiger.dir/depend.internal". >Dependee "/builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_charge-gasteiger.dir/depend.internal". >Scanning dependencies of target test_charge-gasteiger >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f test/CMakeFiles/test_charge-gasteiger.dir/build.make test/CMakeFiles/test_charge-gasteiger.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles 80 >[ 85%] Building CXX object test/CMakeFiles/test_charge-gasteiger.dir/charge-gasteiger.o >cd /builddir/build/BUILD/openbabel-2.3.2/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -DTESTDATADIR="\"/builddir/build/BUILD/openbabel-2.3.2/test/files/\"" -DFORMATDIR="\"/builddir/build/BUILD/openbabel-2.3.2/lib/\"" -o CMakeFiles/test_charge-gasteiger.dir/charge-gasteiger.o -c /builddir/build/BUILD/openbabel-2.3.2/test/charge-gasteiger.cpp >Linking CXX executable ../bin/test_canonstable >cd /builddir/build/BUILD/openbabel-2.3.2/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_canonstable.dir/link.txt --verbose=1 >/usr/bin/c++ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro CMakeFiles/test_canonstable.dir/canonstabletest.o -o ../bin/test_canonstable -rdynamic ../lib/libopenbabel.so.4.0.2 -lm -ldl -lz >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles 79 >[ 85%] Built target test_canonstable >make -f test/CMakeFiles/test_charge-mmff94.dir/build.make test/CMakeFiles/test_charge-mmff94.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/test /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/test /builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_charge-mmff94.dir/DependInfo.cmake --color= >Dependee "/builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_charge-mmff94.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_charge-mmff94.dir/depend.internal". >Dependee "/builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_charge-mmff94.dir/depend.internal". >Scanning dependencies of target test_charge-mmff94 >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f test/CMakeFiles/test_charge-mmff94.dir/build.make test/CMakeFiles/test_charge-mmff94.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 85%] Building CXX object test/CMakeFiles/test_charge-mmff94.dir/charge-mmff94.o >cd /builddir/build/BUILD/openbabel-2.3.2/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -DTESTDATADIR="\"/builddir/build/BUILD/openbabel-2.3.2/test/files/\"" -DFORMATDIR="\"/builddir/build/BUILD/openbabel-2.3.2/lib/\"" -o CMakeFiles/test_charge-mmff94.dir/charge-mmff94.o -c /builddir/build/BUILD/openbabel-2.3.2/test/charge-mmff94.cpp >Linking CXX executable ../bin/test_cansmi >cd /builddir/build/BUILD/openbabel-2.3.2/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_cansmi.dir/link.txt --verbose=1 >/usr/bin/c++ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro CMakeFiles/test_cansmi.dir/cansmi.o -o ../bin/test_cansmi -rdynamic ../lib/libopenbabel.so.4.0.2 -lm -ldl -lz >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 85%] Built target test_cansmi >make -f test/CMakeFiles/test_cistrans.dir/build.make test/CMakeFiles/test_cistrans.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/test /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/test /builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_cistrans.dir/DependInfo.cmake --color= >Dependee "/builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_cistrans.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_cistrans.dir/depend.internal". >Dependee "/builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_cistrans.dir/depend.internal". >Scanning dependencies of target test_cistrans >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f test/CMakeFiles/test_cistrans.dir/build.make test/CMakeFiles/test_cistrans.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 85%] Building CXX object test/CMakeFiles/test_cistrans.dir/cistranstest.o >cd /builddir/build/BUILD/openbabel-2.3.2/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -DTESTDATADIR="\"/builddir/build/BUILD/openbabel-2.3.2/test/files/\"" -DFORMATDIR="\"/builddir/build/BUILD/openbabel-2.3.2/lib/\"" -o CMakeFiles/test_cistrans.dir/cistranstest.o -c /builddir/build/BUILD/openbabel-2.3.2/test/cistranstest.cpp >Linking CXX executable ../../bin/obgui >cd /builddir/build/BUILD/openbabel-2.3.2/src/GUI && /usr/bin/cmake -E cmake_link_script CMakeFiles/obgui.dir/link.txt --verbose=1 >/usr/bin/c++ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro CMakeFiles/obgui.dir/OBGUI.o CMakeFiles/obgui.dir/stdwx.o CMakeFiles/obgui.dir/optswx.o -o ../../bin/obgui -rdynamic ../../lib/libopenbabel.so.4.0.2 -pthread -Wl,-z,relro -lwx_baseu-2.8 -lwx_gtk2u_core-2.8 -lwx_gtk2u_adv-2.8 -lm -ldl -lz >/builddir/build/BUILD/openbabel-2.3.2/test/cistranstest.cpp:144:3: warning: multi-line comment [-Wcomment] > // / \ | | / / \ > ^ >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles 31 >[ 85%] Built target obgui >make -f test/CMakeFiles/test_conversion.dir/build.make test/CMakeFiles/test_conversion.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/test /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/test /builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_conversion.dir/DependInfo.cmake --color= >Dependee "/builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_conversion.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_conversion.dir/depend.internal". >Dependee "/builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_conversion.dir/depend.internal". >Scanning dependencies of target test_conversion >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f test/CMakeFiles/test_conversion.dir/build.make test/CMakeFiles/test_conversion.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles 81 >[ 86%] Building CXX object test/CMakeFiles/test_conversion.dir/conversion.o >cd /builddir/build/BUILD/openbabel-2.3.2/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -DTESTDATADIR="\"/builddir/build/BUILD/openbabel-2.3.2/test/files/\"" -DFORMATDIR="\"/builddir/build/BUILD/openbabel-2.3.2/lib/\"" -o CMakeFiles/test_conversion.dir/conversion.o -c /builddir/build/BUILD/openbabel-2.3.2/test/conversion.cpp >Linking CXX executable ../bin/test_charge-gasteiger >cd /builddir/build/BUILD/openbabel-2.3.2/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_charge-gasteiger.dir/link.txt --verbose=1 >/usr/bin/c++ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro CMakeFiles/test_charge-gasteiger.dir/charge-gasteiger.o -o ../bin/test_charge-gasteiger -rdynamic ../lib/libopenbabel.so.4.0.2 -lm -ldl -lz >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles 80 >[ 86%] Built target test_charge-gasteiger >make -f test/CMakeFiles/test_datatest.dir/build.make test/CMakeFiles/test_datatest.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/test /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/test /builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_datatest.dir/DependInfo.cmake --color= >Dependee "/builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_datatest.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_datatest.dir/depend.internal". >Dependee "/builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_datatest.dir/depend.internal". >Scanning dependencies of target test_datatest >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f test/CMakeFiles/test_datatest.dir/build.make test/CMakeFiles/test_datatest.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 86%] Building CXX object test/CMakeFiles/test_datatest.dir/datatest.o >cd /builddir/build/BUILD/openbabel-2.3.2/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -DTESTDATADIR="\"/builddir/build/BUILD/openbabel-2.3.2/test/files/\"" -DFORMATDIR="\"/builddir/build/BUILD/openbabel-2.3.2/lib/\"" -o CMakeFiles/test_datatest.dir/datatest.o -c /builddir/build/BUILD/openbabel-2.3.2/test/datatest.cpp >Linking CXX executable ../bin/test_charge-mmff94 >cd /builddir/build/BUILD/openbabel-2.3.2/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_charge-mmff94.dir/link.txt --verbose=1 >/usr/bin/c++ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro CMakeFiles/test_charge-mmff94.dir/charge-mmff94.o -o ../bin/test_charge-mmff94 -rdynamic ../lib/libopenbabel.so.4.0.2 -lm -ldl -lz >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 86%] Built target test_charge-mmff94 >make -f test/CMakeFiles/test_ffgaff.dir/build.make test/CMakeFiles/test_ffgaff.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/test /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/test /builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_ffgaff.dir/DependInfo.cmake --color= >Dependee "/builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_ffgaff.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_ffgaff.dir/depend.internal". >Dependee "/builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_ffgaff.dir/depend.internal". >Scanning dependencies of target test_ffgaff >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f test/CMakeFiles/test_ffgaff.dir/build.make test/CMakeFiles/test_ffgaff.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 86%] Building CXX object test/CMakeFiles/test_ffgaff.dir/ffgaff.o >cd /builddir/build/BUILD/openbabel-2.3.2/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -DTESTDATADIR="\"/builddir/build/BUILD/openbabel-2.3.2/test/files/\"" -DFORMATDIR="\"/builddir/build/BUILD/openbabel-2.3.2/lib/\"" -o CMakeFiles/test_ffgaff.dir/ffgaff.o -c /builddir/build/BUILD/openbabel-2.3.2/test/ffgaff.cpp >Linking CXX executable ../bin/test_conversion >cd /builddir/build/BUILD/openbabel-2.3.2/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_conversion.dir/link.txt --verbose=1 >/usr/bin/c++ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro CMakeFiles/test_conversion.dir/conversion.o -o ../bin/test_conversion -rdynamic ../lib/libopenbabel.so.4.0.2 -lm -ldl -lz >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles 81 >[ 86%] Built target test_conversion >make -f test/CMakeFiles/test_ffghemical.dir/build.make test/CMakeFiles/test_ffghemical.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/test /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/test /builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_ffghemical.dir/DependInfo.cmake --color= >Dependee "/builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_ffghemical.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_ffghemical.dir/depend.internal". >Dependee "/builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_ffghemical.dir/depend.internal". >Scanning dependencies of target test_ffghemical >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f test/CMakeFiles/test_ffghemical.dir/build.make test/CMakeFiles/test_ffghemical.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles 82 >[ 87%] Building CXX object test/CMakeFiles/test_ffghemical.dir/ffghemical.o >cd /builddir/build/BUILD/openbabel-2.3.2/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -DTESTDATADIR="\"/builddir/build/BUILD/openbabel-2.3.2/test/files/\"" -DFORMATDIR="\"/builddir/build/BUILD/openbabel-2.3.2/lib/\"" -o CMakeFiles/test_ffghemical.dir/ffghemical.o -c /builddir/build/BUILD/openbabel-2.3.2/test/ffghemical.cpp >Linking CXX executable ../bin/test_datatest >cd /builddir/build/BUILD/openbabel-2.3.2/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_datatest.dir/link.txt --verbose=1 >/usr/bin/c++ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro CMakeFiles/test_datatest.dir/datatest.o -o ../bin/test_datatest -rdynamic ../lib/libopenbabel.so.4.0.2 -lm -ldl -lz >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 87%] Built target test_datatest >make -f test/CMakeFiles/test_ffmmff94.dir/build.make test/CMakeFiles/test_ffmmff94.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/test /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/test /builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_ffmmff94.dir/DependInfo.cmake --color= >Dependee "/builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_ffmmff94.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_ffmmff94.dir/depend.internal". >Dependee "/builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_ffmmff94.dir/depend.internal". >Scanning dependencies of target test_ffmmff94 >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f test/CMakeFiles/test_ffmmff94.dir/build.make test/CMakeFiles/test_ffmmff94.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 87%] Building CXX object test/CMakeFiles/test_ffmmff94.dir/ffmmff94.o >cd /builddir/build/BUILD/openbabel-2.3.2/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -DTESTDATADIR="\"/builddir/build/BUILD/openbabel-2.3.2/test/files/\"" -DFORMATDIR="\"/builddir/build/BUILD/openbabel-2.3.2/lib/\"" -o CMakeFiles/test_ffmmff94.dir/ffmmff94.o -c /builddir/build/BUILD/openbabel-2.3.2/test/ffmmff94.cpp >Linking CXX executable ../bin/test_cistrans >cd /builddir/build/BUILD/openbabel-2.3.2/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_cistrans.dir/link.txt --verbose=1 >/usr/bin/c++ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro CMakeFiles/test_cistrans.dir/cistranstest.o -o ../bin/test_cistrans -rdynamic ../lib/libopenbabel.so.4.0.2 -lm -ldl -lz >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 87%] Built target test_cistrans >make -f test/CMakeFiles/test_ffuff.dir/build.make test/CMakeFiles/test_ffuff.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/test /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/test /builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_ffuff.dir/DependInfo.cmake --color= >Dependee "/builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_ffuff.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_ffuff.dir/depend.internal". >Dependee "/builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_ffuff.dir/depend.internal". >Scanning dependencies of target test_ffuff >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f test/CMakeFiles/test_ffuff.dir/build.make test/CMakeFiles/test_ffuff.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 87%] Building CXX object test/CMakeFiles/test_ffuff.dir/ffuff.o >cd /builddir/build/BUILD/openbabel-2.3.2/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -DTESTDATADIR="\"/builddir/build/BUILD/openbabel-2.3.2/test/files/\"" -DFORMATDIR="\"/builddir/build/BUILD/openbabel-2.3.2/lib/\"" -o CMakeFiles/test_ffuff.dir/ffuff.o -c /builddir/build/BUILD/openbabel-2.3.2/test/ffuff.cpp >Linking CXX executable ../bin/test_ffgaff >cd /builddir/build/BUILD/openbabel-2.3.2/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_ffgaff.dir/link.txt --verbose=1 >/usr/bin/c++ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro CMakeFiles/test_ffgaff.dir/ffgaff.o -o ../bin/test_ffgaff -rdynamic ../lib/libopenbabel.so.4.0.2 -lm -ldl -lz >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 87%] Built target test_ffgaff >make -f test/CMakeFiles/test_formalcharge.dir/build.make test/CMakeFiles/test_formalcharge.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/test /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/test /builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_formalcharge.dir/DependInfo.cmake --color= >Dependee "/builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_formalcharge.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_formalcharge.dir/depend.internal". >Dependee "/builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_formalcharge.dir/depend.internal". >Scanning dependencies of target test_formalcharge >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f test/CMakeFiles/test_formalcharge.dir/build.make test/CMakeFiles/test_formalcharge.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles 83 >[ 88%] Building CXX object test/CMakeFiles/test_formalcharge.dir/formalcharge.o >cd /builddir/build/BUILD/openbabel-2.3.2/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -DTESTDATADIR="\"/builddir/build/BUILD/openbabel-2.3.2/test/files/\"" -DFORMATDIR="\"/builddir/build/BUILD/openbabel-2.3.2/lib/\"" -o CMakeFiles/test_formalcharge.dir/formalcharge.o -c /builddir/build/BUILD/openbabel-2.3.2/test/formalcharge.cpp >Linking CXX executable ../bin/test_ffghemical >cd /builddir/build/BUILD/openbabel-2.3.2/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_ffghemical.dir/link.txt --verbose=1 >/usr/bin/c++ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro CMakeFiles/test_ffghemical.dir/ffghemical.o -o ../bin/test_ffghemical -rdynamic ../lib/libopenbabel.so.4.0.2 -lm -ldl -lz >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles 82 >[ 88%] Built target test_ffghemical >make -f test/CMakeFiles/test_format.dir/build.make test/CMakeFiles/test_format.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/test /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/test /builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_format.dir/DependInfo.cmake --color= >Dependee "/builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_format.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_format.dir/depend.internal". >Dependee "/builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_format.dir/depend.internal". >Scanning dependencies of target test_format >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f test/CMakeFiles/test_format.dir/build.make test/CMakeFiles/test_format.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 88%] Building CXX object test/CMakeFiles/test_format.dir/format.o >cd /builddir/build/BUILD/openbabel-2.3.2/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -DTESTDATADIR="\"/builddir/build/BUILD/openbabel-2.3.2/test/files/\"" -DFORMATDIR="\"/builddir/build/BUILD/openbabel-2.3.2/lib/\"" -o CMakeFiles/test_format.dir/format.o -c /builddir/build/BUILD/openbabel-2.3.2/test/format.cpp >Linking CXX executable ../bin/test_ffuff >cd /builddir/build/BUILD/openbabel-2.3.2/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_ffuff.dir/link.txt --verbose=1 >/usr/bin/c++ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro CMakeFiles/test_ffuff.dir/ffuff.o -o ../bin/test_ffuff -rdynamic ../lib/libopenbabel.so.4.0.2 -lm -ldl -lz >Linking CXX executable ../bin/test_ffmmff94 >cd /builddir/build/BUILD/openbabel-2.3.2/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_ffmmff94.dir/link.txt --verbose=1 >/usr/bin/c++ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro CMakeFiles/test_ffmmff94.dir/ffmmff94.o -o ../bin/test_ffmmff94 -rdynamic ../lib/libopenbabel.so.4.0.2 -lm -ldl -lz >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 88%] Built target test_ffuff >make -f test/CMakeFiles/test_formula.dir/build.make test/CMakeFiles/test_formula.dir/depend >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/test /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/test /builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_formula.dir/DependInfo.cmake --color= >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 88%] Built target test_ffmmff94 >Dependee "/builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_formula.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_formula.dir/depend.internal". >Dependee "/builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_formula.dir/depend.internal". >make -f test/CMakeFiles/test_graphsym.dir/build.make test/CMakeFiles/test_graphsym.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/test /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/test /builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_graphsym.dir/DependInfo.cmake --color= >Scanning dependencies of target test_formula >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f test/CMakeFiles/test_formula.dir/build.make test/CMakeFiles/test_formula.dir/build >Dependee "/builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_graphsym.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_graphsym.dir/depend.internal". >Dependee "/builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_graphsym.dir/depend.internal". >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 88%] Scanning dependencies of target test_graphsym >Building CXX object test/CMakeFiles/test_formula.dir/formula.o >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -DTESTDATADIR="\"/builddir/build/BUILD/openbabel-2.3.2/test/files/\"" -DFORMATDIR="\"/builddir/build/BUILD/openbabel-2.3.2/lib/\"" -o CMakeFiles/test_formula.dir/formula.o -c /builddir/build/BUILD/openbabel-2.3.2/test/formula.cpp >make -f test/CMakeFiles/test_graphsym.dir/build.make test/CMakeFiles/test_graphsym.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles 84 >[ 89%] Building CXX object test/CMakeFiles/test_graphsym.dir/graphsymtest.o >cd /builddir/build/BUILD/openbabel-2.3.2/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -DTESTDATADIR="\"/builddir/build/BUILD/openbabel-2.3.2/test/files/\"" -DFORMATDIR="\"/builddir/build/BUILD/openbabel-2.3.2/lib/\"" -o CMakeFiles/test_graphsym.dir/graphsymtest.o -c /builddir/build/BUILD/openbabel-2.3.2/test/graphsymtest.cpp >Linking CXX executable ../bin/test_formalcharge >cd /builddir/build/BUILD/openbabel-2.3.2/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_formalcharge.dir/link.txt --verbose=1 >/usr/bin/c++ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro CMakeFiles/test_formalcharge.dir/formalcharge.o -o ../bin/test_formalcharge -rdynamic ../lib/libopenbabel.so.4.0.2 -lm -ldl -lz >Linking CXX executable ../bin/test_format >cd /builddir/build/BUILD/openbabel-2.3.2/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_format.dir/link.txt --verbose=1 >/usr/bin/c++ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro CMakeFiles/test_format.dir/format.o -o ../bin/test_format -rdynamic ../lib/libopenbabel.so.4.0.2 -lm -ldl -lz >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles 83 >[ 89%] Built target test_formalcharge >make -f test/CMakeFiles/test_implicitH.dir/build.make test/CMakeFiles/test_implicitH.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/test /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/test /builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_implicitH.dir/DependInfo.cmake --color= >Dependee "/builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_implicitH.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_implicitH.dir/depend.internal". >Dependee "/builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_implicitH.dir/depend.internal". >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >Scanning dependencies of target test_implicitH >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f test/CMakeFiles/test_implicitH.dir/build.make test/CMakeFiles/test_implicitH.dir/build >[ 89%] make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >Built target test_format >make -f test/CMakeFiles/test_inchiwrite.dir/build.make test/CMakeFiles/test_inchiwrite.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/test /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/test /builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_inchiwrite.dir/DependInfo.cmake --color= >[ 89%] Dependee "/builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_inchiwrite.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_inchiwrite.dir/depend.internal". >Dependee "/builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_inchiwrite.dir/depend.internal". >Building CXX object test/CMakeFiles/test_implicitH.dir/implicitHtest.o >cd /builddir/build/BUILD/openbabel-2.3.2/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -DTESTDATADIR="\"/builddir/build/BUILD/openbabel-2.3.2/test/files/\"" -DFORMATDIR="\"/builddir/build/BUILD/openbabel-2.3.2/lib/\"" -o CMakeFiles/test_implicitH.dir/implicitHtest.o -c /builddir/build/BUILD/openbabel-2.3.2/test/implicitHtest.cpp >Scanning dependencies of target test_inchiwrite >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f test/CMakeFiles/test_inchiwrite.dir/build.make test/CMakeFiles/test_inchiwrite.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 89%] Building CXX object test/CMakeFiles/test_inchiwrite.dir/inchiwrite.o >cd /builddir/build/BUILD/openbabel-2.3.2/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -DTESTDATADIR="\"/builddir/build/BUILD/openbabel-2.3.2/test/files/\"" -DFORMATDIR="\"/builddir/build/BUILD/openbabel-2.3.2/lib/\"" -o CMakeFiles/test_inchiwrite.dir/inchiwrite.o -c /builddir/build/BUILD/openbabel-2.3.2/test/inchiwrite.cpp >In file included from /builddir/build/BUILD/openbabel-2.3.2/test/graphsymtest.cpp:1:0: >/builddir/build/BUILD/openbabel-2.3.2/test/graphsymtest.cpp: In function 'void countGraphSymClassesTest(const string&, int)': >/builddir/build/BUILD/openbabel-2.3.2/test/graphsymtest.cpp:114:16: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] > OB_ASSERT( n == numberOfClasses); > ^ >/builddir/build/BUILD/openbabel-2.3.2/test/obtest.h:29:6: note: in definition of macro 'OB_ASSERT' > ( (exp) ? static_cast<void>(0) : report_error(#exp, __FILE__, __LINE__, FUNCTION_SIGNATURE, false) ) > ^ >/builddir/build/BUILD/openbabel-2.3.2/test/graphsymtest.cpp:115:9: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] > if (n != numberOfClasses) { > ^ >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles 85 >[ 90%] Building CXX object test/CMakeFiles/test_inchiwrite.dir/__/src/formats/getinchi.o >cd /builddir/build/BUILD/openbabel-2.3.2/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -DTESTDATADIR="\"/builddir/build/BUILD/openbabel-2.3.2/test/files/\"" -DFORMATDIR="\"/builddir/build/BUILD/openbabel-2.3.2/lib/\"" -o CMakeFiles/test_inchiwrite.dir/__/src/formats/getinchi.o -c /builddir/build/BUILD/openbabel-2.3.2/src/formats/getinchi.cpp >Linking CXX executable ../bin/test_formula >cd /builddir/build/BUILD/openbabel-2.3.2/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_formula.dir/link.txt --verbose=1 >/usr/bin/c++ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro CMakeFiles/test_formula.dir/formula.o -o ../bin/test_formula -rdynamic ../lib/libopenbabel.so.4.0.2 -lm -ldl -lz >Linking CXX executable ../bin/test_implicitH >cd /builddir/build/BUILD/openbabel-2.3.2/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_implicitH.dir/link.txt --verbose=1 >/usr/bin/c++ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro CMakeFiles/test_implicitH.dir/implicitHtest.o -o ../bin/test_implicitH -rdynamic ../lib/libopenbabel.so.4.0.2 -lm -ldl -lz >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 90%] Built target test_formula >make -f test/CMakeFiles/test_internalcoord.dir/build.make test/CMakeFiles/test_internalcoord.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/test /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/test /builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_internalcoord.dir/DependInfo.cmake --color= >Dependee "/builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_internalcoord.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_internalcoord.dir/depend.internal". >Dependee "/builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_internalcoord.dir/depend.internal". >Scanning dependencies of target test_internalcoord >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f test/CMakeFiles/test_internalcoord.dir/build.make test/CMakeFiles/test_internalcoord.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 90%] make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >Building CXX object test/CMakeFiles/test_internalcoord.dir/internalcoord.o >cd /builddir/build/BUILD/openbabel-2.3.2/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -DTESTDATADIR="\"/builddir/build/BUILD/openbabel-2.3.2/test/files/\"" -DFORMATDIR="\"/builddir/build/BUILD/openbabel-2.3.2/lib/\"" -o CMakeFiles/test_internalcoord.dir/internalcoord.o -c /builddir/build/BUILD/openbabel-2.3.2/test/internalcoord.cpp >[ 90%] Built target test_implicitH >make -f test/CMakeFiles/test_invalidsmarts.dir/build.make test/CMakeFiles/test_invalidsmarts.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/test /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/test /builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_invalidsmarts.dir/DependInfo.cmake --color= >Dependee "/builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_invalidsmarts.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_invalidsmarts.dir/depend.internal". >Dependee "/builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_invalidsmarts.dir/depend.internal". >Scanning dependencies of target test_invalidsmarts >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f test/CMakeFiles/test_invalidsmarts.dir/build.make test/CMakeFiles/test_invalidsmarts.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 90%] Building CXX object test/CMakeFiles/test_invalidsmarts.dir/invalidsmarts.o >cd /builddir/build/BUILD/openbabel-2.3.2/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -DTESTDATADIR="\"/builddir/build/BUILD/openbabel-2.3.2/test/files/\"" -DFORMATDIR="\"/builddir/build/BUILD/openbabel-2.3.2/lib/\"" -o CMakeFiles/test_invalidsmarts.dir/invalidsmarts.o -c /builddir/build/BUILD/openbabel-2.3.2/test/invalidsmarts.cpp >Linking CXX executable ../bin/test_inchiwrite >cd /builddir/build/BUILD/openbabel-2.3.2/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_inchiwrite.dir/link.txt --verbose=1 >/usr/bin/c++ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro CMakeFiles/test_inchiwrite.dir/inchiwrite.o CMakeFiles/test_inchiwrite.dir/__/src/formats/getinchi.o -o ../bin/test_inchiwrite -rdynamic ../lib/libopenbabel.so.4.0.2 -lm -ldl -lz >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles 85 >[ 90%] Built target test_inchiwrite >make -f test/CMakeFiles/test_invalidsmiles.dir/build.make test/CMakeFiles/test_invalidsmiles.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/test /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/test /builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_invalidsmiles.dir/DependInfo.cmake --color= >Dependee "/builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_invalidsmiles.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_invalidsmiles.dir/depend.internal". >Dependee "/builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_invalidsmiles.dir/depend.internal". >Scanning dependencies of target test_invalidsmiles >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f test/CMakeFiles/test_invalidsmiles.dir/build.make test/CMakeFiles/test_invalidsmiles.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles 86 >[ 91%] Building CXX object test/CMakeFiles/test_invalidsmiles.dir/invalidsmiles.o >cd /builddir/build/BUILD/openbabel-2.3.2/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -DTESTDATADIR="\"/builddir/build/BUILD/openbabel-2.3.2/test/files/\"" -DFORMATDIR="\"/builddir/build/BUILD/openbabel-2.3.2/lib/\"" -o CMakeFiles/test_invalidsmiles.dir/invalidsmiles.o -c /builddir/build/BUILD/openbabel-2.3.2/test/invalidsmiles.cpp >Linking CXX executable ../bin/test_internalcoord >cd /builddir/build/BUILD/openbabel-2.3.2/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_internalcoord.dir/link.txt --verbose=1 >/usr/bin/c++ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro CMakeFiles/test_internalcoord.dir/internalcoord.o -o ../bin/test_internalcoord -rdynamic ../lib/libopenbabel.so.4.0.2 -lm -ldl -lz >Linking CXX executable ../bin/test_graphsym >cd /builddir/build/BUILD/openbabel-2.3.2/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_graphsym.dir/link.txt --verbose=1 >/usr/bin/c++ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro CMakeFiles/test_graphsym.dir/graphsymtest.o -o ../bin/test_graphsym -rdynamic ../lib/libopenbabel.so.4.0.2 -lm -ldl -lz >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 91%] Built target test_internalcoord >make -f test/CMakeFiles/test_isomorphism.dir/build.make test/CMakeFiles/test_isomorphism.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/test /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/test /builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_isomorphism.dir/DependInfo.cmake --color= >Dependee "/builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_isomorphism.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_isomorphism.dir/depend.internal". >Dependee "/builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_isomorphism.dir/depend.internal". >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >Scanning dependencies of target test_isomorphism >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles 84 >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f test/CMakeFiles/test_isomorphism.dir/build.make test/CMakeFiles/test_isomorphism.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 91%] Built target test_graphsym >make -f test/CMakeFiles/test_iterators.dir/build.make test/CMakeFiles/test_iterators.dir/depend >[ 91%] make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/test /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/test /builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_iterators.dir/DependInfo.cmake --color= >Building CXX object test/CMakeFiles/test_isomorphism.dir/isomorphismtest.o >cd /builddir/build/BUILD/openbabel-2.3.2/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -DTESTDATADIR="\"/builddir/build/BUILD/openbabel-2.3.2/test/files/\"" -DFORMATDIR="\"/builddir/build/BUILD/openbabel-2.3.2/lib/\"" -o CMakeFiles/test_isomorphism.dir/isomorphismtest.o -c /builddir/build/BUILD/openbabel-2.3.2/test/isomorphismtest.cpp >Dependee "/builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_iterators.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_iterators.dir/depend.internal". >Dependee "/builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_iterators.dir/depend.internal". >Scanning dependencies of target test_iterators >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f test/CMakeFiles/test_iterators.dir/build.make test/CMakeFiles/test_iterators.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 91%] Building CXX object test/CMakeFiles/test_iterators.dir/iterators.o >cd /builddir/build/BUILD/openbabel-2.3.2/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -DTESTDATADIR="\"/builddir/build/BUILD/openbabel-2.3.2/test/files/\"" -DFORMATDIR="\"/builddir/build/BUILD/openbabel-2.3.2/lib/\"" -o CMakeFiles/test_iterators.dir/iterators.o -c /builddir/build/BUILD/openbabel-2.3.2/test/iterators.cpp >Linking CXX executable ../bin/test_invalidsmarts >cd /builddir/build/BUILD/openbabel-2.3.2/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_invalidsmarts.dir/link.txt --verbose=1 >/usr/bin/c++ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro CMakeFiles/test_invalidsmarts.dir/invalidsmarts.o -o ../bin/test_invalidsmarts -rdynamic ../lib/libopenbabel.so.4.0.2 -lm -ldl -lz >/builddir/build/BUILD/openbabel-2.3.2/test/isomorphismtest.cpp:118:3: warning: multi-line comment [-Wcomment] > // /\ /\ /\ > ^ >/builddir/build/BUILD/openbabel-2.3.2/test/isomorphismtest.cpp:169:3: warning: multi-line comment [-Wcomment] > // /\ /\ /\ > ^ >/builddir/build/BUILD/openbabel-2.3.2/test/isomorphismtest.cpp:191:3: warning: multi-line comment [-Wcomment] > // /\ /\ /\ > ^ >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 91%] Built target test_invalidsmarts >make -f test/CMakeFiles/test_logp_psa.dir/build.make test/CMakeFiles/test_logp_psa.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/test /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/test /builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_logp_psa.dir/DependInfo.cmake --color= >Dependee "/builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_logp_psa.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_logp_psa.dir/depend.internal". >Dependee "/builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_logp_psa.dir/depend.internal". >Scanning dependencies of target test_logp_psa >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f test/CMakeFiles/test_logp_psa.dir/build.make test/CMakeFiles/test_logp_psa.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles 87 >[ 92%] Building CXX object test/CMakeFiles/test_logp_psa.dir/logp_psa.o >cd /builddir/build/BUILD/openbabel-2.3.2/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -DTESTDATADIR="\"/builddir/build/BUILD/openbabel-2.3.2/test/files/\"" -DFORMATDIR="\"/builddir/build/BUILD/openbabel-2.3.2/lib/\"" -o CMakeFiles/test_logp_psa.dir/logp_psa.o -c /builddir/build/BUILD/openbabel-2.3.2/test/logp_psa.cpp >Linking CXX executable ../bin/test_invalidsmiles >cd /builddir/build/BUILD/openbabel-2.3.2/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_invalidsmiles.dir/link.txt --verbose=1 >/usr/bin/c++ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro CMakeFiles/test_invalidsmiles.dir/invalidsmiles.o -o ../bin/test_invalidsmiles -rdynamic ../lib/libopenbabel.so.4.0.2 -lm -ldl -lz >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles 86 >[ 92%] Built target test_invalidsmiles >make -f test/CMakeFiles/test_lssr.dir/build.make test/CMakeFiles/test_lssr.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/test /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/test /builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_lssr.dir/DependInfo.cmake --color= >Dependee "/builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_lssr.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_lssr.dir/depend.internal". >Dependee "/builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_lssr.dir/depend.internal". >Scanning dependencies of target test_lssr >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f test/CMakeFiles/test_lssr.dir/build.make test/CMakeFiles/test_lssr.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 92%] Building CXX object test/CMakeFiles/test_lssr.dir/lssrtest.o >cd /builddir/build/BUILD/openbabel-2.3.2/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -DTESTDATADIR="\"/builddir/build/BUILD/openbabel-2.3.2/test/files/\"" -DFORMATDIR="\"/builddir/build/BUILD/openbabel-2.3.2/lib/\"" -o CMakeFiles/test_lssr.dir/lssrtest.o -c /builddir/build/BUILD/openbabel-2.3.2/test/lssrtest.cpp >Linking CXX executable ../bin/test_iterators >cd /builddir/build/BUILD/openbabel-2.3.2/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_iterators.dir/link.txt --verbose=1 >/usr/bin/c++ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro CMakeFiles/test_iterators.dir/iterators.o -o ../bin/test_iterators -rdynamic ../lib/libopenbabel.so.4.0.2 -lm -ldl -lz >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 92%] Built target test_iterators >make -f test/CMakeFiles/test_math.dir/build.make test/CMakeFiles/test_math.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/test /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/test /builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_math.dir/DependInfo.cmake --color= >Linking CXX executable ../bin/test_logp_psa >cd /builddir/build/BUILD/openbabel-2.3.2/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_logp_psa.dir/link.txt --verbose=1 >Dependee "/builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_math.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_math.dir/depend.internal". >Dependee "/builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_math.dir/depend.internal". >/usr/bin/c++ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro CMakeFiles/test_logp_psa.dir/logp_psa.o -o ../bin/test_logp_psa -rdynamic ../lib/libopenbabel.so.4.0.2 -lm -ldl -lz >Scanning dependencies of target test_math >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f test/CMakeFiles/test_math.dir/build.make test/CMakeFiles/test_math.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 92%] Building CXX object test/CMakeFiles/test_math.dir/math.o >cd /builddir/build/BUILD/openbabel-2.3.2/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -DTESTDATADIR="\"/builddir/build/BUILD/openbabel-2.3.2/test/files/\"" -DFORMATDIR="\"/builddir/build/BUILD/openbabel-2.3.2/lib/\"" -o CMakeFiles/test_math.dir/math.o -c /builddir/build/BUILD/openbabel-2.3.2/test/math.cpp >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles 87 >[ 92%] Built target test_logp_psa >make -f test/CMakeFiles/test_mol.dir/build.make test/CMakeFiles/test_mol.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/test /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/test /builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_mol.dir/DependInfo.cmake --color= >Dependee "/builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_mol.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_mol.dir/depend.internal". >Dependee "/builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_mol.dir/depend.internal". >Scanning dependencies of target test_mol >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f test/CMakeFiles/test_mol.dir/build.make test/CMakeFiles/test_mol.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles 88 >[ 93%] Building CXX object test/CMakeFiles/test_mol.dir/mol.o >cd /builddir/build/BUILD/openbabel-2.3.2/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -DTESTDATADIR="\"/builddir/build/BUILD/openbabel-2.3.2/test/files/\"" -DFORMATDIR="\"/builddir/build/BUILD/openbabel-2.3.2/lib/\"" -o CMakeFiles/test_mol.dir/mol.o -c /builddir/build/BUILD/openbabel-2.3.2/test/mol.cpp >Linking CXX executable ../bin/test_math >cd /builddir/build/BUILD/openbabel-2.3.2/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_math.dir/link.txt --verbose=1 >/usr/bin/c++ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro CMakeFiles/test_math.dir/math.o -o ../bin/test_math -rdynamic ../lib/libopenbabel.so.4.0.2 -lm -ldl -lz >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 93%] Built target test_math >make -f test/CMakeFiles/test_phmodel.dir/build.make test/CMakeFiles/test_phmodel.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/test /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/test /builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_phmodel.dir/DependInfo.cmake --color= >Dependee "/builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_phmodel.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_phmodel.dir/depend.internal". >Dependee "/builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_phmodel.dir/depend.internal". >Scanning dependencies of target test_phmodel >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f test/CMakeFiles/test_phmodel.dir/build.make test/CMakeFiles/test_phmodel.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 93%] Building CXX object test/CMakeFiles/test_phmodel.dir/phmodel.o >cd /builddir/build/BUILD/openbabel-2.3.2/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -DTESTDATADIR="\"/builddir/build/BUILD/openbabel-2.3.2/test/files/\"" -DFORMATDIR="\"/builddir/build/BUILD/openbabel-2.3.2/lib/\"" -o CMakeFiles/test_phmodel.dir/phmodel.o -c /builddir/build/BUILD/openbabel-2.3.2/test/phmodel.cpp >Linking CXX executable ../bin/test_mol >cd /builddir/build/BUILD/openbabel-2.3.2/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_mol.dir/link.txt --verbose=1 >/usr/bin/c++ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro CMakeFiles/test_mol.dir/mol.o -o ../bin/test_mol -rdynamic ../lib/libopenbabel.so.4.0.2 -lm -ldl -lz >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles 88 >[ 93%] Built target test_mol >make -f test/CMakeFiles/test_residue.dir/build.make test/CMakeFiles/test_residue.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/test /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/test /builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_residue.dir/DependInfo.cmake --color= >Dependee "/builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_residue.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_residue.dir/depend.internal". >Dependee "/builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_residue.dir/depend.internal". >Scanning dependencies of target test_residue >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f test/CMakeFiles/test_residue.dir/build.make test/CMakeFiles/test_residue.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 93%] Building CXX object test/CMakeFiles/test_residue.dir/residue.o >cd /builddir/build/BUILD/openbabel-2.3.2/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -DTESTDATADIR="\"/builddir/build/BUILD/openbabel-2.3.2/test/files/\"" -DFORMATDIR="\"/builddir/build/BUILD/openbabel-2.3.2/lib/\"" -o CMakeFiles/test_residue.dir/residue.o -c /builddir/build/BUILD/openbabel-2.3.2/test/residue.cpp >Linking CXX executable ../bin/test_isomorphism >cd /builddir/build/BUILD/openbabel-2.3.2/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_isomorphism.dir/link.txt --verbose=1 >/usr/bin/c++ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro CMakeFiles/test_isomorphism.dir/isomorphismtest.o -o ../bin/test_isomorphism -rdynamic ../lib/libopenbabel.so.4.0.2 -lm -ldl -lz >Linking CXX executable ../bin/test_lssr >cd /builddir/build/BUILD/openbabel-2.3.2/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_lssr.dir/link.txt --verbose=1 >/usr/bin/c++ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro CMakeFiles/test_lssr.dir/lssrtest.o -o ../bin/test_lssr -rdynamic ../lib/libopenbabel.so.4.0.2 -lm -ldl -lz >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 93%] Built target test_isomorphism >make -f test/CMakeFiles/test_ringtest.dir/build.make test/CMakeFiles/test_ringtest.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/test /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/test /builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_ringtest.dir/DependInfo.cmake --color= >Dependee "/builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_ringtest.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_ringtest.dir/depend.internal". >Dependee "/builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_ringtest.dir/depend.internal". >Scanning dependencies of target test_ringtest >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f test/CMakeFiles/test_ringtest.dir/build.make test/CMakeFiles/test_ringtest.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles 89 >[ 94%] Building CXX object test/CMakeFiles/test_ringtest.dir/ringtest.o >cd /builddir/build/BUILD/openbabel-2.3.2/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -DTESTDATADIR="\"/builddir/build/BUILD/openbabel-2.3.2/test/files/\"" -DFORMATDIR="\"/builddir/build/BUILD/openbabel-2.3.2/lib/\"" -o CMakeFiles/test_ringtest.dir/ringtest.o -c /builddir/build/BUILD/openbabel-2.3.2/test/ringtest.cpp >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 94%] Built target test_lssr >make -f test/CMakeFiles/test_rotor.dir/build.make test/CMakeFiles/test_rotor.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/test /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/test /builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_rotor.dir/DependInfo.cmake --color= >Dependee "/builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_rotor.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_rotor.dir/depend.internal". >Dependee "/builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_rotor.dir/depend.internal". >Scanning dependencies of target test_rotor >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f test/CMakeFiles/test_rotor.dir/build.make test/CMakeFiles/test_rotor.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 94%] Building CXX object test/CMakeFiles/test_rotor.dir/rotortest.o >cd /builddir/build/BUILD/openbabel-2.3.2/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -DTESTDATADIR="\"/builddir/build/BUILD/openbabel-2.3.2/test/files/\"" -DFORMATDIR="\"/builddir/build/BUILD/openbabel-2.3.2/lib/\"" -o CMakeFiles/test_rotor.dir/rotortest.o -c /builddir/build/BUILD/openbabel-2.3.2/test/rotortest.cpp >Linking CXX executable ../bin/test_residue >cd /builddir/build/BUILD/openbabel-2.3.2/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_residue.dir/link.txt --verbose=1 >/usr/bin/c++ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro CMakeFiles/test_residue.dir/residue.o -o ../bin/test_residue -rdynamic ../lib/libopenbabel.so.4.0.2 -lm -ldl -lz >Linking CXX executable ../bin/test_phmodel >cd /builddir/build/BUILD/openbabel-2.3.2/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_phmodel.dir/link.txt --verbose=1 >/usr/bin/c++ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro CMakeFiles/test_phmodel.dir/phmodel.o -o ../bin/test_phmodel -rdynamic ../lib/libopenbabel.so.4.0.2 -lm -ldl -lz >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 94%] Built target test_residue >make -f test/CMakeFiles/test_shuffle.dir/build.make test/CMakeFiles/test_shuffle.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/test /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/test /builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_shuffle.dir/DependInfo.cmake --color= >Dependee "/builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_shuffle.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_shuffle.dir/depend.internal". >Dependee "/builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_shuffle.dir/depend.internal". >Scanning dependencies of target test_shuffle >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f test/CMakeFiles/test_shuffle.dir/build.make test/CMakeFiles/test_shuffle.dir/build >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles 90 >[ 94%] [ 95%] Built target test_phmodel >make -f test/CMakeFiles/test_smartsparse.dir/build.make test/CMakeFiles/test_smartsparse.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/test /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/test /builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_smartsparse.dir/DependInfo.cmake --color= >Building CXX object test/CMakeFiles/test_shuffle.dir/shuffletest.o >cd /builddir/build/BUILD/openbabel-2.3.2/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -DTESTDATADIR="\"/builddir/build/BUILD/openbabel-2.3.2/test/files/\"" -DFORMATDIR="\"/builddir/build/BUILD/openbabel-2.3.2/lib/\"" -o CMakeFiles/test_shuffle.dir/shuffletest.o -c /builddir/build/BUILD/openbabel-2.3.2/test/shuffletest.cpp >Dependee "/builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_smartsparse.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_smartsparse.dir/depend.internal". >Dependee "/builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_smartsparse.dir/depend.internal". >Scanning dependencies of target test_smartsparse >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f test/CMakeFiles/test_smartsparse.dir/build.make test/CMakeFiles/test_smartsparse.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 95%] Building CXX object test/CMakeFiles/test_smartsparse.dir/smartsparse.o >cd /builddir/build/BUILD/openbabel-2.3.2/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -DTESTDATADIR="\"/builddir/build/BUILD/openbabel-2.3.2/test/files/\"" -DFORMATDIR="\"/builddir/build/BUILD/openbabel-2.3.2/lib/\"" -o CMakeFiles/test_smartsparse.dir/smartsparse.o -c /builddir/build/BUILD/openbabel-2.3.2/test/smartsparse.cpp >Linking CXX executable ../bin/test_ringtest >cd /builddir/build/BUILD/openbabel-2.3.2/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_ringtest.dir/link.txt --verbose=1 >/usr/bin/c++ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro CMakeFiles/test_ringtest.dir/ringtest.o -o ../bin/test_ringtest -rdynamic ../lib/libopenbabel.so.4.0.2 -lm -ldl -lz >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles 89 >[ 95%] Built target test_ringtest >make -f test/CMakeFiles/test_smartstest.dir/build.make test/CMakeFiles/test_smartstest.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/test /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/test /builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_smartstest.dir/DependInfo.cmake --color= >Dependee "/builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_smartstest.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_smartstest.dir/depend.internal". >Dependee "/builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_smartstest.dir/depend.internal". >Scanning dependencies of target test_smartstest >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f test/CMakeFiles/test_smartstest.dir/build.make test/CMakeFiles/test_smartstest.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 95%] Building CXX object test/CMakeFiles/test_smartstest.dir/smartstest.o >cd /builddir/build/BUILD/openbabel-2.3.2/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -DTESTDATADIR="\"/builddir/build/BUILD/openbabel-2.3.2/test/files/\"" -DFORMATDIR="\"/builddir/build/BUILD/openbabel-2.3.2/lib/\"" -o CMakeFiles/test_smartstest.dir/smartstest.o -c /builddir/build/BUILD/openbabel-2.3.2/test/smartstest.cpp >Linking CXX executable ../bin/test_rotor >cd /builddir/build/BUILD/openbabel-2.3.2/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_rotor.dir/link.txt --verbose=1 >/usr/bin/c++ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro CMakeFiles/test_rotor.dir/rotortest.o -o ../bin/test_rotor -rdynamic ../lib/libopenbabel.so.4.0.2 -lm -ldl -lz >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 95%] Built target test_rotor >make -f test/CMakeFiles/test_smiles.dir/build.make test/CMakeFiles/test_smiles.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/test /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/test /builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_smiles.dir/DependInfo.cmake --color= >Dependee "/builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_smiles.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_smiles.dir/depend.internal". >Dependee "/builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_smiles.dir/depend.internal". >Scanning dependencies of target test_smiles >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f test/CMakeFiles/test_smiles.dir/build.make test/CMakeFiles/test_smiles.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles 91 >[ 96%] Building CXX object test/CMakeFiles/test_smiles.dir/smilestest.o >cd /builddir/build/BUILD/openbabel-2.3.2/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -DTESTDATADIR="\"/builddir/build/BUILD/openbabel-2.3.2/test/files/\"" -DFORMATDIR="\"/builddir/build/BUILD/openbabel-2.3.2/lib/\"" -o CMakeFiles/test_smiles.dir/smilestest.o -c /builddir/build/BUILD/openbabel-2.3.2/test/smilestest.cpp >Linking CXX executable ../bin/test_smartsparse >cd /builddir/build/BUILD/openbabel-2.3.2/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_smartsparse.dir/link.txt --verbose=1 >/usr/bin/c++ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro CMakeFiles/test_smartsparse.dir/smartsparse.o -o ../bin/test_smartsparse -rdynamic ../lib/libopenbabel.so.4.0.2 -lm -ldl -lz >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 96%] Built target test_smartsparse >make -f test/CMakeFiles/test_smilesmatch.dir/build.make test/CMakeFiles/test_smilesmatch.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/test /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/test /builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_smilesmatch.dir/DependInfo.cmake --color= >Dependee "/builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_smilesmatch.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_smilesmatch.dir/depend.internal". >Dependee "/builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_smilesmatch.dir/depend.internal". >Scanning dependencies of target test_smilesmatch >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f test/CMakeFiles/test_smilesmatch.dir/build.make test/CMakeFiles/test_smilesmatch.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 96%] Building CXX object test/CMakeFiles/test_smilesmatch.dir/smilesmatch.o >cd /builddir/build/BUILD/openbabel-2.3.2/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -DTESTDATADIR="\"/builddir/build/BUILD/openbabel-2.3.2/test/files/\"" -DFORMATDIR="\"/builddir/build/BUILD/openbabel-2.3.2/lib/\"" -o CMakeFiles/test_smilesmatch.dir/smilesmatch.o -c /builddir/build/BUILD/openbabel-2.3.2/test/smilesmatch.cpp >Linking CXX executable ../bin/test_smilesmatch >cd /builddir/build/BUILD/openbabel-2.3.2/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_smilesmatch.dir/link.txt --verbose=1 >/usr/bin/c++ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro CMakeFiles/test_smilesmatch.dir/smilesmatch.o -o ../bin/test_smilesmatch -rdynamic ../lib/libopenbabel.so.4.0.2 -lm -ldl -lz >Linking CXX executable ../bin/test_smartstest >cd /builddir/build/BUILD/openbabel-2.3.2/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_smartstest.dir/link.txt --verbose=1 >/usr/bin/c++ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro CMakeFiles/test_smartstest.dir/smartstest.o -o ../bin/test_smartstest -rdynamic ../lib/libopenbabel.so.4.0.2 -lm -ldl -lz >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 96%] Built target test_smilesmatch >make -f test/CMakeFiles/test_spectrophore.dir/build.make test/CMakeFiles/test_spectrophore.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/test /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/test /builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_spectrophore.dir/DependInfo.cmake --color= >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 96%] Built target test_smartstest >make -f test/CMakeFiles/test_squareplanar.dir/build.make test/CMakeFiles/test_squareplanar.dir/depend >Dependee "/builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_spectrophore.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_spectrophore.dir/depend.internal". >Dependee "/builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_spectrophore.dir/depend.internal". >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/test /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/test /builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_squareplanar.dir/DependInfo.cmake --color= >Scanning dependencies of target test_spectrophore >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f test/CMakeFiles/test_spectrophore.dir/build.make test/CMakeFiles/test_spectrophore.dir/build >Dependee "/builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_squareplanar.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_squareplanar.dir/depend.internal". >Dependee "/builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_squareplanar.dir/depend.internal". >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >Scanning dependencies of target test_squareplanar >[ 96%] make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f test/CMakeFiles/test_squareplanar.dir/build.make test/CMakeFiles/test_squareplanar.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles 92 >[ 97%] Building CXX object test/CMakeFiles/test_spectrophore.dir/spectrophoretest.o >cd /builddir/build/BUILD/openbabel-2.3.2/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -DTESTDATADIR="\"/builddir/build/BUILD/openbabel-2.3.2/test/files/\"" -DFORMATDIR="\"/builddir/build/BUILD/openbabel-2.3.2/lib/\"" -o CMakeFiles/test_spectrophore.dir/spectrophoretest.o -c /builddir/build/BUILD/openbabel-2.3.2/test/spectrophoretest.cpp >Building CXX object test/CMakeFiles/test_squareplanar.dir/squareplanartest.o >cd /builddir/build/BUILD/openbabel-2.3.2/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -DTESTDATADIR="\"/builddir/build/BUILD/openbabel-2.3.2/test/files/\"" -DFORMATDIR="\"/builddir/build/BUILD/openbabel-2.3.2/lib/\"" -o CMakeFiles/test_squareplanar.dir/squareplanartest.o -c /builddir/build/BUILD/openbabel-2.3.2/test/squareplanartest.cpp >/builddir/build/BUILD/openbabel-2.3.2/test/squareplanartest.cpp:56:3: warning: multi-line comment [-Wcomment] > // / \ | | |/ | / \ > ^ >/builddir/build/BUILD/openbabel-2.3.2/test/squareplanartest.cpp:99:3: warning: multi-line comment [-Wcomment] > // / \ | | |/ | / \ > ^ >Linking CXX executable ../bin/test_squareplanar >cd /builddir/build/BUILD/openbabel-2.3.2/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_squareplanar.dir/link.txt --verbose=1 >/usr/bin/c++ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro CMakeFiles/test_squareplanar.dir/squareplanartest.o -o ../bin/test_squareplanar -rdynamic ../lib/libopenbabel.so.4.0.2 -lm -ldl -lz >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles 92 >[ 97%] Built target test_squareplanar >make -f test/CMakeFiles/test_stereo.dir/build.make test/CMakeFiles/test_stereo.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/test /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/test /builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_stereo.dir/DependInfo.cmake --color= >Dependee "/builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_stereo.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_stereo.dir/depend.internal". >Dependee "/builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_stereo.dir/depend.internal". >Scanning dependencies of target test_stereo >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f test/CMakeFiles/test_stereo.dir/build.make test/CMakeFiles/test_stereo.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 97%] Building CXX object test/CMakeFiles/test_stereo.dir/stereotest.o >cd /builddir/build/BUILD/openbabel-2.3.2/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -DTESTDATADIR="\"/builddir/build/BUILD/openbabel-2.3.2/test/files/\"" -DFORMATDIR="\"/builddir/build/BUILD/openbabel-2.3.2/lib/\"" -o CMakeFiles/test_stereo.dir/stereotest.o -c /builddir/build/BUILD/openbabel-2.3.2/test/stereotest.cpp >Linking CXX executable ../bin/test_smiles >cd /builddir/build/BUILD/openbabel-2.3.2/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_smiles.dir/link.txt --verbose=1 >/usr/bin/c++ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro CMakeFiles/test_smiles.dir/smilestest.o -o ../bin/test_smiles -rdynamic ../lib/libopenbabel.so.4.0.2 -lm -ldl -lz >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles 91 >[ 97%] Built target test_smiles >make -f test/CMakeFiles/test_stereoperception.dir/build.make test/CMakeFiles/test_stereoperception.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/test /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/test /builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_stereoperception.dir/DependInfo.cmake --color= >Dependee "/builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_stereoperception.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_stereoperception.dir/depend.internal". >Dependee "/builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_stereoperception.dir/depend.internal". >Scanning dependencies of target test_stereoperception >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f test/CMakeFiles/test_stereoperception.dir/build.make test/CMakeFiles/test_stereoperception.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 97%] Building CXX object test/CMakeFiles/test_stereoperception.dir/stereoperceptiontest.o >cd /builddir/build/BUILD/openbabel-2.3.2/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -DTESTDATADIR="\"/builddir/build/BUILD/openbabel-2.3.2/test/files/\"" -DFORMATDIR="\"/builddir/build/BUILD/openbabel-2.3.2/lib/\"" -o CMakeFiles/test_stereoperception.dir/stereoperceptiontest.o -c /builddir/build/BUILD/openbabel-2.3.2/test/stereoperceptiontest.cpp >/builddir/build/BUILD/openbabel-2.3.2/test/stereoperceptiontest.cpp:245:3: warning: multi-line comment [-Wcomment] > // / \ > ^ >/builddir/build/BUILD/openbabel-2.3.2/test/stereoperceptiontest.cpp:260:3: warning: multi-line comment [-Wcomment] > // / \ > ^ >/builddir/build/BUILD/openbabel-2.3.2/test/stereoperceptiontest.cpp:275:3: warning: multi-line comment [-Wcomment] > // \ > ^ >/builddir/build/BUILD/openbabel-2.3.2/test/stereoperceptiontest.cpp:277:3: warning: multi-line comment [-Wcomment] > // \ > ^ >/builddir/build/BUILD/openbabel-2.3.2/test/stereoperceptiontest.cpp:300:3: warning: multi-line comment [-Wcomment] > // \ > ^ >/builddir/build/BUILD/openbabel-2.3.2/test/stereoperceptiontest.cpp:317:3: warning: multi-line comment [-Wcomment] > // / \ > ^ >/builddir/build/BUILD/openbabel-2.3.2/test/stereoperceptiontest.cpp:327:3: warning: multi-line comment [-Wcomment] > // / \ > ^ >/builddir/build/BUILD/openbabel-2.3.2/test/stereoperceptiontest.cpp:337:3: warning: multi-line comment [-Wcomment] > // / \ > ^ >/builddir/build/BUILD/openbabel-2.3.2/test/stereoperceptiontest.cpp:354:3: warning: multi-line comment [-Wcomment] > // / \ > ^ >/builddir/build/BUILD/openbabel-2.3.2/test/stereoperceptiontest.cpp:365:3: warning: multi-line comment [-Wcomment] > // / \ > ^ >/builddir/build/BUILD/openbabel-2.3.2/test/stereoperceptiontest.cpp:378:3: warning: multi-line comment [-Wcomment] > // / \ > ^ >/builddir/build/BUILD/openbabel-2.3.2/test/stereoperceptiontest.cpp:389:3: warning: multi-line comment [-Wcomment] > // / \ > ^ >/builddir/build/BUILD/openbabel-2.3.2/test/stereoperceptiontest.cpp:418:3: warning: multi-line comment [-Wcomment] > // \ > ^ >/builddir/build/BUILD/openbabel-2.3.2/test/stereoperceptiontest.cpp:420:3: warning: multi-line comment [-Wcomment] > // \ > ^ >/builddir/build/BUILD/openbabel-2.3.2/test/stereotest.cpp: In function 'bool doStereoPerception(OpenBabel::OBMol&, int, int)': >/builddir/build/BUILD/openbabel-2.3.2/test/stereotest.cpp:100:12: warning: enumeration value 'ExtendedCisTrans' not handled in switch [-Wswitch] > switch (units.at(i).type) { > ^ >/builddir/build/BUILD/openbabel-2.3.2/test/stereotest.cpp:100:12: warning: enumeration value 'SquarePlanar' not handled in switch [-Wswitch] >/builddir/build/BUILD/openbabel-2.3.2/test/stereotest.cpp:100:12: warning: enumeration value 'ExtendedTetrahedral' not handled in switch [-Wswitch] >/builddir/build/BUILD/openbabel-2.3.2/test/stereotest.cpp:100:12: warning: enumeration value 'TrigonalBipyramidal' not handled in switch [-Wswitch] >/builddir/build/BUILD/openbabel-2.3.2/test/stereotest.cpp:100:12: warning: enumeration value 'Octahedral' not handled in switch [-Wswitch] >/builddir/build/BUILD/openbabel-2.3.2/test/stereotest.cpp: In function 'bool doStereoPerception2(OpenBabel::OBMol&, int, int)': >/builddir/build/BUILD/openbabel-2.3.2/test/stereotest.cpp:130:12: warning: enumeration value 'ExtendedCisTrans' not handled in switch [-Wswitch] > switch (units.at(i).type) { > ^ >/builddir/build/BUILD/openbabel-2.3.2/test/stereotest.cpp:130:12: warning: enumeration value 'SquarePlanar' not handled in switch [-Wswitch] >/builddir/build/BUILD/openbabel-2.3.2/test/stereotest.cpp:130:12: warning: enumeration value 'ExtendedTetrahedral' not handled in switch [-Wswitch] >/builddir/build/BUILD/openbabel-2.3.2/test/stereotest.cpp:130:12: warning: enumeration value 'TrigonalBipyramidal' not handled in switch [-Wswitch] >/builddir/build/BUILD/openbabel-2.3.2/test/stereotest.cpp:130:12: warning: enumeration value 'Octahedral' not handled in switch [-Wswitch] >Linking CXX executable ../bin/test_spectrophore >cd /builddir/build/BUILD/openbabel-2.3.2/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_spectrophore.dir/link.txt --verbose=1 >/usr/bin/c++ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro CMakeFiles/test_spectrophore.dir/spectrophoretest.o -o ../bin/test_spectrophore -rdynamic ../lib/libopenbabel.so.4.0.2 -lm -ldl -lz >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 97%] Built target test_spectrophore >make -f test/CMakeFiles/test_tetrahedral.dir/build.make test/CMakeFiles/test_tetrahedral.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/test /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/test /builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_tetrahedral.dir/DependInfo.cmake --color= >Dependee "/builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_tetrahedral.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_tetrahedral.dir/depend.internal". >Dependee "/builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_tetrahedral.dir/depend.internal". >Scanning dependencies of target test_tetrahedral >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f test/CMakeFiles/test_tetrahedral.dir/build.make test/CMakeFiles/test_tetrahedral.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles 93 >[ 98%] Building CXX object test/CMakeFiles/test_tetrahedral.dir/tetrahedraltest.o >cd /builddir/build/BUILD/openbabel-2.3.2/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -DTESTDATADIR="\"/builddir/build/BUILD/openbabel-2.3.2/test/files/\"" -DFORMATDIR="\"/builddir/build/BUILD/openbabel-2.3.2/lib/\"" -o CMakeFiles/test_tetrahedral.dir/tetrahedraltest.o -c /builddir/build/BUILD/openbabel-2.3.2/test/tetrahedraltest.cpp >Linking CXX executable ../bin/test_shuffle >cd /builddir/build/BUILD/openbabel-2.3.2/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_shuffle.dir/link.txt --verbose=1 >/usr/bin/c++ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro CMakeFiles/test_shuffle.dir/shuffletest.o -o ../bin/test_shuffle -rdynamic ../lib/libopenbabel.so.4.0.2 -lm -ldl -lz >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles 90 >[ 98%] Built target test_shuffle >make -f test/CMakeFiles/test_tetranonplanar.dir/build.make test/CMakeFiles/test_tetranonplanar.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/test /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/test /builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_tetranonplanar.dir/DependInfo.cmake --color= >Dependee "/builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_tetranonplanar.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_tetranonplanar.dir/depend.internal". >Dependee "/builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_tetranonplanar.dir/depend.internal". >Scanning dependencies of target test_tetranonplanar >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f test/CMakeFiles/test_tetranonplanar.dir/build.make test/CMakeFiles/test_tetranonplanar.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 98%] Building CXX object test/CMakeFiles/test_tetranonplanar.dir/tetranonplanartest.o >cd /builddir/build/BUILD/openbabel-2.3.2/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -DTESTDATADIR="\"/builddir/build/BUILD/openbabel-2.3.2/test/files/\"" -DFORMATDIR="\"/builddir/build/BUILD/openbabel-2.3.2/lib/\"" -o CMakeFiles/test_tetranonplanar.dir/tetranonplanartest.o -c /builddir/build/BUILD/openbabel-2.3.2/test/tetranonplanartest.cpp >/builddir/build/BUILD/openbabel-2.3.2/test/tetranonplanartest.cpp:22:1: warning: multi-line comment [-Wcomment] > // \ > ^ >Linking CXX executable ../bin/test_tetrahedral >cd /builddir/build/BUILD/openbabel-2.3.2/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_tetrahedral.dir/link.txt --verbose=1 >/usr/bin/c++ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro CMakeFiles/test_tetrahedral.dir/tetrahedraltest.o -o ../bin/test_tetrahedral -rdynamic ../lib/libopenbabel.so.4.0.2 -lm -ldl -lz >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles 93 >[ 98%] Built target test_tetrahedral >make -f test/CMakeFiles/test_tetraplanar.dir/build.make test/CMakeFiles/test_tetraplanar.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/test /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/test /builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_tetraplanar.dir/DependInfo.cmake --color= >Dependee "/builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_tetraplanar.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_tetraplanar.dir/depend.internal". >Dependee "/builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_tetraplanar.dir/depend.internal". >Scanning dependencies of target test_tetraplanar >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f test/CMakeFiles/test_tetraplanar.dir/build.make test/CMakeFiles/test_tetraplanar.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 98%] Building CXX object test/CMakeFiles/test_tetraplanar.dir/tetraplanartest.o >cd /builddir/build/BUILD/openbabel-2.3.2/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -DTESTDATADIR="\"/builddir/build/BUILD/openbabel-2.3.2/test/files/\"" -DFORMATDIR="\"/builddir/build/BUILD/openbabel-2.3.2/lib/\"" -o CMakeFiles/test_tetraplanar.dir/tetraplanartest.o -c /builddir/build/BUILD/openbabel-2.3.2/test/tetraplanartest.cpp >/builddir/build/BUILD/openbabel-2.3.2/test/tetraplanartest.cpp:11:1: warning: multi-line comment [-Wcomment] > // \ > ^ >Linking CXX executable ../bin/test_stereoperception >cd /builddir/build/BUILD/openbabel-2.3.2/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_stereoperception.dir/link.txt --verbose=1 >/usr/bin/c++ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro CMakeFiles/test_stereoperception.dir/stereoperceptiontest.o -o ../bin/test_stereoperception -rdynamic ../lib/libopenbabel.so.4.0.2 -lm -ldl -lz >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 98%] Built target test_stereoperception >make -f test/CMakeFiles/test_uniqueid.dir/build.make test/CMakeFiles/test_uniqueid.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/test /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/test /builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_uniqueid.dir/DependInfo.cmake --color= >Dependee "/builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_uniqueid.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_uniqueid.dir/depend.internal". >Dependee "/builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_uniqueid.dir/depend.internal". >Scanning dependencies of target test_uniqueid >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f test/CMakeFiles/test_uniqueid.dir/build.make test/CMakeFiles/test_uniqueid.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles 94 >[ 99%] Building CXX object test/CMakeFiles/test_uniqueid.dir/uniqueidtest.o >cd /builddir/build/BUILD/openbabel-2.3.2/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -DTESTDATADIR="\"/builddir/build/BUILD/openbabel-2.3.2/test/files/\"" -DFORMATDIR="\"/builddir/build/BUILD/openbabel-2.3.2/lib/\"" -o CMakeFiles/test_uniqueid.dir/uniqueidtest.o -c /builddir/build/BUILD/openbabel-2.3.2/test/uniqueidtest.cpp >Linking CXX executable ../bin/test_tetranonplanar >cd /builddir/build/BUILD/openbabel-2.3.2/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_tetranonplanar.dir/link.txt --verbose=1 >/usr/bin/c++ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro CMakeFiles/test_tetranonplanar.dir/tetranonplanartest.o -o ../bin/test_tetranonplanar -rdynamic ../lib/libopenbabel.so.4.0.2 -lm -ldl -lz >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 99%] Built target test_tetranonplanar >make -f test/CMakeFiles/test_unitcell.dir/build.make test/CMakeFiles/test_unitcell.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/test /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/test /builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_unitcell.dir/DependInfo.cmake --color= >Dependee "/builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_unitcell.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_unitcell.dir/depend.internal". >Dependee "/builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_unitcell.dir/depend.internal". >Scanning dependencies of target test_unitcell >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f test/CMakeFiles/test_unitcell.dir/build.make test/CMakeFiles/test_unitcell.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 99%] Building CXX object test/CMakeFiles/test_unitcell.dir/unitcell.o >cd /builddir/build/BUILD/openbabel-2.3.2/test && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -DTESTDATADIR="\"/builddir/build/BUILD/openbabel-2.3.2/test/files/\"" -DFORMATDIR="\"/builddir/build/BUILD/openbabel-2.3.2/lib/\"" -o CMakeFiles/test_unitcell.dir/unitcell.o -c /builddir/build/BUILD/openbabel-2.3.2/test/unitcell.cpp >Linking CXX executable ../bin/test_uniqueid >cd /builddir/build/BUILD/openbabel-2.3.2/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_uniqueid.dir/link.txt --verbose=1 >/usr/bin/c++ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro CMakeFiles/test_uniqueid.dir/uniqueidtest.o -o ../bin/test_uniqueid -rdynamic ../lib/libopenbabel.so.4.0.2 -lm -ldl -lz >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles 94 >[ 99%] Built target test_uniqueid >make -f scripts/CMakeFiles/bindings_perl.dir/build.make scripts/CMakeFiles/bindings_perl.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/scripts /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/scripts /builddir/build/BUILD/openbabel-2.3.2/scripts/CMakeFiles/bindings_perl.dir/DependInfo.cmake --color= >Dependee "/builddir/build/BUILD/openbabel-2.3.2/scripts/CMakeFiles/bindings_perl.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/scripts/CMakeFiles/bindings_perl.dir/depend.internal". >Dependee "/builddir/build/BUILD/openbabel-2.3.2/scripts/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/scripts/CMakeFiles/bindings_perl.dir/depend.internal". >Scanning dependencies of target bindings_perl >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f scripts/CMakeFiles/bindings_perl.dir/build.make scripts/CMakeFiles/bindings_perl.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2/scripts/perl && /usr/bin/cmake -E copy /builddir/build/BUILD/openbabel-2.3.2/scripts/perl/Makefile.PL /builddir/build/BUILD/openbabel-2.3.2/scripts/perl >cd /builddir/build/BUILD/openbabel-2.3.2/scripts/perl && /usr/bin/cmake -E copy /builddir/build/BUILD/openbabel-2.3.2/scripts/perl/OpenBabel.pm /builddir/build/BUILD/openbabel-2.3.2/scripts/perl >cd /builddir/build/BUILD/openbabel-2.3.2/scripts/perl && /usr/bin/cmake -E copy /builddir/build/BUILD/openbabel-2.3.2/scripts/perl/openbabel-perl.cpp /builddir/build/BUILD/openbabel-2.3.2/scripts/perl >cd /builddir/build/BUILD/openbabel-2.3.2/scripts/perl && PERL5LIB=/builddir/build/BUILD/openbabel-2.3.2/scripts/perl/inc SRC_DIR=/builddir/build/BUILD/openbabel-2.3.2 OBJ_DIR=/builddir/build/BUILD/openbabel-2.3.2 /usr/bin/perl /builddir/build/BUILD/openbabel-2.3.2/scripts/perl/Makefile.PL >Linking CXX executable ../bin/test_tetraplanar >cd /builddir/build/BUILD/openbabel-2.3.2/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_tetraplanar.dir/link.txt --verbose=1 >/usr/bin/c++ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro CMakeFiles/test_tetraplanar.dir/tetraplanartest.o -o ../bin/test_tetraplanar -rdynamic ../lib/libopenbabel.so.4.0.2 -lm -ldl -lz >Linking CXX executable ../bin/test_stereo >cd /builddir/build/BUILD/openbabel-2.3.2/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_stereo.dir/link.txt --verbose=1 >/usr/bin/c++ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro CMakeFiles/test_stereo.dir/stereotest.o -o ../bin/test_stereo -rdynamic ../lib/libopenbabel.so.4.0.2 -lm -ldl -lz >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 99%] Built target test_tetraplanar >make -f scripts/CMakeFiles/bindings_python.dir/build.make scripts/CMakeFiles/bindings_python.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/scripts /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/scripts /builddir/build/BUILD/openbabel-2.3.2/scripts/CMakeFiles/bindings_python.dir/DependInfo.cmake --color= >Checking if your kit is complete... >Looks good >Dependee "/builddir/build/BUILD/openbabel-2.3.2/scripts/CMakeFiles/bindings_python.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/scripts/CMakeFiles/bindings_python.dir/depend.internal". >Dependee "/builddir/build/BUILD/openbabel-2.3.2/scripts/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/scripts/CMakeFiles/bindings_python.dir/depend.internal". >Generating a Unix-style Makefile >Writing Makefile for Chemistry::OpenBabel >cd /builddir/build/BUILD/openbabel-2.3.2/scripts/perl && PERL5LIB=/builddir/build/BUILD/openbabel-2.3.2/scripts/perl/inc make >make[3]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2/scripts/perl' >make[3]: warning: jobserver unavailable: using -j1. Add `+' to parent make rule. >Scanning dependencies of target bindings_python >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f scripts/CMakeFiles/bindings_python.dir/build.make scripts/CMakeFiles/bindings_python.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 99%] Building CXX object scripts/CMakeFiles/bindings_python.dir/python/openbabel-python.cpp.o >cd /builddir/build/BUILD/openbabel-2.3.2/scripts && /usr/bin/c++ -DHAVE_EIGEN -DHAVE_EIGEN3 -DHAVE_LIBZ -DHAVE_SHARED_POINTER -DHAVE_WXWIDGETS -DUSING_DYNAMIC_LIBS -D_FILE_OFFSET_BITS=64 -D_LARGE_FILES -D__WXGTK__ -Dbindings_python_EXPORTS -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -fPIC -isystem /usr/lib/wx/include/gtk2-unicode-release-2.8 -isystem /usr/include/wx-2.8 -I/builddir/build/BUILD/openbabel-2.3.2/include -I/builddir/build/BUILD/openbabel-2.3.2/data -I/usr/include/eigen3 -I/usr/include/python2.7 -I/usr/lib/perl5/CORE -DOB_MODULE_PATH="\"/usr/lib/openbabel\"" -o CMakeFiles/bindings_python.dir/python/openbabel-python.cpp.o -c /builddir/build/BUILD/openbabel-2.3.2/scripts/python/openbabel-python.cpp >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 99%] Built target test_stereo >make -f scripts/CMakeFiles/bindings_ruby.dir/build.make scripts/CMakeFiles/bindings_ruby.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/scripts /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/scripts /builddir/build/BUILD/openbabel-2.3.2/scripts/CMakeFiles/bindings_ruby.dir/DependInfo.cmake --color= >Dependee "/builddir/build/BUILD/openbabel-2.3.2/scripts/CMakeFiles/bindings_ruby.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/scripts/CMakeFiles/bindings_ruby.dir/depend.internal". >Dependee "/builddir/build/BUILD/openbabel-2.3.2/scripts/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/openbabel-2.3.2/scripts/CMakeFiles/bindings_ruby.dir/depend.internal". >Scanning dependencies of target bindings_ruby >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f scripts/CMakeFiles/bindings_ruby.dir/build.make scripts/CMakeFiles/bindings_ruby.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2/scripts/ruby && /usr/bin/ruby /builddir/build/BUILD/openbabel-2.3.2/scripts/ruby/extconf.rb --with-openbabel-lib=/builddir/build/BUILD/openbabel-2.3.2/lib --with-openbabel-include=/builddir/build/BUILD/openbabel-2.3.2/include >/builddir/build/BUILD/openbabel-2.3.2/scripts/ruby/extconf.rb:7:in `<main>': Use RbConfig instead of obsolete and deprecated Config. >/builddir/build/BUILD/openbabel-2.3.2/scripts/ruby/extconf.rb:7:in `<main>': Use RbConfig instead of obsolete and deprecated Config. >checking for inchi_api.h in /usr/include/inchi,/usr/include,/builddir/build/BUILD/openbabel-2.3.2/scripts/ruby/../../include... yes >checking for main() in -lopenbabel... cp OpenBabel.pm blib/lib/Chemistry/OpenBabel.pm >Running Mkbootstrap for Chemistry::OpenBabel () >chmod 644 OpenBabel.bs >g++ -c -I../../include -I/builddir/build/BUILD/openbabel-2.3.2/include -D_REENTRANT -D_GNU_SOURCE -fwrapv -fno-strict-aliasing -pipe -fstack-protector -I/usr/local/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -DVERSION=\"1.5.0\" -DXS_VERSION=\"1.5.0\" -fPIC "-I/usr/lib/perl5/CORE" openbabel-perl.cpp >yes >creating Makefile >cd /builddir/build/BUILD/openbabel-2.3.2/scripts/ruby && sed -i -e "\@^RUBYARCHDIR@s|sitearchdir|vendorarchdir|" /builddir/build/BUILD/openbabel-2.3.2/scripts/ruby/Makefile >cd /builddir/build/BUILD/openbabel-2.3.2/scripts/ruby && /usr/bin/cmake -E echo Compiling\ Ruby\ bindings >Compiling Ruby bindings >cd /builddir/build/BUILD/openbabel-2.3.2/scripts/ruby && make >make[3]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2/scripts/ruby' >make[3]: warning: jobserver unavailable: using -j1. Add `+' to parent make rule. >g++ -I. -I/usr/include -I/usr/include/ruby/backward -I/usr/include -I/builddir/build/BUILD/openbabel-2.3.2/scripts/ruby -I/builddir/build/BUILD/openbabel-2.3.2/include -D_FILE_OFFSET_BITS=64 -fPIC -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -o openbabel-ruby.o -c openbabel-ruby.cpp >Linking CXX executable ../bin/test_unitcell >cd /builddir/build/BUILD/openbabel-2.3.2/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_unitcell.dir/link.txt --verbose=1 >/usr/bin/c++ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro CMakeFiles/test_unitcell.dir/unitcell.o -o ../bin/test_unitcell -rdynamic ../lib/libopenbabel.so.4.0.2 -lm -ldl -lz >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 99%] Built target test_unitcell >openbabel-ruby.cpp: In function 'void SWIG_Ruby_define_class(swig_type_info*)': >openbabel-ruby.cpp:1517:9: warning: variable 'klass' set but not used [-Wunused-but-set-variable] > VALUE klass; > ^ >openbabel-ruby.cpp: In function 'VALUE std_vector_Sl_int_Sg____getitem____SWIG_2(const std::vector<int>*, VALUE)': >openbabel-ruby.cpp:4410:13: warning: unused variable 'r' [-Wunused-variable] > VALUE r = Qnil; > ^ >openbabel-ruby.cpp: In function 'VALUE std_vector_Sl_unsigned_SS_int_Sg____getitem____SWIG_2(const std::vector<unsigned int>*, VALUE)': >openbabel-ruby.cpp:4768:13: warning: unused variable 'r' [-Wunused-variable] > VALUE r = Qnil; > ^ >openbabel-ruby.cpp: In function 'VALUE std_vector_Sl_std_vector_Sl_int_Sg__Sg____getitem____SWIG_2(const std::vector<std::vector<int> >*, VALUE)': >openbabel-ruby.cpp:5076:13: warning: unused variable 'r' [-Wunused-variable] > VALUE r = Qnil; > ^ >openbabel-ruby.cpp: In function 'VALUE SWIG_AUX_NUM2DBL(VALUE*)': >openbabel-ruby.cpp:5158:9: warning: unused variable 'type' [-Wunused-variable] > VALUE type = TYPE(obj); > ^ >openbabel-ruby.cpp: In function 'VALUE std_vector_Sl_double_Sg____getitem____SWIG_2(const std::vector<double>*, VALUE)': >openbabel-ruby.cpp:5398:13: warning: unused variable 'r' [-Wunused-variable] > VALUE r = Qnil; > ^ >openbabel-ruby.cpp: In function 'VALUE std_vector_Sl_std_string_Sg____getitem____SWIG_2(const std::vector<std::basic_string<char> >*, VALUE)': >openbabel-ruby.cpp:5854:13: warning: unused variable 'r' [-Wunused-variable] > VALUE r = Qnil; > ^ >openbabel-ruby.cpp: In function 'VALUE std_vector_Sl_OpenBabel_vector3_Sg____getitem____SWIG_2(const std::vector<OpenBabel::vector3>*, VALUE)': >openbabel-ruby.cpp:6170:13: warning: unused variable 'r' [-Wunused-variable] > VALUE r = Qnil; > ^ >openbabel-ruby.cpp: In function 'VALUE std_vector_Sl_OpenBabel_OBMol_Sg____getitem____SWIG_2(const std::vector<OpenBabel::OBMol>*, VALUE)': >openbabel-ruby.cpp:6448:13: warning: unused variable 'r' [-Wunused-variable] > VALUE r = Qnil; > ^ >openbabel-ruby.cpp: In function 'VALUE std_vector_Sl_OpenBabel_OBBond_Sg____getitem____SWIG_2(const std::vector<OpenBabel::OBBond, std::allocator<OpenBabel::OBBond> >*, VALUE)': >openbabel-ruby.cpp:6726:13: warning: unused variable 'r' [-Wunused-variable] > VALUE r = Qnil; > ^ >openbabel-ruby.cpp: In function 'VALUE std_vector_Sl_OpenBabel_OBResidue_Sg____getitem____SWIG_2(const std::vector<OpenBabel::OBResidue, std::allocator<OpenBabel::OBResidue> >*, VALUE)': >openbabel-ruby.cpp:7004:13: warning: unused variable 'r' [-Wunused-variable] > VALUE r = Qnil; > ^ >openbabel-ruby.cpp: In function 'VALUE std_vector_Sl_OpenBabel_OBRing_Sg____getitem____SWIG_2(const std::vector<OpenBabel::OBRing, std::allocator<OpenBabel::OBRing> >*, VALUE)': >openbabel-ruby.cpp:7282:13: warning: unused variable 'r' [-Wunused-variable] > VALUE r = Qnil; > ^ >openbabel-ruby.cpp: In function 'VALUE std_vector_Sl_OpenBabel_OBRing_Sm__Sg____getitem____SWIG_2(const std::vector<OpenBabel::OBRing*>*, VALUE)': >openbabel-ruby.cpp:7552:13: warning: unused variable 'r' [-Wunused-variable] > VALUE r = Qnil; > ^ >openbabel-ruby.cpp: In function 'VALUE std_vector_Sl_OpenBabel_OBGenericData_Sm__Sg____getitem____SWIG_2(const std::vector<OpenBabel::OBGenericData*>*, VALUE)': >openbabel-ruby.cpp:7830:13: warning: unused variable 'r' [-Wunused-variable] > VALUE r = Qnil; > ^ >openbabel-ruby.cpp: In function 'VALUE _wrap_ConstIterator_next(int, VALUE*, VALUE)': >openbabel-ruby.cpp:8259:97: warning: variable 'argv' set but not used [-Wunused-but-set-variable] > SWIGINTERN VALUE _wrap_ConstIterator_next(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[3]; int ii; > ^ >openbabel-ruby.cpp: In function 'VALUE _wrap_ConstIterator_previous(int, VALUE*, VALUE)': >openbabel-ruby.cpp:8286:101: warning: variable 'argv' set but not used [-Wunused-but-set-variable] > SWIGINTERN VALUE _wrap_ConstIterator_previous(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[3]; int ii; > ^ >openbabel-ruby.cpp: In function 'VALUE _wrap_Iterator_next(int, VALUE*, VALUE)': >openbabel-ruby.cpp:8428:92: warning: variable 'argv' set but not used [-Wunused-but-set-variable] > SWIGINTERN VALUE _wrap_Iterator_next(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[3]; int ii; argc = nargs + 1; > ^ >openbabel-ruby.cpp: In function 'VALUE _wrap_Iterator_previous(int, VALUE*, VALUE)': >openbabel-ruby.cpp:8452:96: warning: variable 'argv' set but not used [-Wunused-but-set-variable] > SWIGINTERN VALUE _wrap_Iterator_previous(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[3]; int ii; > ^ >openbabel-ruby.cpp: In function 'VALUE _wrap_VectorInt___setitem__(int, VALUE*, VALUE)': >openbabel-ruby.cpp:8894:100: warning: variable 'argv' set but not used [-Wunused-but-set-variable] > SWIGINTERN VALUE _wrap_VectorInt___setitem__(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[5]; int ii; > ^ >openbabel-ruby.cpp: In function 'VALUE _wrap_VectorUnsignedInt___setitem__(int, VALUE*, VALUE)': >openbabel-ruby.cpp:9396:108: warning: variable 'argv' set but not used [-Wunused-but-set-variable] > SWIGINTERN VALUE _wrap_VectorUnsignedInt___setitem__(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[5]; int ii; > ^ >openbabel-ruby.cpp: In function 'VALUE _wrap_VectorVInt___setitem__(int, VALUE*, VALUE)': >openbabel-ruby.cpp:9940:101: warning: variable 'argv' set but not used [-Wunused-but-set-variable] > SWIGINTERN VALUE _wrap_VectorVInt___setitem__(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[5]; int ii; > ^ >openbabel-ruby.cpp: In function 'VALUE _wrap_VectorDouble___setitem__(int, VALUE*, VALUE)': >openbabel-ruby.cpp:10428:103: warning: variable 'argv' set but not used [-Wunused-but-set-variable] > SWIGINTERN VALUE _wrap_VectorDouble___setitem__(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[5]; int ii; > ^ >openbabel-ruby.cpp: In function 'VALUE _wrap_VectorString___setitem__(int, VALUE*, VALUE)': >openbabel-ruby.cpp:10942:103: warning: variable 'argv' set but not used [-Wunused-but-set-variable] > SWIGINTERN VALUE _wrap_VectorString___setitem__(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[5]; int ii; > ^ >openbabel-ruby.cpp: In function 'VALUE _wrap_VectorVector3___setitem__(int, VALUE*, VALUE)': >openbabel-ruby.cpp:11480:104: warning: variable 'argv' set but not used [-Wunused-but-set-variable] > SWIGINTERN VALUE _wrap_VectorVector3___setitem__(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[5]; int ii; > ^ >openbabel-ruby.cpp: In function 'VALUE _wrap_VectorOBMol___setitem__(int, VALUE*, VALUE)': >openbabel-ruby.cpp:11986:102: warning: variable 'argv' set but not used [-Wunused-but-set-variable] > SWIGINTERN VALUE _wrap_VectorOBMol___setitem__(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[5]; int ii; > ^ >openbabel-ruby.cpp: In function 'VALUE _wrap_VectorOBBond___setitem__(int, VALUE*, VALUE)': >openbabel-ruby.cpp:12491:103: warning: variable 'argv' set but not used [-Wunused-but-set-variable] > SWIGINTERN VALUE _wrap_VectorOBBond___setitem__(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[5]; int ii; > ^ >openbabel-ruby.cpp: In function 'VALUE _wrap_VectorOBResidue___setitem__(int, VALUE*, VALUE)': >openbabel-ruby.cpp:12998:106: warning: variable 'argv' set but not used [-Wunused-but-set-variable] > SWIGINTERN VALUE _wrap_VectorOBResidue___setitem__(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[5]; int ii; > ^ >openbabel-ruby.cpp: In function 'VALUE _wrap_VectorOBRing___setitem__(int, VALUE*, VALUE)': >openbabel-ruby.cpp:13505:103: warning: variable 'argv' set but not used [-Wunused-but-set-variable] > SWIGINTERN VALUE _wrap_VectorOBRing___setitem__(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[5]; int ii; > ^ >openbabel-ruby.cpp: In function 'VALUE _wrap_VectorpOBRing___setitem__(int, VALUE*, VALUE)': >openbabel-ruby.cpp:14010:104: warning: variable 'argv' set but not used [-Wunused-but-set-variable] > SWIGINTERN VALUE _wrap_VectorpOBRing___setitem__(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[5]; int ii; > ^ >openbabel-ruby.cpp: In function 'VALUE _wrap_VectorpOBGenericData___setitem__(int, VALUE*, VALUE)': >openbabel-ruby.cpp:14525:111: warning: variable 'argv' set but not used [-Wunused-but-set-variable] > SWIGINTERN VALUE _wrap_VectorpOBGenericData___setitem__(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[5]; int ii; > ^ >openbabel-ruby.cpp: In function 'VALUE _wrap_new_OBElement(int, VALUE*, VALUE)': >openbabel-ruby.cpp:14955:92: warning: variable 'argv' set but not used [-Wunused-but-set-variable] > SWIGINTERN VALUE _wrap_new_OBElement(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[14]; int ii; argc = nargs; > ^ >openbabel-ruby.cpp: In function 'VALUE _wrap_OBElementTable_corrected_bond_rad(int, VALUE*, VALUE)': >openbabel-ruby.cpp:15226:112: warning: variable 'argv' set but not used [-Wunused-but-set-variable] > SWIGINTERN VALUE _wrap_OBElementTable_corrected_bond_rad(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[4]; int ii; > ^ >openbabel-ruby.cpp: In function 'VALUE _wrap_OBElementTable_corrected_vdw_rad(int, VALUE*, VALUE)': >openbabel-ruby.cpp:15257:111: warning: variable 'argv' set but not used [-Wunused-but-set-variable] > SWIGINTERN VALUE _wrap_OBElementTable_corrected_vdw_rad(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[4]; int ii; > ^ >openbabel-ruby.cpp: In function 'VALUE _wrap_OBIsotopeTable_get_exact_mass(int, VALUE*, VALUE)': >openbabel-ruby.cpp:15386:108: warning: variable 'argv' set but not used [-Wunused-but-set-variable] > SWIGINTERN VALUE _wrap_OBIsotopeTable_get_exact_mass(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[4]; int ii; > ^ >openbabel-ruby.cpp: In function 'VALUE _wrap_OBResidueData_lookup_bo(int, VALUE*, VALUE)': >openbabel-ruby.cpp:15575:102: warning: variable 'argv' set but not used [-Wunused-but-set-variable] > SWIGINTERN VALUE _wrap_OBResidueData_lookup_bo(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[4]; int ii; > ^ >openbabel-ruby.cpp: In function 'VALUE _wrap_new_OBRandom(int, VALUE*, VALUE)': >openbabel-ruby.cpp:15740:91: warning: variable 'argv' set but not used [-Wunused-but-set-variable] > SWIGINTERN VALUE _wrap_new_OBRandom(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[1]; int ii; argc = nargs; > ^ >openbabel-ruby.cpp: In function 'VALUE _wrap_new_OBSqrtTbl(int, VALUE*, VALUE)': >openbabel-ruby.cpp:15844:92: warning: variable 'argv' set but not used [-Wunused-but-set-variable] > SWIGINTERN VALUE _wrap_new_OBSqrtTbl(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[2]; int ii; argc = nargs; > ^ >openbabel-ruby.cpp: In function 'VALUE _wrap_Vector3_set(int, VALUE*, VALUE)': >openbabel-ruby.cpp:16003:90: warning: variable 'argv' set but not used [-Wunused-but-set-variable] > SWIGINTERN VALUE _wrap_Vector3_set(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[5]; int ii; argc = nargs + 1; > ^ >openbabel-ruby.cpp: In function 'VALUE _wrap_Vector3_random_unit_vector(int, VALUE*, VALUE)': >openbabel-ruby.cpp:16130:105: warning: variable 'argv' set but not used [-Wunused-but-set-variable] > SWIGINTERN VALUE _wrap_Vector3_random_unit_vector(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[3]; int ii; > ^ >openbabel-ruby.cpp: In function 'VALUE _wrap_Vector3_x(int, VALUE*, VALUE)': >openbabel-ruby.cpp:16207:88: warning: variable 'argv' set but not used [-Wunused-but-set-variable] > SWIGINTERN VALUE _wrap_Vector3_x(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[2]; int ii; argc = nargs + 1; > ^ >openbabel-ruby.cpp: In function 'VALUE _wrap_Vector3_y(int, VALUE*, VALUE)': >openbabel-ruby.cpp:16220:88: warning: variable 'argv' set but not used [-Wunused-but-set-variable] > SWIGINTERN VALUE _wrap_Vector3_y(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[2]; int ii; argc = nargs + 1; > ^ >openbabel-ruby.cpp: In function 'VALUE _wrap_Vector3_z(int, VALUE*, VALUE)': >openbabel-ruby.cpp:16233:88: warning: variable 'argv' set but not used [-Wunused-but-set-variable] > SWIGINTERN VALUE _wrap_Vector3_z(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[2]; int ii; argc = nargs + 1; > ^ >openbabel-ruby.cpp: In function 'VALUE _wrap___sub__(int, VALUE*, VALUE)': >openbabel-ruby.cpp:16391:86: warning: variable 'argv' set but not used [-Wunused-but-set-variable] > SWIGINTERN VALUE _wrap___sub__(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[2]; int ii; argc = nargs; > ^ >openbabel-ruby.cpp: In function 'VALUE _wrap_Matrix3x3___call__(int, VALUE*, VALUE)': >openbabel-ruby.cpp:16744:97: warning: variable 'argv' set but not used [-Wunused-but-set-variable] > SWIGINTERN VALUE _wrap_Matrix3x3___call__(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[4]; int ii; > ^ >openbabel-ruby.cpp: In function 'VALUE _wrap_new_OBGenericData(int, VALUE*, VALUE)': >openbabel-ruby.cpp:17044:96: warning: variable 'argv' set but not used [-Wunused-but-set-variable] > SWIGINTERN VALUE _wrap_new_OBGenericData(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[3]; int ii; argc = nargs; > ^ >openbabel-ruby.cpp: In function 'VALUE _wrap_OBBase_get_title(int, VALUE*, VALUE)': >openbabel-ruby.cpp:17186:95: warning: variable 'argv' set but not used [-Wunused-but-set-variable] > SWIGINTERN VALUE _wrap_OBBase_get_title(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[3]; int ii; argc = nargs + 1; > ^ >openbabel-ruby.cpp: In function 'VALUE _wrap_new_OBCommentData(int, VALUE*, VALUE)': >openbabel-ruby.cpp:17474:96: warning: variable 'argv' set but not used [-Wunused-but-set-variable] > SWIGINTERN VALUE _wrap_new_OBCommentData(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[1]; int ii; argc = nargs; > ^ >openbabel-ruby.cpp: In function 'VALUE _wrap_new_OBExternalBond(int, VALUE*, VALUE)': >openbabel-ruby.cpp:17565:97: warning: variable 'argv' set but not used [-Wunused-but-set-variable] > SWIGINTERN VALUE _wrap_new_OBExternalBond(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[3]; int ii; argc = nargs; > ^ >openbabel-ruby.cpp: In function 'VALUE _wrap_new_OBVirtualBond(int, VALUE*, VALUE)': >openbabel-ruby.cpp:17896:96: warning: variable 'argv' set but not used [-Wunused-but-set-variable] > SWIGINTERN VALUE _wrap_new_OBVirtualBond(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[4]; int ii; argc = nargs; > ^ >openbabel-ruby.cpp: In function 'VALUE _wrap_new_OBRingData(int, VALUE*, VALUE)': >openbabel-ruby.cpp:17965:93: warning: variable 'argv' set but not used [-Wunused-but-set-variable] > SWIGINTERN VALUE _wrap_new_OBRingData(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[1]; int ii; argc = nargs; > ^ >openbabel-ruby.cpp: In function 'VALUE _wrap_new_OBUnitCell(int, VALUE*, VALUE)': >openbabel-ruby.cpp:18089:93: warning: variable 'argv' set but not used [-Wunused-but-set-variable] > SWIGINTERN VALUE _wrap_new_OBUnitCell(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[1]; int ii; argc = nargs; > ^ >openbabel-ruby.cpp: In function 'VALUE _wrap_OBUnitCell_set_data(int, VALUE*, VALUE)': >openbabel-ruby.cpp:18157:98: warning: variable 'argv' set but not used [-Wunused-but-set-variable] > SWIGINTERN VALUE _wrap_OBUnitCell_set_data(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[8]; int ii; > ^ >openbabel-ruby.cpp: In function 'VALUE _wrap_OBUnitCell_get_lattice_type(int, VALUE*, VALUE)': >openbabel-ruby.cpp:18331:106: warning: variable 'argv' set but not used [-Wunused-but-set-variable] > SWIGINTERN VALUE _wrap_OBUnitCell_get_lattice_type(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[3]; int ii; > ^ >openbabel-ruby.cpp: In function 'VALUE _wrap_OBUnitCell_get_space_group_number(int, VALUE*, VALUE)': >openbabel-ruby.cpp:18457:112: warning: variable 'argv' set but not used [-Wunused-but-set-variable] > SWIGINTERN VALUE _wrap_OBUnitCell_get_space_group_number(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[3]; int ii; > ^ >openbabel-ruby.cpp: In function 'VALUE _wrap_new_OBConformerData(int, VALUE*, VALUE)': >openbabel-ruby.cpp:18498:98: warning: variable 'argv' set but not used [-Wunused-but-set-variable] > SWIGINTERN VALUE _wrap_new_OBConformerData(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[1]; int ii; argc = nargs; > ^ >openbabel-ruby.cpp: In function 'VALUE _wrap_new_OBSymmetryData(int, VALUE*, VALUE)': >openbabel-ruby.cpp:18677:97: warning: variable 'argv' set but not used [-Wunused-but-set-variable] > SWIGINTERN VALUE _wrap_new_OBSymmetryData(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[1]; int ii; argc = nargs; > ^ >openbabel-ruby.cpp: In function 'VALUE _wrap_OBSymmetryData_set_data(int, VALUE*, VALUE)': >openbabel-ruby.cpp:18709:102: warning: variable 'argv' set but not used [-Wunused-but-set-variable] > SWIGINTERN VALUE _wrap_OBSymmetryData_set_data(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[4]; int ii; > ^ >openbabel-ruby.cpp: In function 'VALUE _wrap_new_OBTorsion(int, VALUE*, VALUE)': >openbabel-ruby.cpp:18772:92: warning: variable 'argv' set but not used [-Wunused-but-set-variable] > SWIGINTERN VALUE _wrap_new_OBTorsion(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[1]; int ii; argc = nargs; > ^ >openbabel-ruby.cpp: In function 'VALUE _wrap_OBTorsion_add_torsion(int, VALUE*, VALUE)': >openbabel-ruby.cpp:18834:100: warning: variable 'argv' set but not used [-Wunused-but-set-variable] > SWIGINTERN VALUE _wrap_OBTorsion_add_torsion(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[6]; int ii; > ^ >openbabel-ruby.cpp: In function 'VALUE _wrap_OBTorsion_set_angle(int, VALUE*, VALUE)': >openbabel-ruby.cpp:18866:98: warning: variable 'argv' set but not used [-Wunused-but-set-variable] > SWIGINTERN VALUE _wrap_OBTorsion_set_angle(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[4]; int ii; > ^ >openbabel-ruby.cpp: In function 'VALUE _wrap_OBTorsion_get_angle(int, VALUE*, VALUE)': >openbabel-ruby.cpp:18910:98: warning: variable 'argv' set but not used [-Wunused-but-set-variable] > SWIGINTERN VALUE _wrap_OBTorsion_get_angle(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[4]; int ii; > ^ >openbabel-ruby.cpp: In function 'VALUE _wrap_new_OBAngle(int, VALUE*, VALUE)': >openbabel-ruby.cpp:19040:90: warning: variable 'argv' set but not used [-Wunused-but-set-variable] > SWIGINTERN VALUE _wrap_new_OBAngle(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[1]; int ii; argc = nargs; > ^ >openbabel-ruby.cpp: In function 'VALUE _wrap_OBAngle_set_atoms(int, VALUE*, VALUE)': >openbabel-ruby.cpp:19125:96: warning: variable 'argv' set but not used [-Wunused-but-set-variable] > SWIGINTERN VALUE _wrap_OBAngle_set_atoms(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[5]; int ii; > ^ >openbabel-ruby.cpp: In function 'VALUE _wrap_OBAngleData_fill_angle_array(int, VALUE*, VALUE)': >openbabel-ruby.cpp:19175:107: warning: variable 'argv' set but not used [-Wunused-but-set-variable] > SWIGINTERN VALUE _wrap_OBAngleData_fill_angle_array(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[4]; int ii; > ^ >openbabel-ruby.cpp: In function 'VALUE _wrap_new_OBChiralData(int, VALUE*, VALUE)': >openbabel-ruby.cpp:19233:95: warning: variable 'argv' set but not used [-Wunused-but-set-variable] > SWIGINTERN VALUE _wrap_new_OBChiralData(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[1]; int ii; argc = nargs; > ^ >openbabel-perl.cpp: In function 'int SWIG_AsVal_unsigned_SS_long(SV*, long unsigned int*)': >openbabel-perl.cpp:1903:21: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] > if (v >= 0 && v <= ULONG_MAX) { > ^ >openbabel-ruby.cpp: In function 'VALUE _wrap_new_OBSerialNums(int, VALUE*, VALUE)': >openbabel-ruby.cpp:19340:95: warning: variable 'argv' set but not used [-Wunused-but-set-variable] > SWIGINTERN VALUE _wrap_new_OBSerialNums(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[1]; int ii; argc = nargs; > ^ >openbabel-ruby.cpp: In function 'VALUE _wrap_OBVibrationData_set_data(int, VALUE*, VALUE)': >openbabel-ruby.cpp:19465:103: warning: variable 'argv' set but not used [-Wunused-but-set-variable] > SWIGINTERN VALUE _wrap_OBVibrationData_set_data(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[6]; int ii; > ^ >openbabel-ruby.cpp: In function 'VALUE _wrap_OBOrbital_set_data(int, VALUE*, VALUE)': >openbabel-ruby.cpp:19648:97: warning: variable 'argv' set but not used [-Wunused-but-set-variable] > SWIGINTERN VALUE _wrap_OBOrbital_set_data(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[5]; int ii; > ^ >openbabel-ruby.cpp: In function 'VALUE _wrap_OBOrbitalData_set_homo(int, VALUE*, VALUE)': >openbabel-ruby.cpp:19771:101: warning: variable 'argv' set but not used [-Wunused-but-set-variable] > SWIGINTERN VALUE _wrap_OBOrbitalData_set_homo(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[4]; int ii; > ^ >openbabel-ruby.cpp: In function 'VALUE _wrap_OBVectorData_set_data(int, VALUE*, VALUE)': >openbabel-ruby.cpp:20128:100: warning: variable 'argv' set but not used [-Wunused-but-set-variable] > SWIGINTERN VALUE _wrap_OBVectorData_set_data(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[5]; int ii; > ^ >openbabel-ruby.cpp: In function 'VALUE _wrap_OBGridData_get_number_of_points(int, VALUE*, VALUE)': >openbabel-ruby.cpp:20316:110: warning: variable 'argv' set but not used [-Wunused-but-set-variable] > SWIGINTERN VALUE _wrap_OBGridData_get_number_of_points(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[5]; int ii; > ^ >openbabel-ruby.cpp: In function 'VALUE _wrap_OBGridData_get_value(int, VALUE*, VALUE)': >openbabel-ruby.cpp:20370:99: warning: variable 'argv' set but not used [-Wunused-but-set-variable] > SWIGINTERN VALUE _wrap_OBGridData_get_value(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[5]; int ii; > ^ >openbabel-ruby.cpp: In function 'VALUE _wrap_OBGridData_get_origin_vector(int, VALUE*, VALUE)': >openbabel-ruby.cpp:20422:107: warning: variable 'argv' set but not used [-Wunused-but-set-variable] > SWIGINTERN VALUE _wrap_OBGridData_get_origin_vector(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[3]; int ii; > ^ >openbabel-ruby.cpp: In function 'VALUE _wrap_OBPlugin_display(int, VALUE*, VALUE)': >openbabel-ruby.cpp:20711:95: warning: variable 'argv' set but not used [-Wunused-but-set-variable] > SWIGINTERN VALUE _wrap_OBPlugin_display(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[5]; int ii; argc = nargs + 1; > ^ >openbabel-ruby.cpp: In function 'VALUE _wrap_OBPlugin_list(int, VALUE*, VALUE)': >openbabel-ruby.cpp:20811:92: warning: variable 'argv' set but not used [-Wunused-but-set-variable] > SWIGINTERN VALUE _wrap_OBPlugin_list(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[3]; int ii; argc = nargs; > ^ >openbabel-ruby.cpp: In function 'VALUE _wrap_OBPlugin_list_as_string(int, VALUE*, VALUE)': >openbabel-ruby.cpp:20839:102: warning: variable 'argv' set but not used [-Wunused-but-set-variable] > SWIGINTERN VALUE _wrap_OBPlugin_list_as_string(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[2]; int ii; > ^ >openbabel-ruby.cpp: In function 'VALUE _wrap_new_OBError(int, VALUE*, VALUE)': >openbabel-ruby.cpp:21049:90: warning: variable 'argv' set but not used [-Wunused-but-set-variable] > SWIGINTERN VALUE _wrap_new_OBError(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[6]; int ii; argc = nargs; > ^ >openbabel-ruby.cpp: In function 'VALUE _wrap_OBFormat_register_format(int, VALUE*, VALUE)': >openbabel-ruby.cpp:21612:103: warning: variable 'argv' set but not used [-Wunused-but-set-variable] > SWIGINTERN VALUE _wrap_OBFormat_register_format(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[4]; int ii; > ^ >openbabel-ruby.cpp: In function 'VALUE _wrap_OBFormat_display(int, VALUE*, VALUE)': >openbabel-ruby.cpp:21658:95: warning: variable 'argv' set but not used [-Wunused-but-set-variable] > SWIGINTERN VALUE _wrap_OBFormat_display(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[5]; int ii; argc = nargs + 1; > ^ >openbabel-ruby.cpp: In function 'VALUE _wrap_OBConversion_register_format(int, VALUE*, VALUE)': >openbabel-ruby.cpp:21765:107: warning: variable 'argv' set but not used [-Wunused-but-set-variable] > SWIGINTERN VALUE _wrap_OBConversion_register_format(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[3]; int ii; > ^ >openbabel-ruby.cpp: In function 'VALUE _wrap_OBConversion_is_option(int, VALUE*, VALUE)': >openbabel-ruby.cpp:22099:101: warning: variable 'argv' set but not used [-Wunused-but-set-variable] > SWIGINTERN VALUE _wrap_OBConversion_is_option(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[4]; int ii; > ^ >openbabel-ruby.cpp: In function 'VALUE _wrap_OBConversion_add_option(int, VALUE*, VALUE)': >openbabel-ruby.cpp:22164:102: warning: variable 'argv' set but not used [-Wunused-but-set-variable] > SWIGINTERN VALUE _wrap_OBConversion_add_option(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[5]; int ii; > ^ >openbabel-ruby.cpp: In function 'VALUE _wrap_OBConversion_register_option_param(int, VALUE*, VALUE)': >openbabel-ruby.cpp:22239:113: warning: variable 'argv' set but not used [-Wunused-but-set-variable] > SWIGINTERN VALUE _wrap_OBConversion_register_option_param(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[4]; int ii; > ^ >openbabel-ruby.cpp: In function 'VALUE _wrap_OBConversion_copy_options(int, VALUE*, VALUE)': >openbabel-ruby.cpp:22283:104: warning: variable 'argv' set but not used [-Wunused-but-set-variable] > SWIGINTERN VALUE _wrap_OBConversion_copy_options(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[4]; int ii; > ^ >openbabel-ruby.cpp: In function 'VALUE _wrap_OBConversion_convert(int, VALUE*, VALUE)': >openbabel-ruby.cpp:22331:99: warning: variable 'argv' set but not used [-Wunused-but-set-variable] > SWIGINTERN VALUE _wrap_OBConversion_convert(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[4]; int ii; > ^ >openbabel-ruby.cpp: In function 'VALUE _wrap_OBConversion_set_first_input(int, VALUE*, VALUE)': >openbabel-ruby.cpp:22416:107: warning: variable 'argv' set but not used [-Wunused-but-set-variable] > SWIGINTERN VALUE _wrap_OBConversion_set_first_input(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[3]; int ii; > ^ >openbabel-ruby.cpp: In function 'VALUE _wrap_OBConversion_set_one_object_only(int, VALUE*, VALUE)': >openbabel-ruby.cpp:22461:111: warning: variable 'argv' set but not used [-Wunused-but-set-variable] > SWIGINTERN VALUE _wrap_OBConversion_set_one_object_only(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[3]; int ii; > ^ >openbabel-ruby.cpp: In function 'VALUE _wrap_OBConversion_write(int, VALUE*, VALUE)': >openbabel-ruby.cpp:22525:97: warning: variable 'argv' set but not used [-Wunused-but-set-variable] > SWIGINTERN VALUE _wrap_OBConversion_write(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[4]; int ii; > ^ >openbabel-ruby.cpp: In function 'VALUE _wrap_OBConversion_write_string(int, VALUE*, VALUE)': >openbabel-ruby.cpp:22557:104: warning: variable 'argv' set but not used [-Wunused-but-set-variable] > SWIGINTERN VALUE _wrap_OBConversion_write_string(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[4]; int ii; > ^ >openbabel-ruby.cpp: In function 'VALUE _wrap_OBConversion_read(int, VALUE*, VALUE)': >openbabel-ruby.cpp:22610:96: warning: variable 'argv' set but not used [-Wunused-but-set-variable] > SWIGINTERN VALUE _wrap_OBConversion_read(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[4]; int ii; > ^ >openbabel-ruby.cpp: In function 'VALUE _wrap_OBConversion_report_number_converted(int, VALUE*, VALUE)': >openbabel-ruby.cpp:22683:115: warning: variable 'argv' set but not used [-Wunused-but-set-variable] > SWIGINTERN VALUE _wrap_OBConversion_report_number_converted(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[4]; > ^ >openbabel-ruby.cpp: In function 'VALUE _wrap_new_OBResidue(int, VALUE*, VALUE)': >openbabel-ruby.cpp:22723:92: warning: variable 'argv' set but not used [-Wunused-but-set-variable] > SWIGINTERN VALUE _wrap_new_OBResidue(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[1]; int ii; argc = nargs; > ^ >openbabel-ruby.cpp: In function 'VALUE _wrap_OBResidue_get_bonds(int, VALUE*, VALUE)': >openbabel-ruby.cpp:22968:98: warning: variable 'argv' set but not used [-Wunused-but-set-variable] > SWIGINTERN VALUE _wrap_OBResidue_get_bonds(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[3]; int ii; > ^ >openbabel-ruby.cpp: In function 'VALUE _wrap_new_OBInternalCoord(int, VALUE*, VALUE)': >openbabel-ruby.cpp:23366:98: warning: variable 'argv' set but not used [-Wunused-but-set-variable] > SWIGINTERN VALUE _wrap_new_OBInternalCoord(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[6]; int ii; argc = nargs; > ^ >openbabel-ruby.cpp: In function 'VALUE _wrap_OBAtom_set_vector(int, VALUE*, VALUE)': >openbabel-ruby.cpp:23610:96: warning: variable 'argv' set but not used [-Wunused-but-set-variable] > SWIGINTERN VALUE _wrap_OBAtom_set_vector(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[5]; int ii; > ^ >openbabel-ruby.cpp: In function 'VALUE _wrap_OBAtom_get_vector(int, VALUE*, VALUE)': >openbabel-ruby.cpp:23901:96: warning: variable 'argv' set but not used [-Wunused-but-set-variable] > SWIGINTERN VALUE _wrap_OBAtom_get_vector(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[2]; int ii; > ^ >openbabel-ruby.cpp: In function 'VALUE _wrap_OBAtom_get_residue(int, VALUE*, VALUE)': >openbabel-ruby.cpp:23934:97: warning: variable 'argv' set but not used [-Wunused-but-set-variable] > SWIGINTERN VALUE _wrap_OBAtom_get_residue(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[3]; int ii; > ^ >openbabel-ruby.cpp: In function 'VALUE _wrap_OBAtom_explicit_hydrogen_count(int, VALUE*, VALUE)': >openbabel-ruby.cpp:24274:109: warning: variable 'argv' set but not used [-Wunused-but-set-variable] > SWIGINTERN VALUE _wrap_OBAtom_explicit_hydrogen_count(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[3]; int ii; > ^ >openbabel-ruby.cpp: In function 'VALUE _wrap_OBAtom_is_hydrogen(int, VALUE*, VALUE)': >openbabel-ruby.cpp:24357:97: warning: variable 'argv' set but not used [-Wunused-but-set-variable] > SWIGINTERN VALUE _wrap_OBAtom_is_hydrogen(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[2]; int ii; > ^ >openbabel-ruby.cpp: In function 'VALUE _wrap_OBAtom_has_alpha_beta_unsat(int, VALUE*, VALUE)': >openbabel-ruby.cpp:24619:106: warning: variable 'argv' set but not used [-Wunused-but-set-variable] > SWIGINTERN VALUE _wrap_OBAtom_has_alpha_beta_unsat(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[3]; int ii; > ^ >openbabel-ruby.cpp: In function 'VALUE _wrap_OBBond_set_length(int, VALUE*, VALUE)': >openbabel-ruby.cpp:24803:96: warning: variable 'argv' set but not used [-Wunused-but-set-variable] > SWIGINTERN VALUE _wrap_OBBond_set_length(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[4]; int ii; > ^ >openbabel-ruby.cpp: In function 'VALUE _wrap_OBBond_set_in_ring(int, VALUE*, VALUE)': >openbabel-ruby.cpp:24898:97: warning: variable 'argv' set but not used [-Wunused-but-set-variable] > SWIGINTERN VALUE _wrap_OBBond_set_in_ring(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[3]; int ii; > ^ >openbabel-ruby.cpp: In function 'VALUE _wrap_OBBond_get_begin_atom(int, VALUE*, VALUE)': >openbabel-ruby.cpp:25020:100: warning: variable 'argv' set but not used [-Wunused-but-set-variable] > SWIGINTERN VALUE _wrap_OBBond_get_begin_atom(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[2]; int ii; > ^ >openbabel-ruby.cpp: In function 'VALUE _wrap_OBBond_get_end_atom(int, VALUE*, VALUE)': >openbabel-ruby.cpp:25045:98: warning: variable 'argv' set but not used [-Wunused-but-set-variable] > SWIGINTERN VALUE _wrap_OBBond_get_end_atom(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[2]; int ii; > ^ >openbabel-ruby.cpp: In function 'VALUE _wrap_new_OBMol(int, VALUE*, VALUE)': >openbabel-ruby.cpp:25293:88: warning: variable 'argv' set but not used [-Wunused-but-set-variable] > SWIGINTERN VALUE _wrap_new_OBMol(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[1]; int ii; argc = nargs; > ^ >openbabel-ruby.cpp: In function 'VALUE _wrap_OBMol_add_bond(int, VALUE*, VALUE)': >openbabel-ruby.cpp:25468:93: warning: variable 'argv' set but not used [-Wunused-but-set-variable] > SWIGINTERN VALUE _wrap_OBMol_add_bond(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[7]; int ii; argc = nargs + 1; > ^ >openbabel-ruby.cpp: In function 'VALUE _wrap_OBMol_new_atom(int, VALUE*, VALUE)': >openbabel-ruby.cpp:25512:93: warning: variable 'argv' set but not used [-Wunused-but-set-variable] > SWIGINTERN VALUE _wrap_OBMol_new_atom(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[3]; int ii; argc = nargs + 1; > ^ >openbabel-ruby.cpp: In function 'VALUE _wrap_OBMol_new_bond(int, VALUE*, VALUE)': >openbabel-ruby.cpp:25538:93: warning: variable 'argv' set but not used [-Wunused-but-set-variable] > SWIGINTERN VALUE _wrap_OBMol_new_bond(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[3]; int ii; argc = nargs + 1; > ^ >openbabel-ruby.cpp: In function 'VALUE _wrap_OBMol_delete_atom(int, VALUE*, VALUE)': >openbabel-ruby.cpp:25576:96: warning: variable 'argv' set but not used [-Wunused-but-set-variable] > SWIGINTERN VALUE _wrap_OBMol_delete_atom(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[4]; int ii; > ^ >openbabel-ruby.cpp: In function 'VALUE _wrap_OBMol_delete_bond(int, VALUE*, VALUE)': >openbabel-ruby.cpp:25608:96: warning: variable 'argv' set but not used [-Wunused-but-set-variable] > SWIGINTERN VALUE _wrap_OBMol_delete_bond(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[4]; int ii; > ^ >openbabel-ruby.cpp: In function 'VALUE _wrap_OBMol_delete_residue(int, VALUE*, VALUE)': >openbabel-ruby.cpp:25640:99: warning: variable 'argv' set but not used [-Wunused-but-set-variable] > SWIGINTERN VALUE _wrap_OBMol_delete_residue(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[4]; int ii; > ^ >openbabel-ruby.cpp: In function 'VALUE _wrap_OBMol_end_modify(int, VALUE*, VALUE)': >openbabel-ruby.cpp:25667:95: warning: variable 'argv' set but not used [-Wunused-but-set-variable] > SWIGINTERN VALUE _wrap_OBMol_end_modify(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[3]; int ii; argc = nargs + 1; > ^ >openbabel-ruby.cpp: In function 'VALUE _wrap_OBMol_get_title(int, VALUE*, VALUE)': >openbabel-ruby.cpp:25715:94: warning: variable 'argv' set but not used [-Wunused-but-set-variable] > SWIGINTERN VALUE _wrap_OBMol_get_title(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[3]; int ii; argc = nargs + 1; > ^ >openbabel-ruby.cpp: In function 'VALUE _wrap_OBMol_get_spaced_formula(int, VALUE*, VALUE)': >openbabel-ruby.cpp:25995:103: warning: variable 'argv' set but not used [-Wunused-but-set-variable] > SWIGINTERN VALUE _wrap_OBMol_get_spaced_formula(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[5]; int ii; > ^ >openbabel-ruby.cpp: In function 'VALUE _wrap_OBMol_get_mol_wt(int, VALUE*, VALUE)': >openbabel-ruby.cpp:26029:95: warning: variable 'argv' set but not used [-Wunused-but-set-variable] > SWIGINTERN VALUE _wrap_OBMol_get_mol_wt(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[3]; int ii; argc = nargs + 1; > ^ >openbabel-ruby.cpp: In function 'VALUE _wrap_OBMol_get_exact_mass(int, VALUE*, VALUE)': >openbabel-ruby.cpp:26051:99: warning: variable 'argv' set but not used [-Wunused-but-set-variable] > SWIGINTERN VALUE _wrap_OBMol_get_exact_mass(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[3]; int ii; > ^ >openbabel-ruby.cpp: In function 'VALUE _wrap_OBMol_to_inertial_frame(int, VALUE*, VALUE)': >openbabel-ruby.cpp:26447:102: warning: variable 'argv' set but not used [-Wunused-but-set-variable] > SWIGINTERN VALUE _wrap_OBMol_to_inertial_frame(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[4]; int ii; > ^ >openbabel-ruby.cpp: In function 'VALUE _wrap_OBMol_translate(int, VALUE*, VALUE)': >openbabel-ruby.cpp:26480:94: warning: variable 'argv' set but not used [-Wunused-but-set-variable] > SWIGINTERN VALUE _wrap_OBMol_translate(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[4]; int ii; argc = nargs + 1; > ^ >openbabel-ruby.cpp: In function 'VALUE _wrap_OBMol_delete_hydrogens(int, VALUE*, VALUE)': >openbabel-ruby.cpp:26568:101: warning: variable 'argv' set but not used [-Wunused-but-set-variable] > SWIGINTERN VALUE _wrap_OBMol_delete_hydrogens(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[3]; int ii; > ^ >openbabel-ruby.cpp: In function 'VALUE _wrap_OBMol_strip_salts(int, VALUE*, VALUE)': >openbabel-ruby.cpp:26682:96: warning: variable 'argv' set but not used [-Wunused-but-set-variable] > SWIGINTERN VALUE _wrap_OBMol_strip_salts(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[3]; int ii; > ^ >openbabel-ruby.cpp: In function 'VALUE _wrap_OBMol_separate(int, VALUE*, VALUE)': >openbabel-ruby.cpp:26708:93: warning: variable 'argv' set but not used [-Wunused-but-set-variable] > SWIGINTERN VALUE _wrap_OBMol_separate(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[3]; int ii; argc = nargs + 1; > ^ >openbabel-ruby.cpp: In function 'VALUE _wrap_OBMol_correct_for_ph(int, VALUE*, VALUE)': >openbabel-ruby.cpp:26757:99: warning: variable 'argv' set but not used [-Wunused-but-set-variable] > SWIGINTERN VALUE _wrap_OBMol_correct_for_ph(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[3]; int ii; > ^ >openbabel-ruby.cpp: In function 'VALUE _wrap_OBMol_assign_spin_multiplicity(int, VALUE*, VALUE)': >openbabel-ruby.cpp:26780:109: warning: variable 'argv' set but not used [-Wunused-but-set-variable] > SWIGINTERN VALUE _wrap_OBMol_assign_spin_multiplicity(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[3]; int ii; > ^ >openbabel-ruby.cpp: In function 'VALUE _wrap_OBMol_center(int, VALUE*, VALUE)': >openbabel-ruby.cpp:26803:91: warning: variable 'argv' set but not used [-Wunused-but-set-variable] > SWIGINTERN VALUE _wrap_OBMol_center(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[3]; int ii; argc = nargs + 1; > ^ >openbabel-ruby.cpp: In function 'VALUE _wrap_OBMol_has_2d(int, VALUE*, VALUE)': >openbabel-ruby.cpp:27039:91: warning: variable 'argv' set but not used [-Wunused-but-set-variable] > SWIGINTERN VALUE _wrap_OBMol_has_2d(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[3]; int ii; argc = nargs + 1; > ^ >openbabel-ruby.cpp: In function 'VALUE _wrap_OBMol_get_energy(int, VALUE*, VALUE)': >openbabel-ruby.cpp:27291:95: warning: variable 'argv' set but not used [-Wunused-but-set-variable] > SWIGINTERN VALUE _wrap_OBMol_get_energy(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[3]; int ii; argc = nargs + 1; > ^ >openbabel-ruby.cpp: In function 'VALUE _wrap_new_OBSmartsPattern(int, VALUE*, VALUE)': >openbabel-ruby.cpp:28169:98: warning: variable 'argv' set but not used [-Wunused-but-set-variable] > SWIGINTERN VALUE _wrap_new_OBSmartsPattern(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[1]; int ii; argc = nargs; > ^ >openbabel-ruby.cpp: In function 'VALUE _wrap_OBSmartsPattern_get_smarts(int, VALUE*, VALUE)': >openbabel-ruby.cpp:28225:105: warning: variable 'argv' set but not used [-Wunused-but-set-variable] > SWIGINTERN VALUE _wrap_OBSmartsPattern_get_smarts(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[2]; int ii; > ^ >openbabel-ruby.cpp: In function 'VALUE _wrap_OBSmartsMatcher_match(int, VALUE*, VALUE)': >openbabel-ruby.cpp:28666:100: warning: variable 'argv' set but not used [-Wunused-but-set-variable] > SWIGINTERN VALUE _wrap_OBSmartsMatcher_match(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[6]; int ii; > ^ >openbabel-ruby.cpp: In function 'VALUE _wrap_OBSSMatch_match(int, VALUE*, VALUE)': >openbabel-ruby.cpp:28739:94: warning: variable 'argv' set but not used [-Wunused-but-set-variable] > SWIGINTERN VALUE _wrap_OBSSMatch_match(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[4]; int ii; argc = nargs + 1; > ^ >openbabel-ruby.cpp: In function 'VALUE _wrap_AliasData_get_alias(int, VALUE*, VALUE)': >openbabel-ruby.cpp:28829:98: warning: variable 'argv' set but not used [-Wunused-but-set-variable] > SWIGINTERN VALUE _wrap_AliasData_get_alias(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[3]; int ii; > ^ >openbabel-ruby.cpp: In function 'VALUE _wrap_OBFingerprint_get_fingerprint(int, VALUE*, VALUE)': >openbabel-ruby.cpp:29093:108: warning: variable 'argv' set but not used [-Wunused-but-set-variable] > SWIGINTERN VALUE _wrap_OBFingerprint_get_fingerprint(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[5]; int ii; > ^ >openbabel-ruby.cpp: In function 'VALUE _wrap_new_OBDescriptor(int, VALUE*, VALUE)': >openbabel-ruby.cpp:29666:95: warning: variable 'argv' set but not used [-Wunused-but-set-variable] > SWIGINTERN VALUE _wrap_new_OBDescriptor(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[2]; int ii; argc = nargs; > ^ >openbabel-ruby.cpp: In function 'VALUE _wrap_OBDescriptor_predict(int, VALUE*, VALUE)': >openbabel-ruby.cpp:29706:99: warning: variable 'argv' set but not used [-Wunused-but-set-variable] > SWIGINTERN VALUE _wrap_OBDescriptor_predict(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[4]; int ii; > ^ >openbabel-ruby.cpp: In function 'VALUE _wrap_OBDescriptor_predict_and_save(int, VALUE*, VALUE)': >openbabel-ruby.cpp:29739:108: warning: variable 'argv' set but not used [-Wunused-but-set-variable] > SWIGINTERN VALUE _wrap_OBDescriptor_predict_and_save(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[4]; int ii; > ^ >openbabel-ruby.cpp: In function 'VALUE _wrap_OBDescriptor_get_string_value(int, VALUE*, VALUE)': >openbabel-ruby.cpp:29783:108: warning: variable 'argv' set but not used [-Wunused-but-set-variable] > SWIGINTERN VALUE _wrap_OBDescriptor_get_string_value(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[5]; int ii; > ^ >openbabel-ruby.cpp: In function 'VALUE _wrap_OBDescriptor_compare(int, VALUE*, VALUE)': >openbabel-ruby.cpp:29832:99: warning: variable 'argv' set but not used [-Wunused-but-set-variable] > SWIGINTERN VALUE _wrap_OBDescriptor_compare(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[6]; int ii; > ^ >openbabel-ruby.cpp: In function 'VALUE _wrap_OBDescriptor_display(int, VALUE*, VALUE)': >openbabel-ruby.cpp:29878:99: warning: variable 'argv' set but not used [-Wunused-but-set-variable] > SWIGINTERN VALUE _wrap_OBDescriptor_display(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[5]; int ii; > ^ >openbabel-ruby.cpp: In function 'VALUE _wrap_OBForceField_setup(int, VALUE*, VALUE)': >openbabel-ruby.cpp:31417:97: warning: variable 'argv' set but not used [-Wunused-but-set-variable] > SWIGINTERN VALUE _wrap_OBForceField_setup(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[4]; int ii; > ^ >openbabel-ruby.cpp: In function 'VALUE _wrap_OBForceField_energy(int, VALUE*, VALUE)': >openbabel-ruby.cpp:31770:98: warning: variable 'argv' set but not used [-Wunused-but-set-variable] > SWIGINTERN VALUE _wrap_OBForceField_energy(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[3]; int ii; > ^ >openbabel-ruby.cpp: In function 'VALUE _wrap_OBForceField_e_bond(int, VALUE*, VALUE)': >openbabel-ruby.cpp:31795:98: warning: variable 'argv' set but not used [-Wunused-but-set-variable] > SWIGINTERN VALUE _wrap_OBForceField_e_bond(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[3]; int ii; > ^ >openbabel-ruby.cpp: In function 'VALUE _wrap_OBForceField_e_angle(int, VALUE*, VALUE)': >openbabel-ruby.cpp:31820:99: warning: variable 'argv' set but not used [-Wunused-but-set-variable] > SWIGINTERN VALUE _wrap_OBForceField_e_angle(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[3]; int ii; > ^ >openbabel-ruby.cpp: In function 'VALUE _wrap_OBForceField_e_str_bnd(int, VALUE*, VALUE)': >openbabel-ruby.cpp:31845:101: warning: variable 'argv' set but not used [-Wunused-but-set-variable] > SWIGINTERN VALUE _wrap_OBForceField_e_str_bnd(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[3]; int ii; > ^ >openbabel-ruby.cpp: In function 'VALUE _wrap_OBForceField_e_torsion(int, VALUE*, VALUE)': >openbabel-ruby.cpp:31870:101: warning: variable 'argv' set but not used [-Wunused-but-set-variable] > SWIGINTERN VALUE _wrap_OBForceField_e_torsion(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[3]; int ii; > ^ >openbabel-ruby.cpp: In function 'VALUE _wrap_OBForceField_e_oop(int, VALUE*, VALUE)': >openbabel-ruby.cpp:31895:97: warning: variable 'argv' set but not used [-Wunused-but-set-variable] > SWIGINTERN VALUE _wrap_OBForceField_e_oop(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[3]; int ii; > ^ >openbabel-ruby.cpp: In function 'VALUE _wrap_OBForceField_e_vdw(int, VALUE*, VALUE)': >openbabel-ruby.cpp:31920:97: warning: variable 'argv' set but not used [-Wunused-but-set-variable] > SWIGINTERN VALUE _wrap_OBForceField_e_vdw(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[3]; int ii; > ^ >openbabel-ruby.cpp: In function 'VALUE _wrap_OBForceField_e_electrostatic(int, VALUE*, VALUE)': >openbabel-ruby.cpp:31945:107: warning: variable 'argv' set but not used [-Wunused-but-set-variable] > SWIGINTERN VALUE _wrap_OBForceField_e_electrostatic(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[3]; int ii; > ^ >openbabel-ruby.cpp: In function 'VALUE _wrap_OBForceField_systematic_rotor_search(int, VALUE*, VALUE)': >openbabel-ruby.cpp:32055:115: warning: variable 'argv' set but not used [-Wunused-but-set-variable] > SWIGINTERN VALUE _wrap_OBForceField_systematic_rotor_search(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[3]; > ^ >openbabel-ruby.cpp: In function 'VALUE _wrap_OBForceField_systematic_rotor_search_initialize(int, VALUE*, VALUE)': >openbabel-ruby.cpp:32082:9: warning: variable 'argv' set but not used [-Wunused-but-set-variable] > VALUE argv[3]; int ii; argc = nargs + 1; argv[0] = self; if (argc > 3) SWIG_fail; for (ii = 1; (ii < argc); ++ii) { > ^ >openbabel-ruby.cpp: In function 'VALUE _wrap_OBForceField_systematic_rotor_search_next_conformer(int, VALUE*, VALUE)': >openbabel-ruby.cpp:32109:9: warning: variable 'argv' set but not used [-Wunused-but-set-variable] > VALUE argv[3]; int ii; argc = nargs + 1; argv[0] = self; if (argc > 3) SWIG_fail; for (ii = 1; (ii < argc); ++ii) { > ^ >openbabel-ruby.cpp: In function 'VALUE _wrap_OBForceField_random_rotor_search(int, VALUE*, VALUE)': >openbabel-ruby.cpp:32138:111: warning: variable 'argv' set but not used [-Wunused-but-set-variable] > SWIGINTERN VALUE _wrap_OBForceField_random_rotor_search(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[4]; int ii; > ^ >openbabel-ruby.cpp: In function 'VALUE _wrap_OBForceField_random_rotor_search_initialize(int, VALUE*, VALUE)': >openbabel-ruby.cpp:32168:9: warning: variable 'argv' set but not used [-Wunused-but-set-variable] > VALUE argv[4]; int ii; argc = nargs + 1; argv[0] = self; if (argc > 4) SWIG_fail; for (ii = 1; (ii < argc); ++ii) { > ^ >openbabel-ruby.cpp: In function 'VALUE _wrap_OBForceField_random_rotor_search_next_conformer(int, VALUE*, VALUE)': >openbabel-ruby.cpp:32195:9: warning: variable 'argv' set but not used [-Wunused-but-set-variable] > VALUE argv[3]; int ii; argc = nargs + 1; argv[0] = self; if (argc > 3) SWIG_fail; for (ii = 1; (ii < argc); ++ii) { > ^ >openbabel-ruby.cpp: In function 'VALUE _wrap_OBForceField_steepest_descent(int, VALUE*, VALUE)': >openbabel-ruby.cpp:32335:108: warning: variable 'argv' set but not used [-Wunused-but-set-variable] > SWIGINTERN VALUE _wrap_OBForceField_steepest_descent(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[5]; int ii; > ^ >openbabel-ruby.cpp: In function 'VALUE _wrap_OBForceField_steepest_descent_initialize(int, VALUE*, VALUE)': >openbabel-ruby.cpp:32386:119: warning: variable 'argv' set but not used [-Wunused-but-set-variable] > SWIGINTERN VALUE _wrap_OBForceField_steepest_descent_initialize(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[5]; > ^ >openbabel-ruby.cpp: In function 'VALUE _wrap_OBForceField_conjugate_gradients(int, VALUE*, VALUE)': >openbabel-ruby.cpp:32443:111: warning: variable 'argv' set but not used [-Wunused-but-set-variable] > SWIGINTERN VALUE _wrap_OBForceField_conjugate_gradients(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[5]; int ii; > ^ >openbabel-ruby.cpp: In function 'VALUE _wrap_OBForceField_conjugate_gradients_initialize(int, VALUE*, VALUE)': >openbabel-ruby.cpp:32495:9: warning: variable 'argv' set but not used [-Wunused-but-set-variable] > VALUE argv[5]; int ii; argc = nargs + 1; argv[0] = self; if (argc > 5) SWIG_fail; for (ii = 1; (ii < argc); ++ii) { > ^ >openbabel-ruby.cpp: In function 'VALUE _wrap_OBForceField_molecular_dynamics_take_nsteps(int, VALUE*, VALUE)': >openbabel-ruby.cpp:32573:9: warning: variable 'argv' set but not used [-Wunused-but-set-variable] > VALUE argv[6]; int ii; argc = nargs + 1; argv[0] = self; if (argc > 6) SWIG_fail; for (ii = 1; (ii < argc); ++ii) { > ^ >openbabel-ruby.cpp: In function 'VALUE _wrap_OBForceField_ignore_calculation(int, VALUE*, VALUE)': >openbabel-ruby.cpp:32670:110: warning: variable 'argv' set but not used [-Wunused-but-set-variable] > SWIGINTERN VALUE _wrap_OBForceField_ignore_calculation(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[4]; int ii; > ^ >openbabel-ruby.cpp: In function 'VALUE _wrap_OBForceField_vector_angle_derivative(int, VALUE*, VALUE)': >openbabel-ruby.cpp:32859:115: warning: variable 'argv' set but not used [-Wunused-but-set-variable] > SWIGINTERN VALUE _wrap_OBForceField_vector_angle_derivative(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[6]; > ^ >openbabel-ruby.cpp: In function 'VALUE _wrap_OBForceField_vector_oopderivative(int, VALUE*, VALUE)': >openbabel-ruby.cpp:32927:112: warning: variable 'argv' set but not used [-Wunused-but-set-variable] > SWIGINTERN VALUE _wrap_OBForceField_vector_oopderivative(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[8]; int ii; > ^ >openbabel-ruby.cpp: In function 'VALUE _wrap_OBForceField_vector_torsion_derivative(int, VALUE*, VALUE)': >openbabel-ruby.cpp:32995:117: warning: variable 'argv' set but not used [-Wunused-but-set-variable] > SWIGINTERN VALUE _wrap_OBForceField_vector_torsion_derivative(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[8]; > ^ >openbabel-ruby.cpp: In function 'VALUE _wrap_OBBuilder_get_new_bond_vector(int, VALUE*, VALUE)': >openbabel-ruby.cpp:33249:108: warning: variable 'argv' set but not used [-Wunused-but-set-variable] > SWIGINTERN VALUE _wrap_OBBuilder_get_new_bond_vector(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[2]; int ii; > ^ >openbabel-ruby.cpp: In function 'VALUE _wrap_OBOp_do(int, VALUE*, VALUE)': >openbabel-ruby.cpp:33499:86: warning: variable 'argv' set but not used [-Wunused-but-set-variable] > SWIGINTERN VALUE _wrap_OBOp_do(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[6]; int ii; argc = nargs + 1; > ^ >openbabel-ruby.cpp: In function 'VALUE _wrap_OBBitVec_first_bit(int, VALUE*, VALUE)': >openbabel-ruby.cpp:33675:97: warning: variable 'argv' set but not used [-Wunused-but-set-variable] > SWIGINTERN VALUE _wrap_OBBitVec_first_bit(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[3]; int ii; > ^ >openbabel-ruby.cpp: In function 'VALUE _wrap_OBRotor_set_rotor(int, VALUE*, VALUE)': >openbabel-ruby.cpp:34200:96: warning: variable 'argv' set but not used [-Wunused-but-set-variable] > SWIGINTERN VALUE _wrap_OBRotor_set_rotor(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[5]; int ii; > ^ >openbabel-ruby.cpp: In function 'VALUE _wrap_OBRotor_set(int, VALUE*, VALUE)': >openbabel-ruby.cpp:34273:90: warning: variable 'argv' set but not used [-Wunused-but-set-variable] > SWIGINTERN VALUE _wrap_OBRotor_set(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[7]; int ii; argc = nargs + 1; > ^ >openbabel-ruby.cpp: In function 'VALUE _wrap_OBRotor_get_dihedral_atoms(int, VALUE*, VALUE)': >openbabel-ruby.cpp:34323:105: warning: variable 'argv' set but not used [-Wunused-but-set-variable] > SWIGINTERN VALUE _wrap_OBRotor_get_dihedral_atoms(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[3]; int ii; > ^ >openbabel-ruby.cpp: In function 'VALUE _wrap_OBRotor_get_rot_atoms(int, VALUE*, VALUE)': >openbabel-ruby.cpp:34471:100: warning: variable 'argv' set but not used [-Wunused-but-set-variable] > SWIGINTERN VALUE _wrap_OBRotor_get_rot_atoms(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[2]; int ii; > ^ >openbabel-ruby.cpp: In function 'VALUE _wrap_new_RotorDigit(int, VALUE*, VALUE)': >openbabel-ruby.cpp:34777:93: warning: variable 'argv' set but not used [-Wunused-but-set-variable] > SWIGINTERN VALUE _wrap_new_RotorDigit(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[1]; int ii; argc = nargs; > ^ >openbabel-ruby.cpp: In function 'VALUE _wrap_OBRotamerList_setup(int, VALUE*, VALUE)': >openbabel-ruby.cpp:34953:98: warning: variable 'argv' set but not used [-Wunused-but-set-variable] > SWIGINTERN VALUE _wrap_OBRotamerList_setup(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[5]; int ii; > ^ >openbabel-ruby.cpp: In function 'VALUE _wrap_OBRotamerList_set_base_coordinate_sets(int, VALUE*, VALUE)': >openbabel-ruby.cpp:35155:117: warning: variable 'argv' set but not used [-Wunused-but-set-variable] > SWIGINTERN VALUE _wrap_OBRotamerList_set_base_coordinate_sets(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[4]; > ^ >openbabel-ruby.cpp: In function 'VALUE _wrap_OBMolAtomIter_inc(int, VALUE*, VALUE)': >openbabel-ruby.cpp:35269:96: warning: variable 'argv' set but not used [-Wunused-but-set-variable] > SWIGINTERN VALUE _wrap_OBMolAtomIter_inc(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[3]; int ii; > ^ >openbabel-ruby.cpp: In function 'VALUE _wrap_OBMolAtomIter_set_vector(int, VALUE*, VALUE)': >openbabel-ruby.cpp:35503:103: warning: variable 'argv' set but not used [-Wunused-but-set-variable] > SWIGINTERN VALUE _wrap_OBMolAtomIter_set_vector(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[5]; int ii; > ^ >openbabel-ruby.cpp: In function 'VALUE _wrap_OBMolAtomIter_get_vector(int, VALUE*, VALUE)': >openbabel-ruby.cpp:35812:103: warning: variable 'argv' set but not used [-Wunused-but-set-variable] > SWIGINTERN VALUE _wrap_OBMolAtomIter_get_vector(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[2]; int ii; > ^ >openbabel-ruby.cpp: In function 'VALUE _wrap_OBMolAtomIter_get_residue(int, VALUE*, VALUE)': >openbabel-ruby.cpp:35847:104: warning: variable 'argv' set but not used [-Wunused-but-set-variable] > SWIGINTERN VALUE _wrap_OBMolAtomIter_get_residue(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[3]; int ii; > ^ >openbabel-ruby.cpp: In function 'VALUE _wrap_OBMolAtomIter_explicit_hydrogen_count(int, VALUE*, VALUE)': >openbabel-ruby.cpp:36193:116: warning: variable 'argv' set but not used [-Wunused-but-set-variable] > SWIGINTERN VALUE _wrap_OBMolAtomIter_explicit_hydrogen_count(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[3]; > ^ >openbabel-ruby.cpp: In function 'VALUE _wrap_OBMolAtomIter_is_hydrogen(int, VALUE*, VALUE)': >openbabel-ruby.cpp:36280:104: warning: variable 'argv' set but not used [-Wunused-but-set-variable] > SWIGINTERN VALUE _wrap_OBMolAtomIter_is_hydrogen(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[2]; int ii; > ^ >openbabel-ruby.cpp: In function 'VALUE _wrap_OBMolAtomIter_has_alpha_beta_unsat(int, VALUE*, VALUE)': >openbabel-ruby.cpp:36573:113: warning: variable 'argv' set but not used [-Wunused-but-set-variable] > SWIGINTERN VALUE _wrap_OBMolAtomIter_has_alpha_beta_unsat(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[3]; int ii; > ^ >openbabel-ruby.cpp: In function 'VALUE _wrap_OBMolAtomIter_get_title(int, VALUE*, VALUE)': >openbabel-ruby.cpp:36700:102: warning: variable 'argv' set but not used [-Wunused-but-set-variable] > SWIGINTERN VALUE _wrap_OBMolAtomIter_get_title(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[3]; int ii; > ^ >openbabel-ruby.cpp: In function 'VALUE _wrap_OBMolAtomDFSIter_inc(int, VALUE*, VALUE)': >openbabel-ruby.cpp:37047:99: warning: variable 'argv' set but not used [-Wunused-but-set-variable] > SWIGINTERN VALUE _wrap_OBMolAtomDFSIter_inc(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[3]; int ii; > ^ >openbabel-ruby.cpp: In function 'VALUE _wrap_OBMolAtomDFSIter_set_vector(int, VALUE*, VALUE)': >openbabel-ruby.cpp:37284:106: warning: variable 'argv' set but not used [-Wunused-but-set-variable] > SWIGINTERN VALUE _wrap_OBMolAtomDFSIter_set_vector(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[5]; int ii; > ^ >openbabel-ruby.cpp: In function 'VALUE _wrap_OBMolAtomDFSIter_get_vector(int, VALUE*, VALUE)': >openbabel-ruby.cpp:37596:106: warning: variable 'argv' set but not used [-Wunused-but-set-variable] > SWIGINTERN VALUE _wrap_OBMolAtomDFSIter_get_vector(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[2]; int ii; > ^ >openbabel-ruby.cpp: In function 'VALUE _wrap_OBMolAtomDFSIter_get_residue(int, VALUE*, VALUE)': >openbabel-ruby.cpp:37631:107: warning: variable 'argv' set but not used [-Wunused-but-set-variable] > SWIGINTERN VALUE _wrap_OBMolAtomDFSIter_get_residue(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[3]; int ii; > ^ >openbabel-ruby.cpp: In function 'VALUE _wrap_OBMolAtomDFSIter_explicit_hydrogen_count(int, VALUE*, VALUE)': >openbabel-ruby.cpp:37977:119: warning: variable 'argv' set but not used [-Wunused-but-set-variable] > SWIGINTERN VALUE _wrap_OBMolAtomDFSIter_explicit_hydrogen_count(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[3]; > ^ >openbabel-ruby.cpp: In function 'VALUE _wrap_OBMolAtomDFSIter_is_hydrogen(int, VALUE*, VALUE)': >openbabel-ruby.cpp:38064:107: warning: variable 'argv' set but not used [-Wunused-but-set-variable] > SWIGINTERN VALUE _wrap_OBMolAtomDFSIter_is_hydrogen(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[2]; int ii; > ^ >openbabel-ruby.cpp: In function 'VALUE _wrap_OBMolAtomDFSIter_has_alpha_beta_unsat(int, VALUE*, VALUE)': >openbabel-ruby.cpp:38357:116: warning: variable 'argv' set but not used [-Wunused-but-set-variable] > SWIGINTERN VALUE _wrap_OBMolAtomDFSIter_has_alpha_beta_unsat(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[3]; > ^ >openbabel-ruby.cpp: In function 'VALUE _wrap_OBMolAtomDFSIter_get_title(int, VALUE*, VALUE)': >openbabel-ruby.cpp:38484:105: warning: variable 'argv' set but not used [-Wunused-but-set-variable] > SWIGINTERN VALUE _wrap_OBMolAtomDFSIter_get_title(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[3]; int ii; > ^ >openbabel-ruby.cpp: In function 'VALUE _wrap_OBMolAtomBFSIter_inc(int, VALUE*, VALUE)': >openbabel-ruby.cpp:38831:99: warning: variable 'argv' set but not used [-Wunused-but-set-variable] > SWIGINTERN VALUE _wrap_OBMolAtomBFSIter_inc(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[3]; int ii; > ^ >openbabel-ruby.cpp: In function 'VALUE _wrap_OBMolAtomBFSIter_set_vector(int, VALUE*, VALUE)': >openbabel-ruby.cpp:39068:106: warning: variable 'argv' set but not used [-Wunused-but-set-variable] > SWIGINTERN VALUE _wrap_OBMolAtomBFSIter_set_vector(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[5]; int ii; > ^ >openbabel-ruby.cpp: In function 'VALUE _wrap_OBMolAtomBFSIter_get_vector(int, VALUE*, VALUE)': >openbabel-ruby.cpp:39380:106: warning: variable 'argv' set but not used [-Wunused-but-set-variable] > SWIGINTERN VALUE _wrap_OBMolAtomBFSIter_get_vector(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[2]; int ii; > ^ >openbabel-ruby.cpp: In function 'VALUE _wrap_OBMolAtomBFSIter_get_residue(int, VALUE*, VALUE)': >openbabel-ruby.cpp:39415:107: warning: variable 'argv' set but not used [-Wunused-but-set-variable] > SWIGINTERN VALUE _wrap_OBMolAtomBFSIter_get_residue(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[3]; int ii; > ^ >openbabel-ruby.cpp: In function 'VALUE _wrap_OBMolAtomBFSIter_explicit_hydrogen_count(int, VALUE*, VALUE)': >openbabel-ruby.cpp:39761:119: warning: variable 'argv' set but not used [-Wunused-but-set-variable] > SWIGINTERN VALUE _wrap_OBMolAtomBFSIter_explicit_hydrogen_count(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[3]; > ^ >openbabel-ruby.cpp: In function 'VALUE _wrap_OBMolAtomBFSIter_is_hydrogen(int, VALUE*, VALUE)': >openbabel-ruby.cpp:39848:107: warning: variable 'argv' set but not used [-Wunused-but-set-variable] > SWIGINTERN VALUE _wrap_OBMolAtomBFSIter_is_hydrogen(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[2]; int ii; > ^ >openbabel-ruby.cpp: In function 'VALUE _wrap_OBMolAtomBFSIter_has_alpha_beta_unsat(int, VALUE*, VALUE)': >openbabel-ruby.cpp:40141:116: warning: variable 'argv' set but not used [-Wunused-but-set-variable] > SWIGINTERN VALUE _wrap_OBMolAtomBFSIter_has_alpha_beta_unsat(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[3]; > ^ >openbabel-ruby.cpp: In function 'VALUE _wrap_OBMolAtomBFSIter_get_title(int, VALUE*, VALUE)': >openbabel-ruby.cpp:40268:105: warning: variable 'argv' set but not used [-Wunused-but-set-variable] > SWIGINTERN VALUE _wrap_OBMolAtomBFSIter_get_title(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[3]; int ii; > ^ >openbabel-ruby.cpp: In function 'VALUE _wrap_OBMolBondBFSIter_inc(int, VALUE*, VALUE)': >openbabel-ruby.cpp:40615:99: warning: variable 'argv' set but not used [-Wunused-but-set-variable] > SWIGINTERN VALUE _wrap_OBMolBondBFSIter_inc(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[3]; int ii; > ^ >openbabel-ruby.cpp: In function 'VALUE _wrap_OBMolBondBFSIter_set_length(int, VALUE*, VALUE)': >openbabel-ruby.cpp:40756:106: warning: variable 'argv' set but not used [-Wunused-but-set-variable] > SWIGINTERN VALUE _wrap_OBMolBondBFSIter_set_length(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[4]; int ii; > ^ >openbabel-ruby.cpp: In function 'VALUE _wrap_OBMolBondBFSIter_set_in_ring(int, VALUE*, VALUE)': >openbabel-ruby.cpp:40854:107: warning: variable 'argv' set but not used [-Wunused-but-set-variable] > SWIGINTERN VALUE _wrap_OBMolBondBFSIter_set_in_ring(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[3]; int ii; > ^ >openbabel-ruby.cpp: In function 'VALUE _wrap_OBMolBondBFSIter_get_begin_atom(int, VALUE*, VALUE)': >openbabel-ruby.cpp:40976:110: warning: variable 'argv' set but not used [-Wunused-but-set-variable] > SWIGINTERN VALUE _wrap_OBMolBondBFSIter_get_begin_atom(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[2]; int ii; > ^ >openbabel-ruby.cpp: In function 'VALUE _wrap_OBMolBondBFSIter_get_end_atom(int, VALUE*, VALUE)': >openbabel-ruby.cpp:41000:108: warning: variable 'argv' set but not used [-Wunused-but-set-variable] > SWIGINTERN VALUE _wrap_OBMolBondBFSIter_get_end_atom(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[2]; int ii; > ^ >openbabel-ruby.cpp: In function 'VALUE _wrap_OBMolBondBFSIter_get_title(int, VALUE*, VALUE)': >openbabel-ruby.cpp:41302:105: warning: variable 'argv' set but not used [-Wunused-but-set-variable] > SWIGINTERN VALUE _wrap_OBMolBondBFSIter_get_title(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[3]; int ii; > ^ >openbabel-ruby.cpp: In function 'VALUE _wrap_OBMolBondIter_inc(int, VALUE*, VALUE)': >openbabel-ruby.cpp:41634:96: warning: variable 'argv' set but not used [-Wunused-but-set-variable] > SWIGINTERN VALUE _wrap_OBMolBondIter_inc(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[3]; int ii; > ^ >openbabel-ruby.cpp: In function 'VALUE _wrap_OBMolBondIter_set_length(int, VALUE*, VALUE)': >openbabel-ruby.cpp:41764:103: warning: variable 'argv' set but not used [-Wunused-but-set-variable] > SWIGINTERN VALUE _wrap_OBMolBondIter_set_length(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[4]; int ii; > ^ >openbabel-ruby.cpp: In function 'VALUE _wrap_OBMolBondIter_set_in_ring(int, VALUE*, VALUE)': >openbabel-ruby.cpp:41861:104: warning: variable 'argv' set but not used [-Wunused-but-set-variable] > SWIGINTERN VALUE _wrap_OBMolBondIter_set_in_ring(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[3]; int ii; > ^ >openbabel-ruby.cpp: In function 'VALUE _wrap_OBMolBondIter_get_begin_atom(int, VALUE*, VALUE)': >openbabel-ruby.cpp:41983:107: warning: variable 'argv' set but not used [-Wunused-but-set-variable] > SWIGINTERN VALUE _wrap_OBMolBondIter_get_begin_atom(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[2]; int ii; > ^ >openbabel-ruby.cpp: In function 'VALUE _wrap_OBMolBondIter_get_end_atom(int, VALUE*, VALUE)': >openbabel-ruby.cpp:42007:105: warning: variable 'argv' set but not used [-Wunused-but-set-variable] > SWIGINTERN VALUE _wrap_OBMolBondIter_get_end_atom(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[2]; int ii; > ^ >openbabel-ruby.cpp: In function 'VALUE _wrap_OBMolBondIter_get_title(int, VALUE*, VALUE)': >openbabel-ruby.cpp:42309:102: warning: variable 'argv' set but not used [-Wunused-but-set-variable] > SWIGINTERN VALUE _wrap_OBMolBondIter_get_title(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[3]; int ii; > ^ >openbabel-ruby.cpp: In function 'VALUE _wrap_OBAtomAtomIter_inc(int, VALUE*, VALUE)': >openbabel-ruby.cpp:42643:97: warning: variable 'argv' set but not used [-Wunused-but-set-variable] > SWIGINTERN VALUE _wrap_OBAtomAtomIter_inc(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[3]; int ii; > ^ >openbabel-ruby.cpp: In function 'VALUE _wrap_OBAtomAtomIter_set_vector(int, VALUE*, VALUE)': >openbabel-ruby.cpp:42869:104: warning: variable 'argv' set but not used [-Wunused-but-set-variable] > SWIGINTERN VALUE _wrap_OBAtomAtomIter_set_vector(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[5]; int ii; > ^ >/builddir/build/BUILD/openbabel-2.3.2/scripts/python/openbabel-python.cpp: In function 'void SWIG_InitializeModule(void*)': >/builddir/build/BUILD/openbabel-2.3.2/scripts/python/openbabel-python.cpp:57060:21: warning: statement has no effect [-Wunused-value] > (void *)clientdata; > ^ >openbabel-ruby.cpp: In function 'VALUE _wrap_OBAtomAtomIter_get_vector(int, VALUE*, VALUE)': >openbabel-ruby.cpp:43179:104: warning: variable 'argv' set but not used [-Wunused-but-set-variable] > SWIGINTERN VALUE _wrap_OBAtomAtomIter_get_vector(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[2]; int ii; > ^ >openbabel-ruby.cpp: In function 'VALUE _wrap_OBAtomAtomIter_get_residue(int, VALUE*, VALUE)': >openbabel-ruby.cpp:43214:105: warning: variable 'argv' set but not used [-Wunused-but-set-variable] > SWIGINTERN VALUE _wrap_OBAtomAtomIter_get_residue(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[3]; int ii; > ^ >openbabel-ruby.cpp: In function 'VALUE _wrap_OBAtomAtomIter_explicit_hydrogen_count(int, VALUE*, VALUE)': >openbabel-ruby.cpp:43560:117: warning: variable 'argv' set but not used [-Wunused-but-set-variable] > SWIGINTERN VALUE _wrap_OBAtomAtomIter_explicit_hydrogen_count(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[3]; > ^ >openbabel-ruby.cpp: In function 'VALUE _wrap_OBAtomAtomIter_is_hydrogen(int, VALUE*, VALUE)': >openbabel-ruby.cpp:43647:105: warning: variable 'argv' set but not used [-Wunused-but-set-variable] > SWIGINTERN VALUE _wrap_OBAtomAtomIter_is_hydrogen(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[2]; int ii; > ^ >openbabel-ruby.cpp: In function 'VALUE _wrap_OBAtomAtomIter_has_alpha_beta_unsat(int, VALUE*, VALUE)': >openbabel-ruby.cpp:43940:114: warning: variable 'argv' set but not used [-Wunused-but-set-variable] > SWIGINTERN VALUE _wrap_OBAtomAtomIter_has_alpha_beta_unsat(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[3]; > ^ >openbabel-ruby.cpp: In function 'VALUE _wrap_OBAtomAtomIter_get_title(int, VALUE*, VALUE)': >openbabel-ruby.cpp:44067:103: warning: variable 'argv' set but not used [-Wunused-but-set-variable] > SWIGINTERN VALUE _wrap_OBAtomAtomIter_get_title(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[3]; int ii; > ^ >openbabel-ruby.cpp: In function 'VALUE _wrap_OBAtomBondIter_inc(int, VALUE*, VALUE)': >openbabel-ruby.cpp:44401:97: warning: variable 'argv' set but not used [-Wunused-but-set-variable] > SWIGINTERN VALUE _wrap_OBAtomBondIter_inc(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[3]; int ii; > ^ >openbabel-ruby.cpp: In function 'VALUE _wrap_OBAtomBondIter_set_length(int, VALUE*, VALUE)': >openbabel-ruby.cpp:44532:104: warning: variable 'argv' set but not used [-Wunused-but-set-variable] > SWIGINTERN VALUE _wrap_OBAtomBondIter_set_length(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[4]; int ii; > ^ >openbabel-ruby.cpp: In function 'VALUE _wrap_OBAtomBondIter_set_in_ring(int, VALUE*, VALUE)': >openbabel-ruby.cpp:44629:105: warning: variable 'argv' set but not used [-Wunused-but-set-variable] > SWIGINTERN VALUE _wrap_OBAtomBondIter_set_in_ring(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[3]; int ii; > ^ >openbabel-ruby.cpp: In function 'VALUE _wrap_OBAtomBondIter_get_begin_atom(int, VALUE*, VALUE)': >openbabel-ruby.cpp:44751:108: warning: variable 'argv' set but not used [-Wunused-but-set-variable] > SWIGINTERN VALUE _wrap_OBAtomBondIter_get_begin_atom(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[2]; int ii; > ^ >openbabel-ruby.cpp: In function 'VALUE _wrap_OBAtomBondIter_get_end_atom(int, VALUE*, VALUE)': >openbabel-ruby.cpp:44775:106: warning: variable 'argv' set but not used [-Wunused-but-set-variable] > SWIGINTERN VALUE _wrap_OBAtomBondIter_get_end_atom(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[2]; int ii; > ^ >openbabel-ruby.cpp: In function 'VALUE _wrap_OBAtomBondIter_get_title(int, VALUE*, VALUE)': >openbabel-ruby.cpp:45077:103: warning: variable 'argv' set but not used [-Wunused-but-set-variable] > SWIGINTERN VALUE _wrap_OBAtomBondIter_get_title(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[3]; int ii; > ^ >openbabel-ruby.cpp: In function 'VALUE _wrap_OBResidueIter_inc(int, VALUE*, VALUE)': >openbabel-ruby.cpp:45409:96: warning: variable 'argv' set but not used [-Wunused-but-set-variable] > SWIGINTERN VALUE _wrap_OBResidueIter_inc(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[3]; int ii; > ^ >openbabel-ruby.cpp: In function 'VALUE _wrap_OBResidueIter_get_bonds(int, VALUE*, VALUE)': >openbabel-ruby.cpp:45669:102: warning: variable 'argv' set but not used [-Wunused-but-set-variable] > SWIGINTERN VALUE _wrap_OBResidueIter_get_bonds(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[3]; int ii; > ^ >openbabel-ruby.cpp: In function 'VALUE _wrap_OBResidueIter_get_title(int, VALUE*, VALUE)': >openbabel-ruby.cpp:45865:102: warning: variable 'argv' set but not used [-Wunused-but-set-variable] > SWIGINTERN VALUE _wrap_OBResidueIter_get_title(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[3]; int ii; > ^ >openbabel-ruby.cpp: In function 'VALUE _wrap_OBResidueAtomIter_inc(int, VALUE*, VALUE)': >openbabel-ruby.cpp:46202:100: warning: variable 'argv' set but not used [-Wunused-but-set-variable] > SWIGINTERN VALUE _wrap_OBResidueAtomIter_inc(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[3]; int ii; > ^ >openbabel-ruby.cpp: In function 'VALUE _wrap_OBResidueAtomIter_set_vector(int, VALUE*, VALUE)': >openbabel-ruby.cpp:46435:107: warning: variable 'argv' set but not used [-Wunused-but-set-variable] > SWIGINTERN VALUE _wrap_OBResidueAtomIter_set_vector(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[5]; int ii; > ^ >openbabel-ruby.cpp: In function 'VALUE _wrap_OBResidueAtomIter_get_vector(int, VALUE*, VALUE)': >openbabel-ruby.cpp:46747:107: warning: variable 'argv' set but not used [-Wunused-but-set-variable] > SWIGINTERN VALUE _wrap_OBResidueAtomIter_get_vector(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[2]; int ii; > ^ >openbabel-ruby.cpp: In function 'VALUE _wrap_OBResidueAtomIter_get_residue(int, VALUE*, VALUE)': >openbabel-ruby.cpp:46782:108: warning: variable 'argv' set but not used [-Wunused-but-set-variable] > SWIGINTERN VALUE _wrap_OBResidueAtomIter_get_residue(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[3]; int ii; > ^ >openbabel-ruby.cpp: In function 'VALUE _wrap_OBResidueAtomIter_explicit_hydrogen_count(int, VALUE*, VALUE)': >openbabel-ruby.cpp:47129:120: warning: variable 'argv' set but not used [-Wunused-but-set-variable] > SWIGINTERN VALUE _wrap_OBResidueAtomIter_explicit_hydrogen_count(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[3]; > ^ >openbabel-ruby.cpp: In function 'VALUE _wrap_OBResidueAtomIter_is_hydrogen(int, VALUE*, VALUE)': >openbabel-ruby.cpp:47216:108: warning: variable 'argv' set but not used [-Wunused-but-set-variable] > SWIGINTERN VALUE _wrap_OBResidueAtomIter_is_hydrogen(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[2]; int ii; > ^ >openbabel-ruby.cpp: In function 'VALUE _wrap_OBResidueAtomIter_has_alpha_beta_unsat(int, VALUE*, VALUE)': >openbabel-ruby.cpp:47509:117: warning: variable 'argv' set but not used [-Wunused-but-set-variable] > SWIGINTERN VALUE _wrap_OBResidueAtomIter_has_alpha_beta_unsat(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[3]; > ^ >openbabel-ruby.cpp: In function 'VALUE _wrap_OBResidueAtomIter_get_title(int, VALUE*, VALUE)': >openbabel-ruby.cpp:47636:106: warning: variable 'argv' set but not used [-Wunused-but-set-variable] > SWIGINTERN VALUE _wrap_OBResidueAtomIter_get_title(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[3]; int ii; > ^ >openbabel-ruby.cpp: In function 'VALUE _wrap_OBMolRingIter_inc(int, VALUE*, VALUE)': >openbabel-ruby.cpp:48196:96: warning: variable 'argv' set but not used [-Wunused-but-set-variable] > SWIGINTERN VALUE _wrap_OBMolRingIter_inc(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[3]; int ii; > ^ >openbabel-perl.cpp: In function 'void SWIG_InitializeModule(void*)': >openbabel-perl.cpp:43635:21: warning: statement has no effect [-Wunused-value] > (void *)clientdata; > ^ >In file included from openbabel-perl.cpp:756:0: >openbabel-perl.cpp: In function 'void boot_Chemistry__OpenBabel(PerlInterpreter*, CV*)': >/usr/lib/perl5/CORE/XSUB.h:164:20: warning: unused variable 'items' [-Wunused-variable] > #define dITEMS I32 items = (I32)(SP - MARK) > ^ >/usr/lib/perl5/CORE/XSUB.h:172:16: note: in expansion of macro 'dITEMS' > dSP; dAXMARK; dITEMS > ^ >openbabel-perl.cpp:43820:3: note: in expansion of macro 'dXSARGS' > dXSARGS; > ^ >openbabel-ruby.cpp: In function 'VALUE _wrap_new_OBRing(int, VALUE*, VALUE)': >openbabel-ruby.cpp:1376:109: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] > #define SWIG_ConvertPtr(obj, pptr, type, flags) SWIG_Ruby_ConvertPtrAndOwn(obj, pptr, type, flags, 0) > ^ >openbabel-ruby.cpp:27817:89: note: 'argv[1]' was declared here > SWIGINTERN VALUE _wrap_new_OBRing(int nargs, VALUE *args, VALUE self) { int argc; VALUE argv[2]; int ii; argc = nargs; > ^ >openbabel-ruby.cpp: At global scope: >openbabel-ruby.cpp:48572:14: warning: 'void* _p_p_OpenBabel__OBRotamerListTo_p_p_OpenBabel__OBGenericData(void*, int*)' defined but not used [-Wunused-function] > static void *_p_p_OpenBabel__OBRotamerListTo_p_p_OpenBabel__OBGenericData(void *x, int *SWIGUNUSEDPARM(newmemory)) { > ^ >openbabel-ruby.cpp:48575:14: warning: 'void* _p_p_OpenBabel__OBVibrationDataTo_p_p_OpenBabel__OBGenericData(void*, int*)' defined but not used [-Wunused-function] > static void *_p_p_OpenBabel__OBVibrationDataTo_p_p_OpenBabel__OBGenericData(void *x, int *SWIGUNUSEDPARM(newmemory)) { > ^ >openbabel-ruby.cpp:48578:14: warning: 'void* _p_p_OpenBabel__OBTorsionDataTo_p_p_OpenBabel__OBGenericData(void*, int*)' defined but not used [-Wunused-function] > static void *_p_p_OpenBabel__OBTorsionDataTo_p_p_OpenBabel__OBGenericData(void *x, int *SWIGUNUSEDPARM(newmemory)) { > ^ >openbabel-ruby.cpp:48581:14: warning: 'void* _p_p_OpenBabel__OBElectronicTransitionDataTo_p_p_OpenBabel__OBGenericData(void*, int*)' defined but not used [-Wunused-function] > static void *_p_p_OpenBabel__OBElectronicTransitionDataTo_p_p_OpenBabel__OBGenericData(void *x, int *SWIGUNUSEDPARM(newmemory)) { > ^ >openbabel-ruby.cpp:48584:14: warning: 'void* _p_p_OpenBabel__OBRotationDataTo_p_p_OpenBabel__OBGenericData(void*, int*)' defined but not used [-Wunused-function] > static void *_p_p_OpenBabel__OBRotationDataTo_p_p_OpenBabel__OBGenericData(void *x, int *SWIGUNUSEDPARM(newmemory)) { > ^ >openbabel-ruby.cpp:48587:14: warning: 'void* _p_p_OpenBabel__OBPairDataTo_p_p_OpenBabel__OBGenericData(void*, int*)' defined but not used [-Wunused-function] > static void *_p_p_OpenBabel__OBPairDataTo_p_p_OpenBabel__OBGenericData(void *x, int *SWIGUNUSEDPARM(newmemory)) { > ^ >openbabel-ruby.cpp:48590:14: warning: 'void* _p_p_OpenBabel__AliasDataTo_p_p_OpenBabel__OBGenericData(void*, int*)' defined but not used [-Wunused-function] > static void *_p_p_OpenBabel__AliasDataTo_p_p_OpenBabel__OBGenericData(void *x, int *SWIGUNUSEDPARM(newmemory)) { > ^ >openbabel-ruby.cpp:48593:14: warning: 'void* _p_p_OpenBabel__OBAngleDataTo_p_p_OpenBabel__OBGenericData(void*, int*)' defined but not used [-Wunused-function] > static void *_p_p_OpenBabel__OBAngleDataTo_p_p_OpenBabel__OBGenericData(void *x, int *SWIGUNUSEDPARM(newmemory)) { > ^ >openbabel-ruby.cpp:48596:14: warning: 'void* _p_p_OpenBabel__OBAtomClassDataTo_p_p_OpenBabel__OBGenericData(void*, int*)' defined but not used [-Wunused-function] > static void *_p_p_OpenBabel__OBAtomClassDataTo_p_p_OpenBabel__OBGenericData(void *x, int *SWIGUNUSEDPARM(newmemory)) { > ^ >openbabel-ruby.cpp:48599:14: warning: 'void* _p_p_OpenBabel__OBChiralDataTo_p_p_OpenBabel__OBGenericData(void*, int*)' defined but not used [-Wunused-function] > static void *_p_p_OpenBabel__OBChiralDataTo_p_p_OpenBabel__OBGenericData(void *x, int *SWIGUNUSEDPARM(newmemory)) { > ^ >openbabel-ruby.cpp:48602:14: warning: 'void* _p_p_OpenBabel__OBOrbitalDataTo_p_p_OpenBabel__OBGenericData(void*, int*)' defined but not used [-Wunused-function] > static void *_p_p_OpenBabel__OBOrbitalDataTo_p_p_OpenBabel__OBGenericData(void *x, int *SWIGUNUSEDPARM(newmemory)) { > ^ >openbabel-ruby.cpp:48605:14: warning: 'void* _p_p_OpenBabel__OBRingDataTo_p_p_OpenBabel__OBGenericData(void*, int*)' defined but not used [-Wunused-function] > static void *_p_p_OpenBabel__OBRingDataTo_p_p_OpenBabel__OBGenericData(void *x, int *SWIGUNUSEDPARM(newmemory)) { > ^ >openbabel-ruby.cpp:48608:14: warning: 'void* _p_p_OpenBabel__OBSerialNumsTo_p_p_OpenBabel__OBGenericData(void*, int*)' defined but not used [-Wunused-function] > static void *_p_p_OpenBabel__OBSerialNumsTo_p_p_OpenBabel__OBGenericData(void *x, int *SWIGUNUSEDPARM(newmemory)) { > ^ >openbabel-ruby.cpp:48611:14: warning: 'void* _p_p_OpenBabel__OBExternalBondDataTo_p_p_OpenBabel__OBGenericData(void*, int*)' defined but not used [-Wunused-function] > static void *_p_p_OpenBabel__OBExternalBondDataTo_p_p_OpenBabel__OBGenericData(void *x, int *SWIGUNUSEDPARM(newmemory)) { > ^ >openbabel-ruby.cpp:48614:14: warning: 'void* _p_p_OpenBabel__OBSetDataTo_p_p_OpenBabel__OBGenericData(void*, int*)' defined but not used [-Wunused-function] > static void *_p_p_OpenBabel__OBSetDataTo_p_p_OpenBabel__OBGenericData(void *x, int *SWIGUNUSEDPARM(newmemory)) { > ^ >openbabel-ruby.cpp:48617:14: warning: 'void* _p_p_OpenBabel__OBSymmetryDataTo_p_p_OpenBabel__OBGenericData(void*, int*)' defined but not used [-Wunused-function] > static void *_p_p_OpenBabel__OBSymmetryDataTo_p_p_OpenBabel__OBGenericData(void *x, int *SWIGUNUSEDPARM(newmemory)) { > ^ >openbabel-ruby.cpp:48620:14: warning: 'void* _p_p_OpenBabel__OBMatrixDataTo_p_p_OpenBabel__OBGenericData(void*, int*)' defined but not used [-Wunused-function] > static void *_p_p_OpenBabel__OBMatrixDataTo_p_p_OpenBabel__OBGenericData(void *x, int *SWIGUNUSEDPARM(newmemory)) { > ^ >openbabel-ruby.cpp:48623:14: warning: 'void* _p_p_OpenBabel__OBCommentDataTo_p_p_OpenBabel__OBGenericData(void*, int*)' defined but not used [-Wunused-function] > static void *_p_p_OpenBabel__OBCommentDataTo_p_p_OpenBabel__OBGenericData(void *x, int *SWIGUNUSEDPARM(newmemory)) { > ^ >openbabel-ruby.cpp:48626:14: warning: 'void* _p_p_OpenBabel__OBVectorDataTo_p_p_OpenBabel__OBGenericData(void*, int*)' defined but not used [-Wunused-function] > static void *_p_p_OpenBabel__OBVectorDataTo_p_p_OpenBabel__OBGenericData(void *x, int *SWIGUNUSEDPARM(newmemory)) { > ^ >openbabel-ruby.cpp:48629:14: warning: 'void* _p_p_OpenBabel__OBVirtualBondTo_p_p_OpenBabel__OBGenericData(void*, int*)' defined but not used [-Wunused-function] > static void *_p_p_OpenBabel__OBVirtualBondTo_p_p_OpenBabel__OBGenericData(void *x, int *SWIGUNUSEDPARM(newmemory)) { > ^ >openbabel-ruby.cpp:48632:14: warning: 'void* _p_p_OpenBabel__OBConformerDataTo_p_p_OpenBabel__OBGenericData(void*, int*)' defined but not used [-Wunused-function] > static void *_p_p_OpenBabel__OBConformerDataTo_p_p_OpenBabel__OBGenericData(void *x, int *SWIGUNUSEDPARM(newmemory)) { > ^ >openbabel-ruby.cpp:48635:14: warning: 'void* _p_p_OpenBabel__OBDOSDataTo_p_p_OpenBabel__OBGenericData(void*, int*)' defined but not used [-Wunused-function] > static void *_p_p_OpenBabel__OBDOSDataTo_p_p_OpenBabel__OBGenericData(void *x, int *SWIGUNUSEDPARM(newmemory)) { > ^ >openbabel-ruby.cpp:48638:14: warning: 'void* _p_p_OpenBabel__OBGridDataTo_p_p_OpenBabel__OBGenericData(void*, int*)' defined but not used [-Wunused-function] > static void *_p_p_OpenBabel__OBGridDataTo_p_p_OpenBabel__OBGenericData(void *x, int *SWIGUNUSEDPARM(newmemory)) { > ^ >openbabel-ruby.cpp:48641:14: warning: 'void* _p_p_OpenBabel__OBUnitCellTo_p_p_OpenBabel__OBGenericData(void*, int*)' defined but not used [-Wunused-function] > static void *_p_p_OpenBabel__OBUnitCellTo_p_p_OpenBabel__OBGenericData(void *x, int *SWIGUNUSEDPARM(newmemory)) { > ^ >rm -f openbabel.so >g++ -shared -o openbabel.so openbabel-ruby.o -L. -L/usr/lib -L/builddir/build/BUILD/openbabel-2.3.2/lib -L. -Wl,-z,relro -fstack-protector -rdynamic -Wl,-export-dynamic -dynamic -lruby -lopenbabel -lpthread -ldl -lcrypt -lm -lc >make[3]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2/scripts/ruby' >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 99%] Built target bindings_ruby >Linking CXX shared module ../lib/_openbabel.so >cd /builddir/build/BUILD/openbabel-2.3.2/scripts && /usr/bin/cmake -E cmake_link_script CMakeFiles/bindings_python.dir/link.txt --verbose=1 >/usr/bin/c++ -fPIC -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -pthread -O2 -g -DNDEBUG -O2 -g -Wl,--enable-new-dtags -Wl,--enable-new-dtags -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -shared -Wl,-soname,_openbabel.so -o ../lib/_openbabel.so CMakeFiles/bindings_python.dir/python/openbabel-python.cpp.o -lpython2.7 ../lib/libopenbabel.so.4.0.2 -lm -ldl -lz >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles 6 >[100%] Built target bindings_python >rm -f blib/arch/auto/Chemistry/OpenBabel/OpenBabel.so >g++ -shared -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -Wl,-z,relro -L/usr/local/lib openbabel-perl.o -L/builddir/build/BUILD/openbabel-2.3.2/lib -lopenbabel -o blib/arch/auto/Chemistry/OpenBabel/OpenBabel.so \ > -lperl \ > >chmod 755 blib/arch/auto/Chemistry/OpenBabel/OpenBabel.so >/usr/bin/perl -MExtUtils::Command::MM -e 'cp_nonempty' -- OpenBabel.bs blib/arch/auto/Chemistry/OpenBabel/OpenBabel.bs 644 >make[3]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2/scripts/perl' >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[100%] Built target bindings_perl >make[1]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles 0 >+ exit 0 >Executing(%install): /bin/sh -e /var/tmp/rpm-tmp.9Y8Xq7 >+ umask 022 >+ cd /builddir/build/BUILD >+ '[' /builddir/build/BUILDROOT/openbabel-2.3.2-4.fc21.arm '!=' / ']' >+ rm -rf /builddir/build/BUILDROOT/openbabel-2.3.2-4.fc21.arm >++ dirname /builddir/build/BUILDROOT/openbabel-2.3.2-4.fc21.arm >+ mkdir -p /builddir/build/BUILDROOT >+ mkdir /builddir/build/BUILDROOT/openbabel-2.3.2-4.fc21.arm >+ cd openbabel-2.3.2 >+ make VERBOSE=1 DESTDIR=/builddir/build/BUILDROOT/openbabel-2.3.2-4.fc21.arm ruby_headers= install >/usr/bin/cmake -H/builddir/build/BUILD/openbabel-2.3.2 -B/builddir/build/BUILD/openbabel-2.3.2 --check-build-system CMakeFiles/Makefile.cmake 0 >/usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles/progress.marks >make -f CMakeFiles/Makefile2 all >make[1]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f src/CMakeFiles/openbabel.dir/build.make src/CMakeFiles/openbabel.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src /builddir/build/BUILD/openbabel-2.3.2/src/CMakeFiles/openbabel.dir/DependInfo.cmake --color= >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f src/CMakeFiles/openbabel.dir/build.make src/CMakeFiles/openbabel.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >make[2]: Nothing to be done for `src/CMakeFiles/openbabel.dir/build'. >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 >[ 22%] Built target openbabel >make -f src/CMakeFiles/plugin_charges.dir/build.make src/CMakeFiles/plugin_charges.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src /builddir/build/BUILD/openbabel-2.3.2/src/CMakeFiles/plugin_charges.dir/DependInfo.cmake --color= >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f src/CMakeFiles/plugin_charges.dir/build.make src/CMakeFiles/plugin_charges.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >make[2]: Nothing to be done for `src/CMakeFiles/plugin_charges.dir/build'. >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles 59 60 >[ 24%] Built target plugin_charges >make -f src/CMakeFiles/plugin_descriptors.dir/build.make src/CMakeFiles/plugin_descriptors.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src /builddir/build/BUILD/openbabel-2.3.2/src/CMakeFiles/plugin_descriptors.dir/DependInfo.cmake --color= >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f src/CMakeFiles/plugin_descriptors.dir/build.make src/CMakeFiles/plugin_descriptors.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >make[2]: Nothing to be done for `src/CMakeFiles/plugin_descriptors.dir/build'. >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles 61 62 >[ 26%] Built target plugin_descriptors >make -f src/CMakeFiles/plugin_fingerprints.dir/build.make src/CMakeFiles/plugin_fingerprints.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src /builddir/build/BUILD/openbabel-2.3.2/src/CMakeFiles/plugin_fingerprints.dir/DependInfo.cmake --color= >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f src/CMakeFiles/plugin_fingerprints.dir/build.make src/CMakeFiles/plugin_fingerprints.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >make[2]: Nothing to be done for `src/CMakeFiles/plugin_fingerprints.dir/build'. >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles 63 >[ 27%] Built target plugin_fingerprints >make -f src/CMakeFiles/plugin_forcefields.dir/build.make src/CMakeFiles/plugin_forcefields.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src /builddir/build/BUILD/openbabel-2.3.2/src/CMakeFiles/plugin_forcefields.dir/DependInfo.cmake --color= >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f src/CMakeFiles/plugin_forcefields.dir/build.make src/CMakeFiles/plugin_forcefields.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >make[2]: Nothing to be done for `src/CMakeFiles/plugin_forcefields.dir/build'. >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles 64 >[ 28%] Built target plugin_forcefields >make -f src/CMakeFiles/plugin_ops.dir/build.make src/CMakeFiles/plugin_ops.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src /builddir/build/BUILD/openbabel-2.3.2/src/CMakeFiles/plugin_ops.dir/DependInfo.cmake --color= >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f src/CMakeFiles/plugin_ops.dir/build.make src/CMakeFiles/plugin_ops.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >make[2]: Nothing to be done for `src/CMakeFiles/plugin_ops.dir/build'. >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles 65 66 67 68 69 70 71 >[ 35%] Built target plugin_ops >make -f src/formats/CMakeFiles/APIInterface.dir/build.make src/formats/CMakeFiles/APIInterface.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/APIInterface.dir/DependInfo.cmake --color= >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f src/formats/CMakeFiles/APIInterface.dir/build.make src/formats/CMakeFiles/APIInterface.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >make[2]: Nothing to be done for `src/formats/CMakeFiles/APIInterface.dir/build'. >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 35%] Built target APIInterface >make -f src/formats/CMakeFiles/CSRformat.dir/build.make src/formats/CMakeFiles/CSRformat.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/CSRformat.dir/DependInfo.cmake --color= >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f src/formats/CMakeFiles/CSRformat.dir/build.make src/formats/CMakeFiles/CSRformat.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >make[2]: Nothing to be done for `src/formats/CMakeFiles/CSRformat.dir/build'. >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 35%] Built target CSRformat >make -f src/formats/CMakeFiles/MCDLformat.dir/build.make src/formats/CMakeFiles/MCDLformat.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/MCDLformat.dir/DependInfo.cmake --color= >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f src/formats/CMakeFiles/MCDLformat.dir/build.make src/formats/CMakeFiles/MCDLformat.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >make[2]: Nothing to be done for `src/formats/CMakeFiles/MCDLformat.dir/build'. >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles 1 >[ 36%] Built target MCDLformat >make -f src/formats/CMakeFiles/MNAformat.dir/build.make src/formats/CMakeFiles/MNAformat.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/MNAformat.dir/DependInfo.cmake --color= >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f src/formats/CMakeFiles/MNAformat.dir/build.make src/formats/CMakeFiles/MNAformat.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >make[2]: Nothing to be done for `src/formats/CMakeFiles/MNAformat.dir/build'. >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 36%] Built target MNAformat >make -f src/formats/CMakeFiles/PQSformat.dir/build.make src/formats/CMakeFiles/PQSformat.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/PQSformat.dir/DependInfo.cmake --color= >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f src/formats/CMakeFiles/PQSformat.dir/build.make src/formats/CMakeFiles/PQSformat.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >make[2]: Nothing to be done for `src/formats/CMakeFiles/PQSformat.dir/build'. >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 36%] Built target PQSformat >make -f src/formats/CMakeFiles/abinitformat.dir/build.make src/formats/CMakeFiles/abinitformat.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/abinitformat.dir/DependInfo.cmake --color= >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f src/formats/CMakeFiles/abinitformat.dir/build.make src/formats/CMakeFiles/abinitformat.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >make[2]: Nothing to be done for `src/formats/CMakeFiles/abinitformat.dir/build'. >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles 2 >[ 37%] Built target abinitformat >make -f src/formats/CMakeFiles/acesformat.dir/build.make src/formats/CMakeFiles/acesformat.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/acesformat.dir/DependInfo.cmake --color= >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f src/formats/CMakeFiles/acesformat.dir/build.make src/formats/CMakeFiles/acesformat.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >make[2]: Nothing to be done for `src/formats/CMakeFiles/acesformat.dir/build'. >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 37%] Built target acesformat >make -f src/formats/CMakeFiles/acrformat.dir/build.make src/formats/CMakeFiles/acrformat.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/acrformat.dir/DependInfo.cmake --color= >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f src/formats/CMakeFiles/acrformat.dir/build.make src/formats/CMakeFiles/acrformat.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >make[2]: Nothing to be done for `src/formats/CMakeFiles/acrformat.dir/build'. >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 37%] Built target acrformat >make -f src/formats/CMakeFiles/adfformat.dir/build.make src/formats/CMakeFiles/adfformat.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/adfformat.dir/DependInfo.cmake --color= >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f src/formats/CMakeFiles/adfformat.dir/build.make src/formats/CMakeFiles/adfformat.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >make[2]: Nothing to be done for `src/formats/CMakeFiles/adfformat.dir/build'. >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles 3 >[ 38%] Built target adfformat >make -f src/formats/CMakeFiles/alchemyformat.dir/build.make src/formats/CMakeFiles/alchemyformat.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/alchemyformat.dir/DependInfo.cmake --color= >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f src/formats/CMakeFiles/alchemyformat.dir/build.make src/formats/CMakeFiles/alchemyformat.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >make[2]: Nothing to be done for `src/formats/CMakeFiles/alchemyformat.dir/build'. >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 38%] Built target alchemyformat >make -f src/formats/CMakeFiles/amberformat.dir/build.make src/formats/CMakeFiles/amberformat.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/amberformat.dir/DependInfo.cmake --color= >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f src/formats/CMakeFiles/amberformat.dir/build.make src/formats/CMakeFiles/amberformat.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >make[2]: Nothing to be done for `src/formats/CMakeFiles/amberformat.dir/build'. >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 38%] Built target amberformat >make -f src/formats/CMakeFiles/asciiformat.dir/build.make src/formats/CMakeFiles/asciiformat.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/asciiformat.dir/DependInfo.cmake --color= >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f src/formats/CMakeFiles/asciiformat.dir/build.make src/formats/CMakeFiles/asciiformat.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >make[2]: Nothing to be done for `src/formats/CMakeFiles/asciiformat.dir/build'. >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles 4 >[ 39%] Built target asciiformat >make -f src/formats/CMakeFiles/balstformat.dir/build.make src/formats/CMakeFiles/balstformat.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/balstformat.dir/DependInfo.cmake --color= >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f src/formats/CMakeFiles/balstformat.dir/build.make src/formats/CMakeFiles/balstformat.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >make[2]: Nothing to be done for `src/formats/CMakeFiles/balstformat.dir/build'. >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles 5 >[ 40%] Built target balstformat >make -f src/formats/CMakeFiles/bgfformat.dir/build.make src/formats/CMakeFiles/bgfformat.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/bgfformat.dir/DependInfo.cmake --color= >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f src/formats/CMakeFiles/bgfformat.dir/build.make src/formats/CMakeFiles/bgfformat.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >make[2]: Nothing to be done for `src/formats/CMakeFiles/bgfformat.dir/build'. >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 40%] Built target bgfformat >make -f src/formats/CMakeFiles/boxformat.dir/build.make src/formats/CMakeFiles/boxformat.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/boxformat.dir/DependInfo.cmake --color= >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f src/formats/CMakeFiles/boxformat.dir/build.make src/formats/CMakeFiles/boxformat.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >make[2]: Nothing to be done for `src/formats/CMakeFiles/boxformat.dir/build'. >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles 7 >[ 41%] Built target boxformat >make -f src/formats/CMakeFiles/cacaoformat.dir/build.make src/formats/CMakeFiles/cacaoformat.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/cacaoformat.dir/DependInfo.cmake --color= >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f src/formats/CMakeFiles/cacaoformat.dir/build.make src/formats/CMakeFiles/cacaoformat.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >make[2]: Nothing to be done for `src/formats/CMakeFiles/cacaoformat.dir/build'. >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 41%] Built target cacaoformat >make -f src/formats/CMakeFiles/cacheformat.dir/build.make src/formats/CMakeFiles/cacheformat.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/cacheformat.dir/DependInfo.cmake --color= >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f src/formats/CMakeFiles/cacheformat.dir/build.make src/formats/CMakeFiles/cacheformat.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >make[2]: Nothing to be done for `src/formats/CMakeFiles/cacheformat.dir/build'. >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 41%] Built target cacheformat >make -f src/formats/CMakeFiles/carformat.dir/build.make src/formats/CMakeFiles/carformat.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/carformat.dir/DependInfo.cmake --color= >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f src/formats/CMakeFiles/carformat.dir/build.make src/formats/CMakeFiles/carformat.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >make[2]: Nothing to be done for `src/formats/CMakeFiles/carformat.dir/build'. >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles 8 >[ 42%] Built target carformat >make -f src/formats/CMakeFiles/castepformat.dir/build.make src/formats/CMakeFiles/castepformat.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/castepformat.dir/DependInfo.cmake --color= >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f src/formats/CMakeFiles/castepformat.dir/build.make src/formats/CMakeFiles/castepformat.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >make[2]: Nothing to be done for `src/formats/CMakeFiles/castepformat.dir/build'. >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 42%] Built target castepformat >make -f src/formats/CMakeFiles/cccformat.dir/build.make src/formats/CMakeFiles/cccformat.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/cccformat.dir/DependInfo.cmake --color= >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f src/formats/CMakeFiles/cccformat.dir/build.make src/formats/CMakeFiles/cccformat.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >make[2]: Nothing to be done for `src/formats/CMakeFiles/cccformat.dir/build'. >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 42%] Built target cccformat >make -f src/formats/CMakeFiles/cdxmlformat.dir/build.make src/formats/CMakeFiles/cdxmlformat.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/cdxmlformat.dir/DependInfo.cmake --color= >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f src/formats/CMakeFiles/cdxmlformat.dir/build.make src/formats/CMakeFiles/cdxmlformat.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >make[2]: Nothing to be done for `src/formats/CMakeFiles/cdxmlformat.dir/build'. >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles 9 >[ 43%] Built target cdxmlformat >make -f src/formats/CMakeFiles/chem3dformat.dir/build.make src/formats/CMakeFiles/chem3dformat.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/chem3dformat.dir/DependInfo.cmake --color= >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f src/formats/CMakeFiles/chem3dformat.dir/build.make src/formats/CMakeFiles/chem3dformat.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >make[2]: Nothing to be done for `src/formats/CMakeFiles/chem3dformat.dir/build'. >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles 10 >[ 44%] Built target chem3dformat >make -f src/formats/CMakeFiles/chemdrawcdx.dir/build.make src/formats/CMakeFiles/chemdrawcdx.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/chemdrawcdx.dir/DependInfo.cmake --color= >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f src/formats/CMakeFiles/chemdrawcdx.dir/build.make src/formats/CMakeFiles/chemdrawcdx.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >make[2]: Nothing to be done for `src/formats/CMakeFiles/chemdrawcdx.dir/build'. >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 44%] Built target chemdrawcdx >make -f src/formats/CMakeFiles/chemdrawct.dir/build.make src/formats/CMakeFiles/chemdrawct.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/chemdrawct.dir/DependInfo.cmake --color= >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f src/formats/CMakeFiles/chemdrawct.dir/build.make src/formats/CMakeFiles/chemdrawct.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >make[2]: Nothing to be done for `src/formats/CMakeFiles/chemdrawct.dir/build'. >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 44%] Built target chemdrawct >make -f src/formats/CMakeFiles/chemkinformat.dir/build.make src/formats/CMakeFiles/chemkinformat.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/chemkinformat.dir/DependInfo.cmake --color= >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f src/formats/CMakeFiles/chemkinformat.dir/build.make src/formats/CMakeFiles/chemkinformat.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >make[2]: Nothing to be done for `src/formats/CMakeFiles/chemkinformat.dir/build'. >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles 11 >[ 45%] Built target chemkinformat >make -f src/formats/CMakeFiles/chemtoolformat.dir/build.make src/formats/CMakeFiles/chemtoolformat.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/chemtoolformat.dir/DependInfo.cmake --color= >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f src/formats/CMakeFiles/chemtoolformat.dir/build.make src/formats/CMakeFiles/chemtoolformat.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >make[2]: Nothing to be done for `src/formats/CMakeFiles/chemtoolformat.dir/build'. >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 45%] Built target chemtoolformat >make -f src/formats/CMakeFiles/cifformat.dir/build.make src/formats/CMakeFiles/cifformat.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/cifformat.dir/DependInfo.cmake --color= >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f src/formats/CMakeFiles/cifformat.dir/build.make src/formats/CMakeFiles/cifformat.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >make[2]: Nothing to be done for `src/formats/CMakeFiles/cifformat.dir/build'. >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 45%] Built target cifformat >make -f src/formats/CMakeFiles/cmlformat.dir/build.make src/formats/CMakeFiles/cmlformat.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/cmlformat.dir/DependInfo.cmake --color= >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f src/formats/CMakeFiles/cmlformat.dir/build.make src/formats/CMakeFiles/cmlformat.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >make[2]: Nothing to be done for `src/formats/CMakeFiles/cmlformat.dir/build'. >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles 12 >[ 46%] Built target cmlformat >make -f src/formats/CMakeFiles/cmlreactformat.dir/build.make src/formats/CMakeFiles/cmlreactformat.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/cmlreactformat.dir/DependInfo.cmake --color= >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f src/formats/CMakeFiles/cmlreactformat.dir/build.make src/formats/CMakeFiles/cmlreactformat.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >make[2]: Nothing to be done for `src/formats/CMakeFiles/cmlreactformat.dir/build'. >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles 13 >[ 47%] Built target cmlreactformat >make -f src/formats/CMakeFiles/copyformat.dir/build.make src/formats/CMakeFiles/copyformat.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/copyformat.dir/DependInfo.cmake --color= >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f src/formats/CMakeFiles/copyformat.dir/build.make src/formats/CMakeFiles/copyformat.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >make[2]: Nothing to be done for `src/formats/CMakeFiles/copyformat.dir/build'. >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 47%] Built target copyformat >make -f src/formats/CMakeFiles/crkformat.dir/build.make src/formats/CMakeFiles/crkformat.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/crkformat.dir/DependInfo.cmake --color= >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f src/formats/CMakeFiles/crkformat.dir/build.make src/formats/CMakeFiles/crkformat.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >make[2]: Nothing to be done for `src/formats/CMakeFiles/crkformat.dir/build'. >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 47%] Built target crkformat >make -f src/formats/CMakeFiles/crystal09format.dir/build.make src/formats/CMakeFiles/crystal09format.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/crystal09format.dir/DependInfo.cmake --color= >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f src/formats/CMakeFiles/crystal09format.dir/build.make src/formats/CMakeFiles/crystal09format.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >make[2]: Nothing to be done for `src/formats/CMakeFiles/crystal09format.dir/build'. >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles 14 >[ 48%] Built target crystal09format >make -f src/formats/CMakeFiles/cssrformat.dir/build.make src/formats/CMakeFiles/cssrformat.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/cssrformat.dir/DependInfo.cmake --color= >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f src/formats/CMakeFiles/cssrformat.dir/build.make src/formats/CMakeFiles/cssrformat.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >make[2]: Nothing to be done for `src/formats/CMakeFiles/cssrformat.dir/build'. >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 48%] Built target cssrformat >make -f src/formats/CMakeFiles/dlpolyformat.dir/build.make src/formats/CMakeFiles/dlpolyformat.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/dlpolyformat.dir/DependInfo.cmake --color= >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f src/formats/CMakeFiles/dlpolyformat.dir/build.make src/formats/CMakeFiles/dlpolyformat.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >make[2]: Nothing to be done for `src/formats/CMakeFiles/dlpolyformat.dir/build'. >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 48%] Built target dlpolyformat >make -f src/formats/CMakeFiles/dmolformat.dir/build.make src/formats/CMakeFiles/dmolformat.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/dmolformat.dir/DependInfo.cmake --color= >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f src/formats/CMakeFiles/dmolformat.dir/build.make src/formats/CMakeFiles/dmolformat.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >make[2]: Nothing to be done for `src/formats/CMakeFiles/dmolformat.dir/build'. >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles 15 >[ 49%] Built target dmolformat >make -f src/formats/CMakeFiles/fastaformat.dir/build.make src/formats/CMakeFiles/fastaformat.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/fastaformat.dir/DependInfo.cmake --color= >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f src/formats/CMakeFiles/fastaformat.dir/build.make src/formats/CMakeFiles/fastaformat.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >make[2]: Nothing to be done for `src/formats/CMakeFiles/fastaformat.dir/build'. >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 49%] Built target fastaformat >make -f src/formats/CMakeFiles/fastsearchformat.dir/build.make src/formats/CMakeFiles/fastsearchformat.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/fastsearchformat.dir/DependInfo.cmake --color= >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f src/formats/CMakeFiles/fastsearchformat.dir/build.make src/formats/CMakeFiles/fastsearchformat.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >make[2]: Nothing to be done for `src/formats/CMakeFiles/fastsearchformat.dir/build'. >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 49%] Built target fastsearchformat >make -f src/formats/CMakeFiles/fchkformat.dir/build.make src/formats/CMakeFiles/fchkformat.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/fchkformat.dir/DependInfo.cmake --color= >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f src/formats/CMakeFiles/fchkformat.dir/build.make src/formats/CMakeFiles/fchkformat.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >make[2]: Nothing to be done for `src/formats/CMakeFiles/fchkformat.dir/build'. >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles 16 >[ 50%] Built target fchkformat >make -f src/formats/CMakeFiles/featformat.dir/build.make src/formats/CMakeFiles/featformat.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/featformat.dir/DependInfo.cmake --color= >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f src/formats/CMakeFiles/featformat.dir/build.make src/formats/CMakeFiles/featformat.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >make[2]: Nothing to be done for `src/formats/CMakeFiles/featformat.dir/build'. >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 50%] Built target featformat >make -f src/formats/CMakeFiles/fhformat.dir/build.make src/formats/CMakeFiles/fhformat.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/fhformat.dir/DependInfo.cmake --color= >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f src/formats/CMakeFiles/fhformat.dir/build.make src/formats/CMakeFiles/fhformat.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >make[2]: Nothing to be done for `src/formats/CMakeFiles/fhformat.dir/build'. >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 50%] Built target fhformat >make -f src/formats/CMakeFiles/fhiaimsformat.dir/build.make src/formats/CMakeFiles/fhiaimsformat.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/fhiaimsformat.dir/DependInfo.cmake --color= >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f src/formats/CMakeFiles/fhiaimsformat.dir/build.make src/formats/CMakeFiles/fhiaimsformat.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >make[2]: Nothing to be done for `src/formats/CMakeFiles/fhiaimsformat.dir/build'. >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles 17 >[ 51%] Built target fhiaimsformat >make -f src/formats/CMakeFiles/fingerprintformat.dir/build.make src/formats/CMakeFiles/fingerprintformat.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/fingerprintformat.dir/DependInfo.cmake --color= >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f src/formats/CMakeFiles/fingerprintformat.dir/build.make src/formats/CMakeFiles/fingerprintformat.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >make[2]: Nothing to be done for `src/formats/CMakeFiles/fingerprintformat.dir/build'. >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 51%] Built target fingerprintformat >make -f src/formats/CMakeFiles/fpsformat.dir/build.make src/formats/CMakeFiles/fpsformat.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/fpsformat.dir/DependInfo.cmake --color= >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f src/formats/CMakeFiles/fpsformat.dir/build.make src/formats/CMakeFiles/fpsformat.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >make[2]: Nothing to be done for `src/formats/CMakeFiles/fpsformat.dir/build'. >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 51%] Built target fpsformat >make -f src/formats/CMakeFiles/freefracformat.dir/build.make src/formats/CMakeFiles/freefracformat.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/freefracformat.dir/DependInfo.cmake --color= >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f src/formats/CMakeFiles/freefracformat.dir/build.make src/formats/CMakeFiles/freefracformat.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >make[2]: Nothing to be done for `src/formats/CMakeFiles/freefracformat.dir/build'. >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles 18 >[ 52%] Built target freefracformat >make -f src/formats/CMakeFiles/gamessformat.dir/build.make src/formats/CMakeFiles/gamessformat.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/gamessformat.dir/DependInfo.cmake --color= >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f src/formats/CMakeFiles/gamessformat.dir/build.make src/formats/CMakeFiles/gamessformat.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >make[2]: Nothing to be done for `src/formats/CMakeFiles/gamessformat.dir/build'. >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 52%] Built target gamessformat >make -f src/formats/CMakeFiles/gamessukformat.dir/build.make src/formats/CMakeFiles/gamessukformat.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/gamessukformat.dir/DependInfo.cmake --color= >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f src/formats/CMakeFiles/gamessukformat.dir/build.make src/formats/CMakeFiles/gamessukformat.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >make[2]: Nothing to be done for `src/formats/CMakeFiles/gamessukformat.dir/build'. >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 52%] Built target gamessukformat >make -f src/formats/CMakeFiles/gausscubeformat.dir/build.make src/formats/CMakeFiles/gausscubeformat.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/gausscubeformat.dir/DependInfo.cmake --color= >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f src/formats/CMakeFiles/gausscubeformat.dir/build.make src/formats/CMakeFiles/gausscubeformat.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >make[2]: Nothing to be done for `src/formats/CMakeFiles/gausscubeformat.dir/build'. >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles 19 >[ 53%] Built target gausscubeformat >make -f src/formats/CMakeFiles/gaussformat.dir/build.make src/formats/CMakeFiles/gaussformat.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/gaussformat.dir/DependInfo.cmake --color= >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f src/formats/CMakeFiles/gaussformat.dir/build.make src/formats/CMakeFiles/gaussformat.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >make[2]: Nothing to be done for `src/formats/CMakeFiles/gaussformat.dir/build'. >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 53%] Built target gaussformat >make -f src/formats/CMakeFiles/gausszmatformat.dir/build.make src/formats/CMakeFiles/gausszmatformat.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/gausszmatformat.dir/DependInfo.cmake --color= >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f src/formats/CMakeFiles/gausszmatformat.dir/build.make src/formats/CMakeFiles/gausszmatformat.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >make[2]: Nothing to be done for `src/formats/CMakeFiles/gausszmatformat.dir/build'. >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles 20 >[ 54%] Built target gausszmatformat >make -f src/formats/CMakeFiles/ghemicalformat.dir/build.make src/formats/CMakeFiles/ghemicalformat.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/ghemicalformat.dir/DependInfo.cmake --color= >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f src/formats/CMakeFiles/ghemicalformat.dir/build.make src/formats/CMakeFiles/ghemicalformat.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >make[2]: Nothing to be done for `src/formats/CMakeFiles/ghemicalformat.dir/build'. >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 54%] Built target ghemicalformat >make -f src/formats/CMakeFiles/groformat.dir/build.make src/formats/CMakeFiles/groformat.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/groformat.dir/DependInfo.cmake --color= >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f src/formats/CMakeFiles/groformat.dir/build.make src/formats/CMakeFiles/groformat.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >make[2]: Nothing to be done for `src/formats/CMakeFiles/groformat.dir/build'. >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 54%] Built target groformat >make -f src/formats/CMakeFiles/gromos96format.dir/build.make src/formats/CMakeFiles/gromos96format.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/gromos96format.dir/DependInfo.cmake --color= >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f src/formats/CMakeFiles/gromos96format.dir/build.make src/formats/CMakeFiles/gromos96format.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >make[2]: Nothing to be done for `src/formats/CMakeFiles/gromos96format.dir/build'. >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles 21 >[ 55%] Built target gromos96format >make -f src/formats/CMakeFiles/gulpformat.dir/build.make src/formats/CMakeFiles/gulpformat.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/gulpformat.dir/DependInfo.cmake --color= >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f src/formats/CMakeFiles/gulpformat.dir/build.make src/formats/CMakeFiles/gulpformat.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >make[2]: Nothing to be done for `src/formats/CMakeFiles/gulpformat.dir/build'. >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 55%] Built target gulpformat >make -f src/formats/CMakeFiles/hinformat.dir/build.make src/formats/CMakeFiles/hinformat.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/hinformat.dir/DependInfo.cmake --color= >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f src/formats/CMakeFiles/hinformat.dir/build.make src/formats/CMakeFiles/hinformat.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >make[2]: Nothing to be done for `src/formats/CMakeFiles/hinformat.dir/build'. >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 55%] Built target hinformat >make -f src/formats/CMakeFiles/inchiformat.dir/build.make src/formats/CMakeFiles/inchiformat.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/inchiformat.dir/DependInfo.cmake --color= >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f src/formats/CMakeFiles/inchiformat.dir/build.make src/formats/CMakeFiles/inchiformat.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >make[2]: Nothing to be done for `src/formats/CMakeFiles/inchiformat.dir/build'. >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles 22 >[ 56%] Built target inchiformat >make -f src/formats/CMakeFiles/jaguarformat.dir/build.make src/formats/CMakeFiles/jaguarformat.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/jaguarformat.dir/DependInfo.cmake --color= >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f src/formats/CMakeFiles/jaguarformat.dir/build.make src/formats/CMakeFiles/jaguarformat.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >make[2]: Nothing to be done for `src/formats/CMakeFiles/jaguarformat.dir/build'. >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles 23 >[ 57%] Built target jaguarformat >make -f src/formats/CMakeFiles/lmpdatformat.dir/build.make src/formats/CMakeFiles/lmpdatformat.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/lmpdatformat.dir/DependInfo.cmake --color= >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f src/formats/CMakeFiles/lmpdatformat.dir/build.make src/formats/CMakeFiles/lmpdatformat.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >make[2]: Nothing to be done for `src/formats/CMakeFiles/lmpdatformat.dir/build'. >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 57%] Built target lmpdatformat >make -f src/formats/CMakeFiles/mdlformat.dir/build.make src/formats/CMakeFiles/mdlformat.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/mdlformat.dir/DependInfo.cmake --color= >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f src/formats/CMakeFiles/mdlformat.dir/build.make src/formats/CMakeFiles/mdlformat.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >make[2]: Nothing to be done for `src/formats/CMakeFiles/mdlformat.dir/build'. >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 57%] Built target mdlformat >make -f src/formats/CMakeFiles/mmcifformat.dir/build.make src/formats/CMakeFiles/mmcifformat.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/mmcifformat.dir/DependInfo.cmake --color= >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f src/formats/CMakeFiles/mmcifformat.dir/build.make src/formats/CMakeFiles/mmcifformat.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >make[2]: Nothing to be done for `src/formats/CMakeFiles/mmcifformat.dir/build'. >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles 24 >[ 58%] Built target mmcifformat >make -f src/formats/CMakeFiles/mmodformat.dir/build.make src/formats/CMakeFiles/mmodformat.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/mmodformat.dir/DependInfo.cmake --color= >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f src/formats/CMakeFiles/mmodformat.dir/build.make src/formats/CMakeFiles/mmodformat.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >make[2]: Nothing to be done for `src/formats/CMakeFiles/mmodformat.dir/build'. >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 58%] Built target mmodformat >make -f src/formats/CMakeFiles/mol2format.dir/build.make src/formats/CMakeFiles/mol2format.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/mol2format.dir/DependInfo.cmake --color= >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f src/formats/CMakeFiles/mol2format.dir/build.make src/formats/CMakeFiles/mol2format.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >make[2]: Nothing to be done for `src/formats/CMakeFiles/mol2format.dir/build'. >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 58%] Built target mol2format >make -f src/formats/CMakeFiles/moldenformat.dir/build.make src/formats/CMakeFiles/moldenformat.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/moldenformat.dir/DependInfo.cmake --color= >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f src/formats/CMakeFiles/moldenformat.dir/build.make src/formats/CMakeFiles/moldenformat.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >make[2]: Nothing to be done for `src/formats/CMakeFiles/moldenformat.dir/build'. >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles 25 >[ 59%] Built target moldenformat >make -f src/formats/CMakeFiles/molproformat.dir/build.make src/formats/CMakeFiles/molproformat.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/molproformat.dir/DependInfo.cmake --color= >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f src/formats/CMakeFiles/molproformat.dir/build.make src/formats/CMakeFiles/molproformat.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >make[2]: Nothing to be done for `src/formats/CMakeFiles/molproformat.dir/build'. >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 59%] Built target molproformat >make -f src/formats/CMakeFiles/molreport.dir/build.make src/formats/CMakeFiles/molreport.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/molreport.dir/DependInfo.cmake --color= >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f src/formats/CMakeFiles/molreport.dir/build.make src/formats/CMakeFiles/molreport.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >make[2]: Nothing to be done for `src/formats/CMakeFiles/molreport.dir/build'. >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 59%] Built target molreport >make -f src/formats/CMakeFiles/mopacformat.dir/build.make src/formats/CMakeFiles/mopacformat.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/mopacformat.dir/DependInfo.cmake --color= >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f src/formats/CMakeFiles/mopacformat.dir/build.make src/formats/CMakeFiles/mopacformat.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >make[2]: Nothing to be done for `src/formats/CMakeFiles/mopacformat.dir/build'. >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles 26 >[ 60%] Built target mopacformat >make -f src/formats/CMakeFiles/mpdformat.dir/build.make src/formats/CMakeFiles/mpdformat.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/mpdformat.dir/DependInfo.cmake --color= >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f src/formats/CMakeFiles/mpdformat.dir/build.make src/formats/CMakeFiles/mpdformat.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >make[2]: Nothing to be done for `src/formats/CMakeFiles/mpdformat.dir/build'. >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 60%] Built target mpdformat >make -f src/formats/CMakeFiles/mpqcformat.dir/build.make src/formats/CMakeFiles/mpqcformat.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/mpqcformat.dir/DependInfo.cmake --color= >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f src/formats/CMakeFiles/mpqcformat.dir/build.make src/formats/CMakeFiles/mpqcformat.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >make[2]: Nothing to be done for `src/formats/CMakeFiles/mpqcformat.dir/build'. >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 60%] Built target mpqcformat >make -f src/formats/CMakeFiles/msiformat.dir/build.make src/formats/CMakeFiles/msiformat.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/msiformat.dir/DependInfo.cmake --color= >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f src/formats/CMakeFiles/msiformat.dir/build.make src/formats/CMakeFiles/msiformat.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >make[2]: Nothing to be done for `src/formats/CMakeFiles/msiformat.dir/build'. >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles 27 >[ 61%] Built target msiformat >make -f src/formats/CMakeFiles/msmsformat.dir/build.make src/formats/CMakeFiles/msmsformat.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/msmsformat.dir/DependInfo.cmake --color= >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f src/formats/CMakeFiles/msmsformat.dir/build.make src/formats/CMakeFiles/msmsformat.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >make[2]: Nothing to be done for `src/formats/CMakeFiles/msmsformat.dir/build'. >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 61%] Built target msmsformat >make -f src/formats/CMakeFiles/nulformat.dir/build.make src/formats/CMakeFiles/nulformat.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/nulformat.dir/DependInfo.cmake --color= >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f src/formats/CMakeFiles/nulformat.dir/build.make src/formats/CMakeFiles/nulformat.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >make[2]: Nothing to be done for `src/formats/CMakeFiles/nulformat.dir/build'. >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 61%] Built target nulformat >make -f src/formats/CMakeFiles/nwchemformat.dir/build.make src/formats/CMakeFiles/nwchemformat.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/nwchemformat.dir/DependInfo.cmake --color= >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f src/formats/CMakeFiles/nwchemformat.dir/build.make src/formats/CMakeFiles/nwchemformat.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >make[2]: Nothing to be done for `src/formats/CMakeFiles/nwchemformat.dir/build'. >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles 28 >[ 62%] Built target nwchemformat >make -f src/formats/CMakeFiles/opendxformat.dir/build.make src/formats/CMakeFiles/opendxformat.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/opendxformat.dir/DependInfo.cmake --color= >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f src/formats/CMakeFiles/opendxformat.dir/build.make src/formats/CMakeFiles/opendxformat.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >make[2]: Nothing to be done for `src/formats/CMakeFiles/opendxformat.dir/build'. >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 62%] Built target opendxformat >make -f src/formats/CMakeFiles/outformat.dir/build.make src/formats/CMakeFiles/outformat.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/outformat.dir/DependInfo.cmake --color= >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f src/formats/CMakeFiles/outformat.dir/build.make src/formats/CMakeFiles/outformat.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >make[2]: Nothing to be done for `src/formats/CMakeFiles/outformat.dir/build'. >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles 57 >[ 63%] Built target outformat >make -f src/formats/CMakeFiles/pcmodelformat.dir/build.make src/formats/CMakeFiles/pcmodelformat.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/pcmodelformat.dir/DependInfo.cmake --color= >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f src/formats/CMakeFiles/pcmodelformat.dir/build.make src/formats/CMakeFiles/pcmodelformat.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >make[2]: Nothing to be done for `src/formats/CMakeFiles/pcmodelformat.dir/build'. >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 63%] Built target pcmodelformat >make -f src/formats/CMakeFiles/pdbformat.dir/build.make src/formats/CMakeFiles/pdbformat.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/pdbformat.dir/DependInfo.cmake --color= >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f src/formats/CMakeFiles/pdbformat.dir/build.make src/formats/CMakeFiles/pdbformat.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >make[2]: Nothing to be done for `src/formats/CMakeFiles/pdbformat.dir/build'. >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 63%] Built target pdbformat >make -f src/formats/CMakeFiles/pdbqtformat.dir/build.make src/formats/CMakeFiles/pdbqtformat.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/pdbqtformat.dir/DependInfo.cmake --color= >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f src/formats/CMakeFiles/pdbqtformat.dir/build.make src/formats/CMakeFiles/pdbqtformat.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >make[2]: Nothing to be done for `src/formats/CMakeFiles/pdbqtformat.dir/build'. >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles 58 >[ 64%] Built target pdbqtformat >make -f src/formats/CMakeFiles/png2format.dir/build.make src/formats/CMakeFiles/png2format.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/png2format.dir/DependInfo.cmake --color= >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f src/formats/CMakeFiles/png2format.dir/build.make src/formats/CMakeFiles/png2format.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >make[2]: Nothing to be done for `src/formats/CMakeFiles/png2format.dir/build'. >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 64%] Built target png2format >make -f src/formats/CMakeFiles/pngformat.dir/build.make src/formats/CMakeFiles/pngformat.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/pngformat.dir/DependInfo.cmake --color= >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f src/formats/CMakeFiles/pngformat.dir/build.make src/formats/CMakeFiles/pngformat.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >make[2]: Nothing to be done for `src/formats/CMakeFiles/pngformat.dir/build'. >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles 72 >[ 65%] Built target pngformat >make -f src/formats/CMakeFiles/posformat.dir/build.make src/formats/CMakeFiles/posformat.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/posformat.dir/DependInfo.cmake --color= >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f src/formats/CMakeFiles/posformat.dir/build.make src/formats/CMakeFiles/posformat.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >make[2]: Nothing to be done for `src/formats/CMakeFiles/posformat.dir/build'. >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 65%] Built target posformat >make -f src/formats/CMakeFiles/povrayformat.dir/build.make src/formats/CMakeFiles/povrayformat.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/povrayformat.dir/DependInfo.cmake --color= >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f src/formats/CMakeFiles/povrayformat.dir/build.make src/formats/CMakeFiles/povrayformat.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >make[2]: Nothing to be done for `src/formats/CMakeFiles/povrayformat.dir/build'. >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 65%] Built target povrayformat >make -f src/formats/CMakeFiles/pqrformat.dir/build.make src/formats/CMakeFiles/pqrformat.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/pqrformat.dir/DependInfo.cmake --color= >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f src/formats/CMakeFiles/pqrformat.dir/build.make src/formats/CMakeFiles/pqrformat.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >make[2]: Nothing to be done for `src/formats/CMakeFiles/pqrformat.dir/build'. >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles 73 >[ 66%] Built target pqrformat >make -f src/formats/CMakeFiles/pubchem.dir/build.make src/formats/CMakeFiles/pubchem.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/pubchem.dir/DependInfo.cmake --color= >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f src/formats/CMakeFiles/pubchem.dir/build.make src/formats/CMakeFiles/pubchem.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >make[2]: Nothing to be done for `src/formats/CMakeFiles/pubchem.dir/build'. >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 66%] Built target pubchem >make -f src/formats/CMakeFiles/pwscfformat.dir/build.make src/formats/CMakeFiles/pwscfformat.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/pwscfformat.dir/DependInfo.cmake --color= >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f src/formats/CMakeFiles/pwscfformat.dir/build.make src/formats/CMakeFiles/pwscfformat.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >make[2]: Nothing to be done for `src/formats/CMakeFiles/pwscfformat.dir/build'. >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles 74 >[ 67%] Built target pwscfformat >make -f src/formats/CMakeFiles/qchemformat.dir/build.make src/formats/CMakeFiles/qchemformat.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/qchemformat.dir/DependInfo.cmake --color= >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f src/formats/CMakeFiles/qchemformat.dir/build.make src/formats/CMakeFiles/qchemformat.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >make[2]: Nothing to be done for `src/formats/CMakeFiles/qchemformat.dir/build'. >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 67%] Built target qchemformat >make -f src/formats/CMakeFiles/reportformat.dir/build.make src/formats/CMakeFiles/reportformat.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/reportformat.dir/DependInfo.cmake --color= >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f src/formats/CMakeFiles/reportformat.dir/build.make src/formats/CMakeFiles/reportformat.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >make[2]: Nothing to be done for `src/formats/CMakeFiles/reportformat.dir/build'. >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 67%] Built target reportformat >make -f src/formats/CMakeFiles/rsmiformat.dir/build.make src/formats/CMakeFiles/rsmiformat.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/rsmiformat.dir/DependInfo.cmake --color= >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f src/formats/CMakeFiles/rsmiformat.dir/build.make src/formats/CMakeFiles/rsmiformat.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >make[2]: Nothing to be done for `src/formats/CMakeFiles/rsmiformat.dir/build'. >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 67%] Built target rsmiformat >make -f src/formats/CMakeFiles/rxnformat.dir/build.make src/formats/CMakeFiles/rxnformat.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/rxnformat.dir/DependInfo.cmake --color= >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f src/formats/CMakeFiles/rxnformat.dir/build.make src/formats/CMakeFiles/rxnformat.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >make[2]: Nothing to be done for `src/formats/CMakeFiles/rxnformat.dir/build'. >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 67%] Built target rxnformat >make -f src/formats/CMakeFiles/shelxformat.dir/build.make src/formats/CMakeFiles/shelxformat.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/shelxformat.dir/DependInfo.cmake --color= >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f src/formats/CMakeFiles/shelxformat.dir/build.make src/formats/CMakeFiles/shelxformat.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >make[2]: Nothing to be done for `src/formats/CMakeFiles/shelxformat.dir/build'. >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles 76 >[ 68%] Built target shelxformat >make -f src/formats/CMakeFiles/smilesformat.dir/build.make src/formats/CMakeFiles/smilesformat.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/smilesformat.dir/DependInfo.cmake --color= >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f src/formats/CMakeFiles/smilesformat.dir/build.make src/formats/CMakeFiles/smilesformat.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >make[2]: Nothing to be done for `src/formats/CMakeFiles/smilesformat.dir/build'. >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 68%] Built target smilesformat >make -f src/formats/CMakeFiles/svgformat.dir/build.make src/formats/CMakeFiles/svgformat.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/svgformat.dir/DependInfo.cmake --color= >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f src/formats/CMakeFiles/svgformat.dir/build.make src/formats/CMakeFiles/svgformat.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >make[2]: Nothing to be done for `src/formats/CMakeFiles/svgformat.dir/build'. >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 68%] Built target svgformat >make -f src/formats/CMakeFiles/textformat.dir/build.make src/formats/CMakeFiles/textformat.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/textformat.dir/DependInfo.cmake --color= >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f src/formats/CMakeFiles/textformat.dir/build.make src/formats/CMakeFiles/textformat.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >make[2]: Nothing to be done for `src/formats/CMakeFiles/textformat.dir/build'. >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 68%] Built target textformat >make -f src/formats/CMakeFiles/thermoformat.dir/build.make src/formats/CMakeFiles/thermoformat.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/thermoformat.dir/DependInfo.cmake --color= >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f src/formats/CMakeFiles/thermoformat.dir/build.make src/formats/CMakeFiles/thermoformat.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >make[2]: Nothing to be done for `src/formats/CMakeFiles/thermoformat.dir/build'. >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles 95 >[ 69%] Built target thermoformat >make -f src/formats/CMakeFiles/tinkerformat.dir/build.make src/formats/CMakeFiles/tinkerformat.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/tinkerformat.dir/DependInfo.cmake --color= >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f src/formats/CMakeFiles/tinkerformat.dir/build.make src/formats/CMakeFiles/tinkerformat.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >make[2]: Nothing to be done for `src/formats/CMakeFiles/tinkerformat.dir/build'. >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 69%] Built target tinkerformat >make -f src/formats/CMakeFiles/titleformat.dir/build.make src/formats/CMakeFiles/titleformat.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/titleformat.dir/DependInfo.cmake --color= >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f src/formats/CMakeFiles/titleformat.dir/build.make src/formats/CMakeFiles/titleformat.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >make[2]: Nothing to be done for `src/formats/CMakeFiles/titleformat.dir/build'. >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 69%] Built target titleformat >make -f src/formats/CMakeFiles/turbomoleformat.dir/build.make src/formats/CMakeFiles/turbomoleformat.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/turbomoleformat.dir/DependInfo.cmake --color= >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f src/formats/CMakeFiles/turbomoleformat.dir/build.make src/formats/CMakeFiles/turbomoleformat.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >make[2]: Nothing to be done for `src/formats/CMakeFiles/turbomoleformat.dir/build'. >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles 96 >[ 70%] Built target turbomoleformat >make -f src/formats/CMakeFiles/unichemformat.dir/build.make src/formats/CMakeFiles/unichemformat.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/unichemformat.dir/DependInfo.cmake --color= >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f src/formats/CMakeFiles/unichemformat.dir/build.make src/formats/CMakeFiles/unichemformat.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >make[2]: Nothing to be done for `src/formats/CMakeFiles/unichemformat.dir/build'. >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 70%] Built target unichemformat >make -f src/formats/CMakeFiles/vaspformat.dir/build.make src/formats/CMakeFiles/vaspformat.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/vaspformat.dir/DependInfo.cmake --color= >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f src/formats/CMakeFiles/vaspformat.dir/build.make src/formats/CMakeFiles/vaspformat.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >make[2]: Nothing to be done for `src/formats/CMakeFiles/vaspformat.dir/build'. >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 70%] Built target vaspformat >make -f src/formats/CMakeFiles/viewmolformat.dir/build.make src/formats/CMakeFiles/viewmolformat.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/viewmolformat.dir/DependInfo.cmake --color= >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f src/formats/CMakeFiles/viewmolformat.dir/build.make src/formats/CMakeFiles/viewmolformat.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >make[2]: Nothing to be done for `src/formats/CMakeFiles/viewmolformat.dir/build'. >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles 97 >[ 71%] Built target viewmolformat >make -f src/formats/CMakeFiles/xedformat.dir/build.make src/formats/CMakeFiles/xedformat.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/xedformat.dir/DependInfo.cmake --color= >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f src/formats/CMakeFiles/xedformat.dir/build.make src/formats/CMakeFiles/xedformat.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >make[2]: Nothing to be done for `src/formats/CMakeFiles/xedformat.dir/build'. >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 71%] Built target xedformat >make -f src/formats/CMakeFiles/xmlformat.dir/build.make src/formats/CMakeFiles/xmlformat.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/xmlformat.dir/DependInfo.cmake --color= >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f src/formats/CMakeFiles/xmlformat.dir/build.make src/formats/CMakeFiles/xmlformat.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >make[2]: Nothing to be done for `src/formats/CMakeFiles/xmlformat.dir/build'. >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles 98 >[ 72%] Built target xmlformat >make -f src/formats/CMakeFiles/xsfformat.dir/build.make src/formats/CMakeFiles/xsfformat.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/xsfformat.dir/DependInfo.cmake --color= >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f src/formats/CMakeFiles/xsfformat.dir/build.make src/formats/CMakeFiles/xsfformat.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >make[2]: Nothing to be done for `src/formats/CMakeFiles/xsfformat.dir/build'. >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 72%] Built target xsfformat >make -f src/formats/CMakeFiles/xtcformat.dir/build.make src/formats/CMakeFiles/xtcformat.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/xtcformat.dir/DependInfo.cmake --color= >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f src/formats/CMakeFiles/xtcformat.dir/build.make src/formats/CMakeFiles/xtcformat.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >make[2]: Nothing to be done for `src/formats/CMakeFiles/xtcformat.dir/build'. >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 72%] Built target xtcformat >make -f src/formats/CMakeFiles/xyzformat.dir/build.make src/formats/CMakeFiles/xyzformat.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/xyzformat.dir/DependInfo.cmake --color= >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f src/formats/CMakeFiles/xyzformat.dir/build.make src/formats/CMakeFiles/xyzformat.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >make[2]: Nothing to be done for `src/formats/CMakeFiles/xyzformat.dir/build'. >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles 99 >[ 73%] Built target xyzformat >make -f src/formats/CMakeFiles/yasaraformat.dir/build.make src/formats/CMakeFiles/yasaraformat.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/yasaraformat.dir/DependInfo.cmake --color= >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f src/formats/CMakeFiles/yasaraformat.dir/build.make src/formats/CMakeFiles/yasaraformat.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >make[2]: Nothing to be done for `src/formats/CMakeFiles/yasaraformat.dir/build'. >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 73%] Built target yasaraformat >make -f src/formats/CMakeFiles/zindoformat.dir/build.make src/formats/CMakeFiles/zindoformat.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/formats /builddir/build/BUILD/openbabel-2.3.2/src/formats/CMakeFiles/zindoformat.dir/DependInfo.cmake --color= >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f src/formats/CMakeFiles/zindoformat.dir/build.make src/formats/CMakeFiles/zindoformat.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >make[2]: Nothing to be done for `src/formats/CMakeFiles/zindoformat.dir/build'. >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles 100 >[ 74%] Built target zindoformat >make -f tools/CMakeFiles/babel.dir/build.make tools/CMakeFiles/babel.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/tools /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/tools /builddir/build/BUILD/openbabel-2.3.2/tools/CMakeFiles/babel.dir/DependInfo.cmake --color= >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f tools/CMakeFiles/babel.dir/build.make tools/CMakeFiles/babel.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >make[2]: Nothing to be done for `tools/CMakeFiles/babel.dir/build'. >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 74%] Built target babel >make -f tools/CMakeFiles/obabel.dir/build.make tools/CMakeFiles/obabel.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/tools /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/tools /builddir/build/BUILD/openbabel-2.3.2/tools/CMakeFiles/obabel.dir/DependInfo.cmake --color= >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f tools/CMakeFiles/obabel.dir/build.make tools/CMakeFiles/obabel.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >make[2]: Nothing to be done for `tools/CMakeFiles/obabel.dir/build'. >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 74%] Built target obabel >make -f tools/CMakeFiles/obchiral.dir/build.make tools/CMakeFiles/obchiral.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/tools /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/tools /builddir/build/BUILD/openbabel-2.3.2/tools/CMakeFiles/obchiral.dir/DependInfo.cmake --color= >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f tools/CMakeFiles/obchiral.dir/build.make tools/CMakeFiles/obchiral.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >make[2]: Nothing to be done for `tools/CMakeFiles/obchiral.dir/build'. >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 74%] Built target obchiral >make -f tools/CMakeFiles/obconformer.dir/build.make tools/CMakeFiles/obconformer.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/tools /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/tools /builddir/build/BUILD/openbabel-2.3.2/tools/CMakeFiles/obconformer.dir/DependInfo.cmake --color= >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f tools/CMakeFiles/obconformer.dir/build.make tools/CMakeFiles/obconformer.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >make[2]: Nothing to be done for `tools/CMakeFiles/obconformer.dir/build'. >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles 29 >[ 75%] Built target obconformer >make -f tools/CMakeFiles/obenergy.dir/build.make tools/CMakeFiles/obenergy.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/tools /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/tools /builddir/build/BUILD/openbabel-2.3.2/tools/CMakeFiles/obenergy.dir/DependInfo.cmake --color= >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f tools/CMakeFiles/obenergy.dir/build.make tools/CMakeFiles/obenergy.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >make[2]: Nothing to be done for `tools/CMakeFiles/obenergy.dir/build'. >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 75%] Built target obenergy >make -f tools/CMakeFiles/obfit.dir/build.make tools/CMakeFiles/obfit.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/tools /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/tools /builddir/build/BUILD/openbabel-2.3.2/tools/CMakeFiles/obfit.dir/DependInfo.cmake --color= >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f tools/CMakeFiles/obfit.dir/build.make tools/CMakeFiles/obfit.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >make[2]: Nothing to be done for `tools/CMakeFiles/obfit.dir/build'. >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles 30 >[ 76%] Built target obfit >make -f tools/CMakeFiles/obgen.dir/build.make tools/CMakeFiles/obgen.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/tools /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/tools /builddir/build/BUILD/openbabel-2.3.2/tools/CMakeFiles/obgen.dir/DependInfo.cmake --color= >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f tools/CMakeFiles/obgen.dir/build.make tools/CMakeFiles/obgen.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >make[2]: Nothing to be done for `tools/CMakeFiles/obgen.dir/build'. >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 76%] Built target obgen >make -f tools/CMakeFiles/obgrep.dir/build.make tools/CMakeFiles/obgrep.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/tools /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/tools /builddir/build/BUILD/openbabel-2.3.2/tools/CMakeFiles/obgrep.dir/DependInfo.cmake --color= >make[2]: Leaving directory 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`/builddir/build/BUILD/openbabel-2.3.2' >make -f tools/CMakeFiles/obminimize.dir/build.make tools/CMakeFiles/obminimize.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >make[2]: Nothing to be done for `tools/CMakeFiles/obminimize.dir/build'. >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles 32 >[ 77%] Built target obminimize >make -f tools/CMakeFiles/obprobe.dir/build.make tools/CMakeFiles/obprobe.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/tools /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/tools /builddir/build/BUILD/openbabel-2.3.2/tools/CMakeFiles/obprobe.dir/DependInfo.cmake --color= >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f tools/CMakeFiles/obprobe.dir/build.make tools/CMakeFiles/obprobe.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >make[2]: Nothing to be done for `tools/CMakeFiles/obprobe.dir/build'. >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 77%] Built target obprobe >make -f tools/CMakeFiles/obprop.dir/build.make tools/CMakeFiles/obprop.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/tools /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/tools /builddir/build/BUILD/openbabel-2.3.2/tools/CMakeFiles/obprop.dir/DependInfo.cmake --color= >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f tools/CMakeFiles/obprop.dir/build.make tools/CMakeFiles/obprop.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >make[2]: Nothing to be done for `tools/CMakeFiles/obprop.dir/build'. >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 77%] Built target obprop >make -f tools/CMakeFiles/obrms.dir/build.make tools/CMakeFiles/obrms.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/tools /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/tools /builddir/build/BUILD/openbabel-2.3.2/tools/CMakeFiles/obrms.dir/DependInfo.cmake --color= >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f tools/CMakeFiles/obrms.dir/build.make tools/CMakeFiles/obrms.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >make[2]: Nothing to be done for `tools/CMakeFiles/obrms.dir/build'. >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles 33 >[ 78%] Built target obrms >make -f tools/CMakeFiles/obrotamer.dir/build.make tools/CMakeFiles/obrotamer.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/tools /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/tools /builddir/build/BUILD/openbabel-2.3.2/tools/CMakeFiles/obrotamer.dir/DependInfo.cmake --color= >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f tools/CMakeFiles/obrotamer.dir/build.make tools/CMakeFiles/obrotamer.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >make[2]: Nothing to be done for `tools/CMakeFiles/obrotamer.dir/build'. >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 78%] Built target obrotamer >make -f tools/CMakeFiles/obrotate.dir/build.make tools/CMakeFiles/obrotate.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/tools /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/tools /builddir/build/BUILD/openbabel-2.3.2/tools/CMakeFiles/obrotate.dir/DependInfo.cmake --color= >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f tools/CMakeFiles/obrotate.dir/build.make tools/CMakeFiles/obrotate.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >make[2]: Nothing to be done for `tools/CMakeFiles/obrotate.dir/build'. >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 78%] Built target obrotate >make -f tools/CMakeFiles/obspectrophore.dir/build.make tools/CMakeFiles/obspectrophore.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/tools /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/tools /builddir/build/BUILD/openbabel-2.3.2/tools/CMakeFiles/obspectrophore.dir/DependInfo.cmake --color= >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f tools/CMakeFiles/obspectrophore.dir/build.make tools/CMakeFiles/obspectrophore.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >make[2]: Nothing to be done for `tools/CMakeFiles/obspectrophore.dir/build'. >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles 34 >[ 79%] Built target obspectrophore >make -f src/GUI/CMakeFiles/obgui.dir/build.make src/GUI/CMakeFiles/obgui.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/GUI /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/src/GUI /builddir/build/BUILD/openbabel-2.3.2/src/GUI/CMakeFiles/obgui.dir/DependInfo.cmake --color= >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f src/GUI/CMakeFiles/obgui.dir/build.make src/GUI/CMakeFiles/obgui.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >make[2]: Nothing to be done for `src/GUI/CMakeFiles/obgui.dir/build'. >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles 31 >[ 80%] Built target obgui >make -f test/CMakeFiles/roundtrip.dir/build.make test/CMakeFiles/roundtrip.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/test /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/test /builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/roundtrip.dir/DependInfo.cmake --color= >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f test/CMakeFiles/roundtrip.dir/build.make test/CMakeFiles/roundtrip.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >make[2]: Nothing to be done for `test/CMakeFiles/roundtrip.dir/build'. >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles 75 >[ 81%] Built target roundtrip >make -f test/CMakeFiles/test_aromatest.dir/build.make test/CMakeFiles/test_aromatest.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/test /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/test /builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_aromatest.dir/DependInfo.cmake --color= >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f test/CMakeFiles/test_aromatest.dir/build.make test/CMakeFiles/test_aromatest.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >make[2]: Nothing to be done for `test/CMakeFiles/test_aromatest.dir/build'. >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles 77 >[ 82%] Built target test_aromatest >make -f test/CMakeFiles/test_atom.dir/build.make test/CMakeFiles/test_atom.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/test /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/test /builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_atom.dir/DependInfo.cmake --color= >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f test/CMakeFiles/test_atom.dir/build.make test/CMakeFiles/test_atom.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >make[2]: Nothing to be done for `test/CMakeFiles/test_atom.dir/build'. >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 82%] Built target test_atom >make -f test/CMakeFiles/test_automorphism.dir/build.make test/CMakeFiles/test_automorphism.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/test /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/test /builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_automorphism.dir/DependInfo.cmake --color= >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f test/CMakeFiles/test_automorphism.dir/build.make test/CMakeFiles/test_automorphism.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >make[2]: Nothing to be done for `test/CMakeFiles/test_automorphism.dir/build'. >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 82%] Built target test_automorphism >make -f test/CMakeFiles/test_bond.dir/build.make test/CMakeFiles/test_bond.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/test /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/test /builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_bond.dir/DependInfo.cmake --color= >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f test/CMakeFiles/test_bond.dir/build.make test/CMakeFiles/test_bond.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >make[2]: Nothing to be done for `test/CMakeFiles/test_bond.dir/build'. >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles 78 >[ 83%] Built target test_bond >make -f test/CMakeFiles/test_builder.dir/build.make test/CMakeFiles/test_builder.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/test /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/test /builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_builder.dir/DependInfo.cmake --color= >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f test/CMakeFiles/test_builder.dir/build.make test/CMakeFiles/test_builder.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >make[2]: Nothing to be done for `test/CMakeFiles/test_builder.dir/build'. >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 83%] Built target test_builder >make -f test/CMakeFiles/test_canonconsistent.dir/build.make test/CMakeFiles/test_canonconsistent.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/test /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/test /builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_canonconsistent.dir/DependInfo.cmake --color= >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f test/CMakeFiles/test_canonconsistent.dir/build.make test/CMakeFiles/test_canonconsistent.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >make[2]: Nothing to be done for `test/CMakeFiles/test_canonconsistent.dir/build'. >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 83%] Built target test_canonconsistent >make -f test/CMakeFiles/test_canonstable.dir/build.make test/CMakeFiles/test_canonstable.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/test /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/test /builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_canonstable.dir/DependInfo.cmake --color= >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f test/CMakeFiles/test_canonstable.dir/build.make test/CMakeFiles/test_canonstable.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >make[2]: Nothing to be done for `test/CMakeFiles/test_canonstable.dir/build'. >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles 79 >[ 84%] Built target test_canonstable >make -f test/CMakeFiles/test_cansmi.dir/build.make test/CMakeFiles/test_cansmi.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/test /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/test /builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_cansmi.dir/DependInfo.cmake --color= >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f test/CMakeFiles/test_cansmi.dir/build.make test/CMakeFiles/test_cansmi.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >make[2]: Nothing to be done for `test/CMakeFiles/test_cansmi.dir/build'. >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 84%] Built target test_cansmi >make -f test/CMakeFiles/test_charge-gasteiger.dir/build.make test/CMakeFiles/test_charge-gasteiger.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/test /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/test /builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_charge-gasteiger.dir/DependInfo.cmake --color= >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f test/CMakeFiles/test_charge-gasteiger.dir/build.make test/CMakeFiles/test_charge-gasteiger.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >make[2]: Nothing to be done for `test/CMakeFiles/test_charge-gasteiger.dir/build'. >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles 80 >[ 85%] Built target test_charge-gasteiger >make -f test/CMakeFiles/test_charge-mmff94.dir/build.make test/CMakeFiles/test_charge-mmff94.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/test /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/test /builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_charge-mmff94.dir/DependInfo.cmake --color= >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f test/CMakeFiles/test_charge-mmff94.dir/build.make test/CMakeFiles/test_charge-mmff94.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >make[2]: Nothing to be done for `test/CMakeFiles/test_charge-mmff94.dir/build'. >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 85%] Built target test_charge-mmff94 >make -f test/CMakeFiles/test_cistrans.dir/build.make test/CMakeFiles/test_cistrans.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/test /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/test /builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_cistrans.dir/DependInfo.cmake --color= >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f test/CMakeFiles/test_cistrans.dir/build.make test/CMakeFiles/test_cistrans.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >make[2]: Nothing to be done for `test/CMakeFiles/test_cistrans.dir/build'. >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 85%] Built target test_cistrans >make -f test/CMakeFiles/test_conversion.dir/build.make test/CMakeFiles/test_conversion.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/test /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/test /builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_conversion.dir/DependInfo.cmake --color= >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f test/CMakeFiles/test_conversion.dir/build.make test/CMakeFiles/test_conversion.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >make[2]: Nothing to be done for `test/CMakeFiles/test_conversion.dir/build'. >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles 81 >[ 86%] Built target test_conversion >make -f test/CMakeFiles/test_datatest.dir/build.make test/CMakeFiles/test_datatest.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/test /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/test /builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_datatest.dir/DependInfo.cmake --color= >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f test/CMakeFiles/test_datatest.dir/build.make test/CMakeFiles/test_datatest.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >make[2]: Nothing to be done for `test/CMakeFiles/test_datatest.dir/build'. >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 86%] Built target test_datatest >make -f test/CMakeFiles/test_ffgaff.dir/build.make test/CMakeFiles/test_ffgaff.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/test /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/test /builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_ffgaff.dir/DependInfo.cmake --color= >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f test/CMakeFiles/test_ffgaff.dir/build.make test/CMakeFiles/test_ffgaff.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >make[2]: Nothing to be done for `test/CMakeFiles/test_ffgaff.dir/build'. >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 86%] Built target test_ffgaff >make -f test/CMakeFiles/test_ffghemical.dir/build.make test/CMakeFiles/test_ffghemical.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/test /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/test /builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_ffghemical.dir/DependInfo.cmake --color= >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f test/CMakeFiles/test_ffghemical.dir/build.make test/CMakeFiles/test_ffghemical.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >make[2]: Nothing to be done for `test/CMakeFiles/test_ffghemical.dir/build'. >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles 82 >[ 87%] Built target test_ffghemical >make -f test/CMakeFiles/test_ffmmff94.dir/build.make test/CMakeFiles/test_ffmmff94.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/test /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/test /builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_ffmmff94.dir/DependInfo.cmake --color= >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f test/CMakeFiles/test_ffmmff94.dir/build.make test/CMakeFiles/test_ffmmff94.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >make[2]: Nothing to be done for `test/CMakeFiles/test_ffmmff94.dir/build'. >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 87%] Built target test_ffmmff94 >make -f test/CMakeFiles/test_ffuff.dir/build.make test/CMakeFiles/test_ffuff.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/test /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/test /builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_ffuff.dir/DependInfo.cmake --color= >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f test/CMakeFiles/test_ffuff.dir/build.make test/CMakeFiles/test_ffuff.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >make[2]: Nothing to be done for `test/CMakeFiles/test_ffuff.dir/build'. >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 87%] Built target test_ffuff >make -f test/CMakeFiles/test_formalcharge.dir/build.make test/CMakeFiles/test_formalcharge.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/test /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/test /builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_formalcharge.dir/DependInfo.cmake --color= >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f test/CMakeFiles/test_formalcharge.dir/build.make test/CMakeFiles/test_formalcharge.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >make[2]: Nothing to be done for `test/CMakeFiles/test_formalcharge.dir/build'. >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles 83 >[ 88%] Built target test_formalcharge >make -f test/CMakeFiles/test_format.dir/build.make test/CMakeFiles/test_format.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/test /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/test /builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_format.dir/DependInfo.cmake --color= >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f test/CMakeFiles/test_format.dir/build.make test/CMakeFiles/test_format.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >make[2]: Nothing to be done for `test/CMakeFiles/test_format.dir/build'. >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 88%] Built target test_format >make -f test/CMakeFiles/test_formula.dir/build.make test/CMakeFiles/test_formula.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/test /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/test /builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_formula.dir/DependInfo.cmake --color= >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f test/CMakeFiles/test_formula.dir/build.make test/CMakeFiles/test_formula.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >make[2]: Nothing to be done for `test/CMakeFiles/test_formula.dir/build'. >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 88%] Built target test_formula >make -f test/CMakeFiles/test_graphsym.dir/build.make test/CMakeFiles/test_graphsym.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/test /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/test /builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_graphsym.dir/DependInfo.cmake --color= >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f test/CMakeFiles/test_graphsym.dir/build.make test/CMakeFiles/test_graphsym.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >make[2]: Nothing to be done for `test/CMakeFiles/test_graphsym.dir/build'. >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles 84 >[ 89%] Built target test_graphsym >make -f test/CMakeFiles/test_implicitH.dir/build.make test/CMakeFiles/test_implicitH.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/test /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/test /builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_implicitH.dir/DependInfo.cmake --color= >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f test/CMakeFiles/test_implicitH.dir/build.make test/CMakeFiles/test_implicitH.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >make[2]: Nothing to be done for `test/CMakeFiles/test_implicitH.dir/build'. >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 89%] Built target test_implicitH >make -f test/CMakeFiles/test_inchiwrite.dir/build.make test/CMakeFiles/test_inchiwrite.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/test /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/test /builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_inchiwrite.dir/DependInfo.cmake --color= >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f test/CMakeFiles/test_inchiwrite.dir/build.make test/CMakeFiles/test_inchiwrite.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >make[2]: Nothing to be done for `test/CMakeFiles/test_inchiwrite.dir/build'. >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles 85 >[ 90%] Built target test_inchiwrite >make -f test/CMakeFiles/test_internalcoord.dir/build.make test/CMakeFiles/test_internalcoord.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/test /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/test /builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_internalcoord.dir/DependInfo.cmake --color= >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f test/CMakeFiles/test_internalcoord.dir/build.make test/CMakeFiles/test_internalcoord.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >make[2]: Nothing to be done for `test/CMakeFiles/test_internalcoord.dir/build'. >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 90%] Built target test_internalcoord >make -f test/CMakeFiles/test_invalidsmarts.dir/build.make test/CMakeFiles/test_invalidsmarts.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/test /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/test /builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_invalidsmarts.dir/DependInfo.cmake --color= >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f test/CMakeFiles/test_invalidsmarts.dir/build.make test/CMakeFiles/test_invalidsmarts.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >make[2]: Nothing to be done for `test/CMakeFiles/test_invalidsmarts.dir/build'. >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 90%] Built target test_invalidsmarts >make -f test/CMakeFiles/test_invalidsmiles.dir/build.make test/CMakeFiles/test_invalidsmiles.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/test /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/test /builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_invalidsmiles.dir/DependInfo.cmake --color= >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f test/CMakeFiles/test_invalidsmiles.dir/build.make test/CMakeFiles/test_invalidsmiles.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >make[2]: Nothing to be done for `test/CMakeFiles/test_invalidsmiles.dir/build'. >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles 86 >[ 91%] Built target test_invalidsmiles >make -f test/CMakeFiles/test_isomorphism.dir/build.make test/CMakeFiles/test_isomorphism.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/test /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/test /builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_isomorphism.dir/DependInfo.cmake --color= >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f test/CMakeFiles/test_isomorphism.dir/build.make test/CMakeFiles/test_isomorphism.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >make[2]: Nothing to be done for `test/CMakeFiles/test_isomorphism.dir/build'. >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 91%] Built target test_isomorphism >make -f test/CMakeFiles/test_iterators.dir/build.make test/CMakeFiles/test_iterators.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/test /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/test /builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_iterators.dir/DependInfo.cmake --color= >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f test/CMakeFiles/test_iterators.dir/build.make test/CMakeFiles/test_iterators.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >make[2]: Nothing to be done for `test/CMakeFiles/test_iterators.dir/build'. >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 91%] Built target test_iterators >make -f test/CMakeFiles/test_logp_psa.dir/build.make test/CMakeFiles/test_logp_psa.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/test /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/test /builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_logp_psa.dir/DependInfo.cmake --color= >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f test/CMakeFiles/test_logp_psa.dir/build.make test/CMakeFiles/test_logp_psa.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >make[2]: Nothing to be done for `test/CMakeFiles/test_logp_psa.dir/build'. >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles 87 >[ 92%] Built target test_logp_psa >make -f test/CMakeFiles/test_lssr.dir/build.make test/CMakeFiles/test_lssr.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/test /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/test /builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_lssr.dir/DependInfo.cmake --color= >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f test/CMakeFiles/test_lssr.dir/build.make test/CMakeFiles/test_lssr.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >make[2]: Nothing to be done for `test/CMakeFiles/test_lssr.dir/build'. >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 92%] Built target test_lssr >make -f test/CMakeFiles/test_math.dir/build.make test/CMakeFiles/test_math.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/test /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/test /builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_math.dir/DependInfo.cmake --color= >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f test/CMakeFiles/test_math.dir/build.make test/CMakeFiles/test_math.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >make[2]: Nothing to be done for `test/CMakeFiles/test_math.dir/build'. >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 92%] Built target test_math >make -f test/CMakeFiles/test_mol.dir/build.make test/CMakeFiles/test_mol.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/test /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/test /builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_mol.dir/DependInfo.cmake --color= >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f test/CMakeFiles/test_mol.dir/build.make test/CMakeFiles/test_mol.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >make[2]: Nothing to be done for `test/CMakeFiles/test_mol.dir/build'. >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles 88 >[ 93%] Built target test_mol >make -f test/CMakeFiles/test_phmodel.dir/build.make test/CMakeFiles/test_phmodel.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/test /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/test /builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_phmodel.dir/DependInfo.cmake --color= >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f test/CMakeFiles/test_phmodel.dir/build.make test/CMakeFiles/test_phmodel.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >make[2]: Nothing to be done for `test/CMakeFiles/test_phmodel.dir/build'. >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 93%] Built target test_phmodel >make -f test/CMakeFiles/test_residue.dir/build.make test/CMakeFiles/test_residue.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/test /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/test /builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_residue.dir/DependInfo.cmake --color= >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f test/CMakeFiles/test_residue.dir/build.make test/CMakeFiles/test_residue.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >make[2]: Nothing to be done for `test/CMakeFiles/test_residue.dir/build'. >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 93%] Built target test_residue >make -f test/CMakeFiles/test_ringtest.dir/build.make test/CMakeFiles/test_ringtest.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/test /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/test /builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_ringtest.dir/DependInfo.cmake --color= >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f test/CMakeFiles/test_ringtest.dir/build.make test/CMakeFiles/test_ringtest.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >make[2]: Nothing to be done for `test/CMakeFiles/test_ringtest.dir/build'. >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles 89 >[ 94%] Built target test_ringtest >make -f test/CMakeFiles/test_rotor.dir/build.make test/CMakeFiles/test_rotor.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/test /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/test /builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_rotor.dir/DependInfo.cmake --color= >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f test/CMakeFiles/test_rotor.dir/build.make test/CMakeFiles/test_rotor.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >make[2]: Nothing to be done for `test/CMakeFiles/test_rotor.dir/build'. >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 94%] Built target test_rotor >make -f test/CMakeFiles/test_shuffle.dir/build.make test/CMakeFiles/test_shuffle.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/test /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/test /builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_shuffle.dir/DependInfo.cmake --color= >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f test/CMakeFiles/test_shuffle.dir/build.make test/CMakeFiles/test_shuffle.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >make[2]: Nothing to be done for `test/CMakeFiles/test_shuffle.dir/build'. >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles 90 >[ 95%] Built target test_shuffle >make -f test/CMakeFiles/test_smartsparse.dir/build.make test/CMakeFiles/test_smartsparse.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/test /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/test /builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_smartsparse.dir/DependInfo.cmake --color= >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f test/CMakeFiles/test_smartsparse.dir/build.make test/CMakeFiles/test_smartsparse.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >make[2]: Nothing to be done for `test/CMakeFiles/test_smartsparse.dir/build'. >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 95%] Built target test_smartsparse >make -f test/CMakeFiles/test_smartstest.dir/build.make test/CMakeFiles/test_smartstest.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/test /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/test /builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_smartstest.dir/DependInfo.cmake --color= >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f test/CMakeFiles/test_smartstest.dir/build.make test/CMakeFiles/test_smartstest.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >make[2]: Nothing to be done for `test/CMakeFiles/test_smartstest.dir/build'. >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 95%] Built target test_smartstest >make -f test/CMakeFiles/test_smiles.dir/build.make test/CMakeFiles/test_smiles.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/test /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/test /builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_smiles.dir/DependInfo.cmake --color= >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f test/CMakeFiles/test_smiles.dir/build.make test/CMakeFiles/test_smiles.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >make[2]: Nothing to be done for `test/CMakeFiles/test_smiles.dir/build'. >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles 91 >[ 96%] Built target test_smiles >make -f test/CMakeFiles/test_smilesmatch.dir/build.make test/CMakeFiles/test_smilesmatch.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/test /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/test /builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_smilesmatch.dir/DependInfo.cmake --color= >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f test/CMakeFiles/test_smilesmatch.dir/build.make test/CMakeFiles/test_smilesmatch.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >make[2]: Nothing to be done for `test/CMakeFiles/test_smilesmatch.dir/build'. >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 96%] Built target test_smilesmatch >make -f test/CMakeFiles/test_spectrophore.dir/build.make test/CMakeFiles/test_spectrophore.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/test /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/test /builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_spectrophore.dir/DependInfo.cmake --color= >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f test/CMakeFiles/test_spectrophore.dir/build.make test/CMakeFiles/test_spectrophore.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >make[2]: Nothing to be done for `test/CMakeFiles/test_spectrophore.dir/build'. >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 96%] Built target test_spectrophore >make -f test/CMakeFiles/test_squareplanar.dir/build.make test/CMakeFiles/test_squareplanar.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/test /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/test /builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_squareplanar.dir/DependInfo.cmake --color= >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f test/CMakeFiles/test_squareplanar.dir/build.make test/CMakeFiles/test_squareplanar.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >make[2]: Nothing to be done for `test/CMakeFiles/test_squareplanar.dir/build'. >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles 92 >[ 97%] Built target test_squareplanar >make -f test/CMakeFiles/test_stereo.dir/build.make test/CMakeFiles/test_stereo.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/test /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/test /builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_stereo.dir/DependInfo.cmake --color= >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f test/CMakeFiles/test_stereo.dir/build.make test/CMakeFiles/test_stereo.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >make[2]: Nothing to be done for `test/CMakeFiles/test_stereo.dir/build'. >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 97%] Built target test_stereo >make -f test/CMakeFiles/test_stereoperception.dir/build.make test/CMakeFiles/test_stereoperception.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/test /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/test /builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_stereoperception.dir/DependInfo.cmake --color= >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f test/CMakeFiles/test_stereoperception.dir/build.make test/CMakeFiles/test_stereoperception.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >make[2]: Nothing to be done for `test/CMakeFiles/test_stereoperception.dir/build'. >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 97%] Built target test_stereoperception >make -f test/CMakeFiles/test_tetrahedral.dir/build.make test/CMakeFiles/test_tetrahedral.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/test /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/test /builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_tetrahedral.dir/DependInfo.cmake --color= >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f test/CMakeFiles/test_tetrahedral.dir/build.make test/CMakeFiles/test_tetrahedral.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >make[2]: Nothing to be done for `test/CMakeFiles/test_tetrahedral.dir/build'. >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles 93 >[ 98%] Built target test_tetrahedral >make -f test/CMakeFiles/test_tetranonplanar.dir/build.make test/CMakeFiles/test_tetranonplanar.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/test /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/test /builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_tetranonplanar.dir/DependInfo.cmake --color= >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f test/CMakeFiles/test_tetranonplanar.dir/build.make test/CMakeFiles/test_tetranonplanar.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >make[2]: Nothing to be done for `test/CMakeFiles/test_tetranonplanar.dir/build'. >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 98%] Built target test_tetranonplanar >make -f test/CMakeFiles/test_tetraplanar.dir/build.make test/CMakeFiles/test_tetraplanar.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/test /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/test /builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_tetraplanar.dir/DependInfo.cmake --color= >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f test/CMakeFiles/test_tetraplanar.dir/build.make test/CMakeFiles/test_tetraplanar.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >make[2]: Nothing to be done for `test/CMakeFiles/test_tetraplanar.dir/build'. >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 98%] Built target test_tetraplanar >make -f test/CMakeFiles/test_uniqueid.dir/build.make test/CMakeFiles/test_uniqueid.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/test /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/test /builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_uniqueid.dir/DependInfo.cmake --color= >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f test/CMakeFiles/test_uniqueid.dir/build.make test/CMakeFiles/test_uniqueid.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >make[2]: Nothing to be done for `test/CMakeFiles/test_uniqueid.dir/build'. >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles 94 >[ 99%] Built target test_uniqueid >make -f test/CMakeFiles/test_unitcell.dir/build.make test/CMakeFiles/test_unitcell.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/test /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/test /builddir/build/BUILD/openbabel-2.3.2/test/CMakeFiles/test_unitcell.dir/DependInfo.cmake --color= >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f test/CMakeFiles/test_unitcell.dir/build.make test/CMakeFiles/test_unitcell.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >make[2]: Nothing to be done for `test/CMakeFiles/test_unitcell.dir/build'. >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 99%] Built target test_unitcell >make -f scripts/CMakeFiles/pre_bindings_perl.dir/build.make scripts/CMakeFiles/pre_bindings_perl.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/scripts /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/scripts /builddir/build/BUILD/openbabel-2.3.2/scripts/CMakeFiles/pre_bindings_perl.dir/DependInfo.cmake --color= >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f scripts/CMakeFiles/pre_bindings_perl.dir/build.make scripts/CMakeFiles/pre_bindings_perl.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2/scripts && /usr/bin/cmake -E make_directory /builddir/build/BUILD/openbabel-2.3.2/scripts/perl >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[ 99%] Built target pre_bindings_perl >make -f scripts/CMakeFiles/bindings_perl.dir/build.make scripts/CMakeFiles/bindings_perl.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/scripts /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/scripts /builddir/build/BUILD/openbabel-2.3.2/scripts/CMakeFiles/bindings_perl.dir/DependInfo.cmake --color= >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f scripts/CMakeFiles/bindings_perl.dir/build.make scripts/CMakeFiles/bindings_perl.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2/scripts/perl && /usr/bin/cmake -E copy /builddir/build/BUILD/openbabel-2.3.2/scripts/perl/Makefile.PL /builddir/build/BUILD/openbabel-2.3.2/scripts/perl >cd /builddir/build/BUILD/openbabel-2.3.2/scripts/perl && /usr/bin/cmake -E copy /builddir/build/BUILD/openbabel-2.3.2/scripts/perl/OpenBabel.pm /builddir/build/BUILD/openbabel-2.3.2/scripts/perl >cd /builddir/build/BUILD/openbabel-2.3.2/scripts/perl && /usr/bin/cmake -E copy /builddir/build/BUILD/openbabel-2.3.2/scripts/perl/openbabel-perl.cpp /builddir/build/BUILD/openbabel-2.3.2/scripts/perl >cd /builddir/build/BUILD/openbabel-2.3.2/scripts/perl && PERL5LIB=/builddir/build/BUILD/openbabel-2.3.2/scripts/perl/inc SRC_DIR=/builddir/build/BUILD/openbabel-2.3.2 OBJ_DIR=/builddir/build/BUILD/openbabel-2.3.2 /usr/bin/perl /builddir/build/BUILD/openbabel-2.3.2/scripts/perl/Makefile.PL >Generating a Unix-style Makefile >Writing Makefile for Chemistry::OpenBabel >cd /builddir/build/BUILD/openbabel-2.3.2/scripts/perl && PERL5LIB=/builddir/build/BUILD/openbabel-2.3.2/scripts/perl/inc make >make[3]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2/scripts/perl' >Skip blib/lib/Chemistry/OpenBabel.pm (unchanged) >Running Mkbootstrap for Chemistry::OpenBabel () >chmod 644 OpenBabel.bs >g++ -c -I../../include -I/builddir/build/BUILD/openbabel-2.3.2/include -D_REENTRANT -D_GNU_SOURCE -fwrapv -fno-strict-aliasing -pipe -fstack-protector -I/usr/local/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -DVERSION=\"1.5.0\" -DXS_VERSION=\"1.5.0\" -fPIC "-I/usr/lib/perl5/CORE" openbabel-perl.cpp >openbabel-perl.cpp: In function 'int SWIG_AsVal_unsigned_SS_long(SV*, long unsigned int*)': >openbabel-perl.cpp:1903:21: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] > if (v >= 0 && v <= ULONG_MAX) { > ^ >openbabel-perl.cpp: In function 'void SWIG_InitializeModule(void*)': >openbabel-perl.cpp:43635:21: warning: statement has no effect [-Wunused-value] > (void *)clientdata; > ^ >In file included from openbabel-perl.cpp:756:0: >openbabel-perl.cpp: In function 'void boot_Chemistry__OpenBabel(PerlInterpreter*, CV*)': >/usr/lib/perl5/CORE/XSUB.h:164:20: warning: unused variable 'items' [-Wunused-variable] > #define dITEMS I32 items = (I32)(SP - MARK) > ^ >/usr/lib/perl5/CORE/XSUB.h:172:16: note: in expansion of macro 'dITEMS' > dSP; dAXMARK; dITEMS > ^ >openbabel-perl.cpp:43820:3: note: in expansion of macro 'dXSARGS' > dXSARGS; > ^ >rm -f blib/arch/auto/Chemistry/OpenBabel/OpenBabel.so >g++ -shared -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -Wl,-z,relro -L/usr/local/lib openbabel-perl.o -L/builddir/build/BUILD/openbabel-2.3.2/lib -lopenbabel -o blib/arch/auto/Chemistry/OpenBabel/OpenBabel.so \ > -lperl \ > >chmod 755 blib/arch/auto/Chemistry/OpenBabel/OpenBabel.so >/usr/bin/perl -MExtUtils::Command::MM -e 'cp_nonempty' -- OpenBabel.bs blib/arch/auto/Chemistry/OpenBabel/OpenBabel.bs 644 >make[3]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2/scripts/perl' >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' 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/builddir/build/BUILD/openbabel-2.3.2/scripts && /usr/bin/cmake -E make_directory /builddir/build/BUILD/openbabel-2.3.2/scripts/ruby >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[100%] Built target pre_bindings_ruby >make -f scripts/CMakeFiles/bindings_ruby.dir/build.make scripts/CMakeFiles/bindings_ruby.dir/depend >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/scripts /builddir/build/BUILD/openbabel-2.3.2 /builddir/build/BUILD/openbabel-2.3.2/scripts /builddir/build/BUILD/openbabel-2.3.2/scripts/CMakeFiles/bindings_ruby.dir/DependInfo.cmake --color= >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >make -f scripts/CMakeFiles/bindings_ruby.dir/build.make scripts/CMakeFiles/bindings_ruby.dir/build >make[2]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2' >cd /builddir/build/BUILD/openbabel-2.3.2/scripts/ruby && /usr/bin/ruby /builddir/build/BUILD/openbabel-2.3.2/scripts/ruby/extconf.rb --with-openbabel-lib=/builddir/build/BUILD/openbabel-2.3.2/lib --with-openbabel-include=/builddir/build/BUILD/openbabel-2.3.2/include >/builddir/build/BUILD/openbabel-2.3.2/scripts/ruby/extconf.rb:7:in `<main>': Use RbConfig instead of obsolete and deprecated Config. >/builddir/build/BUILD/openbabel-2.3.2/scripts/ruby/extconf.rb:7:in `<main>': Use RbConfig instead of obsolete and deprecated Config. >checking for inchi_api.h in /usr/include/inchi,/usr/include,/builddir/build/BUILD/openbabel-2.3.2/scripts/ruby/../../include... yes >checking for main() in -lopenbabel... yes >creating Makefile >cd /builddir/build/BUILD/openbabel-2.3.2/scripts/ruby && sed -i -e "\@^RUBYARCHDIR@s|sitearchdir|vendorarchdir|" /builddir/build/BUILD/openbabel-2.3.2/scripts/ruby/Makefile >cd /builddir/build/BUILD/openbabel-2.3.2/scripts/ruby && /usr/bin/cmake -E echo Compiling\ Ruby\ bindings >Compiling Ruby bindings >cd /builddir/build/BUILD/openbabel-2.3.2/scripts/ruby && make >make[3]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2/scripts/ruby' >rm -f openbabel.so >g++ -shared -o openbabel.so openbabel-ruby.o -L. -L/builddir/build/BUILDROOT/openbabel-2.3.2-4.fc21.arm/usr/lib -L/builddir/build/BUILD/openbabel-2.3.2/lib -L. -Wl,-z,relro -fstack-protector -rdynamic -Wl,-export-dynamic -dynamic -lruby -lopenbabel -lpthread -ldl -lcrypt -lm -lc >make[3]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2/scripts/ruby' >make[2]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E cmake_progress_report /builddir/build/BUILD/openbabel-2.3.2/CMakeFiles >[100%] Built target bindings_ruby >make[1]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2' >/usr/bin/cmake -E 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Installing: /builddir/build/BUILDROOT/openbabel-2.3.2-4.fc21.arm/usr/lib/openbabel/cmlreactformat.so >-- Installing: /builddir/build/BUILDROOT/openbabel-2.3.2-4.fc21.arm/usr/bin/babel >-- Installing: /builddir/build/BUILDROOT/openbabel-2.3.2-4.fc21.arm/usr/bin/obabel >-- Installing: /builddir/build/BUILDROOT/openbabel-2.3.2-4.fc21.arm/usr/bin/obchiral >-- Installing: /builddir/build/BUILDROOT/openbabel-2.3.2-4.fc21.arm/usr/bin/obconformer >-- Installing: /builddir/build/BUILDROOT/openbabel-2.3.2-4.fc21.arm/usr/bin/obenergy >-- Installing: /builddir/build/BUILDROOT/openbabel-2.3.2-4.fc21.arm/usr/bin/obfit >-- Installing: /builddir/build/BUILDROOT/openbabel-2.3.2-4.fc21.arm/usr/bin/obgen >-- Installing: /builddir/build/BUILDROOT/openbabel-2.3.2-4.fc21.arm/usr/bin/obminimize >-- Installing: /builddir/build/BUILDROOT/openbabel-2.3.2-4.fc21.arm/usr/bin/obprobe >-- Installing: /builddir/build/BUILDROOT/openbabel-2.3.2-4.fc21.arm/usr/bin/obprop >-- Installing: /builddir/build/BUILDROOT/openbabel-2.3.2-4.fc21.arm/usr/bin/obrotamer >-- Installing: /builddir/build/BUILDROOT/openbabel-2.3.2-4.fc21.arm/usr/bin/obrotate >-- Installing: /builddir/build/BUILDROOT/openbabel-2.3.2-4.fc21.arm/usr/bin/obrms >-- Installing: /builddir/build/BUILDROOT/openbabel-2.3.2-4.fc21.arm/usr/bin/obspectrophore >-- Installing: /builddir/build/BUILDROOT/openbabel-2.3.2-4.fc21.arm/usr/bin/obgrep >-- Installing: /builddir/build/BUILDROOT/openbabel-2.3.2-4.fc21.arm/usr/bin/obgui >-- Installing: /builddir/build/BUILDROOT/openbabel-2.3.2-4.fc21.arm/usr/bin/roundtrip >-- Installing: /builddir/build/BUILDROOT/openbabel-2.3.2-4.fc21.arm/usr/lib/_openbabel.so >-- Installing: /builddir/build/BUILDROOT/openbabel-2.3.2-4.fc21.arm/usr/lib/openbabel.py >-- Installing: /builddir/build/BUILDROOT/openbabel-2.3.2-4.fc21.arm/usr/lib/pybel.py >make[1]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2/scripts/perl' >Running Mkbootstrap for Chemistry::OpenBabel () >chmod 644 OpenBabel.bs >Files found in blib/arch: installing files in blib/lib into architecture dependent library tree >Installing /builddir/build/BUILDROOT/openbabel-2.3.2-4.fc21.arm/usr/lib/perl5/vendor_perl/auto/Chemistry/OpenBabel/OpenBabel.so >Installing /builddir/build/BUILDROOT/openbabel-2.3.2-4.fc21.arm/usr/lib/perl5/vendor_perl/Chemistry/OpenBabel.pm >Appending installation info to /builddir/build/BUILDROOT/openbabel-2.3.2-4.fc21.arm/usr/lib/perl5/perllocal.pod >make[1]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2/scripts/perl' >make[1]: Entering directory `/builddir/build/BUILD/openbabel-2.3.2/scripts/ruby' >/usr/bin/mkdir -p . /builddir/build/BUILDROOT/openbabel-2.3.2-4.fc21.arm/usr/lib/ruby/vendor_ruby >exit > .RUBYARCHDIR.time >/usr/bin/install -c -m 0755 openbabel.so /builddir/build/BUILDROOT/openbabel-2.3.2-4.fc21.arm/usr/lib/ruby/vendor_ruby >make[1]: Leaving directory `/builddir/build/BUILD/openbabel-2.3.2/scripts/ruby' >+ mkdir -p /builddir/build/BUILDROOT/openbabel-2.3.2-4.fc21.arm/usr/lib/python2.7/site-packages >+ mv /builddir/build/BUILDROOT/openbabel-2.3.2-4.fc21.arm/usr/lib/_openbabel.so /builddir/build/BUILDROOT/openbabel-2.3.2-4.fc21.arm/usr/lib/openbabel.py /builddir/build/BUILDROOT/openbabel-2.3.2-4.fc21.arm/usr/lib/pybel.py /builddir/build/BUILDROOT/openbabel-2.3.2-4.fc21.arm/usr/lib/python2.7/site-packages >+ rm /builddir/build/BUILDROOT/openbabel-2.3.2-4.fc21.arm/usr/lib/cmake/openbabel2/OpenBabel2Config.cmake /builddir/build/BUILDROOT/openbabel-2.3.2-4.fc21.arm/usr/lib/cmake/openbabel2/OpenBabel2ConfigVersion.cmake /builddir/build/BUILDROOT/openbabel-2.3.2-4.fc21.arm/usr/lib/cmake/openbabel2/OpenBabel2_EXPORTS-relwithdebinfo.cmake /builddir/build/BUILDROOT/openbabel-2.3.2-4.fc21.arm/usr/lib/cmake/openbabel2/OpenBabel2_EXPORTS.cmake >+ rm /builddir/build/BUILDROOT/openbabel-2.3.2-4.fc21.arm/usr/lib/perl5/perllocal.pod >+ rm -f /builddir/build/BUILDROOT/openbabel-2.3.2-4.fc21.arm/usr/lib/perl5/vendor_perl/auto/Chemistry/OpenBabel/.packlist /builddir/build/BUILDROOT/openbabel-2.3.2-4.fc21.arm/usr/lib/perl5/vendor_perl/auto/Chemistry/OpenBabel/OpenBabel.bs >+ chmod 755 /builddir/build/BUILDROOT/openbabel-2.3.2-4.fc21.arm/usr/lib/perl5/vendor_perl/auto/Chemistry/OpenBabel/OpenBabel.so >+ desktop-file-install --dir=/builddir/build/BUILDROOT/openbabel-2.3.2-4.fc21.arm/usr/share/applications /builddir/build/SOURCES/obgui.desktop >+ install -Dpm644 babel.png /builddir/build/BUILDROOT/openbabel-2.3.2-4.fc21.arm/usr/share/pixmaps/babel.png >+ /usr/lib/rpm/find-debuginfo.sh --strict-build-id -m --run-dwz --dwz-low-mem-die-limit 10000000 --dwz-max-die-limit 50000000 /builddir/build/BUILD/openbabel-2.3.2 >extracting debug info from /builddir/build/BUILDROOT/openbabel-2.3.2-4.fc21.arm/usr/bin/obenergy >extracting debug info from /builddir/build/BUILDROOT/openbabel-2.3.2-4.fc21.arm/usr/bin/obgui >extracting debug info from /builddir/build/BUILDROOT/openbabel-2.3.2-4.fc21.arm/usr/bin/obrotamer >extracting debug info from /builddir/build/BUILDROOT/openbabel-2.3.2-4.fc21.arm/usr/bin/roundtrip >extracting debug info from /builddir/build/BUILDROOT/openbabel-2.3.2-4.fc21.arm/usr/bin/obrotate >extracting debug info from /builddir/build/BUILDROOT/openbabel-2.3.2-4.fc21.arm/usr/bin/obgrep >extracting debug info from /builddir/build/BUILDROOT/openbabel-2.3.2-4.fc21.arm/usr/bin/obminimize >extracting debug info from /builddir/build/BUILDROOT/openbabel-2.3.2-4.fc21.arm/usr/bin/obconformer >extracting debug info from /builddir/build/BUILDROOT/openbabel-2.3.2-4.fc21.arm/usr/bin/obrms >extracting debug info from /builddir/build/BUILDROOT/openbabel-2.3.2-4.fc21.arm/usr/bin/babel >extracting debug info from /builddir/build/BUILDROOT/openbabel-2.3.2-4.fc21.arm/usr/bin/obspectrophore >extracting debug info from /builddir/build/BUILDROOT/openbabel-2.3.2-4.fc21.arm/usr/bin/obgen >extracting debug info from /builddir/build/BUILDROOT/openbabel-2.3.2-4.fc21.arm/usr/bin/obchiral >extracting debug info from /builddir/build/BUILDROOT/openbabel-2.3.2-4.fc21.arm/usr/bin/obprop >extracting debug info from /builddir/build/BUILDROOT/openbabel-2.3.2-4.fc21.arm/usr/bin/obprobe >extracting debug info from /builddir/build/BUILDROOT/openbabel-2.3.2-4.fc21.arm/usr/bin/obabel >extracting debug info from /builddir/build/BUILDROOT/openbabel-2.3.2-4.fc21.arm/usr/bin/obfit >extracting debug info from /builddir/build/BUILDROOT/openbabel-2.3.2-4.fc21.arm/usr/lib/openbabel/xyzformat.so >extracting debug info from /builddir/build/BUILDROOT/openbabel-2.3.2-4.fc21.arm/usr/lib/openbabel/chemdrawcdx.so >extracting debug info from /builddir/build/BUILDROOT/openbabel-2.3.2-4.fc21.arm/usr/lib/openbabel/chem3dformat.so >extracting debug info from /builddir/build/BUILDROOT/openbabel-2.3.2-4.fc21.arm/usr/lib/openbabel/yasaraformat.so >extracting debug info from 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>extracting debug info from /builddir/build/BUILDROOT/openbabel-2.3.2-4.fc21.arm/usr/lib/openbabel/pdbformat.so >extracting debug info from /builddir/build/BUILDROOT/openbabel-2.3.2-4.fc21.arm/usr/lib/openbabel/fhformat.so >extracting debug info from /builddir/build/BUILDROOT/openbabel-2.3.2-4.fc21.arm/usr/lib/openbabel/zindoformat.so >extracting debug info from /builddir/build/BUILDROOT/openbabel-2.3.2-4.fc21.arm/usr/lib/openbabel/gaussformat.so >extracting debug info from /builddir/build/BUILDROOT/openbabel-2.3.2-4.fc21.arm/usr/lib/openbabel/mpqcformat.so >extracting debug info from /builddir/build/BUILDROOT/openbabel-2.3.2-4.fc21.arm/usr/lib/openbabel/pwscfformat.so >extracting debug info from /builddir/build/BUILDROOT/openbabel-2.3.2-4.fc21.arm/usr/lib/openbabel/balstformat.so >extracting debug info from /builddir/build/BUILDROOT/openbabel-2.3.2-4.fc21.arm/usr/lib/openbabel/carformat.so >extracting debug info from 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>extracting debug info from /builddir/build/BUILDROOT/openbabel-2.3.2-4.fc21.arm/usr/lib/openbabel/gulpformat.so >extracting debug info from /builddir/build/BUILDROOT/openbabel-2.3.2-4.fc21.arm/usr/lib/openbabel/rxnformat.so >extracting debug info from /builddir/build/BUILDROOT/openbabel-2.3.2-4.fc21.arm/usr/lib/openbabel/lmpdatformat.so >extracting debug info from /builddir/build/BUILDROOT/openbabel-2.3.2-4.fc21.arm/usr/lib/openbabel/chemtoolformat.so >extracting debug info from /builddir/build/BUILDROOT/openbabel-2.3.2-4.fc21.arm/usr/lib/openbabel/gamessukformat.so >extracting debug info from /builddir/build/BUILDROOT/openbabel-2.3.2-4.fc21.arm/usr/lib/openbabel/povrayformat.so >extracting debug info from /builddir/build/BUILDROOT/openbabel-2.3.2-4.fc21.arm/usr/lib/openbabel/xedformat.so >extracting debug info from /builddir/build/BUILDROOT/openbabel-2.3.2-4.fc21.arm/usr/lib/openbabel/posformat.so >extracting debug info from /builddir/build/BUILDROOT/openbabel-2.3.2-4.fc21.arm/usr/lib/openbabel/pdbqtformat.so >extracting debug info from /builddir/build/BUILDROOT/openbabel-2.3.2-4.fc21.arm/usr/lib/openbabel/molreport.so >extracting debug info from /builddir/build/BUILDROOT/openbabel-2.3.2-4.fc21.arm/usr/lib/openbabel/cifformat.so >extracting debug info from /builddir/build/BUILDROOT/openbabel-2.3.2-4.fc21.arm/usr/lib/openbabel/hinformat.so >extracting debug info from /builddir/build/BUILDROOT/openbabel-2.3.2-4.fc21.arm/usr/lib/openbabel/turbomoleformat.so >extracting debug info from /builddir/build/BUILDROOT/openbabel-2.3.2-4.fc21.arm/usr/lib/openbabel/mmodformat.so >extracting debug info from /builddir/build/BUILDROOT/openbabel-2.3.2-4.fc21.arm/usr/lib/openbabel/castepformat.so >extracting debug info from /builddir/build/BUILDROOT/openbabel-2.3.2-4.fc21.arm/usr/lib/openbabel/xmlformat.so >extracting debug info from /builddir/build/BUILDROOT/openbabel-2.3.2-4.fc21.arm/usr/lib/openbabel/reportformat.so >extracting debug info from /builddir/build/BUILDROOT/openbabel-2.3.2-4.fc21.arm/usr/lib/openbabel/bgfformat.so >extracting debug info from /builddir/build/BUILDROOT/openbabel-2.3.2-4.fc21.arm/usr/lib/openbabel/molproformat.so >extracting debug info from /builddir/build/BUILDROOT/openbabel-2.3.2-4.fc21.arm/usr/lib/openbabel/nwchemformat.so >extracting debug info from /builddir/build/BUILDROOT/openbabel-2.3.2-4.fc21.arm/usr/lib/openbabel/gausscubeformat.so >extracting debug info from /builddir/build/BUILDROOT/openbabel-2.3.2-4.fc21.arm/usr/lib/openbabel/textformat.so >extracting debug info from /builddir/build/BUILDROOT/openbabel-2.3.2-4.fc21.arm/usr/lib/openbabel/fingerprintformat.so >extracting debug info from /builddir/build/BUILDROOT/openbabel-2.3.2-4.fc21.arm/usr/lib/openbabel/boxformat.so >extracting debug info from /builddir/build/BUILDROOT/openbabel-2.3.2-4.fc21.arm/usr/lib/openbabel/gausszmatformat.so >extracting debug info from /builddir/build/BUILDROOT/openbabel-2.3.2-4.fc21.arm/usr/lib/openbabel/acrformat.so >extracting debug info from /builddir/build/BUILDROOT/openbabel-2.3.2-4.fc21.arm/usr/lib/openbabel/asciiformat.so >extracting debug info from /builddir/build/BUILDROOT/openbabel-2.3.2-4.fc21.arm/usr/lib/openbabel/mol2format.so >extracting debug info from /builddir/build/BUILDROOT/openbabel-2.3.2-4.fc21.arm/usr/lib/openbabel/fastsearchformat.so >extracting debug info from /builddir/build/BUILDROOT/openbabel-2.3.2-4.fc21.arm/usr/lib/openbabel/xsfformat.so >extracting debug info from /builddir/build/BUILDROOT/openbabel-2.3.2-4.fc21.arm/usr/lib/ruby/vendor_ruby/openbabel.so >extracting debug info from /builddir/build/BUILDROOT/openbabel-2.3.2-4.fc21.arm/usr/lib/libopenbabel.so.4.0.2 >extracting debug info from /builddir/build/BUILDROOT/openbabel-2.3.2-4.fc21.arm/usr/lib/perl5/vendor_perl/auto/Chemistry/OpenBabel/OpenBabel.so >extracting debug info from /builddir/build/BUILDROOT/openbabel-2.3.2-4.fc21.arm/usr/lib/python2.7/site-packages/_openbabel.so >/usr/lib/rpm/sepdebugcrcfix: Updated 131 CRC32s, 0 CRC32s did match. >symlinked /usr/lib/debug/usr/lib/libopenbabel.so.4.0.2.debug to /usr/lib/debug/usr/lib/libopenbabel.so.4.debug >symlinked /usr/lib/debug/usr/lib/libopenbabel.so.4.0.2.debug to /usr/lib/debug/usr/lib/libopenbabel.so.debug >40389 blocks >+ /usr/lib/rpm/check-buildroot >+ /usr/lib/rpm/brp-compress >+ /usr/lib/rpm/brp-strip-static-archive /usr/bin/strip >+ /usr/lib/rpm/brp-python-bytecompile /usr/bin/python 1 >Bytecompiling .py files below /builddir/build/BUILDROOT/openbabel-2.3.2-4.fc21.arm/usr/lib/python2.7 using /usr/bin/python2.7 >Bytecompiling .py files below /builddir/build/BUILDROOT/openbabel-2.3.2-4.fc21.arm/usr/lib/debug/usr/lib/python2.7 using /usr/bin/python2.7 >+ /usr/lib/rpm/brp-python-hardlink >+ /usr/lib/rpm/redhat/brp-java-repack-jars >Executing(%check): /bin/sh -e /var/tmp/rpm-tmp.513BGC >+ umask 022 >+ cd /builddir/build/BUILD >+ cd openbabel-2.3.2 >+ export CTEST_OUTPUT_ON_FAILURE=1 >+ CTEST_OUTPUT_ON_FAILURE=1 >+ make test >Running tests... >/usr/bin/ctest --force-new-ctest-process >Test project /builddir/build/BUILD/openbabel-2.3.2 > Start 1: automorphism_Test > 1/60 Test #1: automorphism_Test ................ Passed 0.22 sec > Start 2: builder_Test > 2/60 Test #2: builder_Test ..................... Passed 24.33 sec > Start 3: canonconsistent_Test > 3/60 Test #3: canonconsistent_Test ............. Passed 1.77 sec > Start 4: canonstable_Test > 4/60 Test #4: canonstable_Test ................. Passed 68.99 sec > Start 5: cistrans_Test > 5/60 Test #5: cistrans_Test .................... Passed 0.17 sec > Start 6: graphsym_Test > 6/60 Test #6: graphsym_Test .................... Passed 0.34 sec > Start 7: implicitH_Test > 7/60 Test #7: implicitH_Test ................... Passed 0.32 sec > Start 8: lssr_Test > 8/60 Test #8: lssr_Test ........................ Passed 29.91 sec > Start 9: isomorphism_Test > 9/60 Test #9: isomorphism_Test ................. Passed 0.23 sec > Start 10: rotor_Test >10/60 Test #10: rotor_Test ....................... Passed 0.21 sec > Start 11: shuffle_Test >11/60 Test #11: shuffle_Test ..................... Passed 8.33 sec > Start 12: smiles_Test >12/60 Test #12: smiles_Test ...................... Passed 0.27 sec > Start 13: spectrophore_Test >13/60 Test #13: spectrophore_Test ................ Passed 3.35 sec > Start 14: squareplanar_Test >14/60 Test #14: squareplanar_Test ................ Passed 0.01 sec > Start 15: stereo_Test >15/60 Test #15: stereo_Test ...................... Passed 1.12 sec > Start 16: stereoperception_Test >16/60 Test #16: stereoperception_Test ............ Passed 0.21 sec > Start 17: tetrahedral_Test >17/60 Test #17: tetrahedral_Test ................. Passed 0.01 sec > Start 18: tetranonplanar_Test >18/60 Test #18: tetranonplanar_Test .............. Passed 0.01 sec > Start 19: tetraplanar_Test >19/60 Test #19: tetraplanar_Test ................. Passed 0.01 sec > Start 20: uniqueid_Test >20/60 Test #20: uniqueid_Test .................... Passed 0.02 sec > Start 21: inchiSamples.sdf_Test >21/60 Test #21: inchiSamples.sdf_Test ............ Passed 0.58 sec > Start 22: inchiSamplesTechMan.sdf_Test >22/60 Test #22: inchiSamplesTechMan.sdf_Test ..... Passed 0.44 sec > Start 23: inchiSteffen_PubChem.smi_Test >23/60 Test #23: inchiSteffen_PubChem.smi_Test ....***Timeout 1500.02 sec >============================== >*** Open Babel Warning in InChI code > #8 :Salt was disconnected; >============================== >*** Open Babel Warning in InChI code > #30 :Salt was disconnected; > Start 24: aromatest_Test >24/60 Test #24: aromatest_Test ................... Passed 0.23 sec > Start 25: atom_Test >25/60 Test #25: atom_Test ........................ Passed 0.01 sec > Start 26: bond_Test >26/60 Test #26: bond_Test ........................ Passed 0.01 sec > Start 27: cansmi_Test >27/60 Test #27: cansmi_Test ...................... Passed 5.19 sec > Start 28: charge-mmff94_Test >28/60 Test #28: charge-mmff94_Test ............... Passed 0.91 sec > Start 29: charge-gasteiger_Test >29/60 Test #29: charge-gasteiger_Test ............ Passed 0.42 sec > Start 30: conversion_Test >30/60 Test #30: conversion_Test .................. Passed 0.18 sec > Start 31: datatest_Test >31/60 Test #31: datatest_Test .................... Passed 0.01 sec > Start 32: ffgaff_Test >32/60 Test #32: ffgaff_Test ...................... Passed 4.72 sec > Start 33: ffghemical_Test >33/60 Test #33: ffghemical_Test .................. Passed 7.85 sec > Start 34: ffmmff94_Test >34/60 Test #34: ffmmff94_Test .................... Passed 5.62 sec > Start 35: ffuff_Test >35/60 Test #35: ffuff_Test ....................... Passed 3.67 sec > Start 36: formalcharge_Test >36/60 Test #36: formalcharge_Test ................ Passed 0.73 sec > Start 37: format_Test >37/60 Test #37: format_Test ...................... Passed 0.17 sec > Start 38: formula_Test >38/60 Test #38: formula_Test ..................... Passed 1.23 sec > Start 39: internalcoord_Test >39/60 Test #39: internalcoord_Test ............... Passed 0.01 sec > Start 40: invalidsmarts_Test >40/60 Test #40: invalidsmarts_Test ............... Passed 0.01 sec > Start 41: invalidsmiles_Test >41/60 Test #41: invalidsmiles_Test ............... Passed 0.17 sec > Start 42: iterators_Test >42/60 Test #42: iterators_Test ................... Passed 0.73 sec > Start 43: logp_psa_Test >43/60 Test #43: logp_psa_Test .................... Passed 0.21 sec > Start 44: math_Test >44/60 Test #44: math_Test ........................ Passed 0.69 sec > Start 45: mol_Test >45/60 Test #45: mol_Test ......................... Passed 0.19 sec > Start 46: phmodel_Test >46/60 Test #46: phmodel_Test ..................... Passed 0.31 sec > Start 47: residue_Test >47/60 Test #47: residue_Test ..................... Passed 0.22 sec > Start 48: ringtest_Test >48/60 Test #48: ringtest_Test .................... Passed 0.75 sec > Start 49: smartstest_Test >49/60 Test #49: smartstest_Test .................. Passed 1.24 sec > Start 50: smartsparse_Test >50/60 Test #50: smartsparse_Test ................. Passed 0.02 sec > Start 51: smilesmatch_Test >51/60 Test #51: smilesmatch_Test ................. Passed 4.66 sec > Start 52: unitcell_Test >52/60 Test #52: unitcell_Test .................... Passed 0.01 sec > Start 53: pytest_babel >53/60 Test #53: pytest_babel ..................... Passed 0.45 sec > Start 54: pytest_sym >54/60 Test #54: pytest_sym .......................***Failed Error regular expression found in output. Regex=[FAIL]1270.06 sec >/builddir/build/BUILD/openbabel-2.3.2/scripts/python:/builddir/build/BUILD/openbabel-2.3.2/lib >......F.F...F...F....FF... >====================================================================== >FAIL: testSMILEStoInChI (__main__.TestConversions) >---------------------------------------------------------------------- >Traceback (most recent call last): > File "/builddir/build/BUILD/openbabel-2.3.2/test/testsym.py", line 166, in testSMILEStoInChI > self.assertEqual(output.rstrip(), can) >AssertionError: u'' != 'FC=CCl' >====================================================================== >FAIL: testInChItoSMI (__main__.TestCisTransSym) >Verify that the InChI is read correctly >---------------------------------------------------------------------- >Traceback (most recent call last): > File "/builddir/build/BUILD/openbabel-2.3.2/test/testsym.py", line 28, in testInChItoSMI > self.assertEqual(output.rstrip(), self.cansmi) >AssertionError: u'' != 'Cl/C=C/C=C\\Br' >====================================================================== >FAIL: testInChItoSMI (__main__.TestTetSym) >Verify that the InChI is read correctly >---------------------------------------------------------------------- >Traceback (most recent call last): > File "/builddir/build/BUILD/openbabel-2.3.2/test/testsym.py", line 28, in testInChItoSMI > self.assertEqual(output.rstrip(), self.cansmi) >AssertionError: u'' != 'C[C@](Br)(Cl)F' >====================================================================== >FAIL: testInChItoSMI (__main__.TestLonePairTetSym) >Verify that the InChI is read correctly >---------------------------------------------------------------------- >Traceback (most recent call last): > File "/builddir/build/BUILD/openbabel-2.3.2/test/testsym.py", line 28, in testInChItoSMI > self.assertEqual(output.rstrip(), self.cansmi) >AssertionError: u'' != 'C[S@](=O)Cl' >====================================================================== >FAIL: testInChIToSMILES_Bug (__main__.TestStereoConversion) >PR#2101034- InChI <-> SMILES conv misrepresents stereo >---------------------------------------------------------------------- >Traceback (most recent call last): > File "/builddir/build/BUILD/openbabel-2.3.2/test/testsym.py", line 336, in testInChIToSMILES_Bug > self.assertEqual(output.rstrip(), "C=C/C=C/c1ccccc1") >AssertionError: u'' != 'C=C/C=C/c1ccccc1' >====================================================================== >FAIL: testInChItoSMI (__main__.TestRingBondCisTransSym) >Verify that the InChI is read correctly >---------------------------------------------------------------------- >Traceback (most recent call last): > File "/builddir/build/BUILD/openbabel-2.3.2/test/testsym.py", line 28, in testInChItoSMI > self.assertEqual(output.rstrip(), self.cansmi) >AssertionError: u'' != 'I/C=C/1\\CN1' >---------------------------------------------------------------------- >Ran 26 tests in 1269.918s >FAILED (failures=6) > Start 55: pytest_fastsearch >55/60 Test #55: pytest_fastsearch ................ Passed 0.55 sec > Start 56: pytest_unique >56/60 Test #56: pytest_unique .................... Passed 2.13 sec > Start 57: pytest_kekule >57/60 Test #57: pytest_kekule .................... Passed 4.49 sec > Start 58: pybindtest_bindings >58/60 Test #58: pybindtest_bindings .............. Passed 0.92 sec > Start 59: pybindtest__pybel >59/60 Test #59: pybindtest__pybel ................ Passed 1.43 sec > Start 60: pybindtest_example >60/60 Test #60: pybindtest_example ............... Passed 0.44 sec >97% tests passed, 2 tests failed out of 60 >Total Test time (real) = 2961.67 sec >The following tests FAILED: > 23 - inchiSteffen_PubChem.smi_Test (Timeout) > 54 - pytest_sym (Failed) >Errors while running CTest >make: *** [test] Error 8 >error: Bad exit status from /var/tmp/rpm-tmp.513BGC (%check) >RPM build errors: > Bad exit status from /var/tmp/rpm-tmp.513BGC (%check) >Child return code was: 1 >EXCEPTION: Command failed. See logs for output. > # ['bash', '--login', '-c', 'rpmbuild -bb --target armv7hl --nodeps builddir/build/SPECS/openbabel.spec'] >Traceback (most recent call last): > File "/usr/lib/python2.7/site-packages/mockbuild/trace_decorator.py", line 70, in trace > result = func(*args, **kw) > File "/usr/lib/python2.7/site-packages/mockbuild/util.py", line 376, in do > raise mockbuild.exception.Error, ("Command failed. See logs for output.\n # %s" % (command,), child.returncode) >Error: Command failed. See logs for output. > # ['bash', '--login', '-c', 'rpmbuild -bb --target armv7hl --nodeps builddir/build/SPECS/openbabel.spec'] >LEAVE do --> EXCEPTION RAISED >
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bug 1094491
: 892673