Bug 1051987

Summary: [abrt] java-1.7.0-openjdk-devel: crash_handler(): java killed by SIGABRT
Product: [Fedora] Fedora Reporter: cnangel <cnangel>
Component: glib2Assignee: Matthias Clasen <mclasen>
Status: CLOSED EOL QA Contact: Fedora Extras Quality Assurance <extras-qa>
Severity: unspecified Docs Contact:
Priority: unspecified    
Version: 20CC: ahughes, dbhole, ebaron, jerboaa, jvanek, mclasen, omajid
Target Milestone: ---   
Target Release: ---   
Hardware: x86_64   
OS: Unspecified   
URL: https://retrace.fedoraproject.org/faf/reports/bthash/ae99008ec47ce07910d7b608d9bddb4a7b138df4
Whiteboard: abrt_hash:8cc04f00d5af07957748d5a58d065584fb6bc526
Fixed In Version: Doc Type: Bug Fix
Doc Text:
Story Points: ---
Clone Of: Environment:
Last Closed: 2015-06-30 00:50:50 UTC Type: ---
Regression: --- Mount Type: ---
Documentation: --- CRM:
Verified Versions: Category: ---
oVirt Team: --- RHEL 7.3 requirements from Atomic Host:
Cloudforms Team: --- Target Upstream Version:
Embargoed:
Attachments:
Description Flags
File: backtrace
none
File: cgroup
none
File: core_backtrace
none
File: dso_list
none
File: environ
none
File: hs_err.log
none
File: limits
none
File: maps
none
File: open_fds
none
File: proc_pid_status
none
File: var_log_messages
none
Backtrace of GLib call to pthread_key_create
none
Reproducer for GLib segfault none

Description cnangel 2014-01-13 03:44:47 UTC
Version-Release number of selected component:
java-1.7.0-openjdk-devel-1.7.0.60-2.4.3.0.fc20

Additional info:
reporter:       libreport-2.1.11
.gdb_history:   
backtrace_rating: 3
cmdline:        /usr/lib/jvm/java/bin/java -Xbootclasspath/a:/usr/lib/jvm/java/lib/tools.jar:/usr/lib/jvm/java/lib/dt.jar -Djdeveloper.system_http_proxy=DIRECT -Djdeveloper.system_http_non_proxy_hosts= -Dsun.java2d.noddraw=true -Dnetbeans.home=../../ide/bin/../../netbeans/platform/ -Dnetbeans.logger.console=true -Dexcluded.modules=org.eclipse.osgi -Dide.cluster.dirs=../../ide/bin/../../netbeans/fcpbridge/:../../ide/bin/../../netbeans/ide/:../../ide/bin/../../netbeans/../ -Xverify:none -Doracle.ide.extension.HooksProcessingMode=LAZY -Dorg.eclipse.equinox.simpleconfigurator.configUrl=file:bundles.info -Dosgi.bundles=file:../../ide/bin/../ide/lib/oracle.ide.osgi.jar@3:start -Dosgi.bundles.defaultStartLevel=1 -Dosgi.configuration.cascaded=false -Dosgi.noShutdown=true -Dorg.osgi.framework.bootdelegation=* -Dosgi.parentClassloader=app -Dosgi.locking=none -Xbootclasspath/p:../../ide/bin/../../rdbms/jlib/ojdi.jar -Dosgi.classloader.type=parallel -Dosgi.bundlefile.limit=500 -Dide.feedback-server=ide.us.oracle.com -Djavax.xml.transform.TransformerFactory=oracle.ide.xml.switchable.SwitchableTransformerFactory -Djavax.xml.stream.XMLInputFactory=com.ctc.wstx.stax.WstxInputFactory -Djavax.xml.stream.util.XMLEventAllocator=oracle.ideimpl.xml.stream.XMLEventAllocatorImpl -Doracle.ide.reportEDTViolations=bug -Doracle.ide.reportEDTViolations.exceptionsfile=../../ide/bin/../../ide/bin/swing-thread-violations.conf -Xms128M -Xmx800M -Dide.update.usage.servers=http://www.oracle.com/webfolder/technetwork/sqldeveloper/usage.xml -Doracle.ide.util.AddinPolicyUtils.OVERRIDE_FLAG=true -Dsun.java2d.ddoffscreen=false -Dwindows.shell.font.languages= -XX:MaxPermSize=256M -Doracle.ide.startup.features=sqldeveloper -Doracle.ide.osgi.boot.api.OJStartupHook=oracle.dbtools.raptor.startup.HomeSupport -Doracle.jdbc.mapDateToTimestamp=false -Doracle.jdbc.autoCommitSpecCompliant=false -Doracle.jdbc.useFetchSizeWithLongColumn=true -Dide.AssertTracingDisabled=true -Doracle.ide.util.AddinPolicyUtils.OVERRIDE_FLAG=true -Djava.util.logging.config.file=logging.conf -Dsqldev.debug=false '-Dide.conf=\"/opt/sqldeveloper/sqldeveloper/bin/sqldeveloper.conf\"' '-Duser.conf=\"/home/cnangel/.sqldeveloper/4.0.0/product.conf\"' '-Dtool.user.conf=\"/home/cnangel/.sqldeveloper/4.0.0/sqldeveloper.conf\"' '-Dide.startingcwd=\"/opt/sqldeveloper/sqldeveloper/bin\"' -classpath ../../ide/bin/../../ide/lib/ide-boot.jar:../../ide/bin/../../netbeans/platform/lib/boot.jar:../../ide/bin/../../netbeans/platform/lib/org-openide-util.jar:../../ide/bin/../../netbeans/platform/lib/org-openide-util-lookup.jar:../../ide/bin/../../netbeans/platform/lib/org-openide-modules.jar:../../ide/bin/../../ide/lib/fcpboot.jar:../../ide/bin/../../ide/lib/xml-factory.jar:../../ide/bin/../../ide/lib/woodstox-core-asl-4.2.0.jar:../../ide/bin/../../ide/lib/stax2-api-3.1.1.jar:../lib/oracle.sqldeveloper.homesupport.jar oracle.ide.osgi.boot.OracleIdeLauncher
crash_function: crash_handler
executable:     /usr/lib/jvm/java-1.7.0-openjdk-1.7.0.60-2.4.3.0.fc20.x86_64/bin/java
kernel:         3.12.6-300.fc20.x86_64
runlevel:       N 5
type:           CCpp
uid:            1000

Truncated backtrace:
Thread no. 1 (6 frames)
 #4 crash_handler at /usr/src/debug/java-1.7.0-openjdk-1.7.0.60-2.4.3.0.fc20.x86_64/openjdk/hotspot/src/os/linux/vm/vmError_linux.cpp:106
 #6 os::print_hex_dump at /usr/src/debug/java-1.7.0-openjdk-1.7.0.60-2.4.3.0.fc20.x86_64/openjdk/hotspot/src/share/vm/runtime/os.cpp:776
 #7 os::print_context at /usr/src/debug/java-1.7.0-openjdk-1.7.0.60-2.4.3.0.fc20.x86_64/openjdk/hotspot/src/os_cpu/linux_x86/vm/os_linux_x86.cpp:813
 #8 VMError::report at /usr/src/debug/java-1.7.0-openjdk-1.7.0.60-2.4.3.0.fc20.x86_64/openjdk/hotspot/src/share/vm/utilities/vmError.cpp:536
 #12 ??
 #13 __nptl_deallocate_tsd at pthread_create.c:157

Comment 1 cnangel 2014-01-13 03:44:54 UTC
Created attachment 849119 [details]
File: backtrace

Comment 2 cnangel 2014-01-13 03:44:56 UTC
Created attachment 849120 [details]
File: cgroup

Comment 3 cnangel 2014-01-13 03:44:58 UTC
Created attachment 849121 [details]
File: core_backtrace

Comment 4 cnangel 2014-01-13 03:45:00 UTC
Created attachment 849122 [details]
File: dso_list

Comment 5 cnangel 2014-01-13 03:45:02 UTC
Created attachment 849123 [details]
File: environ

Comment 6 cnangel 2014-01-13 03:45:04 UTC
Created attachment 849124 [details]
File: hs_err.log

Comment 7 cnangel 2014-01-13 03:45:06 UTC
Created attachment 849125 [details]
File: limits

Comment 8 cnangel 2014-01-13 03:45:08 UTC
Created attachment 849126 [details]
File: maps

Comment 9 cnangel 2014-01-13 03:45:11 UTC
Created attachment 849127 [details]
File: open_fds

Comment 10 cnangel 2014-01-13 03:45:13 UTC
Created attachment 849128 [details]
File: proc_pid_status

Comment 11 cnangel 2014-01-13 03:45:15 UTC
Created attachment 849129 [details]
File: var_log_messages

Comment 12 Deepak Bhole 2014-01-13 15:24:24 UTC
Is this reproducible?

Comment 13 cnangel 2014-01-13 17:46:32 UTC
yes,  it crash when sqldeveloper starting

(In reply to Deepak Bhole from comment #12)
> Is this reproducible?

Comment 14 Deepak Bhole 2014-01-14 21:28:52 UTC
How do I reproduce it locally (i.e. where do I download sqldeveloper, any switches to start with, etc.)?

Comment 15 cnangel 2014-01-16 09:48:10 UTC
I download  from http://www.oracle.com/technetwork/developer-tools/sql-developer/downloads/index.html?ssSourceSiteId=ocomen
the version of sqldeveloper is 4.0.0.13.80
after crashed, I try set JAVA_HOME and download new jdk from oracle replace openjdk, but still crash.
but i download old version of sqldeveloper(3.2.20.09.87), now it' working fine.

Comment 16 Elliott Baron 2014-01-31 23:40:42 UTC
Created attachment 858005 [details]
Backtrace of GLib call to pthread_key_create

Comment 17 Elliott Baron 2014-01-31 23:41:46 UTC
Created attachment 858006 [details]
Reproducer for GLib segfault

Comment 18 Elliott Baron 2014-01-31 23:44:20 UTC
I believe this is actually a bug in GLib. When we create a thread that calls dlopen and dlclose on libgobject, a segfault occurs when deallocating that thread in  __nptl_deallocate_tsd. A phtread_key_t is created in the backtrace attached in pthread_key_create.txt, which specifies private_thread_memory_cleanup as its destructor. After dlclose is called, this key still remains. When __nptl_deallocate_tsd is called from our thread, it attempts to invoke the destructor of this leftover key. Since libgobject has been unloaded, the destructor is no longer in memory and we get a segfault.

I have included a simple reproducer as glibbug.c.

Comment 19 jiri vanek 2015-02-09 12:51:40 UTC
This seems to be fixed in f21 (at least this reproducer returns 0 - on f20 keep segfaulting) (f21 glibc 2.20, f20 glibc 2.18)

Comment 20 Fedora End Of Life 2015-05-29 10:28:08 UTC
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Approximately 4 (four) weeks from now Fedora will stop maintaining
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Comment 21 Fedora End Of Life 2015-06-30 00:50:50 UTC
Fedora 20 changed to end-of-life (EOL) status on 2015-06-23. Fedora 20 is
no longer maintained, which means that it will not receive any further
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