Bug 1358885

Summary: [abrt] dnf: load_ext(): python3.5 killed by SIGABRT
Product: [Fedora] Fedora Reporter: Jason Scalia <jscalia>
Component: dnfAssignee: rpm-software-management
Status: CLOSED NOTABUG QA Contact: Fedora Extras Quality Assurance <extras-qa>
Severity: unspecified Docs Contact:
Priority: unspecified    
Version: 24CC: ignatenko, jscalia, jsilhan, mluscon, packaging-team-maint, pnemade, rpm-software-management, ssmetana, vmukhame
Target Milestone: ---   
Target Release: ---   
Hardware: x86_64   
OS: Unspecified   
URL: https://retrace.fedoraproject.org/faf/reports/bthash/bfd583bf253c8bd9388a59616b5fd012285c53a5
Whiteboard: abrt_hash:a6110cad1b351cbc36847d4ae07cc17e0ba154c0;VARIANT_ID=server;
Fixed In Version: Doc Type: If docs needed, set a value
Doc Text:
Story Points: ---
Clone Of: Environment:
Last Closed: 2016-08-02 09:31:09 UTC Type: ---
Regression: --- Mount Type: ---
Documentation: --- CRM:
Verified Versions: Category: ---
oVirt Team: --- RHEL 7.3 requirements from Atomic Host:
Cloudforms Team: --- Target Upstream Version:
Embargoed:
Attachments:
Description Flags
File: _var_log_dnf.log
none
File: backtrace
none
File: cgroup
none
File: core_backtrace
none
File: dnf-makecache.log
none
File: dso_list
none
File: environ
none
File: limits
none
File: maps
none
File: mountinfo
none
File: namespaces
none
File: open_fds
none
File: proc_pid_status
none
File: var_log_messages none

Description Jason Scalia 2016-07-21 17:22:13 UTC 
Description of problem:

When running dnf update as root or invoking via sudo, I receive the following error:

[root@nutshell ~]# dnf update
python3: /builddir/build/BUILD/hawkey-0.6.3/src/sack.c:326: load_ext: Assertion `ret == 0' failed.
Aborted (core dumped)


Performing the following temporarily fixes it:

dnf clean all

Confirm working:

dnf update

This seems to fix the issue temporarily (I can update packages as needed), however the next time dnf is run it returns the above.

Version-Release number of selected component:
dnf-1.1.9-2.fc24

Additional info:
reporter:       libreport-2.7.1
backtrace_rating: 4
cmdline:        /usr/bin/python3 /usr/bin/dnf makecache timer
crash_function: load_ext
executable:     /usr/bin/python3.5
global_pid:     5175
kernel:         4.6.3-300.fc24.x86_64
pkg_fingerprint: 73BD E983 81B4 6521
pkg_vendor:     Fedora Project
reproducible:   The problem occurs regularly
runlevel:       N 3
type:           CCpp
uid:            0

Truncated backtrace:
Thread no. 1 (10 frames)
 #4 load_ext at /usr/src/debug/hawkey-0.6.3/src/sack.c:326
 #5 hy_sack_load_repo at /usr/src/debug/hawkey-0.6.3/src/sack.c:1012
 #6 load_repo at /usr/src/debug/hawkey-0.6.3/src/python/sack-py.c:455
 #7 PyCFunction_Call at /usr/src/debug/Python-3.5.1/Objects/methodobject.c:98
 #8 do_call at /usr/src/debug/Python-3.5.1/Python/ceval.c:4913
 #9 call_function at /usr/src/debug/Python-3.5.1/Python/ceval.c:4712
 #10 PyEval_EvalFrameEx at /usr/src/debug/Python-3.5.1/Python/ceval.c:3209
 #11 fast_function at /usr/src/debug/Python-3.5.1/Python/ceval.c:4783
 #12 call_function at /usr/src/debug/Python-3.5.1/Python/ceval.c:4710
 #13 PyEval_EvalFrameEx at /usr/src/debug/Python-3.5.1/Python/ceval.c:3209
Comment 1 Jason Scalia 2016-07-21 17:22:19 UTC 
Created attachment 1182621 [details]
File: _var_log_dnf.log
Comment 2 Jason Scalia 2016-07-21 17:22:21 UTC 
Created attachment 1182622 [details]
File: backtrace
Comment 3 Jason Scalia 2016-07-21 17:22:22 UTC 
Created attachment 1182623 [details]
File: cgroup
Comment 4 Jason Scalia 2016-07-21 17:22:24 UTC 
Created attachment 1182624 [details]
File: core_backtrace
Comment 5 Jason Scalia 2016-07-21 17:22:25 UTC 
Created attachment 1182625 [details]
File: dnf-makecache.log
Comment 6 Jason Scalia 2016-07-21 17:22:26 UTC 
Created attachment 1182626 [details]
File: dso_list
Comment 7 Jason Scalia 2016-07-21 17:22:28 UTC 
Created attachment 1182627 [details]
File: environ
Comment 8 Jason Scalia 2016-07-21 17:22:29 UTC 
Created attachment 1182628 [details]
File: limits
Comment 9 Jason Scalia 2016-07-21 17:22:31 UTC 
Created attachment 1182629 [details]
File: maps
Comment 10 Jason Scalia 2016-07-21 17:22:32 UTC 
Created attachment 1182630 [details]
File: mountinfo
Comment 11 Jason Scalia 2016-07-21 17:22:33 UTC 
Created attachment 1182631 [details]
File: namespaces
Comment 12 Jason Scalia 2016-07-21 17:22:35 UTC 
Created attachment 1182632 [details]
File: open_fds
Comment 13 Jason Scalia 2016-07-21 17:22:36 UTC 
Created attachment 1182633 [details]
File: proc_pid_status
Comment 14 Jason Scalia 2016-07-21 17:22:37 UTC 
Created attachment 1182634 [details]
File: var_log_messages
Comment 15 Michal Luscon 2016-08-01 11:32:59 UTC 
Hi, does this happen with the system hawkey or your own checkout?
Comment 16 Jason Scalia 2016-08-01 13:14:16 UTC 
Hello,

Thanks for the reply, system hawkey.


$ rpm -qi hawkey
Name        : hawkey
Version     : 0.6.3
Release     : 2.fc24
Architecture: x86_64
Install Date: Thu 23 Jun 2016 09:45:06 AM EDT
Group       : Unspecified
Size        : 172247
License     : LGPLv2+
Signature   : RSA/SHA256, Fri 29 Apr 2016 12:06:33 PM EDT, Key ID 73bde98381b46521
Source RPM  : hawkey-0.6.3-2.fc24.src.rpm
Build Date  : Fri 29 Apr 2016 06:58:50 AM EDT
Build Host  : buildhw-02.phx2.fedoraproject.org
Relocations : (not relocatable)
Packager    : Fedora Project
Vendor      : Fedora Project
URL         : https://github.com/rpm-software-management/hawkey
Summary     : Library providing simplified C and Python API to libsolv
Description :
A Library providing simplified C and Python API to libsolv.
Comment 17 Štěpán Smetana 2016-08-02 09:31:09 UTC 
Problem is caused by package https://www.cloudflare.com/static/misc/mod_cloudflare/centos/mod_cloudflare-el7-x86_64.latest.rpm
The package is built for RHEL7 or EPEL7 therefor some incompatibility is expected. If you will have same problem with the package that is build for fedora:24 please try to contact maintainers of the package.

Additionaly I provide steps to reproduce:
1. dnf install -y https://www.cloudflare.com/static/misc/mod_cloudflare/centos/mod_cloudflare-el7-x86_64.latest.rpm
2. dnf install X  // not fail
3. dnf install X  // fail

4. dnf clean metadata/dbcache
5. dnf install X  // not fail
6. dnf install X  // fail