Bug 1803424

Summary:	python3-pynwb-1.1.0-2.fc31 requires python3.7dist(hdmf) = 1.3.3
Product:	[Fedora] Fedora	Reporter:	Edgar Hoch <edgar.hoch>
Component:	python-pynwb	Assignee:	Ankur Sinha (FranciscoD) <sanjay.ankur>
Status:	CLOSED ERRATA	QA Contact:	Fedora Extras Quality Assurance <extras-qa>
Severity:	low	Docs Contact:
Priority:	unspecified
Version:	31	CC:	bazanluis20, neuro-sig, sanjay.ankur
Target Milestone:	---
Target Release:	---
Hardware:	x86_64
OS:	Linux
Whiteboard:
Fixed In Version:	python-pynwb-1.2.1-1.fc30 python-pynwb-1.2.1-1.fc31	Doc Type:	If docs needed, set a value
Doc Text:		Story Points:	---
Clone Of:		Environment:
Last Closed:	2020-02-25 14:38:51 UTC	Type:	Bug
Regression:	---	Mount Type:	---
Documentation:	---	CRM:
Verified Versions:		Category:	---
oVirt Team:	---	RHEL 7.3 requirements from Atomic Host:
Cloudforms Team:	---	Target Upstream Version:
Embargoed:

Description Edgar Hoch 2020-02-16 05:20:59 UTC

Description of problem:

dnf upgrade prints:
 Problem 1: cannot install the best update candidate for package python3-pynwb-1.1.0-2.fc31.noarch
  - nothing provides python3.7dist(hdmf) = 1.3.3 needed by python3-pynwb-1.1.2-1.fc31.noarch

python3-hdmf doesn't provide python3.7dist(hdmf) = 1.3.3 but version 1.5.4:

# rpm -q --provides python3-hdmf
python-hdmf = 1.5.4-1.fc31
python3-hdmf = 1.5.4-1.fc31
python3.7dist(hdmf) = 1.5.4
python3dist(hdmf) = 1.5.4


I'm not sure why the package requires exact this version for hdmf:

# rpm -q --requires -p python3-pynwb-1.1.2-1.fc31.noarch.rpm 
python(abi) = 3.7
python3.7dist(chardet)
python3.7dist(h5py)
python3.7dist(hdmf) = 1.3.3
python3.7dist(numpy)
python3.7dist(pandas)
python3.7dist(python-dateutil)
python3.7dist(ruamel.yaml)
python3.7dist(six)
rpmlib(CompressedFileNames) <= 3.0.4-1
rpmlib(FileDigests) <= 4.6.0-1
rpmlib(PartialHardlinkSets) <= 4.0.4-1
rpmlib(PayloadFilesHavePrefix) <= 4.0-1
rpmlib(PayloadIsZstd) <= 5.4.18-1



Version-Release number of selected component (if applicable):
python3-pynwb-1.1.0-2.fc31.noarch
python3-hdmf-1.5.4-1.fc31.noarch


How reproducible:
Always.

Comment 1 Ankur Sinha (FranciscoD) 2020-02-16 12:57:12 UTC

Thanks for the bug report. Upstream has released a new version that works with hdmf-1.5.4, so I'll update this package here and that should fix this issue too.

Cheers

Comment 2 Fedora Update System 2020-02-16 13:19:05 UTC

FEDORA-2020-01ebf06fc8 has been submitted as an update to Fedora 30. https://bodhi.fedoraproject.org/updates/FEDORA-2020-01ebf06fc8

Comment 3 Fedora Update System 2020-02-16 13:19:09 UTC

FEDORA-2020-2f2d887790 has been submitted as an update to Fedora 31. https://bodhi.fedoraproject.org/updates/FEDORA-2020-2f2d887790

Comment 4 Ankur Sinha (FranciscoD) 2020-02-16 13:20:48 UTC

Please test the update and give it karma to confirm that it works:

https://fedoraproject.org/wiki/QA:Updates_Testing

Comment 5 Fedora Update System 2020-02-17 01:03:05 UTC

python-pynwb-1.2.1-1.fc31 has been pushed to the Fedora 31 testing repository. If problems still persist, please make note of it in this bug report.
See https://fedoraproject.org/wiki/QA:Updates_Testing for
instructions on how to install test updates.
You can provide feedback for this update here: https://bodhi.fedoraproject.org/updates/FEDORA-2020-2f2d887790

Comment 6 Fedora Update System 2020-02-17 01:14:58 UTC

python-pynwb-1.2.1-1.fc30 has been pushed to the Fedora 30 testing repository. If problems still persist, please make note of it in this bug report.
See https://fedoraproject.org/wiki/QA:Updates_Testing for
instructions on how to install test updates.
You can provide feedback for this update here: https://bodhi.fedoraproject.org/updates/FEDORA-2020-01ebf06fc8

Comment 7 Fedora Update System 2020-02-25 14:38:51 UTC

python-pynwb-1.2.1-1.fc30 has been pushed to the Fedora 30 stable repository. If problems still persist, please make note of it in this bug report.

Comment 8 Fedora Update System 2020-02-26 17:58:51 UTC

python-pynwb-1.2.1-1.fc31 has been pushed to the Fedora 31 stable repository. If problems still persist, please make note of it in this bug report.