Bug 2132743

Summary:	F35FailsToInstall: python3-pynwb
Product:	[Fedora] Fedora	Reporter:	Miro Hrončok <mhroncok>
Component:	python-pynwb	Assignee:	Ben Beasley <code>
Status:	CLOSED ERRATA	QA Contact:	Fedora Extras Quality Assurance <extras-qa>
Severity:	unspecified	Docs Contact:
Priority:	unspecified
Version:	35	CC:	bazanluis20, code, neuro-sig
Target Milestone:	---
Target Release:	---
Hardware:	Unspecified
OS:	Unspecified
Whiteboard:
Fixed In Version:	python-pynwb-2.0.0-5.fc35	Doc Type:	If docs needed, set a value
Doc Text:		Story Points:	---
Clone Of:		Environment:
Last Closed:	2022-10-15 21:26:34 UTC	Type:	---
Regression:	---	Mount Type:	---
Documentation:	---	CRM:
Verified Versions:		Category:	---
oVirt Team:	---	RHEL 7.3 requirements from Atomic Host:
Cloudforms Team:	---	Target Upstream Version:
Embargoed:
Bug Depends On:
Bug Blocks:	1927313

Description Miro Hrončok 2022-10-06 13:54:37 UTC

Hello,

Please note that this comment was generated automatically. If you feel that this output has mistakes, please contact me via email (mhroncok).

Your package (python-pynwb) Fails To Install in Fedora 35:

can't install python3-pynwb:
  - nothing provides (python3.10dist(numpy) < 1.22 with python3.10dist(numpy) >= 1.16) needed by python3-pynwb-2.0.0-4.fc35.noarch
  
If you know about this problem and are planning on fixing it, please acknowledge so by setting the bug status to ASSIGNED. If you don't have time to maintain this package, consider orphaning it, so maintainers of dependent packages realize the problem.


If you don't react accordingly to the policy for FTBFS/FTI bugs (https://docs.fedoraproject.org/en-US/fesco/Fails_to_build_from_source_Fails_to_install/), your package may be orphaned in 8+ weeks.


P.S. The data was generated solely from koji buildroot, so it might be newer than the latest compose or the content on mirrors. To reproduce, use the koji/local repo only, e.g. in mock:

    $ mock -r fedora-35-x86_64 --config-opts mirrored=False install python3-pynwb


P.P.S. If this bug has been reported in the middle of upgrading multiple dependent packages, please consider using side tags: https://docs.fedoraproject.org/en-US/fesco/Updates_Policy/#updating-inter-dependent-packages

Thanks!

Comment 1 Ben Beasley 2022-10-06 17:12:17 UTC

This is caused by a numpy update, https://bodhi.fedoraproject.org/updates/FEDORA-2022-b04b04f979, in combination with unnecessary pynwb upstream upper-bounding of dependency versions, which is removed in later release branches.

It should be sufficient to simply unpin the numpy version here and in python-hdmf (bug 2132742).

Comment 2 Fedora Update System 2022-10-06 18:28:37 UTC

FEDORA-2022-b5fd2fe13e has been submitted as an update to Fedora 35. https://bodhi.fedoraproject.org/updates/FEDORA-2022-b5fd2fe13e

Comment 3 Fedora Update System 2022-10-07 16:02:10 UTC

FEDORA-2022-b5fd2fe13e has been pushed to the Fedora 35 testing repository.
Soon you'll be able to install the update with the following command:
`sudo dnf upgrade --enablerepo=updates-testing --refresh --advisory=FEDORA-2022-b5fd2fe13e`
You can provide feedback for this update here: https://bodhi.fedoraproject.org/updates/FEDORA-2022-b5fd2fe13e

See also https://fedoraproject.org/wiki/QA:Updates_Testing for more information on how to test updates.

Comment 4 Fedora Update System 2022-10-15 21:26:34 UTC

FEDORA-2022-b5fd2fe13e has been pushed to the Fedora 35 stable repository.
If problem still persists, please make note of it in this bug report.