Bug 2231587

Summary:	Transaction fails when installing openms due to file conflict in /usr/lib/.build-id/
Product:	[Fedora] Fedora	Reporter:	ktsh.tanaka.2020
Component:	openms	Assignee:	Antonio T. sagitter <sagitterghostproton.me>
Status:	CLOSED ERRATA	QA Contact:	Fedora Extras Quality Assurance <extras-qa>
Severity:	medium	Docs Contact:
Priority:	unspecified
Version:	42	CC:	gui1ty
Target Milestone:	---	Keywords:	Reopened
Target Release:	---
Hardware:	x86_64
OS:	Linux
Whiteboard:
Fixed In Version:	openms-3.0.0-2.fc40 openms-3.0.0-2.fc39 openms-3.0.0-2.fc38 openms-3.5.0-1.20260107git91afebf.fc43	Doc Type:	If docs needed, set a value
Doc Text:		Story Points:	---
Clone Of:		Environment:
Last Closed:	2026-01-17 00:48:13 UTC	Type:	Bug
Regression:	---	Mount Type:	---
Documentation:	---	CRM:
Verified Versions:		Category:	---
oVirt Team:	---	RHEL 7.3 requirements from Atomic Host:
Cloudforms Team:	---	Target Upstream Version:
Embargoed:

Description ktsh.tanaka.2020 2023-08-12 07:09:34 UTC

Description of problem:


Version-Release number of selected component (if applicable):


How reproducible:


Steps to Reproduce:
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Actual results:


Expected results:


Additional info:

: File /usr/lib/.build-id/8a/c2bf7bd15a5aeb09620726b3f8953a68ad7962 (from package openms-3.0.0-1.fc38.x86_64) is a file from package qt5-qtdeclarative-5.15.10-1.fc38.x86_64 and competing

Comment 1 Troy Dawson 2023-08-14 13:50:17 UTC

The only time .build-id have a conflict is if two rpms have the same binary file.

If we look at /usr/lib/.build-id/8a/c2bf7bd15a5aeb09620726b3f8953a68ad7962 we see that is the case.
It is pointing to /usr/lib64/OpenMS/libQt5QuickWidgets.so.5.15.10
If we do a diff between /usr/lib64/OpenMS/libQt5QuickWidgets.so.5.15.10 and /usr/lib64/libQt5QuickWidgets.so.5.15.10 provided by qt5-qtdeclarative-5.15.10-1.fc38.x86_64 we see they are identical.

I don't know how or why that happened, but I am not the maintainer of openms, so I will let them get it fixed.

Comment 2 Fedora Update System 2023-08-14 20:37:42 UTC

FEDORA-2023-9fcd1bb0eb has been submitted as an update to Fedora 40. https://bodhi.fedoraproject.org/updates/FEDORA-2023-9fcd1bb0eb

Comment 3 Fedora Update System 2023-08-14 20:39:39 UTC

FEDORA-2023-9fcd1bb0eb has been pushed to the Fedora 40 stable repository.
If problem still persists, please make note of it in this bug report.

Comment 4 Fedora Update System 2023-08-14 22:24:49 UTC

FEDORA-2023-e0bbe7c488 has been submitted as an update to Fedora 39. https://bodhi.fedoraproject.org/updates/FEDORA-2023-e0bbe7c488

Comment 5 Fedora Update System 2023-08-14 22:27:37 UTC

FEDORA-2023-e0bbe7c488 has been pushed to the Fedora 39 stable repository.
If problem still persists, please make note of it in this bug report.

Comment 6 Antonio T. sagitter 2023-08-15 12:38:37 UTC

Fedora 38 update: https://bodhi.fedoraproject.org/updates/FEDORA-2023-f8a695d80e

Comment 7 Sandro 2024-12-22 22:25:42 UTC

This appears to be happening again. Not sure why, though.

To reproduce:

mock -r fedora-rawhide-x86_64 openms

It fails with:

Transaction failed: Rpm transaction failed.
  - file /usr/lib/.build-id/17/9527af97e91eb78760b49f641470d951e73467 from install of openms-1:3.1.0-0.16.pre1.fc42.x86_64 conflicts with file from package qt5-qtdeclarative-5.15.15-1.fc42.x86_64

Querying for the file:

$ fedrq pkgs --resolve-packages /usr/lib/.build-id/17/9527af97e91eb78760b49f641470d951e73467
openms-1:3.1.0-0.16.pre1.fc42.x86_64
qt5-qtdeclarative-5.15.15-1.fc42.x86_64

Installing qt5-qtdeclarative by itself, I can see that /usr/lib/.build-id/17/9527af97e91eb78760b49f641470d951e73467 points to /usr/lib64/libQt5QuickWidgets.so.5.15.15

Comment 8 Aoife Moloney 2025-02-26 12:54:10 UTC

This bug appears to have been reported against 'rawhide' during the Fedora Linux 42 development cycle.
Changing version to 42.

Comment 9 Fedora Update System 2026-01-08 20:12:25 UTC

FEDORA-2026-4d1e0aeb9b (autowrap-0.25.0-2.fc43 and openms-3.5.0-1.20260107git91afebf.fc43) has been submitted as an update to Fedora 43.
https://bodhi.fedoraproject.org/updates/FEDORA-2026-4d1e0aeb9b

Comment 10 Fedora Update System 2026-01-09 01:32:52 UTC

FEDORA-2026-4d1e0aeb9b has been pushed to the Fedora 43 testing repository.
Soon you'll be able to install the update with the following command:
`sudo dnf upgrade --enablerepo=updates-testing --refresh --advisory=FEDORA-2026-4d1e0aeb9b`
You can provide feedback for this update here: https://bodhi.fedoraproject.org/updates/FEDORA-2026-4d1e0aeb9b

See also https://fedoraproject.org/wiki/QA:Updates_Testing for more information on how to test updates.

Comment 11 Fedora Update System 2026-01-17 00:48:13 UTC

FEDORA-2026-4d1e0aeb9b (autowrap-0.25.0-2.fc43 and openms-3.5.0-1.20260107git91afebf.fc43) has been pushed to the Fedora 43 stable repository.
If problem still persists, please make note of it in this bug report.