Bug 684523

Summary: [abrt] chemtool-1.6.12-3.fc15: strlen: Process /usr/bin/chemtool was killed by signal 11 (SIGSEGV)
Product: [Fedora] Fedora Reporter: Patsev Anton <patsev.anton>
Component: chemtoolAssignee: Dominik 'Rathann' Mierzejewski <dominik>
Status: CLOSED ERRATA QA Contact: Fedora Extras Quality Assurance <extras-qa>
Severity: unspecified Docs Contact:
Priority: unspecified    
Version: 15CC: dominik, itamar, jspendel, martin, mdmpsyd, paul, richard_s_burton
Target Milestone: ---   
Target Release: ---   
Hardware: i686   
OS: Unspecified   
Whiteboard: abrt_hash:d52aeedfa1ac45890f58a1fd1d3d61127c27b257
Fixed In Version: chemtool-1.6.13-1.fc15 Doc Type: Bug Fix
Doc Text:
Story Points: ---
Clone Of: Environment:
Last Closed: 2012-05-01 00:51:24 UTC Type: ---
Regression: --- Mount Type: ---
Documentation: --- CRM:
Verified Versions: Category: ---
oVirt Team: --- RHEL 7.3 requirements from Atomic Host:
Cloudforms Team: --- Target Upstream Version:
Attachments:
Description Flags
File: backtrace
none
patch applied in Debian none

Description Patsev Anton 2011-03-13 10:22:43 UTC 
abrt version: 1.1.17
architecture: i686
Attached file: backtrace, 19474 bytes
cmdline: chemtool
component: chemtool
Attached file: coredump, 11624448 bytes
crash_function: strlen
executable: /usr/bin/chemtool
kernel: 2.6.38-0.rc8.git0.1.fc15.i686.PAE
package: chemtool-1.6.12-3.fc15
rating: 4
reason: Process /usr/bin/chemtool was killed by signal 11 (SIGSEGV)
release: Fedora release 15 (Lovelock)
time: 1300011672
uid: 500

How to reproduce
-----
1. Install fresh fedora 15
2. Yum update
3. Run chemtool
Comment 1 Patsev Anton 2011-03-13 10:22:46 UTC 
Created attachment 483969 [details]
File: backtrace
Comment 2 martin 2011-05-30 21:26:27 UTC 
I suspect that the root cause is a misdeclaration of the xpm_font pixmap
in line 2 of file bitmap1.h - three colors are declared but only two used:
"5 24 3 1" should read "5 24 2 1".
I cannot reproduce the crash (on my non-fedora systems), but the above change
fixes a suspicious warning from valgrind - somebody please confirm.

Martin (upstream, author)
Comment 3 Daniel Leidert 2011-11-27 10:47:35 UTC 
Created attachment 537038 [details]
patch applied in Debian

For Debian this patch fixed it:

http://anonscm.debian.org/viewvc/debichem/unstable/chemtool/debian/patches/650112_fix_segfault_at_startup.patch?revision=3139&view=co

Note that bug 708786 and bug 746452 seem to be duplicates of this bug
Comment 4 Fedora Update System 2012-03-12 21:08:21 UTC 
chemtool-1.6.13-1.fc15 has been submitted as an update for Fedora 15.
https://admin.fedoraproject.org/updates/chemtool-1.6.13-1.fc15
Comment 5 Fedora Update System 2012-03-15 02:25:57 UTC 
Package chemtool-1.6.13-1.fc15:
* should fix your issue,
* was pushed to the Fedora 15 testing repository,
* should be available at your local mirror within two days.
Update it with:
# su -c 'yum update --enablerepo=updates-testing chemtool-1.6.13-1.fc15'
as soon as you are able to.
Please go to the following url:
https://admin.fedoraproject.org/updates/FEDORA-2012-3730/chemtool-1.6.13-1.fc15
then log in and leave karma (feedback).
Comment 6 abrt-bot 2012-03-30 14:18:30 UTC 
*** Bug 708786 has been marked as a duplicate of this bug. ***
Comment 7 Fedora Update System 2012-05-01 00:51:24 UTC 
chemtool-1.6.13-1.fc15 has been pushed to the Fedora 15 stable repository.  If problems still persist, please make note of it in this bug report.