Bug 715660

Summary: [abrt] openmpi-1.5-3.fc15: vasprintf: Process /usr/lib64/openmpi/bin/orte-top was killed by signal 11 (SIGSEGV)
Product: [Fedora] Fedora Reporter: Alex Chernyakhovsky <achernya>
Component: openmpiAssignee: Jay Fenlason <fenlason>
Status: CLOSED ERRATA QA Contact: Fedora Extras Quality Assurance <extras-qa>
Severity: unspecified Docs Contact:
Priority: unspecified    
Version: 15CC: dledford, fenlason, jfeeney
Target Milestone: ---   
Target Release: ---   
Hardware: x86_64   
OS: Unspecified   
Whiteboard: abrt_hash:d26f7c002b8c69a93ebc4ea8f5bb1a23367c2300
Fixed In Version: openmpi-1.5.4-3.fc15 Doc Type: Bug Fix
Doc Text:
Story Points: ---
Clone Of: Environment:
Last Closed: 2012-02-01 19:28:27 UTC Type: ---
Regression: --- Mount Type: ---
Documentation: --- CRM:
Verified Versions: Category: ---
oVirt Team: --- RHEL 7.3 requirements from Atomic Host:
Cloudforms Team: --- Target Upstream Version:
Attachments:
Description Flags
File: backtrace none

Description Alex Chernyakhovsky 2011-06-23 14:41:34 UTC 
abrt version: 2.0.1
architecture:   x86_64
cmdline:        orte-top --help
component:      openmpi
crash_function: vasprintf
executable:     /usr/lib64/openmpi/bin/orte-top
kernel:         2.6.38.8-32.fc15.x86_64
os_release:     Fedora release 15 (Lovelock)
package:        openmpi-1.5-3.fc15
rating:         4
reason:         Process /usr/lib64/openmpi/bin/orte-top was killed by signal 11 (SIGSEGV)
time:           Thu Jun 23 10:32:01 2011
uid:            500
username:       alex

backtrace:      Text file, 249176 bytes

dsos:
:/lib64/libm-2.14.so glibc-2.14-2.x86_64 (Fedora Project) 1308760926
:/lib64/libdl-2.14.so glibc-2.14-2.x86_64 (Fedora Project) 1308760926
:/lib64/ld-2.14.so glibc-2.14-2.x86_64 (Fedora Project) 1308760926
:/usr/lib64/openmpi/lib/libopen-rte.so.1.0.0 openmpi-1.5-3.fc15.x86_64 (Fedora Project) 1308767693
:/lib64/libutil-2.14.so glibc-2.14-2.x86_64 (Fedora Project) 1308760926
:/lib64/libpthread-2.14.so glibc-2.14-2.x86_64 (Fedora Project) 1308760926
:/lib64/libgcc_s-4.6.0-20110530.so.1 libgcc-4.6.0-9.fc15.x86_64 (Fedora Project) 1308760909
:/lib64/libc-2.14.so glibc-2.14-2.x86_64 (Fedora Project) 1308760926
:/lib64/libnsl-2.14.so glibc-2.14-2.x86_64 (Fedora Project) 1308760926
:/usr/lib64/openmpi/bin/orte-top openmpi-1.5-3.fc15.x86_64 (Fedora Project) 1308767693

environ:
:MANPATH=/usr/share/man/openmpi-x86_64:/usr/share/man/mpich2:/usr/share/man:/usr/local/share/man
:MPI_INCLUDE=/usr/include/openmpi-x86_64
:ORBIT_SOCKETDIR=/tmp/orbit-alex
:XDG_SESSION_ID=1
:HOSTNAME=sphinx.searums.org
:IMSETTINGS_INTEGRATE_DESKTOP=yes
:GPG_AGENT_INFO=/tmp/keyring-v9FCeW/gpg:0:1
:TERM=xterm
:SHELL=/bin/bash
:XDG_SESSION_COOKIE=f8232f136fbb3d0153762a650000002e-1308773274.818155-311935820
:HISTSIZE=1000
:GJS_DEBUG_OUTPUT=stderr
:WINDOWID=35652287
:OLDPWD=/home/alex/hackArea/searums-tools/models
:GNOME_KEYRING_CONTROL=/tmp/keyring-v9FCeW
:'GJS_DEBUG_TOPICS=JS ERROR;JS LOG'
:IMSETTINGS_MODULE=none
:MPI_PYTHON_SITEARCH=/usr/lib64/python2.7/site-packages/openmpi
:USER=alex
:LS_COLORS=rs=0:di=01;34:ln=01;36:mh=00:pi=40;33:so=01;35:do=01;35:bd=40;33;01:cd=40;33;01:or=40;31;01:mi=01;05;37;41:su=37;41:sg=30;43:ca=30;41:tw=30;42:ow=34;42:st=37;44:ex=01;32:*.tar=01;31:*.tgz=01;31:*.arj=01;31:*.taz=01;31:*.lzh=01;31:*.lzma=01;31:*.tlz=01;31:*.txz=01;31:*.zip=01;31:*.z=01;31:*.Z=01;31:*.dz=01;31:*.gz=01;31:*.lz=01;31:*.xz=01;31:*.bz2=01;31:*.tbz=01;31:*.tbz2=01;31:*.bz=01;31:*.tz=01;31:*.deb=01;31:*.rpm=01;31:*.jar=01;31:*.war=01;31:*.ear=01;31:*.sar=01;31:*.rar=01;31:*.ace=01;31:*.zoo=01;31:*.cpio=01;31:*.7z=01;31:*.rz=01;31:*.jpg=01;35:*.jpeg=01;35:*.gif=01;35:*.bmp=01;35:*.pbm=01;35:*.pgm=01;35:*.ppm=01;35:*.tga=01;35:*.xbm=01;35:*.xpm=01;35:*.tif=01;35:*.tiff=01;35:*.png=01;35:*.svg=01;35:*.svgz=01;35:*.mng=01;35:*.pcx=01;35:*.mov=01;35:*.mpg=01;35:*.mpeg=01;35:*.m2v=01;35:*.mkv=01;35:*.ogm=01;35:*.mp4=01;35:*.m4v=01;35:*.mp4v=01;35:*.vob=01;35:*.qt=01;35:*.nuv=01;35:*.wmv=01;35:*.asf=01;35:*.rm=01;35:*.rmvb=01;35:*.flc=01;35:*.avi=01;35:*.fli=01;35:*.flv=01;35:*.gl=01;35:*.dl=01;35:*.xcf=01;35:*.xwd=01;35:*.yuv=01;35:*.cgm=01;35:*.emf=01;35:*.axv=01;35:*.anx=01;35:*.ogv=01;35:*.ogx=01;35:*.aac=01;36:*.au=01;36:*.flac=01;36:*.mid=01;36:*.midi=01;36:*.mka=01;36:*.mp3=01;36:*.mpc=01;36:*.ogg=01;36:*.ra=01;36:*.wav=01;36:*.axa=01;36:*.oga=01;36:*.spx=01;36:*.xspf=01;36:
:LD_LIBRARY_PATH=/usr/lib64/openmpi/lib:/usr/lib64/mpich2/lib
:SSH_AUTH_SOCK=/tmp/keyring-v9FCeW/ssh
:MPI_LIB=/usr/lib64/openmpi/lib
:USERNAME=alex
:SESSION_MANAGER=local/unix:@/tmp/.ICE-unix/1591,unix/unix:/tmp/.ICE-unix/1591
:DESKTOP_SESSION=gnome
:MAIL=/var/spool/mail/alex
:PATH=/usr/lib64/openmpi/bin:/usr/lib64/mpich2/bin:/usr/lib64/ccache:/usr/local/bin:/usr/bin:/bin:/usr/local/sbin:/usr/sbin:/sbin:/home/alex/.local/bin:/home/alex/bin
:MPI_BIN=/usr/lib64/openmpi/bin
:QT_IM_MODULE=xim
:MPI_COMPILER=openmpi-x86_64
:PWD=/home/alex/hackArea/searums-tools/src/videogen/test
:_LMFILES_=/usr/share/Modules/modulefiles/mpich2-x86_64:/etc/modulefiles/openmpi-x86_64
:XMODIFIERS=@im=none
:GNOME_KEYRING_PID=1583
:LANG=en_US.UTF-8
:GDM_LANG=
:MODULEPATH=/usr/share/Modules/modulefiles:/etc/modulefiles
:LOADEDMODULES=mpich2-x86_64:openmpi-x86_64
:GDMSESSION=gnome
:HISTCONTROL=ignoredups
:MPI_SYSCONFIG=/etc/openmpi-x86_64
:SHLVL=2
:HOME=/home/alex
:MPI_SUFFIX=_openmpi
:GNOME_DESKTOP_SESSION_ID=this-is-deprecated
:MPI_MAN=/usr/share/man/openmpi-x86_64
:PYTHONPATH=/usr/lib64/python2.7/site-packages/openmpi:/usr/lib64/python2.7/site-packages/mpich2
:LOGNAME=alex
:CVS_RSH=ssh
:DBUS_SESSION_BUS_ADDRESS=unix:abstract=/tmp/dbus-gg6RrScWyF,guid=99eec2895dccb5e186742a510000007e
:MPI_HOME=/usr/lib64/openmpi
:MPI_FORTRAN_MOD_DIR=/usr/lib64/gfortran/modules/openmpi-x86_64
:MODULESHOME=/usr/share/Modules
:'LESSOPEN=||/usr/bin/lesspipe.sh %s'
:WINDOWPATH=1
:XDG_RUNTIME_DIR=/run/user/alex
:DISPLAY=:0
:G_BROKEN_FILENAMES=1
:XAUTHORITY=/var/run/gdm/auth-for-alex-a8TNQ0/database
:COLORTERM=gnome-terminal
:'module=() {  eval `/usr/bin/modulecmd bash $*`\n}'
:_=/usr/lib64/openmpi/bin/orte-top

event_log:
:2011-06-23-10:32:59> Analyzing crash data
:2011-06-23-10:33:11  Analyzing crash data
:2011-06-23-10:33:23  Analyzing crash data
:2011-06-23-10:33:33  Initializing virtual root
:2011-06-23-10:34:27  Initializing virtual root
:2011-06-23-10:35:31  Initializing virtual root
:2011-06-23-10:36:09  Initializing virtual root
:2011-06-23-10:36:20  Retrace job finished successfully

maps:
:00400000-00405000 r-xp 00000000 fd:01 2505081                            /usr/lib64/openmpi/bin/orte-top
:00604000-00606000 rw-p 00004000 fd:01 2505081                            /usr/lib64/openmpi/bin/orte-top
:01a46000-01a91000 rw-p 00000000 00:00 0                                  [heap]
:3aa4400000-3aa441f000 r-xp 00000000 fd:01 400816                         /lib64/ld-2.14.so
:3aa461e000-3aa461f000 r--p 0001e000 fd:01 400816                         /lib64/ld-2.14.so
:3aa461f000-3aa4620000 rw-p 0001f000 fd:01 400816                         /lib64/ld-2.14.so
:3aa4620000-3aa4621000 rw-p 00000000 00:00 0 
:3aa4800000-3aa48bf000 r-xp 00000000 fd:01 2504445                        /usr/lib64/openmpi/lib/libopen-rte.so.1.0.0
:3aa48bf000-3aa4abf000 ---p 000bf000 fd:01 2504445                        /usr/lib64/openmpi/lib/libopen-rte.so.1.0.0
:3aa4abf000-3aa4ac7000 rw-p 000bf000 fd:01 2504445                        /usr/lib64/openmpi/lib/libopen-rte.so.1.0.0
:3aa4ac7000-3aa4acd000 rw-p 00000000 00:00 0 
:3aa4c00000-3aa4d8f000 r-xp 00000000 fd:01 400817                         /lib64/libc-2.14.so
:3aa4d8f000-3aa4f8e000 ---p 0018f000 fd:01 400817                         /lib64/libc-2.14.so
:3aa4f8e000-3aa4f92000 r--p 0018e000 fd:01 400817                         /lib64/libc-2.14.so
:3aa4f92000-3aa4f93000 rw-p 00192000 fd:01 400817                         /lib64/libc-2.14.so
:3aa4f93000-3aa4f99000 rw-p 00000000 00:00 0 
:3aa5000000-3aa5016000 r-xp 00000000 fd:01 400818                         /lib64/libpthread-2.14.so
:3aa5016000-3aa5215000 ---p 00016000 fd:01 400818                         /lib64/libpthread-2.14.so
:3aa5215000-3aa5216000 r--p 00015000 fd:01 400818                         /lib64/libpthread-2.14.so
:3aa5216000-3aa5217000 rw-p 00016000 fd:01 400818                         /lib64/libpthread-2.14.so
:3aa5217000-3aa521b000 rw-p 00000000 00:00 0 
:3aa5400000-3aa5483000 r-xp 00000000 fd:01 400839                         /lib64/libm-2.14.so
:3aa5483000-3aa5682000 ---p 00083000 fd:01 400839                         /lib64/libm-2.14.so
:3aa5682000-3aa5683000 r--p 00082000 fd:01 400839                         /lib64/libm-2.14.so
:3aa5683000-3aa5684000 rw-p 00083000 fd:01 400839                         /lib64/libm-2.14.so
:3aa5800000-3aa5802000 r-xp 00000000 fd:01 400820                         /lib64/libdl-2.14.so
:3aa5802000-3aa5a02000 ---p 00002000 fd:01 400820                         /lib64/libdl-2.14.so
:3aa5a02000-3aa5a03000 r--p 00002000 fd:01 400820                         /lib64/libdl-2.14.so
:3aa5a03000-3aa5a04000 rw-p 00003000 fd:01 400820                         /lib64/libdl-2.14.so
:3aa6400000-3aa6415000 r-xp 00000000 fd:01 400840                         /lib64/libgcc_s-4.6.0-20110530.so.1
:3aa6415000-3aa6614000 ---p 00015000 fd:01 400840                         /lib64/libgcc_s-4.6.0-20110530.so.1
:3aa6614000-3aa6615000 rw-p 00014000 fd:01 400840                         /lib64/libgcc_s-4.6.0-20110530.so.1
:3ab5c00000-3ab5c16000 r-xp 00000000 fd:01 400855                         /lib64/libnsl-2.14.so
:3ab5c16000-3ab5e15000 ---p 00016000 fd:01 400855                         /lib64/libnsl-2.14.so
:3ab5e15000-3ab5e16000 r--p 00015000 fd:01 400855                         /lib64/libnsl-2.14.so
:3ab5e16000-3ab5e17000 rw-p 00016000 fd:01 400855                         /lib64/libnsl-2.14.so
:3ab5e17000-3ab5e19000 rw-p 00000000 00:00 0 
:3ab8000000-3ab8002000 r-xp 00000000 fd:01 400837                         /lib64/libutil-2.14.so
:3ab8002000-3ab8201000 ---p 00002000 fd:01 400837                         /lib64/libutil-2.14.so
:3ab8201000-3ab8202000 r--p 00001000 fd:01 400837                         /lib64/libutil-2.14.so
:3ab8202000-3ab8203000 rw-p 00002000 fd:01 400837                         /lib64/libutil-2.14.so
:7f8c9c658000-7f8c9c65d000 rw-p 00000000 00:00 0 
:7f8c9c678000-7f8c9c679000 rw-p 00000000 00:00 0 
:7fff7dd58000-7fff7dd79000 rw-p 00000000 00:00 0                          [stack]
:7fff7ddff000-7fff7de00000 r-xp 00000000 00:00 0                          [vdso]
:ffffffffff600000-ffffffffff601000 r-xp 00000000 00:00 0                  [vsyscall]
Comment 1 Alex Chernyakhovsky 2011-06-23 14:41:39 UTC 
Created attachment 506442 [details]
File: backtrace
Comment 2 Doug Ledford 2012-01-20 19:12:31 UTC 
The openmpi program is being updated from 1.5 to 1.5.4.  Please reopen this bug if that update does not resolve this issue.
Comment 3 Fedora Update System 2012-01-20 19:19:31 UTC 
openmpi-1.5.4-3.fc16 has been submitted as an update for Fedora 16.
https://admin.fedoraproject.org/updates/openmpi-1.5.4-3.fc16
Comment 4 Fedora Update System 2012-01-20 19:20:01 UTC 
openmpi-1.5.4-3.fc15 has been submitted as an update for Fedora 15.
https://admin.fedoraproject.org/updates/openmpi-1.5.4-3.fc15
Comment 5 Fedora Update System 2012-01-21 21:50:01 UTC 
Package openmpi-1.5.4-3.fc15:
* should fix your issue,
* was pushed to the Fedora 15 testing repository,
* should be available at your local mirror within two days.
Update it with:
# su -c 'yum update --enablerepo=updates-testing openmpi-1.5.4-3.fc15'
as soon as you are able to.
Please go to the following url:
https://admin.fedoraproject.org/updates/FEDORA-2012-0725/openmpi-1.5.4-3.fc15
then log in and leave karma (feedback).
Comment 6 Fedora Update System 2012-02-01 19:28:27 UTC 
openmpi-1.5.4-3.fc16 has been pushed to the Fedora 16 stable repository.  If problems still persist, please make note of it in this bug report.
Comment 7 Fedora Update System 2012-02-01 19:29:40 UTC 
openmpi-1.5.4-3.fc15 has been pushed to the Fedora 15 stable repository.  If problems still persist, please make note of it in this bug report.