Bug 754272

Summary: [abrt] java-1.7.0-openjdk-1.7.0.1-2.0.2.fc16: __GI_raise: Process /usr/lib/jvm/java-1.7.0-openjdk-1.7.0.1.x86_64/jre/bin/java was killed by signal 6 (SIGABRT)
Product: [Fedora] Fedora Reporter: Clifford Ilkay <cilkay>
Component: eclipseAssignee: Alexander Kurtakov <akurtako>
Status: CLOSED DUPLICATE QA Contact: Fedora Extras Quality Assurance <extras-qa>
Severity: unspecified Docs Contact:
Priority: unspecified    
Version: 16CC: akurtako, dbhole, jvanek, omajid, overholt, rgrunber, sgehwolf, swagiaal
Target Milestone: ---   
Target Release: ---   
Hardware: x86_64   
OS: Unspecified   
Whiteboard: abrt_hash:42a261888746edbfb680a0f4223b0f2ebb93b0bb
Fixed In Version: Doc Type: Bug Fix
Doc Text:
Story Points: ---
Clone Of: Environment:
Last Closed: 2012-03-20 16:06:19 UTC Type: ---
Regression: --- Mount Type: ---
Documentation: --- CRM:
Verified Versions: Category: ---
oVirt Team: --- RHEL 7.3 requirements from Atomic Host:
Cloudforms Team: --- Target Upstream Version:
Attachments:
Description Flags
File: maps
none
File: event_log
none
File: dso_list
none
File: backtrace none

Description Clifford Ilkay 2011-11-15 22:23:34 UTC 
libreport version: 2.0.6
abrt_version:   2.0.4.981
backtrace_rating: 3
cmdline:        /usr/bin/java -Xms128m -Xmx512m -Dorg.eclipse.equinox.p2.reconciler.dropins.directory=/usr/share/eclipse/dropins -Dorg.eclipse.swt.browser.UseWebKitGTK=true -XX:CompileCommand=exclude,org/eclipse/core/internal/dtree/DataTreeNode,forwardDeltaWith -XX:CompileCommand=exclude,org/eclipse/jdt/internal/compiler/lookup/ParameterizedMethodBinding,<init> -XX:CompileCommand=exclude,org/eclipse/cdt/internal/core/dom/parser/cpp/semantics/CPPTemplates,instantiateTemplate -XX:CompileCommand=exclude,org/eclipse/cdt/internal/core/pdom/dom/cpp/PDOMCPPLinkage,addBinding -XX:CompileCommand=exclude,org/python/pydev/editor/codecompletion/revisited/PythonPathHelper,isValidSourceFile -XX:CompileCommand=exclude,org/python/pydev/ui/filetypes/FileTypesPreferencesPage,getDottedValidSourceFiles -XX:MaxPermSize=256m -jar /usr/lib64/eclipse//plugins/org.eclipse.equinox.launcher_1.2.0.v20110502.jar -os linux -ws gtk -arch x86_64 -showsplash -launcher /usr/lib64/eclipse/eclipse -name Eclipse --launcher.library /usr/lib64/eclipse//plugins/org.eclipse.equinox.launcher.gtk.linux.x86_64_1.1.100.v20110505/eclipse_1407.so -startup /usr/lib64/eclipse//plugins/org.eclipse.equinox.launcher_1.2.0.v20110502.jar --launcher.overrideVmargs -exitdata 8e30037 -vm /usr/bin/java -vmargs -Xms128m -Xmx512m -Dorg.eclipse.equinox.p2.reconciler.dropins.directory=/usr/share/eclipse/dropins -Dorg.eclipse.swt.browser.UseWebKitGTK=true -XX:CompileCommand=exclude,org/eclipse/core/internal/dtree/DataTreeNode,forwardDeltaWith -XX:CompileCommand=exclude,org/eclipse/jdt/internal/compiler/lookup/ParameterizedMethodBinding,<init> -XX:CompileCommand=exclude,org/eclipse/cdt/internal/core/dom/parser/cpp/semantics/CPPTemplates,instantiateTemplate -XX:CompileCommand=exclude,org/eclipse/cdt/internal/core/pdom/dom/cpp/PDOMCPPLinkage,addBinding -XX:CompileCommand=exclude,org/python/pydev/editor/codecompletion/revisited/PythonPathHelper,isValidSourceFile -XX:CompileCommand=exclude,org/python/pydev/ui/filetypes/FileTypesPreferencesPage,getDottedValidSourceFiles -XX:MaxPermSize=256m -jar /usr/lib64/eclipse//plugins/org.eclipse.equinox.launcher_1.2.0.v20110502.jar
comment:        I tried to import a Python virtualenv created using virtualenvwrapper. The Django project being managed by Mercurial was a  sub-directory of the virtualenv. Eclipse deleted the virtualenv and then put up a dialog informing me that it could not find the Mercurial project. I then attempted to import just the Django project being managed by Mercurial only to find that the whole virtualenv had been deleted. Thinking this was a bug in PyDev, I went to a shell in which I knew the current working directory had been the Django project in question. "ls -al" confirmed that PyDev had deleted the entire virtualenv. In the meantime, PyDev crashed in the background.
crash_function: __GI_raise
executable:     /usr/lib/jvm/java-1.7.0-openjdk-1.7.0.1.x86_64/jre/bin/java
kernel:         3.1.1-1.fc16.x86_64
reason:         Process /usr/lib/jvm/java-1.7.0-openjdk-1.7.0.1.x86_64/jre/bin/java was killed by signal 6 (SIGABRT)
time:           Tue Nov 15 13:15:42 2011
uid:            1000
username:       cilkay

backtrace:      Text file, 106792 bytes
dso_list:       Text file, 29520 bytes
event_log:      Text file, 22761 bytes
maps:           Text file, 81952 bytes

build_ids:
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:-
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:a518a8b1b5c3e80dee813df05e951d205d6ac48c
:17730a82a5bb819d62b901c3176ec87abc353e68

environ:
:XDG_VTNR=1
:SSH_AGENT_PID=1233
:XDG_SESSION_ID=1
:DM_CONTROL=/var/run/xdmctl
:HOSTNAME=jupiter.tor.dinamis.com
:XDG_MENU_PREFIX=kde4-
:SHELL=/bin/bash
:XDG_SESSION_COOKIE=0e97bc37be91bf56e46c5c8800000006-1321309898.962009-939259433
:XDM_MANAGED=method=classic
:HISTSIZE=1000
:GTK2_RC_FILES=/etc/gtk-2.0/gtkrc:/home/cilkay/.gtkrc-2.0:/home/cilkay/.gtkrc-2.0-kde4:/home/cilkay/.kde/share/config/gtkrc-2.0
:GS_LIB=
:QTDIR=/usr/lib64/qt-3.3
:QTINC=/usr/lib64/qt-3.3/include
:KDE_FULL_SESSION=true
:USER=cilkay
:LS_COLORS=di=01;36:ln=01;37:
:SSH_AUTH_SOCK=/tmp/ssh-ZlfNBYvW1211/agent.1211
:DESKTOP_SESSION=kde-plasma
:PATH=/home/cilkay/bin:/usr/lib64/qt-3.3/bin:/usr/local/bin:/usr/bin:/bin:/usr/games:/usr/local/sbin:/usr/sbin:/sbin
:MAIL=/var/spool/mail/cilkay
:PWD=/home/cilkay
:KDE_SESSION_UID=1000
:LANG=en_US.UTF-8
:KDE_IS_PRELINKED=1
:PYTHONSTARTUP=/home/cilkay/.pythonrc
:KDEDIRS=/usr
:HISTCONTROL=ignoredups
:SSH_ASKPASS=/usr/bin/ksshaskpass
:SHLVL=2
:XDG_SEAT=seat0
:HOME=/home/cilkay
:KDE_SESSION_VERSION=4
:XCURSOR_THEME=Adwaita
:LOGNAME=cilkay
:QTLIB=/usr/lib64/qt-3.3/lib
:XDG_DATA_DIRS=/usr/share/kde-settings/kde-profile/default/share:/usr/local/share:/usr/share
:DBUS_SESSION_BUS_ADDRESS=unix:abstract=/tmp/dbus-ADN3CF6Wmt,guid=e367dbe7ebb96c576780a8e900000019
:'LESSOPEN=||/usr/bin/lesspipe.sh %s'
:WINDOWPATH=1
:XDG_RUNTIME_DIR=/run/user/cilkay
:DISPLAY=:0
:QT_PLUGIN_PATH=/home/cilkay/.kde/lib64/kde4/plugins/:/usr/lib64/kde4/plugins/:/usr/lib/kde4/plugins
:XAUTHORITY=/tmp/kde-cilkay/xauth-1000-_0
:_=/usr/libexec/kde4/start_kdeinit_wrapper
:KDE_MULTIHEAD=false
:SESSION_MANAGER=local/unix:@/tmp/.ICE-unix/1352,unix/unix:/tmp/.ICE-unix/1352
:GTK_RC_FILES=/etc/gtk/gtkrc:/home/cilkay/.gtkrc:/home/cilkay/.kde/share/config/gtkrc
:DESKTOP_STARTUP_ID=jupiter.tor.dinamis.com;1321380144;734711;1365_TIME70269985

smolt_data:
:
:
:General
:=================================
:UUID: 5f563dca-0d58-4357-be36-fa4b6085a871
:OS: Fedora release 16 (Verne)
:Default run level: Unknown
:Language: en_US.UTF-8
:Platform: x86_64
:BogoMIPS: 5349.12
:CPU Vendor: GenuineIntel
:CPU Model: Intel(R) Core(TM) i5 CPU         750  @ 2.67GHz
:CPU Stepping: 5
:CPU Family: 6
:CPU Model Num: 30
:Number of CPUs: 4
:CPU Speed: 2668
:System Memory: 7985
:System Swap: 8095
:Vendor: System manufacturer
:System: System Product Name System Version
:Form factor: Desktop
:Kernel: 3.1.1-1.fc16.x86_64
:SELinux Enabled: 0
:SELinux Policy: targeted
:SELinux Enforce: Unknown
:MythTV Remote: Unknown
:MythTV Role: Unknown
:MythTV Theme: Unknown
:MythTV Plugin: 
:MythTV Tuner: -1
:
:
:Devices
:=================================
:(32902:11434:32902:32902) pci, None, HOST/PCI, Core Processor Integrated Memory Controller Channel 1 Rank Registers
:(32902:11435:32902:32902) pci, None, HOST/PCI, Core Processor Integrated Memory Controller Channel 1 Thermal Control Registers
:(32902:11432:32902:32902) pci, None, HOST/PCI, Core Processor Integrated Memory Controller Channel 1 Control Registers
:(32902:11433:32902:32902) pci, None, HOST/PCI, Core Processor Integrated Memory Controller Channel 1 Address Registers
:(32902:53585:0:0) pci, None, BASE, Core Processor QPI Routing and Protocol Registers
:(32902:53584:0:0) pci, None, BASE, Core Processor QPI Link
:(32902:11425:32902:32902) pci, None, HOST/PCI, Core Processor Integrated Memory Controller Channel 0 Address Registers
:(32902:11424:32902:32902) pci, None, HOST/PCI, Core Processor Integrated Memory Controller Channel 0 Control Registers
:(32902:53553:4163:33667) pci, None, HOST/PCI, Core Processor DMI
:(4358:12356:4163:33278) pci, firewire_ohci, FIREWIRE, M4A series motherboard
:(32902:15152:4163:33667) pci, i801_smbus, SERIAL, 5 Series/3400 Series Chipset SMBus Controller
:(32902:15136:4163:33667) pci, ata_piix, STORAGE, 5 Series/3400 Series Chipset 4 port SATA IDE Controller
:(32902:15106:4163:33667) pci, None, PCI/ISA, 5 Series Chipset LPC Interface Controller
:(32902:15142:4163:33667) pci, ata_piix, STORAGE, 5 Series/3400 Series Chipset 2 port SATA IDE Controller
:(32902:9294:4163:33667) pci, None, PCI/PCI, 82801 PCI Bridge
:(32902:15164:4163:33667) pci, ehci_hcd, USB, 5 Series/3400 Series Chipset USB2 Enhanced Host Controller
:(32902:15156:4163:33667) pci, ehci_hcd, USB, 5 Series/3400 Series Chipset USB2 Enhanced Host Controller
:(4724:4977:4724:4977) pci, snd_ens1371, MULTIMEDIA_AUDIO, Creative Sound Blaster AudioPCI64V, AudioPCI128
:(32902:15180:4163:33667) pci, pcieport, PCI/PCI, 5 Series/3400 Series Chipset PCI Express Root Port 6
:(6523:9059:4163:33359) pci, pata_jmicron, STORAGE, JMB362/JMB363 Serial ATA Controller
:(6523:9059:4163:33359) pci, ahci, STORAGE, JMB362/JMB363 Serial ATA Controller
:(32902:11426:32902:32902) pci, None, HOST/PCI, Core Processor Integrated Memory Controller Channel 0 Rank Registers
:(32902:11427:32902:32902) pci, None, HOST/PCI, Core Processor Integrated Memory Controller Channel 0 Thermal Control Registers
:(32902:15170:4163:33667) pci, pcieport, PCI/PCI, 5 Series/3400 Series Chipset PCI Express Root Port 1
:(32902:15182:4163:33667) pci, pcieport, PCI/PCI, 5 Series/3400 Series Chipset PCI Express Root Port 7
:(32902:53560:4163:33667) pci, pcieport, PCI/PCI, Core Processor PCI Express Root Port 1
:(32902:15178:4163:33667) pci, pcieport, PCI/PCI, 5 Series/3400 Series Chipset PCI Express Root Port 5
:(32902:15184:4163:33667) pci, pcieport, PCI/PCI, 5 Series/3400 Series Chipset PCI Express Root Port 8
:(4318:1570:4163:33532) pci, nvidia, VIDEO, G94 [GeForce 9600 GT]
:(32902:15190:4163:33653) pci, snd_hda_intel, MULTIMEDIA, 5 Series/3400 Series Chipset High Definition Audio
:(32902:53591:67:131) pci, None, BASE, Core Processor System Control and Status Registers
:(32902:53592:0:0) pci, None, BASE, Core Processor Miscellaneous Registers
:(32902:53589:67:131) pci, None, BASE, Core Processor System Management Registers
:(32902:53590:67:131) pci, None, BASE, Core Processor Semaphore and Scratchpad Registers
:(4332:33128:4163:33699) pci, r8169, ETHERNET, M4A785TD Motherboard
:(32902:11393:32902:32902) pci, None, HOST/PCI, Core Processor QuickPath Architecture System Address Decoder
:(32902:11345:32902:32902) pci, None, HOST/PCI, Core Processor QuickPath Architecture Generic Non-Core Registers
:(32902:11420:32902:32902) pci, None, HOST/PCI, Core Processor Integrated Memory Controller Test Registers
:(32902:11416:32902:32902) pci, None, HOST/PCI, Core Processor Integrated Memory Controller
:(32902:11417:32902:32902) pci, None, HOST/PCI, Core Processor Integrated Memory Controller Target Address Decoder
:(32902:11409:32902:32902) pci, None, HOST/PCI, Core Processor QPI Physical 0
:(32902:11408:32902:32902) pci, i7core_edac, HOST/PCI, Core Processor QPI Link 0
:
:
:Filesystem Information
:=================================
:device mtpt type bsize frsize blocks bfree bavail file ffree favail
:-------------------------------------------------------------------
:/dev/sda3 / ext4 4096 4096 7513869 5824402 5748087 1908736 1694450 1694450
:/dev/sda1 /boot ext4 1024 1024 247919 192361 179561 64000 63729 63729
:/dev/mapper/vg_jupiter-home /home ext4 4096 4096 169800152 19228414 10603058 43130880 38139367 38139367
:/dev/mapper/vg_jupiter-var /var ext4 4096 4096 70555064 34001641 30417641 17924096 17732065 17732065
:

var_log_messages:
:Nov 14 17:16:35 jupiter yum[27482]: Updated: tzdata-java-2011n-2.fc16.noarch
:Nov 15 05:37:41 jupiter yum[18068]: Installed: 1:java-1.6.0-openjdk-devel-1.6.0.0-60.1.10.4.fc16.x86_64
:Nov 15 05:37:44 jupiter yum[18068]: Installed: ant-javamail-1.8.2-6.fc16.noarch
:Nov 15 05:38:06 jupiter yum[18068]: Installed: libreadline-java-0.8.0-28.fc15.x86_64
:Nov 15 05:38:07 jupiter yum[18068]: Installed: subversion-javahl-1.6.17-5.fc16.x86_64
:Nov 15 05:38:14 jupiter yum[18068]: Installed: antlr3-java-3.2-14.fc15.noarch
:Nov 15 05:38:15 jupiter yum[18068]: Installed: lpg-java-compat-1.1.0-6.fc15.1.noarch
:Nov 15 05:38:27 jupiter yum[18068]: Installed: 1:mysql-connector-java-5.1.17-1.fc16.1.x86_64
:Nov 15 05:39:06 jupiter yum[18068]: Installed: java-1.5.0-gcj-javadoc-1.5.0.0-37.fc16.x86_64
:Nov 15 05:39:17 jupiter yum[18068]: Installed: eclipse-mylyn-context-java-3.6.0-2.fc16.noarch
:Nov 15 13:15:49 jupiter abrt[22604]: saved core dump of pid 22258 (/usr/lib/jvm/java-1.7.0-openjdk-1.7.0.1.x86_64/jre/bin/java) to /var/spool/abrt/ccpp-2011-11-15-13:15:42-22258 (1865510912 bytes)

xsession_errors:
:Nov 15, 2011 1:02:57 PM java.util.prefs.FileSystemPreferences$1 run
:java.lang.NullPointerException
:	at org.eclipse.core.internal.expressions.Expressions.getArguments(Expressions.java:232)
:	at org.eclipse.core.internal.expressions.TestExpression.<init>(TestExpression.java:68)
:	at org.eclipse.core.internal.expressions.StandardElementHandler.create(StandardElementHandler.java:79)
:	at org.eclipse.core.expressions.ExpressionConverter.perform(ExpressionConverter.java:115)
:	at org.eclipse.core.expressions.ExpressionConverter.processChildren(ExpressionConverter.java:170)
:	at org.eclipse.core.expressions.ElementHandler.processChildren(ElementHandler.java:126)
:	at org.eclipse.core.internal.expressions.StandardElementHandler.create(StandardElementHandler.java:118)
:	at org.eclipse.core.expressions.ExpressionConverter.perform(ExpressionConverter.java:115)
:	at org.eclipse.help.internal.UAElement.getFilterElements(UAElement.java:104)
:	at org.eclipse.help.internal.UAElement.isEnabled(UAElement.java:255)
:	at org.eclipse.help.internal.base.scope.FilterScope.inScope(FilterScope.java:30)
:	at org.eclipse.help.internal.base.scope.ScopeUtils.showInTree(ScopeUtils.java:42)
:	at org.eclipse.help.internal.webapp.data.TopicFinder.isEnabled(TopicFinder.java:330)
:	at org.eclipse.help.internal.webapp.data.TopicFinder.findTocContainingTopic(TopicFinder.java:251)
:	at org.eclipse.help.internal.webapp.data.TopicFinder.<init>(TopicFinder.java:42)
:	at org.eclipse.help.internal.webapp.data.TocData.loadTocs(TocData.java:222)
:	at org.eclipse.help.internal.webapp.data.TocData.<init>(TocData.java:114)
:	at org.eclipse.help.internal.webapp.data.LayoutData.getContentURL(LayoutData.java:120)
:	at org.apache.jsp.advanced.content_jsp._jspService(content_jsp.java:133)
:	at org.apache.jasper.runtime.HttpJspBase.service(HttpJspBase.java:98)
:	at javax.servlet.http.HttpServlet.service(HttpServlet.java:717)
:	at org.apache.jasper.servlet.JspServletWrapper.service(JspServletWrapper.java:369)
:	at org.apache.jasper.servlet.JspServlet.serviceJspFile(JspServlet.java:308)
:	at org.apache.jasper.servlet.JspServlet.service(JspServlet.java:259)
:	at javax.servlet.http.HttpServlet.service(HttpServlet.java:717)
:	at org.eclipse.equinox.jsp.jasper.JspServlet.service(JspServlet.java:153)
:	at javax.servlet.http.HttpServlet.service(HttpServlet.java:717)
:	at org.eclipse.equinox.http.registry.internal.ServletManager$ServletWrapper.service(ServletManager.java:180)
:	at org.eclipse.equinox.http.servlet.internal.ServletRegistration.service(ServletRegistration.java:61)
:	at org.eclipse.equinox.http.servlet.internal.ProxyServlet.processAlias(ProxyServlet.java:126)
:	at org.eclipse.equinox.http.servlet.internal.ProxyServlet.service(ProxyServlet.java:68)
:	at javax.servlet.http.HttpServlet.service(HttpServlet.java:717)
:	at org.eclipse.equinox.http.jetty.internal.HttpServerManager$InternalHttpServiceServlet.service(HttpServerManager.java:317)
:	at org.mortbay.jetty.servlet.ServletHolder.handle(ServletHolder.java:511)
:	at org.mortbay.jetty.servlet.ServletHandler.handle(ServletHandler.java:401)
:	at org.mortbay.jetty.servlet.SessionHandler.handle(SessionHandler.java:182)
:	at org.mortbay.jetty.handler.ContextHandler.handle(ContextHandler.java:766)
:	at org.mortbay.jetty.handler.HandlerWrapper.handle(HandlerWrapper.java:152)
:	at org.mortbay.jetty.Server.handle(Server.java:326)
:	at org.mortbay.jetty.HttpConnection.handleRequest(HttpConnection.java:542)
:	at org.mortbay.jetty.HttpConnection$RequestHandler.headerComplete(HttpConnection.java:928)
:	at org.mortbay.jetty.HttpParser.parseNext(HttpParser.java:549)
:	at org.mortbay.jetty.HttpParser.parseAvailable(HttpParser.java:212)
:	at org.mortbay.jetty.HttpConnection.handle(HttpConnection.java:404)
:	at org.mortbay.io.nio.SelectChannelEndPoint.run(SelectChannelEndPoint.java:410)
:	at org.mortbay.thread.QueuedThreadPool$PoolThread.run(QueuedThreadPool.java:582)
Comment 1 Clifford Ilkay 2011-11-15 22:23:39 UTC 
Created attachment 533854 [details]
File: maps
Comment 2 Clifford Ilkay 2011-11-15 22:23:41 UTC 
Created attachment 533855 [details]
File: event_log
Comment 3 Clifford Ilkay 2011-11-15 22:23:43 UTC 
Created attachment 533856 [details]
File: dso_list
Comment 4 Clifford Ilkay 2011-11-15 22:23:45 UTC 
Created attachment 533857 [details]
File: backtrace
Comment 5 Omair Majid 2011-11-15 22:56:30 UTC 
Crash originated from swt code:
#10 <signal handler called>
No symbol table info available.
#11 0x0000003f86a186d0 in g_object_get_qdata (object=0x7f307de57120, quark=616) at gobject.c:2816
        __inst = 0x7f307de57120
        __r = <optimized out>
        _g_boolean_var_ = <optimized out>
        __PRETTY_FUNCTION__ = "g_object_get_qdata"
#12 0x00007f302384499c in Java_org_eclipse_swt_internal_gtk_OS__1g_1object_1get_1qdata () from /usr/lib64/eclipse/configuration/org.eclipse.osgi/bundles/117/1/.cp/libswt-pi-gtk-3735.so

Reassigning to eclipse.
Comment 6 Alexander Kurtakov 2011-11-16 07:16:18 UTC 
Clifford,
Is this 100% reproducible. I'll need a small testcase allowing me to reproduce this in order to debug the whole issue.
Comment 7 abrt-bot 2012-03-20 16:06:19 UTC 
Backtrace analysis found this bug to be similar to bug #660136, closing as duplicate.

Bugs which were found to be similar to this bug: 
  eclipse: bug #560104, bug #704288
  java-1.6.0-openjdk: bug #562888, bug #569628, bug #611894, bug #622517, bug #637359, bug #655113, bug #660136

This comment is automatically generated.

*** This bug has been marked as a duplicate of bug 660136 ***