| Summary: | [abrt] openmpi-1.5.4-3.fc16: Process /usr/lib/openmpi/bin/orted was killed by signal 11 (SIGSEGV) | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Product: | [Fedora] Fedora | Reporter: | Sergei LITVINENKO <sergei.litvinenko> | ||||||||
| Component: | openmpi | Assignee: | Jay Fenlason <fenlason> | ||||||||
| Status: | CLOSED WONTFIX | QA Contact: | Fedora Extras Quality Assurance <extras-qa> | ||||||||
| Severity: | unspecified | Docs Contact: | |||||||||
| Priority: | unspecified | ||||||||||
| Version: | 16 | CC: | dledford, fenlason, jfeeney | ||||||||
| Target Milestone: | --- | ||||||||||
| Target Release: | --- | ||||||||||
| Hardware: | i686 | ||||||||||
| OS: | Unspecified | ||||||||||
| Whiteboard: | abrt_hash:864d4a3b6d29cfc0f491b826b49f4f297822cd41 | ||||||||||
| Fixed In Version: | Doc Type: | Bug Fix | |||||||||
| Doc Text: | Story Points: | --- | |||||||||
| Clone Of: | Environment: | ||||||||||
| Last Closed: | 2013-02-13 14:25:26 UTC | Type: | --- | ||||||||
| Regression: | --- | Mount Type: | --- | ||||||||
| Documentation: | --- | CRM: | |||||||||
| Verified Versions: | Category: | --- | |||||||||
| oVirt Team: | --- | RHEL 7.3 requirements from Atomic Host: | |||||||||
| Cloudforms Team: | --- | Target Upstream Version: | |||||||||
| Attachments: |
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Created attachment 563979 [details]
File: maps
Created attachment 563980 [details]
File: smolt_data
Created attachment 563981 [details]
File: backtrace
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libreport version: 2.0.8 abrt_version: 2.0.7 backtrace_rating: 4 cmdline: orted --debug -mca ess env -mca orte_ess_jobid 2100559872 -mca orte_ess_vpid 1 -mca orte_ess_num_procs 2 --hnp-uri 2100559872.0;tcp://10.119.100.6:56141 -mca plm rsh crash_function: orte_odls_base_default_construct_child_list executable: /usr/lib/openmpi/bin/orted kernel: 3.2.6-3.fc16.i686.PAE pid: 32296 pwd: /home/sergeil reason: Process /usr/lib/openmpi/bin/orted was killed by signal 11 (SIGSEGV) time: Пт. 17 февр. 2012 22:14:07 uid: 1000 username: sergeil backtrace: Text file, 67192 bytes maps: Text file, 6418 bytes smolt_data: Binary file, 4273 bytes build_ids: :85b11c220dc92b70a4405c3afffc410608ab29f6 :e8e1e23704acbfe4c07b40b4277e792b663cd053 :d7ca3751445b6644328a81f136899751121a2e32 :96b666a7f6d7a80ea6f9aef54f0cdd0f6190c058 :5b853064c3d832d471e71bb67b714a7f69ff11d3 :3aed71a6e79a28101ca36e6e9b3e8e053b73421a :e08267f8f9d16ae8c82160abe37a16dfcd3504da :6e7f601b12a9cbb61564a6f4b3f90d5629b073e2 :62a06c0714dc286b30a2ec185f53e1cedbf800ca :1273fae6d85d3347f08bae98028dafbef65639c3 :d1bd2374eb12ee6116690a80ce23d695b3d585e8 :83f4eb739af4440c5c0c8f8c9c35cee4f2862951 :f8e2e3adf420486889169759ccf806dc393ca12f :8ecf640dfdeffb08819e97ec1bcf9667e2f85e4c :4cd55f94e68f421480f0c88fc5ca3d642fe74aec :f9e2b98a3ed0fc9ff7657ad8f48bfc74a78c0f6d :879571cf1e8dd31736d0f24b55e0daffc1591278 :c28ba54f3bf4e4dcceb579daa3654394d1610fdb :12da4d1dc9764d3990ab6a2def5a88c4687d4550 :a4b20d2b24b6e526c7ec83376fea135ce1586ef9 :6d37684511b1a3694e5acde75d73cc196e629977 :89d04bfbe4b627a756c1c4d82fb47664701f7a86 :d1fa9054db61eabe5e8646f93269d6300bbdba48 :82674b49345364df4c158e8258b93fd4d8fdbae0 :d7cd016536dcce05ea28a1219c92eb9507121fa3 :d94f52f020f5a21d89ce70745a9bfb78cee38ba4 :8163f121b94883addbeb3dc331bfb34338aca566 :b1e761e9a1863a759201e4a2c9211aee03042b31 :10cec21724c13b95ec03f00985b0405412817a49 :b5f249300c57e7c5beb42b37ae04516154dac0ba :9576c7b9f86ee7390a33137a1b745a7d4adc67d8 :e742363bfe59e97f0baaf679ba58b9175b7228dd comment: :Run simple openmpi test: : :==> from centos-6.x : :[sergeil@centos6 ~]$ set | grep openmpi :LD_LIBRARY_PATH=/usr/lib/openmpi/lib:/usr/lib/openmpi/lib/openmpi:/usr/lib/openmpi/bin: :PATH=/usr/lib/qt-3.3/bin:/usr/local/bin:/bin:/usr/bin:/usr/local/sbin:/usr/sbin:/sbin:/usr/lib/openmpi/bin:/home/sergeil/bin : :[sergeil@centos6 ~]$ rpm -qa | grep openmpi :openmpi-1.5.3-3.el6.i686 :openmpi-devel-1.5.3-3.el6.i686 : : :==> to fedora-16 : :[sergeil@homedesk ~]$ set | grep openmpi :LD_LIBRARY_PATH=/usr/lib/openmpi/lib:/usr/lib/openmpi/lib/openmpi:/usr/lib/openmpi/lib: :PATH=/usr/lib/ccache:/usr/local/bin:/usr/bin:/bin:/usr/games:/usr/local/sbin:/usr/sbin:/sbin:/usr/lib/openmpi/bin:/home/sergeil/bin:/usr/lib/openmpi/bin : :[sergeil@homedesk ~]$ rpm -qa | grep openmpi :openmpi-1.5.4-3.fc16.i686 :openmpi-devel-1.5.4-3.fc16.i686 : :[sergeil@centos6 ~]$ mpirun -d -np 2 --host homedesk /bin/hostname :[centos6:02504] procdir: /tmp/openmpi-sessions-sergeil@centos6_0/32052/0/0 :[centos6:02504] jobdir: /tmp/openmpi-sessions-sergeil@centos6_0/32052/0 :[centos6:02504] top: openmpi-sessions-sergeil@centos6_0 :[centos6:02504] tmp: /tmp :[homedesk:32296] procdir: /tmp/openmpi-sessions-sergeil@homedesk_0/32052/0/1 :[homedesk:32296] jobdir: /tmp/openmpi-sessions-sergeil@homedesk_0/32052/0 :[homedesk:32296] top: openmpi-sessions-sergeil@homedesk_0 :[homedesk:32296] tmp: /tmp :[homedesk:32296] [[32052,0],1] node[0].name centos6 daemon 0 :[homedesk:32296] [[32052,0],1] node[1].name homedesk daemon 1 :[homedesk:32296] *** Process received signal *** :[homedesk:32296] Signal: Segmentation fault (11) :[homedesk:32296] Signal code: Address not mapped (1) :[homedesk:32296] Failing at address: 0x9336380 :[homedesk:32296] [ 0] [0xb76e240c] :[homedesk:32296] [ 1] /usr/lib/openmpi/lib/libopen-rte.so.3(orte_odls_base_default_construct_child_list+0x5ea) [0xb765e46a] :[homedesk:32296] [ 2] /usr/lib/openmpi/lib/openmpi/mca_odls_default.so(+0x166b) [0xb73ab66b] :[homedesk:32296] [ 3] /usr/lib/openmpi/lib/libopen-rte.so.3(+0x329c4) [0xb764e9c4] :[homedesk:32296] [ 4] /usr/lib/openmpi/lib/libopen-rte.so.3(orte_daemon_cmd_processor+0x474) [0xb76516d4] :[homedesk:32296] [ 5] /usr/lib/openmpi/lib/libopen-rte.so.3(+0x71fc4) [0xb768dfc4] :[homedesk:32296] [ 6] /usr/lib/openmpi/lib/libopen-rte.so.3(opal_event_loop+0x26) [0xb768e1b6] :[homedesk:32296] [ 7] /usr/lib/openmpi/lib/libopen-rte.so.3(opal_event_dispatch+0x1c) [0xb768e1dc] :[homedesk:32296] [ 8] /usr/lib/openmpi/lib/libopen-rte.so.3(orte_daemon+0xf77) [0xb764d917] :[homedesk:32296] [ 9] orted() [0x8048595] :[homedesk:32296] [10] /lib/libc.so.6(__libc_start_main+0xf3) [0xb73eb6b3] :[homedesk:32296] [11] orted() [0x80485c5] :[homedesk:32296] *** End of error message *** :-------------------------------------------------------------------------- :A daemon (pid 2505) died unexpectedly with status 255 while attempting :to launch so we are aborting. : :There may be more information reported by the environment (see above). : :This may be because the daemon was unable to find all the needed shared :libraries on the remote node. You may set your LD_LIBRARY_PATH to have the :location of the shared libraries on the remote nodes and this will :automatically be forwarded to the remote nodes. :-------------------------------------------------------------------------- :-------------------------------------------------------------------------- :mpirun noticed that the job aborted, but has no info as to the process :that caused that situation. :-------------------------------------------------------------------------- :[centos6:02504] sess_dir_finalize: job session dir not empty - leaving :[centos6:02504] [[32052,0],0] Releasing job data for [32052,0] :[centos6:02504] [[32052,0],0] Releasing job data for [32052,1] :[centos6:02504] sess_dir_finalize: proc session dir not empty - leaving :orterun: exiting with status 255 dso_list: :/usr/lib/openmpi/lib/openmpi/mca_grpcomm_bad.so openmpi-1.5.4-3.fc16.i686 (Fedora Project) 1328205853 :/lib/libpthread-2.14.90.so glibc-2.14.90-24.fc16.4.i686 (Fedora Project) 1325330582 :/usr/lib/openmpi/lib/openmpi/mca_iof_orted.so openmpi-1.5.4-3.fc16.i686 (Fedora Project) 1328205853 :/usr/lib/libhwloc.so.4.0.4 hwloc-1.3-1.fc16.i686 (Fedora Project) 1328205851 :/lib/libutil-2.14.90.so glibc-2.14.90-24.fc16.4.i686 (Fedora Project) 1325330582 :/usr/lib/openmpi/lib/openmpi/mca_carto_auto_detect.so openmpi-1.5.4-3.fc16.i686 (Fedora Project) 1328205853 :/usr/lib/openmpi/lib/openmpi/mca_sysinfo_linux.so openmpi-1.5.4-3.fc16.i686 (Fedora Project) 1328205853 :/lib/ld-2.14.90.so glibc-2.14.90-24.fc16.4.i686 (Fedora Project) 1325330582 :/usr/lib/libltdl.so.7.3.0 libtool-ltdl-2.4-8.fc16.i686 (Fedora Project) 1329419671 :/usr/lib/openmpi/lib/openmpi/mca_routed_binomial.so openmpi-1.5.4-3.fc16.i686 (Fedora Project) 1328205853 :/lib/libnss_files-2.14.90.so glibc-2.14.90-24.fc16.4.i686 (Fedora Project) 1325330582 :/lib/libdl-2.14.90.so glibc-2.14.90-24.fc16.4.i686 (Fedora Project) 1325330582 :/usr/lib/openmpi/lib/openmpi/mca_pstat_linux.so openmpi-1.5.4-3.fc16.i686 (Fedora Project) 1328205853 :/lib/libresolv-2.14.90.so glibc-2.14.90-24.fc16.4.i686 (Fedora Project) 1325330582 :/usr/lib/openmpi/lib/libopen-rte.so.3.0.0 openmpi-1.5.4-3.fc16.i686 (Fedora Project) 1328205853 :/lib/libnsl-2.14.90.so glibc-2.14.90-24.fc16.4.i686 (Fedora Project) 1325330582 :/usr/lib/openmpi/lib/openmpi/mca_plm_rsh.so openmpi-1.5.4-3.fc16.i686 (Fedora Project) 1328205853 :/lib/libz.so.1.2.5 zlib-1.2.5-6.fc16.i686 (Fedora Project) 1326909364 :/lib/libgcc_s-4.6.2-20111027.so.1 libgcc-4.6.2-1.fc16.i686 (Fedora Project) 1321097526 :/usr/lib/openmpi/lib/openmpi/mca_paffinity_hwloc.so openmpi-1.5.4-3.fc16.i686 (Fedora Project) 1328205853 :/lib/libc-2.14.90.so glibc-2.14.90-24.fc16.4.i686 (Fedora Project) 1325330582 :/usr/lib/openmpi/lib/openmpi/mca_oob_tcp.so openmpi-1.5.4-3.fc16.i686 (Fedora Project) 1328205853 :/usr/lib/openmpi/lib/openmpi/mca_ess_env.so openmpi-1.5.4-3.fc16.i686 (Fedora Project) 1328205853 :/usr/lib/openmpi/lib/openmpi/mca_odls_default.so openmpi-1.5.4-3.fc16.i686 (Fedora Project) 1328205853 :/lib/libpci.so.3.1.7 pciutils-libs-3.1.7-6.fc16.i686 (Fedora Project) 1321097624 :/usr/lib/libnuma.so.1 numactl-2.0.7-2.fc16.i686 (Fedora Project) 1321097711 :/usr/lib/openmpi/bin/orted openmpi-1.5.4-3.fc16.i686 (Fedora Project) 1328205853 :/usr/lib/openmpi/lib/openmpi/mca_filem_rsh.so openmpi-1.5.4-3.fc16.i686 (Fedora Project) 1328205853 :/usr/lib/openmpi/lib/openmpi/mca_rml_oob.so openmpi-1.5.4-3.fc16.i686 (Fedora Project) 1328205853 :/lib/libm-2.14.90.so glibc-2.14.90-24.fc16.4.i686 (Fedora Project) 1325330582 :/usr/lib/libxml2.so.2.7.8 libxml2-2.7.8-6.fc16.i686 (Fedora Project) 1321097569 environ: :XDG_SESSION_ID=33 :SELINUX_ROLE_REQUESTED= :SHELL=/bin/bash :'SSH_CLIENT=10.119.100.6 47920 22' :SELINUX_USE_CURRENT_RANGE= :USER=sergeil :LD_LIBRARY_PATH=/usr/lib/openmpi/lib:/usr/lib/openmpi/lib/openmpi: :MAIL=/var/mail/sergeil :PATH=/usr/lib/ccache:/usr/local/bin:/bin:/usr/bin:/usr/lib/openmpi/bin :PWD=/home/sergeil :XMODIFIERS=@im=none :LANG=ru_RU.UTF-8 :MODULEPATH=/usr/share/Modules/modulefiles:/etc/modulefiles :LOADEDMODULES= :KDEDIRS=/usr :SELINUX_LEVEL_REQUESTED= :SSH_ASKPASS=/usr/libexec/openssh/gnome-ssh-askpass :SHLVL=1 :HOME=/home/sergeil :LANGUAGE= :LOGNAME=sergeil :CVS_RSH=ssh :'SSH_CONNECTION=10.119.100.6 47920 10.119.100.100 22' :MODULESHOME=/usr/share/Modules :'LESSOPEN=||/usr/bin/lesspipe.sh %s' :XDG_RUNTIME_DIR=/run/user/sergeil :CCACHE_HASHDIR= :'module=() { eval `/usr/bin/modulecmd bash $*`\n}' :_=/usr/lib/openmpi/bin/orted var_log_messages: :Feb 17 21:59:08 homedesk kernel: [ 9244.904591] orted[31254]: segfault at 99cd240 ip b76ca46a sp bf962450 error 4 in libopen-rte.so.3.0.0[b7688000+ba000] :Feb 17 21:59:08 homedesk abrt[31268]: Saved core dump of pid 31254 (/usr/lib/openmpi/bin/orted) to /var/spool/abrt/ccpp-2012-02-17-21:59:08-31254 (876544 bytes) :Feb 17 21:59:57 homedesk kernel: [ 9293.922359] orted[31330]: segfault at 8f58f78 ip b774246a sp bffd1580 error 4 in libopen-rte.so.3.0.0[b7700000+ba000] :Feb 17 21:59:57 homedesk abrt[31331]: Saved core dump of pid 31330 (/usr/lib/openmpi/bin/orted) to /var/spool/abrt/ccpp-2012-02-17-21:59:57-31330 (876544 bytes) :Feb 17 22:00:12 homedesk kernel: [ 9308.925487] orted[31368]: segfault at 8677240 ip b769546a sp bf97ac60 error 4 in libopen-rte.so.3.0.0[b7653000+ba000] :Feb 17 22:00:12 homedesk abrt[31382]: Not dumping repeating crash in '/usr/lib/openmpi/bin/orted' :Feb 17 22:00:40 homedesk kernel: [ 9336.712256] orted[31407]: segfault at 9cad358 ip b76e846a sp bfbc1f10 error 4 in libopen-rte.so.3.0.0[b76a6000+ba000] :Feb 17 22:00:40 homedesk abrt[31421]: Saved core dump of pid 31407 (/usr/lib/openmpi/bin/orted) to /var/spool/abrt/ccpp-2012-02-17-22:00:40-31407 (876544 bytes) :Feb 17 22:04:02 homedesk kernel: [ 9538.880986] orted[31550]: segfault at 857a358 ip b76f546a sp bfadfdc0 error 4 in libopen-rte.so.3.0.0[b76b3000+ba000] :Feb 17 22:04:02 homedesk abrt[31564]: Saved core dump of pid 31550 (/usr/lib/openmpi/bin/orted) to /var/spool/abrt/ccpp-2012-02-17-22:04:02-31550 (876544 bytes) :Feb 17 22:04:32 homedesk gnome-keyring-daemon[31599]: unsupported key algorithm in certificate: 1.2.840.10045.2.1 :Feb 17 22:04:32 homedesk gnome-keyring-daemon[31599]: unsupported key algorithm in certificate: 1.2.840.10045.2.1 :Feb 17 22:04:32 homedesk gnome-keyring-daemon[31599]: unsupported key algorithm in certificate: 1.2.840.10045.2.1 :Feb 17 22:04:32 homedesk gnome-keyring-daemon[31599]: unsupported key algorithm in certificate: 1.2.840.10045.2.1 :Feb 17 22:04:32 homedesk gnome-keyring-daemon[31599]: unsupported key algorithm in certificate: 1.2.840.10045.2.1 :Feb 17 22:11:48 homedesk kernel: [10005.217518] orted[32104]: segfault at 8908f78 ip b76a546a sp bf889d90 error 4 in libopen-rte.so.3.0.0[b7663000+ba000] :Feb 17 22:11:48 homedesk abrt[32105]: Saved core dump of pid 32104 (/usr/lib/openmpi/bin/orted) to /var/spool/abrt/ccpp-2012-02-17-22:11:48-32104 (876544 bytes) :Feb 17 22:13:33 homedesk kernel: [10110.389053] orted[32241]: segfault at 9967fa0 ip b76ff46a sp bff56a20 error 4 in libopen-rte.so.3.0.0[b76bd000+ba000] :Feb 17 22:13:34 homedesk abrt[32242]: Saved core dump of pid 32241 (/usr/lib/openmpi/bin/orted) to /var/spool/abrt/ccpp-2012-02-17-22:13:33-32241 (876544 bytes) :Feb 17 22:13:50 homedesk kernel: [10126.617901] orted[32288]: segfault at 89b2fa0 ip b771d46a sp bf965140 error 4 in libopen-rte.so.3.0.0[b76db000+ba000] :Feb 17 22:13:50 homedesk abrt[32289]: Not dumping repeating crash in '/usr/lib/openmpi/bin/orted' :Feb 17 22:14:07 homedesk kernel: [10144.267499] orted[32296]: segfault at 9336380 ip b765e46a sp bf8a3c80 error 4 in libopen-rte.so.3.0.0[b761c000+ba000] :Feb 17 22:14:07 homedesk abrt[32310]: Saved core dump of pid 32296 (/usr/lib/openmpi/bin/orted) to /var/spool/abrt/ccpp-2012-02-17-22:14:07-32296 (876544 bytes)