Description of problem: There are two installations: a) - apply the patch and then install JON b) - install JON and then apply the patch md5sums of all libs in rhq agent and jon server dir should be the same for both scenarios but some of them are not the same. Version-Release number of selected component (if applicable): Version : 3.3.0.GA Update 03 Build Number : 82ad0cc:a25836e How reproducible: always Steps to Reproduce: 1. prepare two installations (following scenario a) and b)) 2. compare md5sums of files in rhq-agent and jon-server-3.3.0.GA dirs in first installation with relevant dirs from second installation Actual results: rhq-agent dir: /home/hudson/rhq-agent/lib/rhq-common-drift-4.12.0.JON330GA.jar dc4b45da347dd0c42f5253f739c4924b a9248a6169b42fa4fd56149b1d47f8ce /home/hudson/rhq-agent/lib/rhq-core-client-api-4.12.0.JON330GA.jar 905d40b316df302a7bc891390deb5dab feda0913b0818dc471970a38b10c02d1 /home/hudson/rhq-agent/lib/rhq-core-comm-api-4.12.0.JON330GA.jar 85eaa3bc0ad11f4366975488a06050cb a33a07eca70d28a413b402555ec1c341 /home/hudson/rhq-agent/lib/rhq-core-native-system-4.12.0.JON330GA.jar 235b9456135dd271c6f50b98eb12afc3 f80d8d4df2fd2cc067d0ace31f35bd14 /home/hudson/rhq-agent/lib/rhq-core-plugin-api-4.12.0.JON330GA.jar a28d1462b7247afe6c1966d7e0554913 23658c1b53421c540962549685fa5054 /home/hudson/rhq-agent/lib/rhq-core-util-4.12.0.JON330GA.jar a2c588d95bc7531d7abdcc2c9385943f 50925c28e7180f3693405fb14d32052e jon server dir: /home/hudson/jon-server-3.3.0.GA/rhq-storage/lib/lz4-1.1.0.jar 12943c9a19b4b525d1406bd1b110e811 cf9bd19cd9289d26d6207e261ab9c45f /home/hudson/jon-server-3.3.0.GA/rhq-storage/lib/rhq-cassandra-auth-4.12.0.JON330GA.jar ced7f5440cffb61cf1956db90e92e7ea 15f4e7ac676137d194146a9e5c58b561 I checked differences in some of those libs and it differs only in META-INF/MANIFEST.MF file (e.g. different build time) so the libs are actually the same just with different manifest file.