Spec URL: http://allele5.biol.berkeley.edu/~alex/fedora/wise2.spec SRPM URL: http://allele5.biol.berkeley.edu/~alex/fedora/wise2-2.2.0-1.src.rpm Description: Wise2 is a package focused on comparisons of biopolymers, commonly DNA sequence and protein sequence. A strength of Wise2 is the comparison of DNA sequence at the level of its protein translation. This comparison allows the simultaneous prediction of gene structure with homology based alignment. Parts of the code are licensed under a BSD-style license, the rest is under the GPL making the aggregate work GPL.
+ make CC=gcc all (cd base ; make CC="gcc" CFLAGS="-c -O " libwisebase.a ) make[1]: Entering directory `/users/packman/src/rpms/BUILD/wise2.2.0/src/base' gcc -c -O wiseconfig.c gcc -c -O wisestring.c => package doesn't honour RPM_OPT_FLAGS
* Mon Apr 12 2007 Alex Lancaster <alexl.net> 2.2.0-2 - Pass $RPM_OPT_FLAGS to compiler as per suggestion from Ralf Corsepius. Spec URL: http://allele5.biol.berkeley.edu/~alex/fedora/wise2.spec SRPM URL: http://allele5.biol.berkeley.edu/~alex/fedora/wise2-2.2.0-2.src.rpm + make CC=gcc 'CFLAGS=-c -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i386 -mtune=generic -fasynchronous-unwind-tables' all (cd base ; make CC="gcc" CFLAGS="-c -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m32 -march=i386 -mtune=generic -fasynchronous-unwind-tables" libwisebase.a )
Review: + package builds in mock (development i386). + rpmlint is silent for SRPM and for RPM. + source files match upstream url 0584240f77885e37528e99e64535ab60 wise2.2.0.tar.gz + package meets naming and packaging guidelines. + specfile is properly named, is cleanly written + Spec file is written in American English. + Spec file is legible. + dist tag is present. + build root is correct. + license is open source-compatible. + License text is included in package. + %doc is present. + BuildRequires are proper. + %clean is present. + package installed properly. + Macro use appears rather consistent. + Package contains code, not content. + no headers or static libraries. + no .pc file present. + no -devel subpackage + no .la files. + no translations are available + Does owns the directories it creates. + no scriptlets present. + no duplicates in %files. + file permissions are appropriate. + Provides: config(wise2) = 2.2.0-2.fc7 + Requires: config(wise2) = 2.2.0-2.fc7 libc.so.6 libc.so.6(GLIBC_2.0) libc.so.6(GLIBC_2.1) libc.so.6(GLIBC_2.3) libc.so.6(GLIBC_2.3.4) libc.so.6(GLIBC_2.4) libm.so.6 libm.so.6(GLIBC_2.0) rtld(GNU_HASH) APPROVED.
New Package CVS Request ======================= Package Name: wise2 Short Description: Bioinformatics tools for comparison of biopolymers Owners: alexl.net Branches: FC-5 FC-6 InitialCC:
Builds fine in all branches. Closing.
Package Change Request ====================== Package Name: wise2 New Branches: el6 epel7 Owners: rathann
Git done (by process-git-requests).