Bug 538199 - openmpi-1.3.3-6.fc11.x86_64 Allreduce regression.
Summary: openmpi-1.3.3-6.fc11.x86_64 Allreduce regression.
Keywords:
Status: CLOSED ERRATA
Alias: None
Product: Fedora
Classification: Fedora
Component: openmpi
Version: 11
Hardware: x86_64
OS: Linux
low
medium
Target Milestone: ---
Assignee: Jay Fenlason
QA Contact: Fedora Extras Quality Assurance
URL: https://svn.open-mpi.org/trac/ompi/ti...
Whiteboard:
Depends On:
Blocks:
TreeView+ depends on / blocked
 
Reported: 2009-11-17 21:40 UTC by Erik Zeek
Modified: 2014-08-31 23:29 UTC (History)
5 users (show)

Fixed In Version: 1.4.1-2.fc12
Doc Type: Bug Fix
Doc Text:
Clone Of:
: 555159 (view as bug list)
Environment:
Last Closed: 2010-04-29 18:04:53 UTC
Type: ---
Embargoed:


Attachments (Terms of Use)
Test case using Allreduce (276 bytes, text/x-c++src)
2009-11-17 21:40 UTC, Erik Zeek
no flags Details

Description Erik Zeek 2009-11-17 21:40:59 UTC
Created attachment 369962 [details]
Test case using Allreduce

Description of problem:
Regression using MPI::Allreduce with more than 4 processes.

I'm working an 8 core workstation, and when I run the attached code with more that 4 processes, it hangs.  Generally around iteration 100, but always less than 200.  I have detected no pattern to the number of iterations.

Version-Release number of selected component (if applicable):
openmpi-1.3.3-6.fc11.x86_64 FAILS!
openmpi-1.3.1-1.fc11.x86_64 WORKS!

How reproducible:
Every time.

Steps to Reproduce:
1. Update to openmpi-1.3.3-6.fc11.x86_64
2. make allreduce CXX=mpic++ CXXFLAGS="-O0 -g"
3. mpiexec -n 8 ./allreduce
  
Actual results:
Stops before reaching 99999.

Expected results:
All numbers from 0 to 99999 printed.

Additional info:
I haven't tried other collective functions, so others may fail as well.  I also haven't tried other architectures or running on a true cluster.

Comment 1 mmh 2009-11-20 04:09:03 UTC
Sounds like what I've been seeing on Fedora 11 and 12 (and RHEL 5.4) with openmpi >= 1.3.2.  But it is not just with allreduce. 

These random hangs are easy to reproduce with the Intel MPI benchmarks.

Corresponding openmpi ticket is probably this one
https://svn.open-mpi.org/trac/ompi/ticket/2043

Comment 2 r6144 2010-01-09 10:04:28 UTC
The r22324 patch mentioned in the openmpi ticket seems to fix the problem for me.  Looks like a bug in the use of gcc inline assembly.

Comment 3 Doug Ledford 2010-01-13 18:25:26 UTC
I added the r22324 patch to the openmpi-1.4-1 build.

Comment 4 Fedora Update System 2010-01-14 00:15:37 UTC
openmpi-1.4-1.fc11 has been submitted as an update for Fedora 11.
http://admin.fedoraproject.org/updates/openmpi-1.4-1.fc11

Comment 5 Fedora Update System 2010-01-14 00:15:42 UTC
openmpi-1.4-1.fc12 has been submitted as an update for Fedora 12.
http://admin.fedoraproject.org/updates/openmpi-1.4-1.fc12

Comment 6 Fedora Update System 2010-01-15 21:59:18 UTC
openmpi-1.4-1.fc11 has been pushed to the Fedora 11 testing repository.  If problems still persist, please make note of it in this bug report.
 If you want to test the update, you can install it with 
 su -c 'yum --enablerepo=updates-testing update openmpi'.  You can provide feedback for this update here: http://admin.fedoraproject.org/updates/F11/FEDORA-2010-0544

Comment 7 Fedora Update System 2010-01-15 22:00:10 UTC
openmpi-1.4-1.fc12 has been pushed to the Fedora 12 testing repository.  If problems still persist, please make note of it in this bug report.
 If you want to test the update, you can install it with 
 su -c 'yum --enablerepo=updates-testing update openmpi'.  You can provide feedback for this update here: http://admin.fedoraproject.org/updates/F12/FEDORA-2010-0552

Comment 8 Bug Zapper 2010-04-28 11:22:06 UTC
This message is a reminder that Fedora 11 is nearing its end of life.
Approximately 30 (thirty) days from now Fedora will stop maintaining
and issuing updates for Fedora 11.  It is Fedora's policy to close all
bug reports from releases that are no longer maintained.  At that time
this bug will be closed as WONTFIX if it remains open with a Fedora 
'version' of '11'.

Package Maintainer: If you wish for this bug to remain open because you
plan to fix it in a currently maintained version, simply change the 'version' 
to a later Fedora version prior to Fedora 11's end of life.

Bug Reporter: Thank you for reporting this issue and we are sorry that 
we may not be able to fix it before Fedora 11 is end of life.  If you 
would still like to see this bug fixed and are able to reproduce it 
against a later version of Fedora please change the 'version' of this 
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please add a comment here and someone will do it for you.

Although we aim to fix as many bugs as possible during every release's 
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The process we are following is described here: 
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Comment 9 Erik Zeek 2010-04-29 17:43:58 UTC
The current version (1.4.1-2.fc12) no longer has this bug.  Thanks for updating.

Comment 10 Jay Fenlason 2010-04-29 18:04:53 UTC
Thank you for confirming this is fixed.


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