Bug 769778 - Disks sda, sdb contain BIOS RAID metadata, but are not part of any recognized BIOS RAID sets. Ignoring disks sda, sdb
Summary: Disks sda, sdb contain BIOS RAID metadata, but are not part of any recognized...
Keywords:
Status: CLOSED WONTFIX
Alias: None
Product: Fedora
Classification: Fedora
Component: anaconda
Version: 16
Hardware: x86_64
OS: Linux
unspecified
urgent
Target Milestone: ---
Assignee: Anaconda Maintenance Team
QA Contact: Fedora Extras Quality Assurance
URL:
Whiteboard:
Depends On:
Blocks:
TreeView+ depends on / blocked
 
Reported: 2011-12-22 08:14 UTC by Hayden James
Modified: 2013-02-14 00:53 UTC (History)
4 users (show)

Fixed In Version:
Doc Type: Bug Fix
Doc Text:
Clone Of:
Environment:
Last Closed: 2013-02-14 00:53:28 UTC
Type: ---


Attachments (Terms of Use)
dmesg file (67.65 KB, text/x-log)
2011-12-22 08:14 UTC, Hayden James
no flags Details
lspci output (1.76 KB, text/x-log)
2011-12-22 08:15 UTC, Hayden James
no flags Details
/var/log/messages file (139.56 KB, text/x-log)
2011-12-22 08:21 UTC, Hayden James
no flags Details
FC16 to FC17 preupgrade /tmp/storage.log (91.46 KB, text/x-log)
2012-06-30 01:15 UTC, dan
no flags Details
FC16 to FC17 preupgrade /tmp/anaconda.log (2.16 KB, text/x-log)
2012-06-30 01:15 UTC, dan
no flags Details
FC16 to FC17 preupgrade /tmp/program.log (18.62 KB, text/x-log)
2012-06-30 01:16 UTC, dan
no flags Details
FC16 to FC17 preupgrade /tmp/syslog (100.30 KB, text/plain)
2012-06-30 01:16 UTC, dan
no flags Details

Description Hayden James 2011-12-22 08:14:17 UTC
Created attachment 549140 [details]
dmesg file

Description of problem:

Attempting to upgrade from Fedora 15 to Fedora 16 via preupgrade or booting from USB live disk causes the error message: 

"Disks sda, sdb contain BIOS RAID metadata, but are not part of any recognized BIOS RAID sets. Ignoring disks sda, sdb"

Because of this I am unable to upgrade an existing Fedora installation.

Using the following anaconda version:

[liveuser@hayden-fedora ~]$ rpm -qa | grep anaconda
anaconda-16.25-1.fc16.x86_64
anaconda-yum-plugins-1.0-6.fc15.noarch
[liveuser@hayden-fedora ~]$ 

Currently sda and sdb are setup in a hardware RAID-1 mirroring configuration with a previous installation of Fedora 15 running on there now.


The motherboard is Gigabyte GA-H67MA-UD2H-B3, which appears to have an Intel SATA controller that has the hardware RAID functionality.

00:1f.2 SATA controller: Intel Corporation 6 Series/C200 Series Chipset Family 6 port SATA AHCI Controller (rev 05)

Comment 1 Hayden James 2011-12-22 08:15:50 UTC
Created attachment 549141 [details]
lspci output

Comment 2 Hayden James 2011-12-22 08:21:29 UTC
Created attachment 549143 [details]
/var/log/messages file

This contains some information about the RAID that it appears that anaconda logs.

Comment 3 dan 2012-06-29 18:37:48 UTC
Same issue with preupgrade from FC16 to FC17 as well as Net Install Cd.

If I boot into rescue mode with the FC17 Net Install CD I can access the partitions via:

lvm vgchange -ay

Then mount the resultant dm device under /mnt/sysimage.

Comment 4 David Lehman 2012-06-29 20:35:55 UTC
(In reply to comment #3)
> Same issue with preupgrade from FC16 to FC17 as well as Net Install Cd.
> 
> If I boot into rescue mode with the FC17 Net Install CD I can access the
> partitions via:
> 
> lvm vgchange -ay
> 
> Then mount the resultant dm device under /mnt/sysimage.

That probably means you have old, spurious RAID metadata on your disks. You should remove it using the wipefs utility. See 'man wipefs' for details.

Comment 5 dan 2012-06-29 21:55:54 UTC
Output of wipefs:

[root@ears ~]# wipefs /dev/sda
wipefs: WARNING: /dev/sda: appears to contain 'gpt' partition table
offset               type
----------------------------------------------------------------
0xe8e0db5c00         isw_raid_member   [raid]

[root@ears ~]# wipefs /dev/sdb
wipefs: WARNING: /dev/sdb: appears to contain 'gpt' partition table
offset               type
----------------------------------------------------------------
0xe8e0db5c00         isw_raid_member   [raid]

Output of blkid:

[root@ears ~]# blkid
/dev/md126p3: UUID="b1uCrb-0Jqq-KGiY-TUxL-Tezn-BAOb-TmC3ix" TYPE="LVM2_member" 
/dev/md126p2: UUID="18ab3ab5-ee65-49c2-b92b-e61806d4a775" TYPE="ext4" 
/dev/sda: TYPE="isw_raid_member" 
/dev/sdb: TYPE="isw_raid_member" 
/dev/mapper/vg_ears-lv_swap: UUID="cc9c0678-eba6-4b14-8f00-b30ecc6e0621" TYPE="swap" 
/dev/mapper/vg_ears-lv_root: UUID="e08378fb-c33c-4fd2-b8ed-116b089cb13d" TYPE="ext4" 
/dev/sdc1: LABEL="My Book" UUID="5f772048-d6a4-43ec-9c63-70acb6edf15d" TYPE="xfs" 
/dev/mapper/vg_ears-lv_tmp: UUID="1573db74-b39d-40a6-8575-12146d1313c4" TYPE="ext4" 
/dev/mapper/vg_ears-lv_home: UUID="785a599d-0613-480d-a6b0-673079cd7543" TYPE="ext4" 
/dev/mapper/vg_ears-lv_local: UUID="2c8c96b9-5058-4fbb-89b4-b801f463ce42" TYPE="ext4"

@David -- System is currently running fine under FC16?  Are you suggesting to run wipefs -a?

Comment 6 David Lehman 2012-06-30 00:07:52 UTC
Not if you have an operational array there, no.

How about attaching the following log files (collected from the shell on tty2 right after you see the error during install) so I can see what is happening:

 /tmp/storage.log
 /tmp/anaconda.log
 /tmp/program.log
 /tmp/syslog

Please attach them one at a time, as type text/plain -- no archives. Thanks.

Comment 7 dan 2012-06-30 01:15:13 UTC
Created attachment 595396 [details]
FC16 to FC17 preupgrade /tmp/storage.log

Comment 8 dan 2012-06-30 01:15:51 UTC
Created attachment 595397 [details]
FC16 to FC17 preupgrade /tmp/anaconda.log

Comment 9 dan 2012-06-30 01:16:19 UTC
Created attachment 595398 [details]
FC16 to FC17 preupgrade /tmp/program.log

Comment 10 dan 2012-06-30 01:16:46 UTC
Created attachment 595399 [details]
FC16 to FC17 preupgrade /tmp/syslog

Comment 11 dan 2012-06-30 01:17:33 UTC
@David -- request files have been uploaded.

Comment 12 David Lehman 2012-07-02 14:20:31 UTC
Dan, parted seems to think there is something wrong with the partition table on your raid device. Preupgrade ignores devices that appear unusable. I'd be curious what the output of the following command looks like when run from tty2 in the installer while the error message is on the screen:

  parted /dev/md126 print

Comment 13 dan 2012-07-02 22:51:16 UTC
# parted /dev/md126 print
Error: The backup GPT table is corrupt, but the primary appears OK, so that will
be used.
OK/Cancel? OK                                                             
Model: Linux Software RAID Array (md)
Disk /dev/md126: 1000GB
Sector size (logical/physical): 512B/512B
Partition Table: gpt

Number  Start   End     Size    File system  Name  Flags
 1      1049kB  2097kB  1049kB                     bios_grub
 2      2097kB  526MB   524MB   ext4         ext4  boot
 3      526MB   1000GB  1000GB                     lvm

Comment 14 Fedora End Of Life 2013-01-16 22:20:43 UTC
This message is a reminder that Fedora 16 is nearing its end of life.
Approximately 4 (four) weeks from now Fedora will stop maintaining
and issuing updates for Fedora 16. It is Fedora's policy to close all
bug reports from releases that are no longer maintained. At that time
this bug will be closed as WONTFIX if it remains open with a Fedora 
'version' of '16'.

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Comment 15 Fedora End Of Life 2013-02-14 00:53:33 UTC
Fedora 16 changed to end-of-life (EOL) status on 2013-02-12. Fedora 16 is 
no longer maintained, which means that it will not receive any further 
security or bug fix updates. As a result we are closing this bug.

If you can reproduce this bug against a currently maintained version of 
Fedora please feel free to reopen this bug against that version.

Thank you for reporting this bug and we are sorry it could not be fixed.


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