Created attachment 624603 [details]
upgrade.log

Description of problem:
yum update from an old instance, some packages failed to be installed and return errors.
yum update again, the failed packages are installed successfully


Version-Release number of selected component (if applicable):
On devenv-stage_239

How reproducible:
Always

Steps to Reproduce:
1. Launch an old instance(devenv-stage_239), prepare data on it
2. Modify /etc/yum.repos.d/li.repo, replace 'stage' with 'candidate' in order to upgrade to latest devenv
3. yum -y update| tee -a upgrade.log
  
Actual results:
The following packages failed to be installed:
Failed:
  mod-php-5.3-apache2-zend-server.x86_64 0:5.3.14-5                             
  mod-php-5.3-apache2-zend-server.x86_64 0:5.3.14-7                             
  php-5.3-fcgi-zend-server.x86_64 0:5.3.14-1                                    
  php-5.3-fcgi-zend-server.x86_64 0:5.3.14-3                                    
  php-5.3-imap-zend-server.x86_64 0:5.3.14-1                                    
  php-5.3-imap-zend-server.x86_64 0:5.3.14-3                                    
  php-5.3-ldap-zend-server.x86_64 0:5.3.14-1                                    
  php-5.3-ldap-zend-server.x86_64 0:5.3.14-3                                    
  php-5.3-pdo-mysql-zend-server.x86_64 0:5.3.14-1                               
  php-5.3-pdo-mysql-zend-server.x86_64 0:5.3.14-3                               
  php-5.3-pdo-pgsql-zend-server.x86_64 0:5.3.14-1                               
  php-5.3-pdo-pgsql-zend-server.x86_64 0:5.3.14-3                               
  php-5.3-zip-zend-server.x86_64 0:5.3.14-1                                     
  php-5.3-zip-zend-server.x86_64 0:5.3.14-3                                     
  zend-server-framework2.noarch 0:2.0.2-291 
error messages are like:
Updating   : mod-php-5.3-apache2-zend-server-5.3.14-7.x86_64            1/308
error: unpacking of archive failed on file /usr/local/zend/etc/php.ini;5074fe1b: cpio: open
.....
Fatal error: Uncaught exception 'PDOException' with message 'SQLSTATE[HY000] [14] unable to open database file' in /usr/local/zend/share/scripts/zs_jq_db_handler.php:15
Stack trace:
#0 /usr/local/zend/share/scripts/zs_jq_db_handler.php(15): PDO->__construct('sqlite:/db/jobq...')
#1 /usr/local/zend/share/scripts/zs_create_databases.php(680): JQDBHandler->__construct()
#2 {main}
  thrown in /usr/local/zend/share/scripts/zs_jq_db_handler.php on line 15
X-Powered-By: PHP/5.3.14 ZendServer/5.0^M
Content-type: text/html^M


yum update again and they were installed successfully

Expected results:
Should be installed correctly

Additional info:
I can install the failed packages the second time I run 'yum update', but these packages always failed for the first time of 'yum update'.
So maybe there should be a fix for this?
Full log is attached.