Bug 2448776 (CVE-2026-31968) - CVE-2026-31968 htslib: HTSlib: Buffer overflow in CRAM decoder
Summary: CVE-2026-31968 htslib: HTSlib: Buffer overflow in CRAM decoder
Keywords:
Status: NEW
Alias: CVE-2026-31968
Product: Security Response
Classification: Other
Component: vulnerability
Version: unspecified
Hardware: All
OS: Linux
high
high
Target Milestone: ---
Assignee: Product Security DevOps Team
QA Contact:
URL:
Whiteboard:
Depends On: 2448878 2448874 2448876
Blocks:
TreeView+ depends on / blocked
 
Reported: 2026-03-18 20:02 UTC by OSIDB Bzimport
Modified: 2026-03-18 21:35 UTC (History)
0 users

Fixed In Version:
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Last Closed:
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Description OSIDB Bzimport 2026-03-18 20:02:17 UTC
HTSlib is a library for reading and writing bioinformatics file formats. CRAM is a compressed format which stores DNA sequence alignment data using a variety of encodings and compression methods. For the `VARINT` and `CONST` encodings, incomplete validation of the context in which the encodings were used could result in up to eight bytes being written beyond the end of a heap allocation, or up to eight bytes being written to the location of a one byte variable on the stack, possibly causing the values to adjacent variables to change unexpectedly. Depending on the data stream this could result either in a heap buffer overflow or a stack overflow. If a user opens a file crafted to exploit this issue it could lead to the program crashing, overwriting of data structures on the heap or stack in ways not expected by the program, or changing the control flow of the program. It may be possible to use this to obtain arbitrary code execution. Versions 1.23.1, 1.22.2 and 1.21.1 include fixes for this issue. There is no workaround for this issue.


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