Bug 1108103
| Summary: | FTBFS: several unit tests fail on ppc64 | ||||||
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| Product: | [Fedora] Fedora | Reporter: | Karsten Hopp <karsten> | ||||
| Component: | openbabel | Assignee: | Dominik 'Rathann' Mierzejewski <dominik> | ||||
| Status: | CLOSED ERRATA | QA Contact: | Fedora Extras Quality Assurance <extras-qa> | ||||
| Severity: | high | Docs Contact: | |||||
| Priority: | medium | ||||||
| Version: | rawhide | CC: | dominik, itamar, mjuszkie, normand, paul, susi.lehtola | ||||
| Target Milestone: | --- | ||||||
| Target Release: | --- | ||||||
| Hardware: | ppc64 | ||||||
| OS: | Linux | ||||||
| Whiteboard: | |||||||
| Fixed In Version: | openbabel-2.3.2-11.fc21 | Doc Type: | Bug Fix | ||||
| Doc Text: | Story Points: | --- | |||||
| Clone Of: | Environment: | ||||||
| Last Closed: | 2015-02-23 08:03:29 UTC | Type: | Bug | ||||
| Regression: | --- | Mount Type: | --- | ||||
| Documentation: | --- | CRM: | |||||
| Verified Versions: | Category: | --- | |||||
| oVirt Team: | --- | RHEL 7.3 requirements from Atomic Host: | |||||
| Cloudforms Team: | --- | Target Upstream Version: | |||||
| Embargoed: | |||||||
| Bug Depends On: | |||||||
| Bug Blocks: | 1071880 | ||||||
| Attachments: |
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this bug 1108103 (on rawhide) seems to be a duplicate of 1094513 (epel7) I do not know if we really want to set as duplicate. rotor_test fails with /builddir/build/BUILD/openbabel-2.3.2/test/rotortest.cpp:126: IsNear(RAD_TO_DEG * rotor.CalcTorsion(mol->GetCoordinates()), 180.0, 1.0) (FAIL) RAD_TO_DEG * rotor.CalcTorsion(mol->GetCoordinates()) is -179.974 on ppc64 which hints at a sign error somewhere. To me it just looks like the test is broken. -179.974 degrees is equivalent to 180.026 degrees, which is within the given tolerance (which is presumably 1.0 degrees). https://sourceforge.net/p/openbabel/bugs/927/ was filed for AArch64 #1094513 is same bug Created attachment 984583 [details]
patch + spec changeset
This patch merges arm and ppc64/s390 patches which disable failing tests and then enables it also for aarch64.
Thanks, Marcin. Fix applied to rawhide and built. openbabel-2.3.2-11.fc21 has been submitted as an update for Fedora 21. https://admin.fedoraproject.org/updates/openbabel-2.3.2-11.fc21 Package openbabel-2.3.2-11.fc21: * should fix your issue, * was pushed to the Fedora 21 testing repository, * should be available at your local mirror within two days. Update it with: # su -c 'yum update --enablerepo=updates-testing openbabel-2.3.2-11.fc21' as soon as you are able to. Please go to the following url: https://admin.fedoraproject.org/updates/FEDORA-2015-1735/openbabel-2.3.2-11.fc21 then log in and leave karma (feedback). openbabel-2.3.2-11.fc21 has been pushed to the Fedora 21 stable repository. If problems still persist, please make note of it in this bug report. |
Description of problem: 10/60 Test #10: rotor_Test .......................***Failed Error regular expression found in output. Regex=[FAIL] 0.10 sec /builddir/build/BUILD/openbabel-2.3.2/test/rotortest.cpp:123: IsNear(RAD_TO_DEG * rotor.CalcTorsion(mol->GetCoordinates()), 180.0, 1.0) (FAIL) Start 23: inchiSteffen_PubChem.smi_Test 23/60 Test #23: inchiSteffen_PubChem.smi_Test ....***Timeout 1500.01 sec ============================== *** Open Babel Warning in InChI code #8 :Salt was disconnected; ============================== *** Open Babel Warning in InChI code #30 :Salt was disconnected; Start 54: pytest_sym 54/60 Test #54: pytest_sym .......................***Timeout 1500.03 sec /builddir/build/BUILD/openbabel-2.3.2/scripts/python:/builddir/build/BUILD/openbabel-2.3.2/lib64 95% tests passed, 3 tests failed out of 60 Total Test time (real) = 3065.64 sec The following tests FAILED: 10 - rotor_Test (Failed) 23 - inchiSteffen_PubChem.smi_Test (Timeout) 54 - pytest_sym (Timeout) Errors while running CTest make: *** [test] Error 8 Version-Release number of selected component (if applicable): openbabel-2.3.2-4.fc21 How reproducible: always Steps to Reproduce: 1. ppc-koji build --scratch f21 openbabel-2.3.2-4.fc21.src.rpm 2. 3. Actual results: http://ppc.koji.fedoraproject.org/koji/taskinfo?taskID=1883226 Expected results: Additional info: