Bug 2154807

Summary:	python3-biopython should require python3-mysqlclient instead of python3-mysql
Product:	[Fedora] Fedora	Reporter:	Edgar Hoch <edgar.hoch>
Component:	python-biopython	Assignee:	Luis Bazan <bazanluis20>
Status:	CLOSED ERRATA	QA Contact:	Fedora Extras Quality Assurance <extras-qa>
Severity:	medium	Docs Contact:
Priority:	unspecified
Version:	37	CC:	alex, bazanluis20, dominik, jaruga, neuro-sig, quantum.analyst, trpost
Target Milestone:	---
Target Release:	---
Hardware:	All
OS:	Linux
Whiteboard:
Fixed In Version:	python-biopython-1.81-1.fc37 python-biopython-1.81-1.fc36	Doc Type:	If docs needed, set a value
Doc Text:		Story Points:	---
Clone Of:		Environment:
Last Closed:	2023-02-22 10:11:26 UTC	Type:	Bug
Regression:	---	Mount Type:	---
Documentation:	---	CRM:
Verified Versions:		Category:	---
oVirt Team:	---	RHEL 7.3 requirements from Atomic Host:
Cloudforms Team:	---	Target Upstream Version:
Embargoed:

Description Edgar Hoch 2022-12-19 10:19:54 UTC

Description of problem:
Packages python3-mysql and python3-mysqlclient conflict with each other,
so python3-mysql will be retired.

Please rebuild python3-biopython so that it requires python3-mysqlclient instead of python3-mysql.

Please see bug 1929101 for more information.

Version-Release number of selected component (if applicable):
python3-biopython-1.79-4.fc37

How reproducible:
Always

Comment 1 Elliott Sales de Andrade 2022-12-19 10:29:04 UTC

See also https://src.fedoraproject.org/rpms/python-biopython/pull-request/3

Comment 2 Fedora Update System 2023-02-14 17:50:22 UTC

FEDORA-2023-2b7e8799a8 has been submitted as an update to Fedora 37. https://bodhi.fedoraproject.org/updates/FEDORA-2023-2b7e8799a8

Comment 3 Fedora Update System 2023-02-14 17:50:24 UTC

FEDORA-2023-2d1df80c25 has been submitted as an update to Fedora 36. https://bodhi.fedoraproject.org/updates/FEDORA-2023-2d1df80c25

Comment 4 Fedora Update System 2023-02-15 01:34:52 UTC

FEDORA-2023-2b7e8799a8 has been pushed to the Fedora 37 testing repository.
Soon you'll be able to install the update with the following command:
`sudo dnf upgrade --enablerepo=updates-testing --refresh --advisory=FEDORA-2023-2b7e8799a8`
You can provide feedback for this update here: https://bodhi.fedoraproject.org/updates/FEDORA-2023-2b7e8799a8

See also https://fedoraproject.org/wiki/QA:Updates_Testing for more information on how to test updates.

Comment 5 Fedora Update System 2023-02-15 02:26:48 UTC

FEDORA-2023-2d1df80c25 has been pushed to the Fedora 36 testing repository.
Soon you'll be able to install the update with the following command:
`sudo dnf upgrade --enablerepo=updates-testing --refresh --advisory=FEDORA-2023-2d1df80c25`
You can provide feedback for this update here: https://bodhi.fedoraproject.org/updates/FEDORA-2023-2d1df80c25

See also https://fedoraproject.org/wiki/QA:Updates_Testing for more information on how to test updates.

Comment 6 Fedora Update System 2023-02-22 10:11:26 UTC

FEDORA-2023-2b7e8799a8 has been pushed to the Fedora 37 stable repository.
If problem still persists, please make note of it in this bug report.

Comment 7 Fedora Update System 2023-02-22 11:07:09 UTC

FEDORA-2023-2d1df80c25 has been pushed to the Fedora 36 stable repository.
If problem still persists, please make note of it in this bug report.