Bug 2154807 - python3-biopython should require python3-mysqlclient instead of python3-mysql
Summary: python3-biopython should require python3-mysqlclient instead of python3-mysql
Keywords:
Status: CLOSED ERRATA
Alias: None
Product: Fedora
Classification: Fedora
Component: python-biopython
Version: 37
Hardware: All
OS: Linux
unspecified
medium
Target Milestone: ---
Assignee: Luis Bazan
QA Contact: Fedora Extras Quality Assurance
URL:
Whiteboard:
Depends On:
Blocks:
TreeView+ depends on / blocked
 
Reported: 2022-12-19 10:19 UTC by Edgar Hoch
Modified: 2023-02-22 11:07 UTC (History)
7 users (show)

Fixed In Version: python-biopython-1.81-1.fc37 python-biopython-1.81-1.fc36
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Clone Of:
Environment:
Last Closed: 2023-02-22 10:11:26 UTC
Type: Bug
Embargoed:


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Links
System ID Private Priority Status Summary Last Updated
Red Hat Bugzilla 1929101 0 unspecified MODIFIED Retire "python-mysql" package in favor of "python-mysqlclient" PyPI package 2024-02-15 22:53:46 UTC

Description Edgar Hoch 2022-12-19 10:19:54 UTC
Description of problem:
Packages python3-mysql and python3-mysqlclient conflict with each other,
so python3-mysql will be retired.

Please rebuild python3-biopython so that it requires python3-mysqlclient instead of python3-mysql.

Please see bug 1929101 for more information.

Version-Release number of selected component (if applicable):
python3-biopython-1.79-4.fc37

How reproducible:
Always

Comment 1 Elliott Sales de Andrade 2022-12-19 10:29:04 UTC
See also https://src.fedoraproject.org/rpms/python-biopython/pull-request/3

Comment 2 Fedora Update System 2023-02-14 17:50:22 UTC
FEDORA-2023-2b7e8799a8 has been submitted as an update to Fedora 37. https://bodhi.fedoraproject.org/updates/FEDORA-2023-2b7e8799a8

Comment 3 Fedora Update System 2023-02-14 17:50:24 UTC
FEDORA-2023-2d1df80c25 has been submitted as an update to Fedora 36. https://bodhi.fedoraproject.org/updates/FEDORA-2023-2d1df80c25

Comment 4 Fedora Update System 2023-02-15 01:34:52 UTC
FEDORA-2023-2b7e8799a8 has been pushed to the Fedora 37 testing repository.
Soon you'll be able to install the update with the following command:
`sudo dnf upgrade --enablerepo=updates-testing --refresh --advisory=FEDORA-2023-2b7e8799a8`
You can provide feedback for this update here: https://bodhi.fedoraproject.org/updates/FEDORA-2023-2b7e8799a8

See also https://fedoraproject.org/wiki/QA:Updates_Testing for more information on how to test updates.

Comment 5 Fedora Update System 2023-02-15 02:26:48 UTC
FEDORA-2023-2d1df80c25 has been pushed to the Fedora 36 testing repository.
Soon you'll be able to install the update with the following command:
`sudo dnf upgrade --enablerepo=updates-testing --refresh --advisory=FEDORA-2023-2d1df80c25`
You can provide feedback for this update here: https://bodhi.fedoraproject.org/updates/FEDORA-2023-2d1df80c25

See also https://fedoraproject.org/wiki/QA:Updates_Testing for more information on how to test updates.

Comment 6 Fedora Update System 2023-02-22 10:11:26 UTC
FEDORA-2023-2b7e8799a8 has been pushed to the Fedora 37 stable repository.
If problem still persists, please make note of it in this bug report.

Comment 7 Fedora Update System 2023-02-22 11:07:09 UTC
FEDORA-2023-2d1df80c25 has been pushed to the Fedora 36 stable repository.
If problem still persists, please make note of it in this bug report.


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