Bug 2332189

Summary:	F42FailsToInstall: python3-bioframe
Product:	[Fedora] Fedora	Reporter:	Fedora Fails To Install <fti-bugs>
Component:	python-bioframe	Assignee:	Sandro <gui1ty>
Status:	CLOSED ERRATA	QA Contact:
Severity:	unspecified	Docs Contact:
Priority:	unspecified
Version:	rawhide	CC:	gui1ty, neuro-sig, quantum.analyst
Target Milestone:	---
Target Release:	---
Hardware:	Unspecified
OS:	Unspecified
Whiteboard:
Fixed In Version:	python-bioframe-0.7.2-4.fc42	Doc Type:	If docs needed, set a value
Doc Text:		Story Points:	---
Clone Of:		Environment:
Last Closed:	2024-12-20 00:46:50 UTC	Type:	---
Regression:	---	Mount Type:	---
Documentation:	---	CRM:
Verified Versions:		Category:	---
oVirt Team:	---	RHEL 7.3 requirements from Atomic Host:
Cloudforms Team:	---	Target Upstream Version:
Embargoed:
Bug Depends On:
Bug Blocks:	2300529, 2332159

Description Fedora Fails To Install 2024-12-12 22:25:52 UTC

Hello,

Please note that this comment was generated automatically by https://pagure.io/releng/blob/main/f/scripts/ftbfs-fti/follow-policy.py
If you feel that this output has mistakes, please open an issue at https://pagure.io/releng/

Your package (python-bioframe) Fails To Install in Fedora 42:

can't install python3-bioframe:
  - nothing provides (python3.13dist(numpy) < 2~~ with python3.13dist(numpy) >= 1.10) needed by python3-bioframe-0.7.2-3.fc41.noarch
  
If you know about this problem and are planning on fixing it, please acknowledge so by setting the bug status to ASSIGNED. If you don't have time to maintain this package, consider orphaning it, so maintainers of dependent packages realize the problem.


If you don't react accordingly to the policy for FTBFS/FTI bugs (https://docs.fedoraproject.org/en-US/fesco/Fails_to_build_from_source_Fails_to_install/), your package may be orphaned in 8+ weeks.


P.S. The data was generated solely from koji buildroot, so it might be newer than the latest compose or the content on mirrors. To reproduce, use the koji/local repo only, e.g. in mock:

    $ mock -r fedora-42-x86_64 --config-opts mirrored=False install python3-bioframe


P.P.S. If this bug has been reported in the middle of upgrading multiple dependent packages, please consider using side tags: https://docs.fedoraproject.org/en-US/fesco/Updates_Policy/#updating-inter-dependent-packages

Thanks!

Comment 1 Sandro 2024-12-13 08:57:07 UTC

With the version pinning removed it fails on pandas. Since upstream has already merged changes allowing for NumPy 2.x, this could either be resolved with a temporary patch or with the next update. We'll see.

Comment 2 Fedora Update System 2024-12-20 00:42:02 UTC

FEDORA-2024-9e74ada73a (python-bioframe-0.7.2-4.fc42) has been submitted as an update to Fedora 42.
https://bodhi.fedoraproject.org/updates/FEDORA-2024-9e74ada73a

Comment 3 Fedora Update System 2024-12-20 00:46:50 UTC

FEDORA-2024-9e74ada73a (python-bioframe-0.7.2-4.fc42) has been pushed to the Fedora 42 stable repository.
If problem still persists, please make note of it in this bug report.