Bug 2332192

Summary:	F42FailsToInstall: python3-libNeuroML
Product:	[Fedora] Fedora	Reporter:	Fedora Fails To Install <fti-bugs>
Component:	python-libNeuroML	Assignee:	Ankur Sinha (FranciscoD) <sanjay.ankur>
Status:	CLOSED RAWHIDE	QA Contact:	Fedora Extras Quality Assurance <extras-qa>
Severity:	unspecified	Docs Contact:
Priority:	unspecified
Version:	rawhide	CC:	gui1ty, neuro-sig, sanjay.ankur
Target Milestone:	---
Target Release:	---
Hardware:	Unspecified
OS:	Unspecified
Whiteboard:
Fixed In Version:		Doc Type:	If docs needed, set a value
Doc Text:		Story Points:	---
Clone Of:		Environment:
Last Closed:	2024-12-19 23:56:55 UTC	Type:	---
Regression:	---	Mount Type:	---
Documentation:	---	CRM:
Verified Versions:		Category:	---
oVirt Team:	---	RHEL 7.3 requirements from Atomic Host:
Cloudforms Team:	---	Target Upstream Version:
Embargoed:
Bug Depends On:
Bug Blocks:	2300529, 2332159

Description Fedora Fails To Install 2024-12-12 22:25:57 UTC

Hello,

Please note that this comment was generated automatically by https://pagure.io/releng/blob/main/f/scripts/ftbfs-fti/follow-policy.py
If you feel that this output has mistakes, please open an issue at https://pagure.io/releng/

Your package (python-libNeuroML) Fails To Install in Fedora 42:

can't install python3-libNeuroML:
  - nothing provides python3.13dist(numpy) < 2~~ needed by python3-libNeuroML-0.6.5-1.fc42.noarch
  
If you know about this problem and are planning on fixing it, please acknowledge so by setting the bug status to ASSIGNED. If you don't have time to maintain this package, consider orphaning it, so maintainers of dependent packages realize the problem.


If you don't react accordingly to the policy for FTBFS/FTI bugs (https://docs.fedoraproject.org/en-US/fesco/Fails_to_build_from_source_Fails_to_install/), your package may be orphaned in 8+ weeks.


P.S. The data was generated solely from koji buildroot, so it might be newer than the latest compose or the content on mirrors. To reproduce, use the koji/local repo only, e.g. in mock:

    $ mock -r fedora-42-x86_64 --config-opts mirrored=False install python3-libNeuroML


P.P.S. If this bug has been reported in the middle of upgrading multiple dependent packages, please consider using side tags: https://docs.fedoraproject.org/en-US/fesco/Updates_Policy/#updating-inter-dependent-packages

Thanks!

Comment 1 Sandro 2024-12-13 11:23:27 UTC

Building with NumPy 2.x various tests are failing with:

neuroml/writers.py:241: in write
    import tables
/usr/lib64/python3.13/site-packages/tables/__init__.py:51: in <module>
    from .utilsextension import get_hdf5_version as _get_hdf5_version
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 

>   ???
E   ValueError: numpy.dtype size changed, may indicate binary incompatibility. Expected 96 from C header, got 88 from PyObject

This will be resolved once python-tables has been rebuilt against NumPy 2.x.