Bug 746452

Summary: [abrt] chemtool-1.6.12-3.fc15: __strlen_sse2_pminub: Process /usr/bin/chemtool was killed by signal 11 (SIGSEGV)
Product: [Fedora] Fedora Reporter: Mukundan Ragavan <nonamedotc>
Component: chemtoolAssignee: Dominik 'Rathann' Mierzejewski <dominik>
Status: CLOSED ERRATA QA Contact: Fedora Extras Quality Assurance <extras-qa>
Severity: unspecified Docs Contact:
Priority: unspecified    
Version: 16CC: dominik, itamar, paul
Target Milestone: ---   
Target Release: ---   
Hardware: x86_64   
OS: Unspecified   
Whiteboard: abrt_hash:b8027b4df2bad92a189e34723a913ceacda8b36d
Fixed In Version: chemtool-1.6.13-1.fc16 Doc Type: Bug Fix
Doc Text:
Story Points: ---
Clone Of: Environment:
Last Closed: 2012-05-01 00:49:55 UTC Type: ---
Regression: --- Mount Type: ---
Documentation: --- CRM:
Verified Versions: Category: ---
oVirt Team: --- RHEL 7.3 requirements from Atomic Host:
Cloudforms Team: --- Target Upstream Version:
Attachments:
Description Flags
File: maps
none
File: backtrace none

Description Mukundan Ragavan 2011-10-16 04:42:00 UTC 
libreport version: 2.0.6
abrt_version:   2.0.4.981
backtrace_rating: 4
cmdline:        chemtool
comment:        The program did not even open.
crash_function: __strlen_sse2_pminub
executable:     /usr/bin/chemtool
kernel:         3.1.0-0.rc9.git0.0.fc16.x86_64
reason:         Process /usr/bin/chemtool was killed by signal 11 (SIGSEGV)
time:           Sat Oct 15 23:38:32 2011
uid:            1000
username:       mukundan
xsession_errors: 

backtrace:      Text file, 22183 bytes
maps:           Text file, 31392 bytes

build_ids:
:37d977659123fa04606aa35cba63f9491cc75bbf
:21d5dd609a26d6a87b7e3929b848f45275d5218f
:1c6a95451ee19617be5abea3d121f0226d21ddda
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:f47fce6e45fa4fdaf051267eaa7ed685f4f9125e
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:7110c8ac5ea9a650cbf77c51e8cc1df7c407fafd
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:ade18096383e7368e09a51173028697bd3d21409
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:8b0f0f32d4400b2bf7632c55f013226297f44d17
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:51a78844d8347cde69a77178e4796311a98c6250
:15c25336f081a938b4c7bdc13478f620c614242d
:aaf62304b0fc10611d35b4f56005479d4c58868d
:c8a4e40c84c2f52e78c64d31efc0191c565a9049
:8acc43df965b3c0a70dcfad11c0ade056bdb055b
:400444fb368f79b54959b083f449a1497bf71c13
:163b323da65b708418226eb5fa8b057c731d1475
:6ecc3efaedf849a17c30a67fe15b4dacca1bd981
:0911ea7c180d733724f89037b8e8a34e64024aec
:34bd5893efcbdb4aef1e64ba0c912c86cc243312
:d11228282c7309963f0cc10f69ed07a840db7305
:48aea888319e1848137073c9cbde54a4c2a731c9
:ac469ef8be8e051a6665ca1b877a502f662d704a
:50492c72a5263fc55e154f6d993d41ccba48a16a
:ed91e7cbb6d7056226b7d9d50fff88e24dd5eaac
:7732d5c5ab24c8aa4ef2419ceb092be3cadf55eb
:4c842320387ff7f6f91b7842b223c16518be909f
:9fab6ce4aadf214c28a8ef7dcc06d668ead29696
:7994f114cf7189e482f2665fae8e351ed8bc05e3
:aabfae52f2f9cd3da2a88327b8021a05bc700500
:be507c791e34415e8f42f0e6030c889b2895cf9a
:07470201df55a5254027d05fa4dc509b10f2986a
:f63f0b61d3a9c0237931a9a24d0231ddbba0f481
:ca27a6b6fb616286974e17b579ca91a11ac95e69
:91689252818532ec13597b6528d38be93b2706c4
:3dd00a31cf09e7d59a58bbcf0750e12401a23e53
:4dc09331b4746cec347d4c3a15986aac8969517f
:e982a67c98e50c7c68039aec0859bc4dfc896270
:2e3ec6556580c9793e701a118ac9d879eb8b9b94
:ed6642816767576d8792b5f7f7d2b214ade01db5
:23b6792e3218744316fd495002f40a037c2e0095
:c2d49d72ec1a1e68b39c3724693f83f44d80a259
:4a0257e5af573652a515aab64c6723fc406bcda1
:f1ed2e993eada8d974044e16902b843651e918b4
:ca7e3fb7a2079bbf6b85da9e7ee951fc346b8424
:d440afe7396b3365dcb935f9bf7f2fb28f3839de
:91cb8387ae46b35a79beaaf3031107625121e732
:d210ac3e31d441164b11c558c7c641799394e1d7
:5cb5f8da286abd58aeab3bd6676e661d52ec2b5d
:b0a2d0b4c09d819887ec7d711c8cf3977a074c4f
:a518a8b1b5c3e80dee813df05e951d205d6ac48c
:5eae692ea3275893256b042da687993e45ec278b
:9afa4a71f0f6a189e8dcf1179b9445a81df0ab28

dso_list:
:/lib64/libm-2.14.90.so glibc-2.14.90-12.x86_64 (Fedora Project) 1318702693
:/lib64/libfreebl3.so nss-softokn-freebl-3.12.10-6.fc16.x86_64 (Fedora Project) 1318702696
:/lib64/libgio-2.0.so.0.3000.0 glib2-2.30.0-2.fc16.x86_64 (Fedora Project) 1318679581
:/usr/lib64/libgdk-x11-2.0.so.0.2400.6 gtk2-2.24.6-1.fc16.x86_64 (Fedora Project) 1318680355
:/usr/lib64/libvorbis.so.0.4.5 libvorbis-1:1.3.2-1.fc15.x86_64 (Fedora Project) 1318679592
:/lib64/libz.so.1.2.5 zlib-1.2.5-4.fc16.x86_64 (Fedora Project) 1318679565
:/usr/lib64/libXdamage.so.1.1.0 libXdamage-1.1.3-2.fc15.x86_64 (Fedora Project) 1318680348
:/usr/lib64/libpng12.so.0.46.0 libpng-2:1.2.46-1.fc16.x86_64 (Fedora Project) 1318679566
:/usr/lib64/libatk-1.0.so.0.20209.1 atk-2.2.0-1.fc16.x86_64 (Fedora Project) 1318679583
:/usr/lib64/libcanberra-gtk.so.0.1.8 libcanberra-gtk2-0.28-3.fc16.x86_64 (Fedora Project) 1318681689
:/lib64/ld-2.14.90.so glibc-2.14.90-12.x86_64 (Fedora Project) 1318702693
:/usr/lib64/libXext.so.6.4.0 libXext-1.2.0-2.fc15.x86_64 (Fedora Project) 1318680347
:/usr/lib64/libgtk-x11-2.0.so.0.2400.6 gtk2-2.24.6-1.fc16.x86_64 (Fedora Project) 1318680355
:/lib64/libgthread-2.0.so.0.3000.0 glib2-2.30.0-2.fc16.x86_64 (Fedora Project) 1318679581
:/usr/lib/locale/locale-archive glibc-common-2.14.90-12.x86_64 (Fedora Project) 1318702683
:/usr/lib64/libXcursor.so.1.0.2 libXcursor-1.1.11-3.fc15.x86_64 (Fedora Project) 1318680353
:/usr/lib64/libxcb.so.1.1.0 libxcb-1.7-3.fc16.x86_64 (Fedora Project) 1318679591
:/usr/lib64/libgdk_pixbuf-2.0.so.0.2400.0 gdk-pixbuf2-2.24.0-1.fc16.x86_64 (Fedora Project) 1318680347
:/lib64/libresolv-2.14.90.so glibc-2.14.90-12.x86_64 (Fedora Project) 1318702693
:/usr/lib64/libcanberra.so.0.2.5 libcanberra-0.28-3.fc16.x86_64 (Fedora Project) 1318681024
:/usr/lib64/gtk-2.0/modules/libcanberra-gtk-module.so libcanberra-gtk2-0.28-3.fc16.x86_64 (Fedora Project) 1318681689
:/usr/lib64/libgvfscommon.so.0.0.0 gvfs-1.10.0-1.fc16.x86_64 (Fedora Project) 1318681551
:/lib64/libgcc_s-4.6.1-20111002.so.1 libgcc-4.6.1-10.fc16.x86_64 (Fedora Project) 1318679493
:/usr/lib64/libfontconfig.so.1.4.4 fontconfig-2.8.0-4.fc16.x86_64 (Fedora Project) 1318679684
:/usr/bin/chemtool chemtool-1.6.12-3.fc15.x86_64 (Fedora Project) 1318682899
:/lib64/librt-2.14.90.so glibc-2.14.90-12.x86_64 (Fedora Project) 1318702693
:/usr/lib64/libpangoft2-1.0.so.0.2904.0 pango-1.29.4-1.fc16.x86_64 (Fedora Project) 1318680351
:/usr/share/fonts/abattis-cantarell/Cantarell-Regular.otf abattis-cantarell-fonts-0.0.6-1.fc16.noarch (Fedora Project) 1318680270
:/usr/lib64/libpixman-1.so.0.22.2 pixman-0.22.2-1.fc16.x86_64 (Fedora Project) 1318679573
:/usr/lib64/libXcomposite.so.1.0.0 libXcomposite-0.4.3-2.fc15.x86_64 (Fedora Project) 1318680348
:/usr/lib64/gtk-2.0/modules/libpk-gtk-module.so PackageKit-gtk-module-0.6.19-2.fc16.x86_64 (Fedora Project) 1318702967
:/usr/lib64/libfreetype.so.6.7.1 freetype-2.4.6-1.fc16.x86_64 (Fedora Project) 1318679564
:/lib64/libselinux.so.1 libselinux-2.1.5-5.1.fc16.x86_64 (Fedora Project) 1318679564
:/usr/lib64/libpango-1.0.so.0.2904.0 pango-1.29.4-1.fc16.x86_64 (Fedora Project) 1318680351
:/lib64/libgobject-2.0.so.0.3000.0 glib2-2.30.0-2.fc16.x86_64 (Fedora Project) 1318679581
:/lib64/libgmodule-2.0.so.0.3000.0 glib2-2.30.0-2.fc16.x86_64 (Fedora Project) 1318679581
:/usr/lib64/libdbus-glib-1.so.2.1.0 dbus-glib-0.92-2.fc15.x86_64 (Fedora Project) 1318679585
:/usr/lib64/gtk-2.0/2.10.0/immodules/im-ibus.so ibus-gtk2-1.4.0-3.fc16.x86_64 (Fedora Project) 1318681726
:/lib64/libpthread-2.14.90.so glibc-2.14.90-12.x86_64 (Fedora Project) 1318702693
:/usr/lib64/libXfixes.so.3.1.0 libXfixes-5.0-1.fc16.x86_64 (Fedora Project) 1318680347
:/usr/lib64/libXrender.so.1.3.0 libXrender-0.9.6-2.fc15.x86_64 (Fedora Project) 1318680347
:/lib64/libcrypt-2.14.90.so glibc-2.14.90-12.x86_64 (Fedora Project) 1318702693
:/usr/lib64/libtdb.so.1.2.9 libtdb-1.2.9-10.fc16.x86_64 (Fedora Project) 1318679590
:/usr/lib64/libxml2.so.2.7.8 libxml2-2.7.8-6.fc16.x86_64 (Fedora Project) 1318679566
:/lib64/libdbus-1.so.3.5.6 dbus-libs-1:1.4.10-3.fc16.x86_64 (Fedora Project) 1318679566
:/lib64/libdl-2.14.90.so glibc-2.14.90-12.x86_64 (Fedora Project) 1318702693
:/usr/lib64/libXau.so.6.0.0 libXau-1.0.6-2.fc15.x86_64 (Fedora Project) 1318679591
:/usr/lib64/libXrandr.so.2.2.0 libXrandr-1.3.1-2.fc15.x86_64 (Fedora Project) 1318680348
:/usr/lib64/gdk-pixbuf-2.0/2.10.0/loaders/libpixbufloader-xpm.so gdk-pixbuf2-2.24.0-1.fc16.x86_64 (Fedora Project) 1318680347
:/usr/lib64/libltdl.so.7.3.0 libtool-ltdl-2.4-6.fc16.x86_64 (Fedora Project) 1318679591
:/lib64/libutil-2.14.90.so glibc-2.14.90-12.x86_64 (Fedora Project) 1318702693
:/usr/lib64/libXi.so.6.1.0 libXi-1.4.3-3.fc16.x86_64 (Fedora Project) 1318702737
:/usr/lib64/libibus-1.0.so.0.400.0 ibus-libs-1.4.0-3.fc16.x86_64 (Fedora Project) 1318681067
:/usr/lib64/libffi.so.5.0.10 libffi-3.0.10-1.fc16.x86_64 (Fedora Project) 1318679574
:/usr/lib64/libogg.so.0.7.1 libogg-2:1.2.2-3.fc15.x86_64 (Fedora Project) 1318679573
:/lib64/libudev.so.0.12.0 libudev-173-3.fc16.x86_64 (Fedora Project) 1318679571
:/usr/lib64/libXinerama.so.1.0.0 libXinerama-1.1.1-2.fc15.x86_64 (Fedora Project) 1318680351
:/lib64/libexpat.so.1.5.2 expat-2.0.1-11.fc15.x86_64 (Fedora Project) 1318679571
:/lib64/libnss_files-2.14.90.so glibc-2.14.90-12.x86_64 (Fedora Project) 1318702693
:/usr/lib64/libbluray.so.0.0.0 libbluray-0.2-0.5.20110710git51d7d60a96d06.fc16.x86_64 (Fedora Project) 1318679601
:/lib64/libglib-2.0.so.0.3000.0 glib2-2.30.0-2.fc16.x86_64 (Fedora Project) 1318679581
:/usr/lib64/libX11.so.6.3.0 libX11-1.4.3-1.fc16.x86_64 (Fedora Project) 1318680347
:/usr/lib64/gtk-2.0/2.10.0/engines/libclearlooks.so gtk2-engines-2.20.2-2.fc15.x86_64 (Fedora Project) 1318680421
:/usr/lib64/gio/modules/libgvfsdbus.so gvfs-1.10.0-1.fc16.x86_64 (Fedora Project) 1318681551
:/lib64/libc-2.14.90.so glibc-2.14.90-12.x86_64 (Fedora Project) 1318702693
:/usr/lib64/libvorbisfile.so.3.3.4 libvorbis-1:1.3.2-1.fc15.x86_64 (Fedora Project) 1318679592
:/usr/lib64/libpangocairo-1.0.so.0.2904.0 pango-1.29.4-1.fc16.x86_64 (Fedora Project) 1318680351
:/usr/lib64/libcairo.so.2.11000.2 cairo-1.10.2-4.fc16.x86_64 (Fedora Project) 1318680348

environ:
:XDG_VTNR=1
:XDG_SESSION_ID=2
:HOSTNAME=narayana
:IMSETTINGS_INTEGRATE_DESKTOP=yes
:GPG_AGENT_INFO=/tmp/keyring-SMFXEC/gpg:0:1
:TERM=xterm
:SHELL=/bin/bash
:HISTSIZE=1000
:XDG_SESSION_COOKIE=ae8d0733b99499a71f2d5d2400000015-1318734950.576738-631111862
:LATEX_MK_DIR=/usr/share/latex-mk
:GJS_DEBUG_OUTPUT=stderr
:WINDOWID=18874374
:GNOME_KEYRING_CONTROL=/tmp/keyring-SMFXEC
:QTDIR=/usr/lib64/qt-3.3
:QTINC=/usr/lib64/qt-3.3/include
:'GJS_DEBUG_TOPICS=JS ERROR;JS LOG'
:IMSETTINGS_MODULE=none
:USER=mukundan
:LS_COLORS=rs=0:di=01;34:ln=01;36:mh=00:pi=40;33:so=01;35:do=01;35:bd=40;33;01:cd=40;33;01:or=40;31;01:mi=01;05;37;41:su=37;41:sg=30;43:ca=30;41:tw=30;42:ow=34;42:st=37;44:ex=01;32:*.tar=01;31:*.tgz=01;31:*.arj=01;31:*.taz=01;31:*.lzh=01;31:*.lzma=01;31:*.tlz=01;31:*.txz=01;31:*.zip=01;31:*.z=01;31:*.Z=01;31:*.dz=01;31:*.gz=01;31:*.lz=01;31:*.xz=01;31:*.bz2=01;31:*.tbz=01;31:*.tbz2=01;31:*.bz=01;31:*.tz=01;31:*.deb=01;31:*.rpm=01;31:*.jar=01;31:*.war=01;31:*.ear=01;31:*.sar=01;31:*.rar=01;31:*.ace=01;31:*.zoo=01;31:*.cpio=01;31:*.7z=01;31:*.rz=01;31:*.jpg=01;35:*.jpeg=01;35:*.gif=01;35:*.bmp=01;35:*.pbm=01;35:*.pgm=01;35:*.ppm=01;35:*.tga=01;35:*.xbm=01;35:*.xpm=01;35:*.tif=01;35:*.tiff=01;35:*.png=01;35:*.svg=01;35:*.svgz=01;35:*.mng=01;35:*.pcx=01;35:*.mov=01;35:*.mpg=01;35:*.mpeg=01;35:*.m2v=01;35:*.mkv=01;35:*.ogm=01;35:*.mp4=01;35:*.m4v=01;35:*.mp4v=01;35:*.vob=01;35:*.qt=01;35:*.nuv=01;35:*.wmv=01;35:*.asf=01;35:*.rm=01;35:*.rmvb=01;35:*.flc=01;35:*.avi=01;35:*.fli=01;35:*.flv=01;35:*.gl=01;35:*.dl=01;35:*.xcf=01;35:*.xwd=01;35:*.yuv=01;35:*.cgm=01;35:*.emf=01;35:*.axv=01;35:*.anx=01;35:*.ogv=01;35:*.ogx=01;35:*.aac=01;36:*.au=01;36:*.flac=01;36:*.mid=01;36:*.midi=01;36:*.mka=01;36:*.mp3=01;36:*.mpc=01;36:*.ogg=01;36:*.ra=01;36:*.wav=01;36:*.axa=01;36:*.oga=01;36:*.spx=01;36:*.xspf=01;36:*.pdf=00;33:*.ps=00;33:*.ps.gz=00;33:*.txt=00;33:*.patch=00;33:*.diff=00;33:*.log=00;33:*.tex=00;33:*.xls=00;33:*.xlsx=00;33:*.ppt=00;33:*.pptx=00;33:*.rtf=00;33:*.doc=00;33:*.docx=00;33:*.odt=00;33:*.ods=00;33:*.odp=00;33:*.xml=00;33:*.epub=00;33:*.abw=00;33:*.html=00;33:*.wpd=00;33:
:SSH_AUTH_SOCK=/tmp/keyring-SMFXEC/ssh
:USERNAME=mukundan
:SESSION_MANAGER=local/unix:@/tmp/.ICE-unix/1754,unix/unix:/tmp/.ICE-unix/1754
:PATH=/usr/lib64/qt-3.3/bin:/usr/lib64/ccache:/usr/local/bin:/usr/bin:/bin:/usr/local/sbin:/usr/sbin:/sbin:/home/mukundan/.local/bin:/home/mukundan/bin
:MAIL=/var/spool/mail/mukundan
:DESKTOP_SESSION=gnome
:QT_IM_MODULE=xim
:PWD=/home/mukundan
:XMODIFIERS=@im=none
:GNOME_KEYRING_PID=1748
:LANG=en_US.UTF-8
:KDE_IS_PRELINKED=1
:KDEDIRS=/usr
:GDMSESSION=gnome
:HISTCONTROL=ignoredups
:XDG_SEAT=seat0
:HOME=/home/mukundan
:SHLVL=2
:GNOME_DESKTOP_SESSION_ID=this-is-deprecated
:LOGNAME=mukundan
:QTLIB=/usr/lib64/qt-3.3/lib
:CVS_RSH=ssh
:DBUS_SESSION_BUS_ADDRESS=unix:abstract=/tmp/dbus-O1S2iu4bJV,guid=61fb0ce0a6069a441fae50f70000002f
:'LESSOPEN=||/usr/bin/lesspipe.sh %s'
:WINDOWPATH=1
:XDG_RUNTIME_DIR=/run/user/mukundan
:DISPLAY=:0.0
:COLORTERM=gnome-terminal
:XAUTHORITY=/var/run/gdm/auth-for-mukundan-xJTJ5u/database
:_=/usr/bin/chemtool

var_log_messages:
:Oct 15 23:38:32 narayana kernel: [ 5001.573970] chemtool[5779]: segfault at 1 ip 0000003c30d5ac61 sp 00007fff62502c28 error 4 in libc-2.14.90.so[3c30c00000+1ac000]
:Oct 15 23:38:32 narayana abrt[5786]: saved core dump of pid 5779 (/usr/bin/chemtool) to /var/spool/abrt/ccpp-2011-10-15-23:38:32-5779 (4014080 bytes)
Comment 1 Mukundan Ragavan 2011-10-16 04:42:04 UTC 
Created attachment 528361 [details]
File: maps
Comment 2 Mukundan Ragavan 2011-10-16 04:42:05 UTC 
Created attachment 528362 [details]
File: backtrace
Comment 3 Fedora Update System 2012-03-12 21:06:19 UTC 
chemtool-1.6.13-1.fc16 has been submitted as an update for Fedora 16.
https://admin.fedoraproject.org/updates/chemtool-1.6.13-1.fc16
Comment 4 Fedora Update System 2012-03-15 02:22:39 UTC 
Package chemtool-1.6.13-1.fc16:
* should fix your issue,
* was pushed to the Fedora 16 testing repository,
* should be available at your local mirror within two days.
Update it with:
# su -c 'yum update --enablerepo=updates-testing chemtool-1.6.13-1.fc16'
as soon as you are able to.
Please go to the following url:
https://admin.fedoraproject.org/updates/FEDORA-2012-3721/chemtool-1.6.13-1.fc16
then log in and leave karma (feedback).
Comment 5 Fedora Update System 2012-05-01 00:49:55 UTC 
chemtool-1.6.13-1.fc16 has been pushed to the Fedora 16 stable repository.  If problems still persist, please make note of it in this bug report.