Bug 999823 (python-scikit-learn_unbundling-tracker)

Summary:	Remove bundled libraries from python-scikit-learn
Product:	[Fedora] Fedora	Reporter:	Tadej Janež <tadej.j>
Component:	python-scikit-learn	Assignee:	Sergio Pascual <sergio.pasra>
Status:	CLOSED CURRENTRELEASE	QA Contact:	Fedora Extras Quality Assurance <extras-qa>
Severity:	unspecified	Docs Contact:
Priority:	unspecified
Version:	22	CC:	besser82, ignatenko, sergio.pasra
Target Milestone:	---
Target Release:	---
Hardware:	Unspecified
OS:	Unspecified
Whiteboard:
Fixed In Version:		Doc Type:	Bug Fix
Doc Text:		Story Points:	---
Clone Of:		Environment:
Last Closed:	2015-11-25 20:52:57 UTC	Type:	Bug
Regression:	---	Mount Type:	---
Documentation:	---	CRM:
Verified Versions:		Category:	---
oVirt Team:	---	RHEL 7.3 requirements from Atomic Host:
Cloudforms Team:	---	Target Upstream Version:
Embargoed:
Bug Depends On:	1003394
Bug Blocks:	1011110, 504493, 976714

Description Tadej Janež 2013-08-22 08:36:50 UTC

Description of problem:
As described in a post to the scikit-learn mailing list by Björn Esser yesterday [1], scikit-learn contains many bundled libraries that are not allowed by Fedora's packaging guidelines [2]:
* libsvm
* liblinear
* cblas from atlas
* blas (converted from Fortran to C using f2c)
* python-six (*)
* python-joblib

Please fix those by collaborating with the upstream authors.

(*) This is not bundled with the current version 0.13.1, but it will be with the recently released 0.14.
[1] http://sourceforge.net/mailarchive/message.php?msg_id=31313259
[2] https://fedoraproject.org/wiki/Packaging:No_Bundled_Libraries

Comment 1 Björn Esser (besser82) 2013-09-14 11:51:41 UTC

Any news on this, Sergio?

Comment 2 Sergio Pascual 2013-09-15 22:16:00 UTC

I have unbundled cblas, blas and joblib in python-scikit-learn-0.14.1-2.fc21

To unbundle six we need it at version 1.4. I have pinged six maintainer but he hasn't answered yet.

I'm leaving libsvm and liblinear for later.

Comment 3 Sergio Pascual 2013-09-25 21:20:45 UTC

Update, now we have the required six in f20 and rawhide. I have asked the maintainer to update in f19 and f18 also.

After the atlas update in rawhide, python-scikit-learn is broken, but I can't fix it until scipy is fixed also

Comment 4 Jaroslav Reznik 2015-03-03 14:59:52 UTC

This bug appears to have been reported against 'rawhide' during the Fedora 22 development cycle.
Changing version to '22'.

More information and reason for this action is here:
https://fedoraproject.org/wiki/Fedora_Program_Management/HouseKeeping/Fedora22