Red Hat Bugzilla – Bug 1024950
Warnings when importing h5py in python 2.6
Last modified: 2017-06-19 17:16:03 EDT
Description of problem:
When importing h5py into python, warnings occur.
Version-Release number of selected component (if applicable):
Steps to Reproduce:
1. start python
2. import h5py
Python 2.6.6 (r266:84292, May 27 2013, 05:35:12)
[GCC 4.4.7 20120313 (Red Hat 4.4.7-3)] on linux2
Type "help", "copyright", "credits" or "license" for more information.
>>> import h5py
/usr/lib64/python2.6/site-packages/h5py/__init__.py:24: RuntimeWarning: numpy.dtype size changed, may indicate binary incompatibility
/usr/lib64/python2.6/site-packages/h5py/__init__.py:34: RuntimeWarning: numpy.dtype size changed, may indicate binary incompatibility
import h5, h5a, h5d, h5f, h5fd, h5g, h5l, h5o, h5i, h5p, h5r, h5s, h5t, h5z
a quiet import of the module
The warning seems to be only a warning, execution continues and the python module is usable.
Any progress on this? I'm experiencing the issue.
Package versions involved:
Temporary work around was to downgrade numpy to numpy-1.3.0-6.2.el6.x86_64.
h5py-1.3.1-7.el6 has been submitted as an update to Fedora EPEL 6. https://bodhi.fedoraproject.org/updates/FEDORA-EPEL-2017-64d71d6bf8
Version 1.3.1-7 from bodhi seems to do the job.
h5py-1.3.1-7.el6 has been pushed to the Fedora EPEL 6 testing repository. If problems still persist, please make note of it in this bug report.
See https://fedoraproject.org/wiki/QA:Updates_Testing for
instructions on how to install test updates.
You can provide feedback for this update here: https://bodhi.fedoraproject.org/updates/FEDORA-EPEL-2017-64d71d6bf8
h5py-1.3.1-7.el6 has been pushed to the Fedora EPEL 6 stable repository. If problems still persist, please make note of it in this bug report.