Bug 1043283 (shogun) - Review Request: shogun - Large Scale Machine Learning Toolbox
Summary: Review Request: shogun - Large Scale Machine Learning Toolbox
Keywords:
Status: CLOSED ERRATA
Alias: shogun
Product: Fedora
Classification: Fedora
Component: Package Review
Version: rawhide
Hardware: All
OS: Linux
medium
medium
Target Milestone: ---
Assignee: Wolfgang Ulbrich
QA Contact: Fedora Extras Quality Assurance
URL:
Whiteboard:
Depends On:
Blocks: ML-SIG
TreeView+ depends on / blocked
 
Reported: 2013-12-15 16:34 UTC by Björn Esser (besser82)
Modified: 2013-12-21 02:10 UTC (History)
3 users (show)

Fixed In Version: shogun-3.1.0-0.9.git20131219.207a709.fc20
Clone Of:
Environment:
Last Closed: 2013-12-17 19:10:39 UTC
Type: ---
Embargoed:
raveit65.sun: fedora-review+
gwync: fedora-cvs+


Attachments (Terms of Use)

Description Björn Esser (besser82) 2013-12-15 16:34:11 UTC
Description:

  The SHOGUN machine learning toolbox's focus is on large scale kernel
  methods and especially on Support Vector Machines (SVM).  It provides
  a generic SVM object interfacing to several different SVM implementations,
  among them the state of the art LibSVM.  Each of the SVMs can be combined
  with a variety of kernels.  The toolbox not only provides efficient
  implementations of the most common kernels, like the Linear, Polynomial,
  Gaussian and Sigmoid Kernel but also comes with a number of recent string
  kernels as e.g. the Locality Improved, Fischer, TOP, Spectrum, Weighted
  Degree Kernel (with shifts).  For the latter the efficient LINADD
  optimizations are implemented.  Also SHOGUN offers the freedom of working
  with custom pre-computed kernels.  One of its key features is the "combined
  kernel" which can be constructed by a weighted linear combination of a
  number of sub-kernels, each of which not necessarily working on the same
  domain.  An optimal sub-kernel weighting can be learned using Multiple
  Kernel Learning.  Currently SVM 2-class classification and regression
  problems can be dealt with.  However SHOGUN also implements a number of
  linear methods like Linear Discriminant Analysis (LDA), Linear Programming
  Machine (LPM), (Kernel) Perceptrons and features algorithms to train hidden
  Markov-models.  The input feature-objects can be dense, sparse or strings
  and of type int/short/double/char and can be converted into different
  feature types.  Chains of "pre-processors" (e.g. subtracting the mean) can
  be attached to each feature object allowing for on-the-fly pre-processing.

  SHOGUN is implemented in C++ and offers interfaces for

    * CLI
    * Lua
    * Mono (C#)
    * Octave
    * Python
    * Ruby


Koji Builds:

  el5:  no build ---> missing dependencies
  el6:  no build ---> missing dependencies
  F18:  no build ---> will be soon EOL
  F19:  no build ---> only scratch-build for rawhide, because srpm is huge
  F20:  no build ---> only scratch-build for rawhide, because srpm is huge
  Frh:  currently uploading, will post url during today


Issues:

  fedora-review shows no obvious issues.  AFAIK there might be  some false
  positives from rpmlint.


FAS-User:

  besser82


Urls:

  Spec URL: http://besser82.fedorapeople.org/review/shogun.spec
  SRPM URL: http://besser82.fedorapeople.org/review/shogun-3.0.0-0.1.fc20.src.rpm


Additional Information:

  SRPM is ~250 MBytes.  Build takes ~15 mins on i7-2860QM (4-core with HT =
  8 Threads).  BuildRequires are ~1 GByte.  Parallel-make will use ~1.5
  GBytes of RAM per thread.  BuildDir needs ~15 Gbytes of disk-space.


Thanks for review in advance!

Comment 1 Björn Esser (besser82) 2013-12-15 16:37:17 UTC
Corrected Urls:

  Spec URL: http://besser82.fedorapeople.org/review/shogun.spec
  SRPM URL: http://besser82.fedorapeople.org/review/shogun-3.0.0-1.fc20.src.rpm

Comment 2 Björn Esser (besser82) 2013-12-15 19:42:26 UTC
Koji Builds:

  el5:  no build ---> missing dependencies
  el6:  no build ---> missing dependencies
  F18:  no build ---> will be soon EOL
  F19:  no build ---> only scratch-build for rawhide, because srpm is huge
  F20:  no build ---> only scratch-build for rawhide, because srpm is huge
  Frh:  http://koji.fedoraproject.org/koji/taskinfo?taskID=6296885


Thanks for taking, Wolfgang!  :D

Comment 3 Björn Esser (besser82) 2013-12-16 09:22:40 UTC
New Koji Builds (done by raveit65):

  el5:  no build ---> missing dependencies
  el6:  no build ---> missing dependencies
  F18:  no build ---> will be soon EOL
  F19:  no build ---> only scratch-build for rawhide, because srpm is huge
  F20:  no build ---> only scratch-build for rawhide, because srpm is huge
  Frh:  http://koji.fedoraproject.org/koji/taskinfo?taskID=6297916


Looks like `mono-shogun` is segfaulting for some reason on ARMv7hl.  :(

Comment 4 Björn Esser (besser82) 2013-12-16 16:22:51 UTC
Updated package:

  %changelog
  * Mon Dec 16 2013 Björn Esser <bjoern.esser> -
    3.1.0-0.1.git20131212.70e774d
  - updated to latest git-snapshot (#1043283)
  - disabled shogun-mono, because it segfaults currently and has some
    severe problems on ARMv7hl

  * Sun Dec 15 2013 Björn Esser <bjoern.esser> - 3.0.0-1
  - Initial rpm release (#1043283)


Koji Builds:

  el5:  no build ---> missing dependencies
  el6:  no build ---> missing dependencies
  F18:  no build ---> will be soon EOL
  F19:  no build ---> only scratch-build for rawhide, because srpm is huge
  F20:  no build ---> only scratch-build for rawhide, because srpm is huge
  Frh:  http://koji.fedoraproject.org/koji/taskinfo?taskID=6301365


Urls:

  Spec URL: http://besser82.fedorapeople.org/review/shogun.spec
  SRPM URL: http://besser82.fedorapeople.org/review/shogun-3.1.0-0.1.git20131212.70e774d.fc20.src.rpm

Comment 5 Wolfgang Ulbrich 2013-12-16 19:12:04 UTC
APPROVED !

Package Review
==============

Legend:
[x] = Pass, [!] = Fail, [-] = Not applicable, [?] = Not evaluated
[ ] = Manual review needed



===== MUST items =====

C/C++:
[x]: Package does not contain kernel modules.
[x]: Package contains no static executables.
[x]: Development (unversioned) .so files in -devel subpackage, if present.
     Note: Unversioned so-files in private %_libdir subdirectory (see
     attachment). Verify they are not in ld path.
[x]: Header files in -devel subpackage, if present.
[x]: ldconfig called in %post and %postun if required.
[x]: Package does not contain any libtool archives (.la)
[x]: Rpath absent or only used for internal libs.

Generic:
[x]: Package successfully compiles and builds into binary rpms on at least one
     supported primary architecture.
     Note: Using prebuilt packages
[x]: Package is licensed with an open-source compatible license and meets
     other legal requirements as defined in the legal section of Packaging
     Guidelines.
[x]: License field in the package spec file matches the actual license.
     Note: Checking patched sources after %prep for licenses. Licenses found:
     "GPL", "GPL (v2 or later)", "GPL (v3 or later)", "Unknown or generated",
     "MIT/X11 (BSD like)", "*No copyright* GPL (v3 or later)", "BSD (2
     clause)", "LGPL (v2.1 or later)", "GPL (v3)", "Public domain GPL (v3 or
     later)", "GPL (v2.1 or later) (with incorrect FSF address) LGPL (v2.1 or
     later) (with incorrect FSF address)". 1929 files have unknown license.
     Detailed output of licensecheck in /home/rave/Test/review-
     shogun/licensecheck.txt
[x]: License file installed when any subpackage combination is installed.
[x]: If the package is under multiple licenses, the licensing breakdown must
     be documented in the spec.
[x]: Package requires other packages for directories it uses.
     Note: No known owner of /usr/lib64/lua/5.2
[x]: Package must own all directories that it creates.
     Note: Directories without known owners: /usr/lib64/lua/5.2,
     /usr/lib64/ruby/vendor_ruby, /usr/lib64/ruby
[x]: %build honors applicable compiler flags or justifies otherwise.
[x]: All build dependencies are listed in BuildRequires, except for any that
     are listed in the exceptions section of Packaging Guidelines.
     Note: Using prebuilt rpms.
[x]: Package contains no bundled libraries without FPC exception.
[x]: Changelog in prescribed format.
[x]: Sources contain only permissible code or content.
[x]: Package contains desktop file if it is a GUI application.
[x]: Development files must be in a -devel package
[x]: Package uses nothing in %doc for runtime.
[x]: Package consistently uses macros (instead of hard-coded directory names).
[x]: Package is named according to the Package Naming Guidelines.
[x]: Package does not generate any conflict.
[x]: Package obeys FHS, except libexecdir and /usr/target.
[x]: If the package is a rename of another package, proper Obsoletes and
     Provides are present.
[x]: Requires correct, justified where necessary.
[x]: Spec file is legible and written in American English.
[x]: Package contains systemd file(s) if in need.
[x]: Useful -debuginfo package or justification otherwise.
[x]: Package is not known to require an ExcludeArch tag.
[x]: Large documentation must go in a -doc subpackage. Large could be size
     (~1MB) or number of files.
     Note: Documentation size is 81920 bytes in 5 files.
[x]: Package complies to the Packaging Guidelines
[x]: Package installs properly.
[x]: Rpmlint is run on all rpms the build produces.
     Note: There are rpmlint messages (see attachment).
[x]: If (and only if) the source package includes the text of the license(s)
     in its own file, then that file, containing the text of the license(s)
     for the package is included in %doc.
[x]: Package does not own files or directories owned by other packages.
[x]: Package uses either %{buildroot} or $RPM_BUILD_ROOT
[x]: Package does not run rm -rf %{buildroot} (or $RPM_BUILD_ROOT) at the
     beginning of %install.
[x]: Each %files section contains %defattr if rpm < 4.4
[x]: Macros in Summary, %description expandable at SRPM build time.
[x]: Package does not contain duplicates in %files.
[x]: Permissions on files are set properly.
[x]: Package use %makeinstall only when make install' ' DESTDIR=... doesn't
     work.
[x]: Package is named using only allowed ASCII characters.
[x]: Package do not use a name that already exist
[x]: Package is not relocatable.
[x]: Sources used to build the package match the upstream source, as provided
     in the spec URL.
[x]: Spec file name must match the spec package %{name}, in the format
     %{name}.spec.
[x]: File names are valid UTF-8.
[x]: Packages must not store files under /srv, /opt or /usr/local

Python:
[x]: Python eggs must not download any dependencies during the build process.
[x]: A package which is used by another package via an egg interface should
     provide egg info.
[x]: Package meets the Packaging Guidelines::Python
[x]: Package contains BR: python2-devel or python3-devel
[x]: Binary eggs must be removed in %prep

===== SHOULD items =====

Generic:
[x]: Reviewer should test that the package builds in mock.
[x]: Package has no %clean section with rm -rf %{buildroot} (or
     $RPM_BUILD_ROOT)
     Note: %clean present but not required
[x]: If the source package does not include license text(s) as a separate file
     from upstream, the packager SHOULD query upstream to include it.
[x]: Final provides and requires are sane (see attachments).
[x]: Fully versioned dependency in subpackages if applicable.
     Note: No Requires: %{name}%{?_isa} = %{version}-%{release} in shogun-doc
[x]: Package functions as described.
[x]: Latest version is packaged.
[x]: Package does not include license text files separate from upstream.
[x]: Scriptlets must be sane, if used.
[x]: Description and summary sections in the package spec file contains
     translations for supported Non-English languages, if available.
[x]: Package should compile and build into binary rpms on all supported
     architectures.
[x]: %check is present and all tests pass.
[x]: Packages should try to preserve timestamps of original installed files.
[x]: Packager, Vendor, PreReq, Copyright tags should not be in spec file
[x]: Sources can be downloaded from URI in Source: tag
[x]: Buildroot is not present
[x]: Dist tag is present (not strictly required in GL).
[x]: No file requires outside of /etc, /bin, /sbin, /usr/bin, /usr/sbin.
[x]: Uses parallel make %{?_smp_mflags} macro.
[x]: SourceX tarball generation or download is documented.
[x]: SourceX is a working URL.
[x]: Spec use %global instead of %define unless justified.

===== EXTRA items =====

Generic:
[x]: Rpmlint is run on all installed packages.
     Note: There are rpmlint messages (see attachment).
[x]: Large data in /usr/share should live in a noarch subpackage if package is
     arched.
[x]: Spec file according to URL is the same as in SRPM.


Rpmlint
-------
Checking: shogun-3.1.0-0.1.git20131212.70e774d.fc21.x86_64.rpm
          shogun-cli-3.1.0-0.1.git20131212.70e774d.fc21.x86_64.rpm
          shogun-devel-3.1.0-0.1.git20131212.70e774d.fc21.x86_64.rpm
          shogun-doc-3.1.0-0.1.git20131212.70e774d.fc21.noarch.rpm
          lua-shogun-3.1.0-0.1.git20131212.70e774d.fc21.x86_64.rpm
          octave-shogun-3.1.0-0.1.git20131212.70e774d.fc21.x86_64.rpm
          python-shogun-3.1.0-0.1.git20131212.70e774d.fc21.x86_64.rpm
          ruby-shogun-3.1.0-0.1.git20131212.70e774d.fc21.x86_64.rpm
          shogun-3.1.0-0.1.git20131212.70e774d.fc20.src.rpm
shogun.x86_64: W: spelling-error %description -l en_US optimizations -> optimization, optimization's, optimization s
shogun.x86_64: W: spelling-error %description -l en_US pre -> per, ore, pee
shogun.x86_64: W: shared-lib-calls-exit /usr/lib64/libshogun.so.15.0 exit.5
shogun-cli.x86_64: W: spelling-error %description -l en_US optimizations -> optimization, optimization's, optimization s
shogun-cli.x86_64: W: spelling-error %description -l en_US pre -> per, ore, pee
shogun-cli.x86_64: W: no-documentation
shogun-cli.x86_64: W: no-manual-page-for-binary shogun
shogun-devel.x86_64: W: spelling-error %description -l en_US optimizations -> optimization, optimization's, optimization s
shogun-devel.x86_64: W: spelling-error %description -l en_US pre -> per, ore, pee
shogun-doc.noarch: W: spelling-error %description -l en_US optimizations -> optimization, optimization's, optimization s
shogun-doc.noarch: W: spelling-error %description -l en_US pre -> per, ore, pee
lua-shogun.x86_64: W: spelling-error %description -l en_US optimizations -> optimization, optimization's, optimization s
lua-shogun.x86_64: W: spelling-error %description -l en_US pre -> per, ore, pee
lua-shogun.x86_64: W: no-documentation
octave-shogun.x86_64: W: spelling-error %description -l en_US optimizations -> optimization, optimization's, optimization s
octave-shogun.x86_64: W: spelling-error %description -l en_US pre -> per, ore, pee
octave-shogun.x86_64: W: no-documentation
python-shogun.x86_64: W: spelling-error %description -l en_US optimizations -> optimization, optimization's, optimization s
python-shogun.x86_64: W: spelling-error %description -l en_US pre -> per, ore, pee
python-shogun.x86_64: W: no-documentation
ruby-shogun.x86_64: W: spelling-error %description -l en_US optimizations -> optimization, optimization's, optimization s
ruby-shogun.x86_64: W: spelling-error %description -l en_US pre -> per, ore, pee
ruby-shogun.x86_64: W: no-documentation
shogun.src: W: spelling-error %description -l en_US optimizations -> optimization, optimization's, optimization s
shogun.src: W: spelling-error %description -l en_US pre -> per, ore, pee
shogun.src:192: W: unversioned-explicit-provides bundled(dSFMT)
shogun.src:193: W: unversioned-explicit-provides bundled(gnulib)
shogun.src:194: W: unversioned-explicit-provides bundled(liblinear)
shogun.src:195: W: unversioned-explicit-provides bundled(libsvm)
shogun.src:196: W: unversioned-explicit-provides bundled(SFMT)
shogun.src:197: W: unversioned-explicit-provides bundled(SVMlin)

# this is for mono, we can ignorew this

shogun.src:842: E: hardcoded-library-path in %{_prefix}/lib/cli/%{name}
shogun.src: E: specfile-error sh: octave-config: command not found
shogun.src: E: specfile-error sh: octave-config: command not found
shogun.src: E: specfile-error which: no mono in (/usr/lib64/qt-3.3/bin:/usr/libexec/lightdm:/usr/local/bin:/usr/bin:/bin:/usr/local/sbin:/usr/sbin:/home/rave/.local/bin:/home/rave/bin)
9 packages and 0 specfiles checked; 4 errors, 31 warnings.




Rpmlint (installed packages)
----------------------------
# rpmlint ruby-shogun shogun-doc lua-shogun shogun-cli python-sho 
gun shogun shogun-devel octave-shogun
ruby-shogun.x86_64: W: spelling-error %description -l en_US optimizations -> optimization, optimization's, optimization s
ruby-shogun.x86_64: W: spelling-error %description -l en_US pre -> per, ore, pee
ruby-shogun.x86_64: W: no-documentation
shogun-doc.noarch: W: spelling-error %description -l en_US optimizations -> optimization, optimization's, optimization s
shogun-doc.noarch: W: spelling-error %description -l en_US pre -> per, ore, pee
lua-shogun.x86_64: W: spelling-error %description -l en_US optimizations -> optimization, optimization's, optimization s
lua-shogun.x86_64: W: spelling-error %description -l en_US pre -> per, ore, pee
lua-shogun.x86_64: W: no-documentation
shogun-cli.x86_64: W: spelling-error %description -l en_US optimizations -> optimization, optimization's, optimization s
shogun-cli.x86_64: W: spelling-error %description -l en_US pre -> per, ore, pee
shogun-cli.x86_64: W: no-documentation
shogun-cli.x86_64: W: no-manual-page-for-binary shogun
python-shogun.x86_64: W: spelling-error %description -l en_US optimizations -> optimization, optimization's, optimization s
python-shogun.x86_64: W: spelling-error %description -l en_US pre -> per, ore, pee
python-shogun.x86_64: W: no-documentation
shogun.x86_64: W: spelling-error %description -l en_US optimizations -> optimization, optimization's, optimization s
shogun.x86_64: W: spelling-error %description -l en_US pre -> per, ore, pee
shogun.x86_64: W: unused-direct-shlib-dependency /usr/lib64/libshogun.so.15.0 /lib64/liblpsolve55.so
shogun.x86_64: W: unused-direct-shlib-dependency /usr/lib64/libshogun.so.15.0 /lib64/libdl.so.2
shogun.x86_64: W: shared-lib-calls-exit /usr/lib64/libshogun.so.15.0 exit.5
shogun-devel.x86_64: W: spelling-error %description -l en_US optimizations -> optimization, optimization's, optimization s
shogun-devel.x86_64: W: spelling-error %description -l en_US pre -> per, ore, pee
octave-shogun.x86_64: W: spelling-error %description -l en_US optimizations -> optimization, optimization's, optimization s
octave-shogun.x86_64: W: spelling-error %description -l en_US pre -> per, ore, pee
octave-shogun.x86_64: W: no-documentation
8 packages and 0 specfiles checked; 0 errors, 25 warnings.
# echo 'rpmlint-done:'



Requires
--------
ruby-shogun (rpmlib, GLIBC filtered):
    libColPack.so.0()(64bit)
    libarpack.so.2()(64bit)
    libarprec.so.0()(64bit)
    libbz2.so.1()(64bit)
    libc.so.6()(64bit)
    libcurl.so.4()(64bit)
    libdl.so.2()(64bit)
    libgcc_s.so.1()(64bit)
    libgcc_s.so.1(GCC_3.0)(64bit)
    libgcc_s.so.1(GCC_4.0.0)(64bit)
    libglpk.so.36()(64bit)
    libhdf5.so.8()(64bit)
    libjson-c.so.2()(64bit)
    liblpsolve55.so()(64bit)
    liblzma.so.5()(64bit)
    liblzo2.so.2()(64bit)
    libm.so.6()(64bit)
    libnlopt_cxx.so.0()(64bit)
    libprotobuf.so.8()(64bit)
    libpthread.so.0()(64bit)
    libruby.so.2.0()(64bit)
    libshogun.so.15()(64bit)
    libsnappy.so.1()(64bit)
    libstdc++.so.6()(64bit)
    libstdc++.so.6(CXXABI_1.3)(64bit)
    libstdc++.so.6(CXXABI_1.3.1)(64bit)
    libtatlas.so.3()(64bit)
    libxml2.so.2()(64bit)
    libz.so.1()(64bit)
    rtld(GNU_HASH)
    ruby(release)
    rubygem(narray)(x86-64)
    shogun(x86-64)

shogun-doc (rpmlib, GLIBC filtered):

lua-shogun (rpmlib, GLIBC filtered):
    libColPack.so.0()(64bit)
    libarpack.so.2()(64bit)
    libarprec.so.0()(64bit)
    libbz2.so.1()(64bit)
    libc.so.6()(64bit)
    libcurl.so.4()(64bit)
    libdl.so.2()(64bit)
    libgcc_s.so.1()(64bit)
    libgcc_s.so.1(GCC_3.0)(64bit)
    libgcc_s.so.1(GCC_4.0.0)(64bit)
    libglpk.so.36()(64bit)
    libhdf5.so.8()(64bit)
    libjson-c.so.2()(64bit)
    liblpsolve55.so()(64bit)
    liblua-5.2.so()(64bit)
    liblzma.so.5()(64bit)
    liblzo2.so.2()(64bit)
    libm.so.6()(64bit)
    libnlopt_cxx.so.0()(64bit)
    libprotobuf.so.8()(64bit)
    libpthread.so.0()(64bit)
    libshogun.so.15()(64bit)
    libsnappy.so.1()(64bit)
    libstdc++.so.6()(64bit)
    libstdc++.so.6(CXXABI_1.3)(64bit)
    libstdc++.so.6(CXXABI_1.3.1)(64bit)
    libtatlas.so.3()(64bit)
    libxml2.so.2()(64bit)
    libz.so.1()(64bit)
    lua(abi)
    lua(x86-64)
    rtld(GNU_HASH)
    shogun(x86-64)

shogun-cli (rpmlib, GLIBC filtered):
    libColPack.so.0()(64bit)
    libarpack.so.2()(64bit)
    libarprec.so.0()(64bit)
    libbz2.so.1()(64bit)
    libc.so.6()(64bit)
    libcurl.so.4()(64bit)
    libdl.so.2()(64bit)
    libgcc_s.so.1()(64bit)
    libgcc_s.so.1(GCC_3.0)(64bit)
    libglpk.so.36()(64bit)
    libgomp.so.1()(64bit)
    libhdf5.so.8()(64bit)
    libjson-c.so.2()(64bit)
    liblpsolve55.so()(64bit)
    liblzma.so.5()(64bit)
    liblzo2.so.2()(64bit)
    libm.so.6()(64bit)
    libnlopt_cxx.so.0()(64bit)
    libprotobuf.so.8()(64bit)
    libpthread.so.0()(64bit)
    libshogun.so.15()(64bit)
    libsnappy.so.1()(64bit)
    libstdc++.so.6()(64bit)
    libstdc++.so.6(CXXABI_1.3)(64bit)
    libstdc++.so.6(CXXABI_1.3.1)(64bit)
    libtatlas.so.3()(64bit)
    libxml2.so.2()(64bit)
    libz.so.1()(64bit)
    rtld(GNU_HASH)
    shogun(x86-64)

python-shogun (rpmlib, GLIBC filtered):
    libColPack.so.0()(64bit)
    libarpack.so.2()(64bit)
    libarprec.so.0()(64bit)
    libbz2.so.1()(64bit)
    libc.so.6()(64bit)
    libcurl.so.4()(64bit)
    libdl.so.2()(64bit)
    libgcc_s.so.1()(64bit)
    libgcc_s.so.1(GCC_3.0)(64bit)
    libgcc_s.so.1(GCC_4.0.0)(64bit)
    libglpk.so.36()(64bit)
    libhdf5.so.8()(64bit)
    libjson-c.so.2()(64bit)
    liblpsolve55.so()(64bit)
    liblzma.so.5()(64bit)
    liblzo2.so.2()(64bit)
    libm.so.6()(64bit)
    libnlopt_cxx.so.0()(64bit)
    libprotobuf.so.8()(64bit)
    libpthread.so.0()(64bit)
    libpython2.7.so.1.0()(64bit)
    libshogun.so.15()(64bit)
    libsnappy.so.1()(64bit)
    libstdc++.so.6()(64bit)
    libstdc++.so.6(CXXABI_1.3)(64bit)
    libstdc++.so.6(CXXABI_1.3.1)(64bit)
    libtatlas.so.3()(64bit)
    libxml2.so.2()(64bit)
    libz.so.1()(64bit)
    numpy(x86-64)
    python(abi)
    python(x86-64)
    rtld(GNU_HASH)
    scipy(x86-64)
    shogun(x86-64)

shogun (rpmlib, GLIBC filtered):
    /sbin/ldconfig
    libColPack.so.0()(64bit)
    libarpack.so.2()(64bit)
    libarprec.so.0()(64bit)
    libbz2.so.1()(64bit)
    libc.so.6()(64bit)
    libcurl.so.4()(64bit)
    libdl.so.2()(64bit)
    libgcc_s.so.1()(64bit)
    libgcc_s.so.1(GCC_3.0)(64bit)
    libgcc_s.so.1(GCC_4.0.0)(64bit)
    libglpk.so.36()(64bit)
    libgomp.so.1()(64bit)
    libgomp.so.1(GOMP_1.0)(64bit)
    libgomp.so.1(OMP_1.0)(64bit)
    libgomp.so.1(OMP_2.0)(64bit)
    libhdf5.so.8()(64bit)
    libjson-c.so.2()(64bit)
    liblpsolve55.so()(64bit)
    liblzma.so.5()(64bit)
    liblzma.so.5(XZ_5.0)(64bit)
    liblzo2.so.2()(64bit)
    libm.so.6()(64bit)
    libnlopt_cxx.so.0()(64bit)
    libprotobuf.so.8()(64bit)
    libpthread.so.0()(64bit)
    libsnappy.so.1()(64bit)
    libstdc++.so.6()(64bit)
    libstdc++.so.6(CXXABI_1.3)(64bit)
    libtatlas.so.3()(64bit)
    libxml2.so.2()(64bit)
    libxml2.so.2(LIBXML2_2.4.30)(64bit)
    libxml2.so.2(LIBXML2_2.6.0)(64bit)
    libxml2.so.2(LIBXML2_2.7.3)(64bit)
    libz.so.1()(64bit)
    rtld(GNU_HASH)

shogun-devel (rpmlib, GLIBC filtered):
    ColPack-devel(x86-64)
    NLopt-devel(x86-64)
    arpack-devel(x86-64)
    arprec-devel(x86-64)
    atlas-devel(x86-64)
    blas-devel(x86-64)
    bzip2-devel(x86-64)
    eigen3-devel
    glpk-devel(x86-64)
    hdf5-devel(x86-64)
    json-c-devel(x86-64)
    libcurl-devel(x86-64)
    libshogun.so.15()(64bit)
    libxml2-devel(x86-64)
    lpsolve-devel(x86-64)
    lzo-devel(x86-64)
    qd-devel(x86-64)
    shogun(x86-64)
    snappy-devel(x86-64)
    tapkee-devel
    xz-devel(x86-64)
    zlib-devel(x86-64)

octave-shogun (rpmlib, GLIBC filtered):
    libColPack.so.0()(64bit)
    libarpack.so.2()(64bit)
    libarprec.so.0()(64bit)
    libbz2.so.1()(64bit)
    libc.so.6()(64bit)
    libcurl.so.4()(64bit)
    libdl.so.2()(64bit)
    libgcc_s.so.1()(64bit)
    libgcc_s.so.1(GCC_3.0)(64bit)
    libgcc_s.so.1(GCC_4.0.0)(64bit)
    libglpk.so.36()(64bit)
    libhdf5.so.8()(64bit)
    libjson-c.so.2()(64bit)
    liblpsolve55.so()(64bit)
    liblzma.so.5()(64bit)
    liblzo2.so.2()(64bit)
    libm.so.6()(64bit)
    libnlopt_cxx.so.0()(64bit)
    liboctinterp.so.1()(64bit)
    libprotobuf.so.8()(64bit)
    libpthread.so.0()(64bit)
    libshogun.so.15()(64bit)
    libsnappy.so.1()(64bit)
    libstdc++.so.6()(64bit)
    libstdc++.so.6(CXXABI_1.3)(64bit)
    libstdc++.so.6(CXXABI_1.3.1)(64bit)
    libtatlas.so.3()(64bit)
    libxml2.so.2()(64bit)
    libz.so.1()(64bit)
    octave(api)
    octave(x86-64)
    rtld(GNU_HASH)
    shogun(x86-64)



Provides
--------
ruby-shogun:
    ruby-shogun
    ruby-shogun(x86-64)

shogun-doc:
    shogun-doc

lua-shogun:
    lua-shogun
    lua-shogun(x86-64)

shogun-cli:
    shogun-cli
    shogun-cli(x86-64)

python-shogun:
    python-shogun
    python-shogun(x86-64)

shogun:
    bundled(SFMT)
    bundled(SVMlin)
    bundled(dSFMT)
    bundled(gnulib)
    bundled(liblinear)
    bundled(libsvm)
    libshogun.so.15()(64bit)
    shogun
    shogun(x86-64)

shogun-devel:
    shogun-devel
    shogun-devel(x86-64)

octave-shogun:
    octave-shogun
    octave-shogun(x86-64)



Unversioned so-files
--------------------
lua-shogun: /usr/lib64/lua/5.2/libmodshogun.so
python-shogun: /usr/lib64/python2.7/site-packages/_modshogun.so
ruby-shogun: /usr/lib64/ruby/vendor_ruby/modshogun.so

Source checksums
----------------
https://github.com/shogun-toolbox/shogun/archive/70e774d7432051e56b0b79554376194c3bf21b12.tar.gz#/shogun-3.1.0-git20131212-70e774d.tar.gz :
  CHECKSUM(SHA256) this package     : 30a5c67bc57c2ccb7ed36eb48d3447381f6630383084af59b39f4b8cfcbe4115
  CHECKSUM(SHA256) upstream package : 30a5c67bc57c2ccb7ed36eb48d3447381f6630383084af59b39f4b8cfcbe4115
https://github.com/shogun-toolbox/shogun-data/archive/39f2ac8143ed6b2018ce5b420b9deb6935b7eb78.tar.gz#/shogun-data-3.1.0-git20131210-39f2ac8.tar.gz :
  CHECKSUM(SHA256) this package     : 67359e99c86bc6730c59c381ebe638499638fb4f1fd6aadc6c2718603703a83c
  CHECKSUM(SHA256) upstream package : 67359e99c86bc6730c59c381ebe638499638fb4f1fd6aadc6c2718603703a83c
http://googlemock.googlecode.com/files/gmock-1.7.0.zip :
  CHECKSUM(SHA256) this package     : 26fcbb5925b74ad5fc8c26b0495dfc96353f4d553492eb97e85a8a6d2f43095b
  CHECKSUM(SHA256) upstream package : 26fcbb5925b74ad5fc8c26b0495dfc96353f4d553492eb97e85a8a6d2f43095b


Generated by fedora-review 0.5.0 (920221d) last change: 2013-08-30
Command line :/usr/bin/fedora-review -v -p -n shogun -m fedora-rawhide-x86_64
Buildroot used: fedora-rawhide-x86_64
Active plugins: Generic, Python, Shell-api, C/C++
Disabled plugins: Java, SugarActivity, Perl, R, PHP, Ruby
Disabled flags: EPEL5, EXARCH, DISTTAG

Comment 6 Björn Esser (besser82) 2013-12-16 19:25:32 UTC
Thanks for the review, Wolfgang!  :D

New Package SCM Request
=======================
Package Name: shogun
Short Description: Large Scale Machine Learning Toolbox
Owners: besser82
Branches: el5 el6 f18 f19 f20
InitialCC: ml-sig

Comment 7 Gwyn Ciesla 2013-12-16 21:09:30 UTC
Git done (by process-git-requests).

No longer creating f18 branches.

Comment 8 Fedora Update System 2013-12-16 23:32:40 UTC
shogun-3.1.0-0.1.git20131212.70e774d.fc19 has been submitted as an update for Fedora 19.
https://admin.fedoraproject.org/updates/shogun-3.1.0-0.1.git20131212.70e774d.fc19

Comment 9 Fedora Update System 2013-12-17 01:03:24 UTC
shogun-3.1.0-0.1.git20131212.70e774d.fc20 has been submitted as an update for Fedora 20.
https://admin.fedoraproject.org/updates/shogun-3.1.0-0.1.git20131212.70e774d.fc20

Comment 10 Fedora Update System 2013-12-17 19:10:39 UTC
shogun-3.1.0-0.1.git20131212.70e774d.fc19 has been pushed to the Fedora 19 stable repository.

Comment 11 Fedora Update System 2013-12-17 19:13:45 UTC
shogun-3.1.0-0.1.git20131212.70e774d.fc20 has been pushed to the Fedora 20 stable repository.

Comment 12 Fedora Update System 2013-12-19 21:45:52 UTC
shogun-3.1.0-0.9.git20131219.207a709.fc20 has been submitted as an update for Fedora 20.
https://admin.fedoraproject.org/updates/shogun-3.1.0-0.9.git20131219.207a709.fc20

Comment 13 Fedora Update System 2013-12-21 02:10:21 UTC
shogun-3.1.0-0.9.git20131219.207a709.fc20 has been pushed to the Fedora 20 stable repository.  If problems still persist, please make note of it in this bug report.


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