Description of problem: It would be good to run the test suite again via: %check make check However, it is currently failing. For e.g. on F20 x86_64 I get: running code in 'reg-S4.R' ... OK comparing 'reg-S4.Rout' to './reg-S4.Rout.save' ... OK running code in 'reg-BLAS.R' ...make[3]: *** [reg-BLAS.Rout] Error 1 make[3]: Leaving directory `/export/home/orion/fedora/R/R-3.0.2/tests' make[2]: *** [test-Reg] Error 2 make[2]: Leaving directory `/export/home/orion/fedora/R/R-3.0.2/tests' make[1]: *** [test-all-basics] Error 1 make[1]: Leaving directory `/export/home/orion/fedora/R/R-3.0.2/tests' make: *** [check] Error 2 Version-Release number of selected component (if applicable): R-3.0.2-3.fc21
Upstream also indicates that using system tre library is causing a failure in regexp tests which we should verify.
BLAS failure seems to be: > ## found from fallback test in slam 0.1-15 > ## most likely indicates an inaedquate BLAS. > x <- matrix(c(1, 0, NA, 1), 2, 2) > y <- matrix(c(1, 0, 0, 2, 1, 0), 3, 2) > (z <- tcrossprod(x, y)) [,1] [,2] [,3] [1,] NA NA 0 [2,] 2 1 0 > stopifnot(identical(z, x %*% t(y))) Error: identical(z, x %*% t(y)) is not TRUE Execution halted Odd thing is I cannot reproduce with the installed rpm, but I can with the build tree.
Correct I believe is: > (z <- tcrossprod(x, y)) [,1] [,2] [,3] [1,] NA NA NA [2,] 2 1 0
This was broken with the addition of --with-blas to configure.
rkward-0.6.1-9.fc20,rpy-2.3.10-2.fc20,R-3.1.1-1.fc20,R-qtl-1.32.10-4.fc20 has been submitted as an update for Fedora 20. https://admin.fedoraproject.org/updates/rkward-0.6.1-9.fc20,rpy-2.3.10-2.fc20,R-3.1.1-1.fc20,R-qtl-1.32.10-4.fc20
rkward-0.6.1-9.fc19,rpy-2.3.10-2.fc19,R-3.1.1-1.fc19,R-qtl-1.32.10-4.fc19 has been submitted as an update for Fedora 19. https://admin.fedoraproject.org/updates/rkward-0.6.1-9.fc19,rpy-2.3.10-2.fc19,R-3.1.1-1.fc19,R-qtl-1.32.10-4.fc19
R-3.1.1-1.el5,R-qtl-1.32.10-4.el5 has been submitted as an update for Fedora EPEL 5. https://admin.fedoraproject.org/updates/R-3.1.1-1.el5,R-qtl-1.32.10-4.el5
R-3.1.1-1.el6,R-qtl-1.32.10-4.el6 has been submitted as an update for Fedora EPEL 6. https://admin.fedoraproject.org/updates/R-3.1.1-1.el6,R-qtl-1.32.10-4.el6
Package rkward-0.6.1-9.fc19, rpy-2.3.10-2.fc19, R-3.1.1-1.fc19, R-qtl-1.32.10-4.fc19: * should fix your issue, * was pushed to the Fedora 19 testing repository, * should be available at your local mirror within two days. Update it with: # su -c 'yum update --enablerepo=updates-testing rkward-0.6.1-9.fc19 rpy-2.3.10-2.fc19 R-3.1.1-1.fc19 R-qtl-1.32.10-4.fc19' as soon as you are able to. Please go to the following url: https://admin.fedoraproject.org/updates/FEDORA-2014-8532/rkward-0.6.1-9.fc19,rpy-2.3.10-2.fc19,R-3.1.1-1.fc19,R-qtl-1.32.10-4.fc19 then log in and leave karma (feedback).
R-3.1.1-1.el5, R-qtl-1.32.10-4.el5 has been pushed to the Fedora EPEL 5 stable repository. If problems still persist, please make note of it in this bug report.
R-3.1.1-1.el6, R-qtl-1.32.10-4.el6 has been pushed to the Fedora EPEL 6 stable repository. If problems still persist, please make note of it in this bug report.
rkward-0.6.1-9.fc19, rpy-2.3.10-2.fc19, R-3.1.1-1.fc19, R-qtl-1.32.10-4.fc19 has been pushed to the Fedora 19 stable repository. If problems still persist, please make note of it in this bug report.
rkward-0.6.1-9.fc20, rpy-2.3.10-2.fc20, R-3.1.1-1.fc20, R-qtl-1.32.10-4.fc20 has been pushed to the Fedora 20 stable repository. If problems still persist, please make note of it in this bug report.