Bug 1110684 - R-java update has new dependencies
Summary: R-java update has new dependencies
Keywords:
Status: CLOSED ERRATA
Alias: None
Product: Fedora EPEL
Classification: Fedora
Component: R
Version: el6
Hardware: All
OS: Linux
unspecified
unspecified
Target Milestone: ---
Assignee: Tom "spot" Callaway
QA Contact: Fedora Extras Quality Assurance
URL:
Whiteboard:
Depends On:
Blocks:
TreeView+ depends on / blocked
 
Reported: 2014-06-18 08:58 UTC by Sven Sternberger
Modified: 2014-11-01 17:12 UTC (History)
5 users (show)

Fixed In Version: R-3.1.1-7.fc21
Clone Of:
Environment:
Last Closed: 2014-10-28 06:40:13 UTC
Type: Bug
Embargoed:


Attachments (Terms of Use)

Description Sven Sternberger 2014-06-18 08:58:56 UTC
Description of problem:
On update R-java with yum gives me a list of packages to newly
install. 

*The machines have installed Oracle-Java and
openjdk rpms. I think java-1.5.0-gcj shouldn't be installed.

* Are the devel packages necessary?

Version-Release number of selected component (if applicable):
3.1.0-5.el6

How reproducible:
yum update R-java

Steps to Reproduce:
1. yum update R-java
2.
3.

Actual results:
Installing for dependencies:
 blas-devel                   x86_64               3.2.1-4.el6                                      sl                 132 k
 java-1.5.0-gcj               x86_64               1.5.0.0-29.1.el6                                 sl                 138 k
 java_cup                     x86_64               1:0.10k-5.el6                                    sl                 196 k
 lapack-devel                 x86_64               3.2.1-4.el6                                      sl                 4.5 M
 libicu-devel                 x86_64               4.2.1-9.1.el6_2                                  sl                 616 k
 sinjdoc                      x86_64               0.5-9.1.el6                                      sl                 704 k
 xz-devel                     x86_64               4.999.9-0.3.beta.20091007git.el6                 sl                  39 k


Expected results:
Not install java-1.5.0-gcj

Additional info:

Comment 1 Orion Poplawski 2014-09-15 15:39:02 UTC
yeah, there doesn't appear to be any reason to explicitly require java-1.5.0-gcj explicitly, should just require java.  Tom - shall I make the change?

Comment 2 Tom "spot" Callaway 2014-09-29 17:55:06 UTC
Yeah. "java" should be a sufficient Requires for that subpackage. If you could go ahead and make that update for all targets, it would be helpful.

Comment 3 Orion Poplawski 2014-09-29 19:11:29 UTC
Tom - I've checked it in and am building for F21/F22, but I don't know how you want to back-port the changes to the other branches, so I'll leave that to someone else.

Comment 4 Nelson Marques 2014-10-02 14:49:36 UTC
People,

I have interest on EL6 on this package. I've removed all the permissions from my FAS account when I retired a few years ago, so I can't make this changes also.

Orion, could you please be kind enough to backport into EL6 and EL5? I do have also some interest in this change. For me to commit this I need probably a new packaging sponsor for a one time change...

According to our in-house dependency check tool, it should be OK for EL5 and EL6.

http://paste.opensuse.org/60696389
http://paste.opensuse.org/14733665


Kindest Regards...

Nelson Marques

Comment 5 Fedora Update System 2014-10-09 15:14:08 UTC
R-3.1.1-7.fc21 has been submitted as an update for Fedora 21.
https://admin.fedoraproject.org/updates/R-3.1.1-7.fc21

Comment 6 Fedora Update System 2014-10-09 15:14:15 UTC
R-3.1.1-7.el6 has been submitted as an update for Fedora EPEL 6.
https://admin.fedoraproject.org/updates/R-3.1.1-7.el6

Comment 7 Fedora Update System 2014-10-09 15:14:21 UTC
R-3.1.1-7.el5 has been submitted as an update for Fedora EPEL 5.
https://admin.fedoraproject.org/updates/R-3.1.1-7.el5

Comment 8 Fedora Update System 2014-10-09 15:14:26 UTC
R-3.1.1-7.el7 has been submitted as an update for Fedora EPEL 7.
https://admin.fedoraproject.org/updates/R-3.1.1-7.el7

Comment 9 Fedora Update System 2014-10-09 15:14:35 UTC
R-3.1.1-7.fc20 has been submitted as an update for Fedora 20.
https://admin.fedoraproject.org/updates/R-3.1.1-7.fc20

Comment 10 Fedora Update System 2014-10-09 15:14:41 UTC
R-3.1.1-7.fc19 has been submitted as an update for Fedora 19.
https://admin.fedoraproject.org/updates/R-3.1.1-7.fc19

Comment 11 Fedora Update System 2014-10-09 19:53:22 UTC
Package R-3.1.1-7.el5:
* should fix your issue,
* was pushed to the Fedora EPEL 5 testing repository,
* should be available at your local mirror within two days.
Update it with:
# su -c 'yum update --enablerepo=epel-testing R-3.1.1-7.el5'
as soon as you are able to.
Please go to the following url:
https://admin.fedoraproject.org/updates/FEDORA-EPEL-2014-3220/R-3.1.1-7.el5
then log in and leave karma (feedback).

Comment 12 Fedora Update System 2014-10-28 06:40:13 UTC
R-3.1.1-7.fc20 has been pushed to the Fedora 20 stable repository.  If problems still persist, please make note of it in this bug report.

Comment 13 Fedora Update System 2014-10-28 06:40:45 UTC
R-3.1.1-7.fc19 has been pushed to the Fedora 19 stable repository.  If problems still persist, please make note of it in this bug report.

Comment 14 Fedora Update System 2014-10-28 11:01:25 UTC
R-3.1.1-7.el5 has been pushed to the Fedora EPEL 5 stable repository.  If problems still persist, please make note of it in this bug report.

Comment 15 Fedora Update System 2014-10-28 11:02:44 UTC
R-3.1.1-7.el7 has been pushed to the Fedora EPEL 7 stable repository.  If problems still persist, please make note of it in this bug report.

Comment 16 Fedora Update System 2014-10-28 11:06:04 UTC
R-3.1.1-7.el6 has been pushed to the Fedora EPEL 6 stable repository.  If problems still persist, please make note of it in this bug report.

Comment 17 Fedora Update System 2014-11-01 17:12:31 UTC
R-3.1.1-7.fc21 has been pushed to the Fedora 21 stable repository.  If problems still persist, please make note of it in this bug report.


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