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Created attachment 1003874 [details] use packaged dssp You might be interested in the packaging for dssp (required for g_do_dssp) which is up for review <https://bugzilla.redhat.com/show_bug.cgi?id=1203749>. It's in production here with the attached patch for gromacs.
Thanks for the patch. This is not something suitable for upstream, but I'll add it to Fedora package.
gromacs-5.0.5-1.fc22 has been submitted as an update for Fedora 22. https://admin.fedoraproject.org/updates/gromacs-5.0.5-1.fc22
Package gromacs-5.0.5-2.fc22: * should fix your issue, * was pushed to the Fedora 22 testing repository, * should be available at your local mirror within two days. Update it with: # su -c 'yum update --enablerepo=updates-testing gromacs-5.0.5-2.fc22' as soon as you are able to. Please go to the following url: https://admin.fedoraproject.org/updates/FEDORA-2015-10259/gromacs-5.0.5-2.fc22 then log in and leave karma (feedback).
gromacs-5.0.5-2.fc22 has been pushed to the Fedora 22 stable repository. If problems still persist, please make note of it in this bug report.