Bug 1221116 - XTandem's test fails on PPC64
Summary: XTandem's test fails on PPC64
Alias: None
Product: Fedora
Classification: Fedora
Component: XTandem
Version: rawhide
Hardware: ppc64
OS: Linux
Target Milestone: ---
Assignee: Antonio
QA Contact: Fedora Extras Quality Assurance
Depends On:
Blocks: F-ExcludeArch-ppc
TreeView+ depends on / blocked
Reported: 2015-05-13 10:14 UTC by Antonio
Modified: 2015-05-26 03:36 UTC (History)
1 user (show)

Fixed In Version: XTandem-150401.1-3.fc22
Doc Type: Bug Fix
Doc Text:
Clone Of:
Last Closed: 2015-05-22 17:57:42 UTC

Attachments (Terms of Use)

Description Antonio 2015-05-13 10:14:06 UTC
Description of problem:

+ ./tandem input.xml
X! P3 Piledriver (2015.04.01.1)
Loading spectra (mgf). loaded.
Spectra matching criteria = 511
Pluggable scoring enabled.
Starting threads . started.
Computing models:
terminate called after throwing an instance of 'std::bad_alloc'
  what():  std::bad_alloc

Version-Release number of selected component (if applicable):

How reproducible:
By building XTandem on EPEL6-->PPC64

Actual results:
I excluded test on PPC64 buildings.

Additional info:
Upstream has not a mind to fix this type of issue.

Comment 1 Dan Horák 2015-05-13 10:27:37 UTC
From http://ppc.koji.fedoraproject.org/koji/taskinfo?taskID=2488494 where it passes the test on the little endian variant of ppc64 I think this is a general problem (not a test problem) with big endian arches, so please excludearch all big endian arches (ppc64, s390, s390x) or make it exclusivearch for little endian arches.

Comment 2 Fedora Update System 2015-05-13 11:04:15 UTC
XTandem-150401.1-3.fc22 has been submitted as an update for Fedora 22.

Comment 3 Fedora Update System 2015-05-13 11:05:25 UTC
XTandem-150401.1-3.fc21 has been submitted as an update for Fedora 21.

Comment 4 Fedora Update System 2015-05-14 11:15:27 UTC
Package XTandem-150401.1-3.fc21:
* should fix your issue,
* was pushed to the Fedora 21 testing repository,
* should be available at your local mirror within two days.
Update it with:
# su -c 'yum update --enablerepo=updates-testing XTandem-150401.1-3.fc21'
as soon as you are able to.
Please go to the following url:
then log in and leave karma (feedback).

Comment 5 Fedora Update System 2015-05-22 17:57:42 UTC
XTandem-150401.1-3.fc21 has been pushed to the Fedora 21 stable repository.  If problems still persist, please make note of it in this bug report.

Comment 6 Fedora Update System 2015-05-26 03:36:05 UTC
XTandem-150401.1-3.fc22 has been pushed to the Fedora 22 stable repository.  If problems still persist, please make note of it in this bug report.

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