Bug 1222300 - seaview FTBFS against latest fltk
Summary: seaview FTBFS against latest fltk
Keywords:
Status: CLOSED RAWHIDE
Alias: None
Product: Fedora
Classification: Fedora
Component: seaview
Version: rawhide
Hardware: Unspecified
OS: Unspecified
unspecified
unspecified
Target Milestone: ---
Assignee: Christian Iseli
QA Contact: Fedora Extras Quality Assurance
URL:
Whiteboard:
Depends On:
Blocks:
TreeView+ depends on / blocked
 
Reported: 2015-05-17 12:51 UTC by Rex Dieter
Modified: 2015-05-30 15:35 UTC (History)
1 user (show)

Fixed In Version:
Clone Of:
Environment:
Last Closed: 2015-05-18 12:54:30 UTC
Type: Bug
Embargoed:


Attachments (Terms of Use)

Description Rex Dieter 2015-05-17 12:51:44 UTC
$Summary says it all, seaview is failing to build against recent versions of fltk,

http://koji.fedoraproject.org/koji/buildinfo?buildID=613110

g++ -o seaview   seaview.o custom.o use_mase_files.o regions.o load_seq.o align.o xfmatpt.o comlines.o resource.o nexus.o viewasprots.o racnuc_fetch.o concatenate.o statistics.o trees.o treedraw.o addbootstrap.o least_squares_brl.o pseudoterminal.o unrooted.o pdf_or_ps.o svg.o threads.o Fl_Native_File_Chooser_FLTK.o raa_acnuc.o parser.o md5.o zsockr.o misc_acnuc.o dnapars.o protpars.o seq.o phylip.o lwl.o bionj.o phyml_util.o  \
       -lfltk_images -lfltk  \
     -lXft -lfontconfig -lXinerama  -ldl \
         -lX11 -lm -lz -lpthread
seaview.o: In function `clipboard_contains_alignment(char const*)':
/builddir/build/BUILD/seaview/seaview.cxx:2270: undefined reference to `fl_selection_buffer'
/builddir/build/BUILD/seaview/seaview.cxx:2270: undefined reference to `fl_selection_buffer'
collect2: error: ld returned 1 exit status

I see upstream has seaview 4.5.4 available on http://doua.prabi.fr/software/seaview, it may be worthy trying to see if this is fixed there already.

Comment 1 Christian Iseli 2015-05-18 12:54:30 UTC
Thanks for the report.  Updating to the latest upstream has fixed the issue.

New upstream pushed to rawhide and successfully built

Comment 2 Rex Dieter 2015-05-18 12:57:08 UTC
FYI, this same FTBFS situation exists for f22/f21 too (I was working on f22/f21 rebuilds for latest fltk when I hit the problem).

Comment 3 Fedora Update System 2015-05-19 08:26:30 UTC
seaview-4.5.4.4-1.fc22 has been submitted as an update for Fedora 22.
https://admin.fedoraproject.org/updates/seaview-4.5.4.4-1.fc22

Comment 4 Fedora Update System 2015-05-19 08:28:05 UTC
seaview-4.5.4.4-1.fc21 has been submitted as an update for Fedora 21.
https://admin.fedoraproject.org/updates/seaview-4.5.4.4-1.fc21

Comment 5 Christian Iseli 2015-05-19 08:31:00 UTC
Ok.  master was merged into f21 and f22 branches, built, and updates in bodhi are pending

Comment 6 Fedora Update System 2015-05-28 12:04:19 UTC
seaview-4.5.4.4-1.fc22 has been pushed to the Fedora 22 stable repository.  If problems still persist, please make note of it in this bug report.

Comment 7 Fedora Update System 2015-05-30 15:35:38 UTC
seaview-4.5.4.4-1.fc21 has been pushed to the Fedora 21 stable repository.  If problems still persist, please make note of it in this bug report.


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