Bug 1307383 - clustal-omega: FTBFS in rawhide
Summary: clustal-omega: FTBFS in rawhide
Keywords:
Status: CLOSED RAWHIDE
Alias: None
Product: Fedora
Classification: Fedora
Component: clustal-omega
Version: rawhide
Hardware: Unspecified
OS: Unspecified
unspecified
unspecified
Target Milestone: ---
Assignee: Mukundan Ragavan
QA Contact: Fedora Extras Quality Assurance
URL:
Whiteboard:
Depends On:
Blocks: F24FTBFS
TreeView+ depends on / blocked
 
Reported: 2016-02-13 21:08 UTC by Fedora Release Engineering
Modified: 2016-02-17 04:17 UTC (History)
2 users (show)

Fixed In Version:
Doc Type: Bug Fix
Doc Text:
Clone Of:
Environment:
Last Closed: 2016-02-17 04:17:17 UTC
Type: ---
Embargoed:

Attachments (Terms of Use)
build.log (93.52 KB, text/plain)
2016-02-13 21:08 UTC, Fedora Release Engineering 		no flags Details
root.log (79.89 KB, text/plain)
2016-02-13 21:08 UTC, Fedora Release Engineering 		no flags Details
state.log (645 bytes, text/plain)
2016-02-13 21:08 UTC, Fedora Release Engineering 		no flags Details
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Description Fedora Release Engineering 2016-02-13 21:08:33 UTC 
Your package clustal-omega failed to build from source in current rawhide.

http://koji.fedoraproject.org/koji/taskinfo?taskID=12809494

For details on mass rebuild see https://fedoraproject.org/wiki/Fedora_24_Mass_Rebuild
Comment 1 Fedora Release Engineering 2016-02-13 21:08:35 UTC 
Created attachment 1124219 [details]
build.log
Comment 2 Fedora Release Engineering 2016-02-13 21:08:36 UTC 
Created attachment 1124220 [details]
root.log
Comment 3 Fedora Release Engineering 2016-02-13 21:08:37 UTC 
Created attachment 1124221 [details]
state.log
Comment 4 Yaakov Selkowitz 2016-02-17 02:51:10 UTC 
src/hhalign/util-C.h defines float log2(float) and float log10(float) inline functions which conflict with those in <math.h>.  (The proper name for these signatures in the C standard library are log2f and log10f.)  Removing those two functions fixes the build (std::log2 and std::log10 are used in their place).
Comment 5 Upstream Release Monitoring 2016-02-17 04:10:07 UTC 
nonamedotc's clustal-omega-1.2.1-9.fc24 completed http://koji.fedoraproject.org/koji/buildinfo?buildID=736472
Comment 6 Mukundan Ragavan 2016-02-17 04:17:17 UTC 
Thanks Yaakov for not just showing me how to fix it, but also for the explanation of what the code does...
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