Bug 1365792 - scorep-openmpi-libs dependencies broke on rhel 7.2 openmpi update
Summary: scorep-openmpi-libs dependencies broke on rhel 7.2 openmpi update
Keywords:
Status: CLOSED ERRATA
Alias: None
Product: Red Hat Enterprise Linux 7
Classification: Red Hat
Component: openmpi
Version: 7.2
Hardware: Unspecified
OS: Unspecified
unspecified
unspecified
Target Milestone: rc
: ---
Assignee: Michal Schmidt
QA Contact: Afom T. Michael
URL:
Whiteboard:
Depends On:
Blocks: 1353018
TreeView+ depends on / blocked
 
Reported: 2016-08-10 08:43 UTC by Tuomo Soini
Modified: 2017-08-01 16:55 UTC (History)
7 users (show)

Fixed In Version: openmpi-1.10.6-1.el7
Doc Type: If docs needed, set a value
Doc Text:
Clone Of:
Environment:
Last Closed: 2017-08-01 16:55:15 UTC
Target Upstream Version:


Attachments (Terms of Use)


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System ID Priority Status Summary Last Updated
Red Hat Product Errata RHEA-2017:2011 normal SHIPPED_LIVE RDMA stack bug fix and enhancement update 2017-08-01 17:59:05 UTC

Description Tuomo Soini 2016-08-10 08:43:08 UTC
package: scorep-openmpi-libs-1.4.2-1.el7.x86_64
unresolved deps: 
     liboshmem.so.8()(64bit)

openmpi-1.10.0-10.el7 does provide file /usr/lib64/openmpi/lib/liboshmem.so.8 but it doesn't have library provides for it. So filtering this requirement out and requiring package openmpi instead might be the fix.

Comment 1 Dave Love 2016-08-10 10:40:39 UTC
This is a bug in the openmpi package and I think it should be re-assigned.
The suppressed provides will affect more than scorep and oshmem users.
The RHEL6 version of openmpi-1.10 doesn't have that problem.

Comment 2 Tuomo Soini 2016-08-10 10:58:49 UTC
On rhel7 package those libraries are especially filtered out from provides as private libraries.

Comment 3 Dave Love 2016-08-10 11:57:38 UTC
(In reply to Tuomo Soini from comment #2)
> On rhel7 package those libraries are especially filtered out from provides
> as private libraries.

As you found, it's not a private library, any more than libmpi is.  The private
bits live in lib/openmpi.  There are other issues with the packaging -- at least
compiler wrappers should be in -devel, but that probably doesn't break anything.

I just thought I should leave it to orion to re-assig as I'm only a co-maintainer.

Comment 4 Orion Poplawski 2016-08-10 15:23:31 UTC
Yeah, looks like the EL7 openmpi spec still has the old openmpi provides filter that excludes liboshmem.  Needs updating.

Comment 6 Dave Love 2016-10-31 10:48:09 UTC
RHEL7 beta doesn't fix this.

Comment 7 Fedora Update System 2016-10-31 15:10:42 UTC
scorep-1.4.2-7.el7 has been submitted as an update to Fedora EPEL 7. https://bodhi.fedoraproject.org/updates/FEDORA-EPEL-2016-0c8997682c

Comment 8 Fedora Update System 2016-11-01 17:48:45 UTC
scorep-1.4.2-7.el7 has been pushed to the Fedora EPEL 7 testing repository. If problems still persist, please make note of it in this bug report.
See https://fedoraproject.org/wiki/QA:Updates_Testing for
instructions on how to install test updates.
You can provide feedback for this update here: https://bodhi.fedoraproject.org/updates/FEDORA-EPEL-2016-0c8997682c

Comment 10 Fedora Update System 2016-11-19 12:48:41 UTC
scorep-1.4.2-7.el7 has been pushed to the Fedora EPEL 7 stable repository. If problems still persist, please make note of it in this bug report.

Comment 11 Michal Schmidt 2017-03-24 15:20:40 UTC
Thanks for the report. I'll copy the RPM deps filter regexps from Fedora.

Comment 14 Afom T. Michael 2017-05-30 17:17:08 UTC
Rephrasing the first sentence:
The description of this BZ isn't clear to me but since openmpi-1.10.6-2.el7.x86_64 is in build RHEL-7.4-20170504.0 and it provides "liboshmem.so.8()(64bit)" as shown below, I'm considering this 'Verified'.
> 
> $ cat /etc/redhat-release 
> Red Hat Enterprise Linux Server release 7.4 Beta (Maipo)
> $ uname -a
> Linux rdma-qe-14 3.10.0-663.el7.x86_64 #1 SMP Tue May 2 16:00:29 EDT 2017
> x86_64 x86_64 x86_64 GNU/Linux
> $ rpm -q openmpi openmpi-devel scorep scorep-openmpi-libs
> openmpi-1.10.6-2.el7.x86_64
> openmpi-devel-1.10.6-2.el7.x86_64
> scorep-1.4.2-7.el7.x86_64
> scorep-openmpi-libs-1.4.2-7.el7.x86_64
> $ ls /usr/lib64/openmpi/lib/liboshmem.so* -l
> lrwxrwxrwx. 1 root root     18 May 26 02:41
> /usr/lib64/openmpi/lib/liboshmem.so -> liboshmem.so.8.1.2
> lrwxrwxrwx. 1 root root     18 May 26 02:37
> /usr/lib64/openmpi/lib/liboshmem.so.8 -> liboshmem.so.8.1.2
> -rwxr-xr-x. 1 root root 327056 Apr 19 08:00
> /usr/lib64/openmpi/lib/liboshmem.so.8.1.2
> $ rpm -qf /usr/lib64/openmpi/lib/liboshmem.so.8.1.2
> /usr/lib64/openmpi/lib/liboshmem.so.8 /usr/lib64/openmpi/lib/liboshmem.so
> openmpi-1.10.6-2.el7.x86_64
> openmpi-1.10.6-2.el7.x86_64
> openmpi-devel-1.10.6-2.el7.x86_64
> $ 
> $ rpm -q --provides openmpi
> config(openmpi) = 1.10.6-2.el7
> libmpi.so.12()(64bit)
> libmpi_cxx.so.1()(64bit)
> libmpi_mpifh.so.12()(64bit)
> libmpi_usempi.so.1()(64bit)
> libmpi_usempi.so.5()(64bit)
> liboshmem.so.8()(64bit)
> libotfaux.so.0()(64bit)
> libvt-hyb.so.0()(64bit)
> libvt-mpi-unify.so.0()(64bit)
> libvt-mpi.so.0()(64bit)
> libvt-mt.so.0()(64bit)
> libvt.so.0()(64bit)
> mpi
> openmpi = 1.10.6-2.el7
> openmpi(x86-64) = 1.10.6-2.el7
> $ 
> $ rpm -q --changelog openmpi
> * Wed Apr 19 2017 Michal Schmidt <mschmidt@redhat.com> - 1.10.6-2
> - Add Chelsio T6 adapter device parameters.
> - Fix License tag format.
> - Resolves: #1435249
> 
> * Fri Mar 24 2017 Michal Schmidt <mschmidt@redhat.com> - 1.10.6-1
> - Update to upstream release 1.10.6.
> - Fix missing RPM provides.
> - Resolves: #1382800
> - Resolves: #1365792
> 
> [...snip...]
> $ 
> $ rpm -q -R openmpi 
> config(openmpi) = 1.10.6-2.el7
> environment-modules
> libc.so.6()(64bit)
> libc.so.6(GLIBC_2.14)(64bit)
> libc.so.6(GLIBC_2.15)(64bit)
> libc.so.6(GLIBC_2.2.5)(64bit)
> libc.so.6(GLIBC_2.3)(64bit)
> libc.so.6(GLIBC_2.3.2)(64bit)
> libc.so.6(GLIBC_2.3.4)(64bit)
> libc.so.6(GLIBC_2.4)(64bit)
> libc.so.6(GLIBC_2.6)(64bit)
> libc.so.6(GLIBC_2.7)(64bit)
> libc.so.6(GLIBC_2.8)(64bit)
> libdl.so.2()(64bit)
> libdl.so.2(GLIBC_2.2.5)(64bit)
> libfabric.so.1()(64bit)
> libfabric.so.1(FABRIC_1.0)(64bit)
> libgcc_s.so.1()(64bit)
> libgcc_s.so.1(GCC_3.0)(64bit)
> libgfortran.so.3()(64bit)
> libhwloc.so.5()(64bit)
> libibverbs.so.1()(64bit)
> libibverbs.so.1(IBVERBS_1.0)(64bit)
> libibverbs.so.1(IBVERBS_1.1)(64bit)
> libm.so.6()(64bit)
> libm.so.6(GLIBC_2.2.5)(64bit)
> libmpi.so.12()(64bit)
> libmpi_mpifh.so.12()(64bit)
> liboshmem.so.8()(64bit)
> libosmcomp.so.3()(64bit)
> libotfaux.so.0()(64bit)
> libpsm2.so.2()(64bit)
> libpsm2.so.2(PSM2_1.0)(64bit)
> libpsm_infinipath.so.1()(64bit)
> libpthread.so.0()(64bit)
> libpthread.so.0(GLIBC_2.2.5)(64bit)
> libpthread.so.0(GLIBC_2.3.2)(64bit)
> libquadmath.so.0()(64bit)
> librdmacm.so.1()(64bit)
> librdmacm.so.1(RDMACM_1.0)(64bit)
> librt.so.1()(64bit)
> librt.so.1(GLIBC_2.2.5)(64bit)
> libstdc++.so.6()(64bit)
> libstdc++.so.6(CXXABI_1.3)(64bit)
> libstdc++.so.6(GLIBCXX_3.4)(64bit)
> libstdc++.so.6(GLIBCXX_3.4.11)(64bit)
> libstdc++.so.6(GLIBCXX_3.4.15)(64bit)
> libstdc++.so.6(GLIBCXX_3.4.9)(64bit)
> libutil.so.1()(64bit)
> libutil.so.1(GLIBC_2.2.5)(64bit)
> libz.so.1()(64bit)
> rpmlib(CompressedFileNames) <= 3.0.4-1
> rpmlib(FileDigests) <= 4.6.0-1
> rpmlib(PayloadFilesHavePrefix) <= 4.0-1
> rtld(GNU_HASH)
> rpmlib(PayloadIsXz) <= 5.2-1
> $

Comment 16 errata-xmlrpc 2017-08-01 16:55:15 UTC
Since the problem described in this bug report should be
resolved in a recent advisory, it has been closed with a
resolution of ERRATA.

For information on the advisory, and where to find the updated
files, follow the link below.

If the solution does not work for you, open a new bug report.

https://access.redhat.com/errata/RHEA-2017:2011


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