Spec URL: https://qulogic.fedorapeople.org//R-ape.spec SRPM URL: https://qulogic.fedorapeople.org//R-ape-5.0-1.fc27.src.rpm Description: Functions for reading, writing, plotting, and manipulating phylogenetic trees, analyses of comparative data in a phylogenetic framework, ancestral character analyses, analyses of diversification and macroevolution, computing distances from DNA sequences, reading and writing nucleotide sequences as well as importing from BioConductor, and several tools such as Mantel's test, generalized skyline plots, graphical exploration of phylogenetic data (alex, trex, kronoviz), estimation of absolute evolutionary rates and clock-like trees using mean path lengths and penalized likelihood, dating trees with non-contemporaneous sequences, translating DNA into AA sequences, and assessing sequence alignments. Phylogeny estimation can be done with the NJ, BIONJ, ME, MVR, SDM, and triangle methods, and several methods handling incomplete distance matrices (NJ*, BIONJ*, MVR*, and the corresponding triangle method). Some functions call external applications (PhyML, Clustal, T-Coffee, Muscle) whose results are returned into R.
This package built on koji: https://koji.fedoraproject.org/koji/taskinfo?taskID=25899219
- Latest version packaged - License ok - Builds in Mock - No rpmlint errors - Conforms to the Packaging Guidelines Package approved.
(fedrepo-req-admin): The Pagure repository was created at https://src.fedoraproject.org/rpms/R-ape
R-ape-5.0-1.fc28 has been submitted as an update to Fedora 28. https://bodhi.fedoraproject.org/updates/FEDORA-2018-19ac32e767
R-ape-5.0-1.fc27 has been submitted as an update to Fedora 27. https://bodhi.fedoraproject.org/updates/FEDORA-2018-f24331298c
R-ape-5.0-1.fc26 has been submitted as an update to Fedora 26. https://bodhi.fedoraproject.org/updates/FEDORA-2018-ffed926ec7
R-ape-5.0-1.fc28 has been pushed to the Fedora 28 testing repository. If problems still persist, please make note of it in this bug report. See https://fedoraproject.org/wiki/QA:Updates_Testing for instructions on how to install test updates. You can provide feedback for this update here: https://bodhi.fedoraproject.org/updates/FEDORA-2018-19ac32e767
R-ape-5.0-1.fc26 has been pushed to the Fedora 26 testing repository. If problems still persist, please make note of it in this bug report. See https://fedoraproject.org/wiki/QA:Updates_Testing for instructions on how to install test updates. You can provide feedback for this update here: https://bodhi.fedoraproject.org/updates/FEDORA-2018-ffed926ec7
R-ape-5.0-1.fc27 has been pushed to the Fedora 27 testing repository. If problems still persist, please make note of it in this bug report. See https://fedoraproject.org/wiki/QA:Updates_Testing for instructions on how to install test updates. You can provide feedback for this update here: https://bodhi.fedoraproject.org/updates/FEDORA-2018-f24331298c
R-ape-5.0-1.fc28 has been pushed to the Fedora 28 stable repository. If problems still persist, please make note of it in this bug report.
R-ape-5.0-1.fc26 has been pushed to the Fedora 26 stable repository. If problems still persist, please make note of it in this bug report.
R-ape-5.0-1.fc27 has been pushed to the Fedora 27 stable repository. If problems still persist, please make note of it in this bug report.