Bug 1759687 - Review Request: python-dijitso - Distributed just-in-time building of shared libraries
Summary: Review Request: python-dijitso - Distributed just-in-time building of shared ...
Keywords:
Status: CLOSED RAWHIDE
Alias: None
Product: Fedora
Classification: Fedora
Component: Package Review
Version: rawhide
Hardware: All
OS: Linux
medium
medium
Target Milestone: ---
Assignee: Ankur Sinha (FranciscoD)
QA Contact: Fedora Extras Quality Assurance
URL:
Whiteboard:
Depends On:
Blocks: 1759715 1759883
TreeView+ depends on / blocked
 
Reported: 2019-10-08 20:24 UTC by Zbigniew Jędrzejewski-Szmek
Modified: 2019-10-09 22:13 UTC (History)
2 users (show)

Fixed In Version: python-dijitso-2019.1.0-1.fc32
Doc Type: If docs needed, set a value
Doc Text:
Clone Of:
Environment:
Last Closed: 2019-10-09 22:13:01 UTC
Type: ---
Embargoed:
sanjay.ankur: fedora-review+


Attachments (Terms of Use)

Description Zbigniew Jędrzejewski-Szmek 2019-10-08 20:24:03 UTC
Spec URL: https://in.waw.pl/~zbyszek/fedora/python-dijitso.spec
SRPM URL: https://in.waw.pl/~zbyszek/fedora/python-dijitso-2019.1.0-1.fc32.src.rpm
Description:
Distributed just-in-time building of shared libraries. This module
was is used internally in the FEniCS framework to provide just in time
compilation of C++ code that is generated from Python modules. It is
only called from within a C++ library, and thus does not need wrapping
in a nice Python interface.

Fedora Account System Username: zbyszek

Comment 1 Zbigniew Jędrzejewski-Szmek 2019-10-08 21:02:47 UTC
koji build:  https://koji.fedoraproject.org/koji/taskinfo?taskID=38152500

Comment 2 Ankur Sinha (FranciscoD) 2019-10-09 11:56:35 UTC
Thanks---putting it through fedora-review now.

Comment 3 Ankur Sinha (FranciscoD) 2019-10-09 12:50:10 UTC
Mock builds fail here:

+ module load mpi/openmpi-x86_64
+ _module_raw load mpi/openmpi-x86_64
+ unset _mlshdbg
+ '[' 0 = 1 ']'
+ unset _mlre _mlIFS
+ '[' -n x ']'
+ _mlIFS=' 	
'
+ IFS=' '
+ for _mlv in ${MODULES_RUN_QUARANTINE:-}
+ '[' LD_LIBRARY_PATH = LD_LIBRARY_PATH -a LD_LIBRARY_PATH = LD_LIBRARY_PATH ']'
++ eval 'echo ${LD_LIBRARY_PATH+x}'
+++ echo x
+ '[' -n x ']'
++ eval 'echo ${LD_LIBRARY_PATH}'
+++ echo /usr/lib64/mpich/lib
+ _mlre='LD_LIBRARY_PATH_modquar='\''/usr/lib64/mpich/lib'\'' '
+ _mlrv=MODULES_RUNENV_LD_LIBRARY_PATH
++ eval 'echo ${MODULES_RUNENV_LD_LIBRARY_PATH:-}'
+++ echo
+ _mlre='LD_LIBRARY_PATH_modquar='\''/usr/lib64/mpich/lib'\'' LD_LIBRARY_PATH='\'''\'' '
+ '[' -n 'LD_LIBRARY_PATH_modquar='\''/usr/lib64/mpich/lib'\'' LD_LIBRARY_PATH='\'''\'' ' ']'
++ eval 'LD_LIBRARY_PATH_modquar='\''/usr/lib64/mpich/lib'\''' 'LD_LIBRARY_PATH='\'''\''' /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh '"$@"'
+++ LD_LIBRARY_PATH_modquar=/usr/lib64/mpich/lib
+++ LD_LIBRARY_PATH=
+++ /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh load mpi/openmpi-x86_64
[?1h=
Loading mpi/openmpi-x86_64
  ERROR: mpi/openmpi-x86_64 cannot be loaded due to a conflict.
    HINT: Might try "module unload mpi" first.


I think we need %_mpich_unload after the tests have run with mpich, before %_openmpi_load?

Comment 4 Ankur Sinha (FranciscoD) 2019-10-09 12:53:40 UTC
Weird how it didn't fail on koji, though. Mock is using the rawhide chroot here.

Comment 5 Zbigniew Jędrzejewski-Szmek 2019-10-09 13:03:40 UTC
Yeah, it didn't fail for me either. I'll add  %_openmpi_unload.

Comment 6 Zbigniew Jędrzejewski-Szmek 2019-10-09 13:06:06 UTC
Updated in place.

Comment 7 Ankur Sinha (FranciscoD) 2019-10-09 14:31:30 UTC
Looks good. A few notes, but none of them are blockers: XXXXX APPROVED XXXXX

- /usr/bin -> %{_bindir} in %files

- you've downloaded the gpg signature, were you planning to verify the source?
  https://docs.fedoraproject.org/en-US/packaging-guidelines/#_verifying_signatures

- the tar does seem to include the docs---please consider generating them and
  adding a -doc sub package.


Package Review
==============

Legend:
[x] = Pass, [!] = Fail, [-] = Not applicable, [?] = Not evaluated
[ ] = Manual review needed


===== MUST items =====

Generic:
[x]: Package is licensed with an open-source compatible license and meets
     other legal requirements as defined in the legal section of Packaging
     Guidelines.
[x]: License field in the package spec file matches the actual license.
     Note: There is no build directory. Running licensecheck on vanilla
     upstream sources. Licenses found: "Unknown or generated". 2 files have
     unknown license. Detailed output of licensecheck in
     /home/asinha/dump/fedora-reviews/1759687-python-
     dijitso/licensecheck.txt
[x]: Package does not own files or directories owned by other packages.
[x]: %build honors applicable compiler flags or justifies otherwise.
[x]: Package contains no bundled libraries without FPC exception.
[x]: Changelog in prescribed format.
[x]: Sources contain only permissible code or content.
[-]: Package contains desktop file if it is a GUI application.
[-]: Development files must be in a -devel package
[x]: Package uses nothing in %doc for runtime.
[ ]: Package consistently uses macros (instead of hard-coded directory
     names).
[x]: Package is named according to the Package Naming Guidelines.
[x]: Package does not generate any conflict.
[x]: Package obeys FHS, except libexecdir and /usr/target.
[-]: If the package is a rename of another package, proper Obsoletes and
     Provides are present.
[x]: Requires correct, justified where necessary.
[x]: Spec file is legible and written in American English.
[-]: Package contains systemd file(s) if in need.
[x]: Package is not known to require an ExcludeArch tag.
[-]: Large documentation must go in a -doc subpackage. Large could be size
     (~1MB) or number of files.
     Note: Documentation size is 10240 bytes in 1 files.
[x]: Package complies to the Packaging Guidelines
[x]: Package successfully compiles and builds into binary rpms on at least
     one supported primary architecture.
[x]: Package installs properly.
[x]: Rpmlint is run on all rpms the build produces.
     Note: No rpmlint messages.
[x]: If (and only if) the source package includes the text of the
     license(s) in its own file, then that file, containing the text of the
     license(s) for the package is included in %license.
[x]: Package requires other packages for directories it uses.
[x]: Package must own all directories that it creates.
[x]: Package uses either %{buildroot} or $RPM_BUILD_ROOT
[x]: Package does not run rm -rf %{buildroot} (or $RPM_BUILD_ROOT) at the
     beginning of %install.
[x]: Macros in Summary, %description expandable at SRPM build time.
[x]: Dist tag is present.
[x]: Package does not contain duplicates in %files.
[x]: Permissions on files are set properly.
[x]: Package must not depend on deprecated() packages.
[x]: Package use %makeinstall only when make install DESTDIR=... doesn't
     work.
[x]: Package is named using only allowed ASCII characters.
[x]: Package does not use a name that already exists.
[x]: Package is not relocatable.
[x]: Sources used to build the package match the upstream source, as
     provided in the spec URL.
[x]: Spec file name must match the spec package %{name}, in the format
     %{name}.spec.
[x]: File names are valid UTF-8.
[x]: Packages must not store files under /srv, /opt or /usr/local

Python:
[x]: Binary eggs must be removed in %prep
[x]: Python eggs must not download any dependencies during the build
     process.
[x]: A package which is used by another package via an egg interface should
     provide egg info.
[x]: Package meets the Packaging Guidelines::Python
[x]: Package contains BR: python2-devel or python3-devel
[x]: Packages MUST NOT have dependencies (either build-time or runtime) on
     packages named with the unversioned python- prefix unless no properly
     versioned package exists. Dependencies on Python packages instead MUST
     use names beginning with python2- or python3- as appropriate.
[x]: Python packages must not contain %{pythonX_site(lib|arch)}/* in %files

===== SHOULD items =====

Generic:
[-]: If the source package does not include license text(s) as a separate
     file from upstream, the packager SHOULD query upstream to include it.
[x]: Final provides and requires are sane (see attachments).
[?]: Package functions as described.
^
Not tested, but tests all pass.

[x]: Latest version is packaged.
[x]: Package does not include license text files separate from upstream.
[-]: Sources are verified with gpgverify first in %prep if upstream
     publishes signatures.
     Note: gpgverify is not used.
[-]: Description and summary sections in the package spec file contains
     translations for supported Non-English languages, if available.
[x]: Package should compile and build into binary rpms on all supported
     architectures.
[x]: %check is present and all tests pass.
[x]: Packages should try to preserve timestamps of original installed
     files.
[x]: Reviewer should test that the package builds in mock.
[x]: Buildroot is not present
[x]: Package has no %clean section with rm -rf %{buildroot} (or
     $RPM_BUILD_ROOT)
[x]: No file requires outside of /etc, /bin, /sbin, /usr/bin, /usr/sbin.
[x]: Packager, Vendor, PreReq, Copyright tags should not be in spec file
[x]: Sources can be downloaded from URI in Source: tag
[x]: SourceX is a working URL.
[x]: Spec use %global instead of %define unless justified.

===== EXTRA items =====

Generic:
[x]: Rpmlint is run on all installed packages.
     Note: There are rpmlint messages (see attachment).
[x]: Spec file according to URL is the same as in SRPM.


Rpmlint
-------
Checking: python3-dijitso-2019.1.0-1.fc31.noarch.rpm
          python-dijitso-2019.1.0-1.fc31.src.rpm
2 packages and 0 specfiles checked; 0 errors, 0 warnings.




Rpmlint (installed packages)
----------------------------
perl: warning: Setting locale failed.
perl: warning: Please check that your locale settings:
	LANGUAGE = (unset),
	LC_ALL = (unset),
	LC_CTYPE = "C.UTF-8",
	LANG = "en_GB.utf8"
    are supported and installed on your system.
perl: warning: Falling back to the standard locale ("C").
perl: warning: Setting locale failed.
perl: warning: Please check that your locale settings:
	LANGUAGE = (unset),
	LC_ALL = (unset),
	LC_CTYPE = "C.UTF-8",
	LANG = "en_GB.utf8"
    are supported and installed on your system.
perl: warning: Falling back to the standard locale ("C").
python3-dijitso.noarch: W: invalid-url URL: https://fenics-dijitso.readthedocs.org/ <urlopen error [Errno -2] Name or service not known>
^ False positive---works.

1 packages and 0 specfiles checked; 0 errors, 1 warnings.



Source checksums
----------------
https://bitbucket.org/fenics-project/dijitso/downloads/dijitso-2019.1.0.tar.gz.asc :
  CHECKSUM(SHA256) this package     : fbb6273ab66b8bef6c6bf28873d95ab10c59206f23eb9ab6cf5ac5c27f467747
  CHECKSUM(SHA256) upstream package : fbb6273ab66b8bef6c6bf28873d95ab10c59206f23eb9ab6cf5ac5c27f467747
https://bitbucket.org/fenics-project/dijitso/downloads/dijitso-2019.1.0.tar.gz :
  CHECKSUM(SHA256) this package     : eaa45eec4457f3f865d72a926b7cba86df089410e78de04cd89b15bb405e8fd9
  CHECKSUM(SHA256) upstream package : eaa45eec4457f3f865d72a926b7cba86df089410e78de04cd89b15bb405e8fd9


Requires
--------
python3-dijitso (rpmlib, GLIBC filtered):
    /usr/bin/python3
    gcc-c++
    python(abi)
    python3-mpi4py-runtime
    python3.8dist(numpy)
    python3.8dist(setuptools)



Provides
--------
python3-dijitso:
    python3-dijitso
    python3.8dist(fenics-dijitso)
    python3dist(fenics-dijitso)



Generated by fedora-review 0.7.3 (44b83c7) last change: 2019-09-18
Command line :/usr/bin/fedora-review -b 1759687
Buildroot used: fedora-rawhide-{{ target_arch }}
Active plugins: Python, Shell-api, Generic
Disabled plugins: PHP, Ocaml, R, fonts, SugarActivity, Java, C/C++, Haskell, Perl
Disabled flags: EPEL6, EPEL7, DISTTAG, BATCH, EXARCH

Comment 8 Zbigniew Jędrzejewski-Szmek 2019-10-09 18:13:23 UTC
Thank you for the review.

> - /usr/bin -> %{_bindir} in %files

Done.

> - you've downloaded the gpg signature, were you planning to verify the source?
>   https://docs.fedoraproject.org/en-US/packaging-guidelines/#_verifying_signatures

Done.

- the tar does seem to include the docs---please consider generating them and
  adding a -doc sub package.

Yeah, I didn't want to do this. It's usually a lot of work, and I don't think anyone's
going to use this, since the online docs are easily accessible. If somebody requests
this, I'll add it.

Comment 9 Gwyn Ciesla 2019-10-09 18:49:24 UTC
(fedscm-admin):  The Pagure repository was created at https://src.fedoraproject.org/rpms/python-dijitso


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