Bug 1892171 - Exit 127 paraview: symbol lookup error: /usr/lib64/openmpi/bin/../lib/paraview/libvtkIOExodus.so.1: undefined symbol: _ZN3MPI8Datatype4FreeEv
Summary: Exit 127 paraview: symbol lookup error: /usr/lib64/openmpi/bin/../lib/paravie...
Keywords:
Status: CLOSED ERRATA
Alias: None
Product: Fedora
Classification: Fedora
Component: paraview
Version: 32
Hardware: x86_64
OS: Linux
unspecified
urgent
Target Milestone: ---
Assignee: Orion Poplawski
QA Contact: Fedora Extras Quality Assurance
URL:
Whiteboard:
Depends On:
Blocks:
TreeView+ depends on / blocked
 
Reported: 2020-10-28 05:28 UTC by Phil V
Modified: 2020-11-11 01:20 UTC (History)
4 users (show)

Fixed In Version: paraview-5.8.1-4.fc33 paraview-5.8.1-4.fc32
Doc Type: If docs needed, set a value
Doc Text:
Clone Of:
Environment:
Last Closed: 2020-11-11 01:19:37 UTC
Type: Bug
Embargoed:


Attachments (Terms of Use)

Description Phil V 2020-10-28 05:28:57 UTC
Description of problem:

Running 'paraview &' or even 'paraview --help' results in the following error:

paraview: symbol lookup error: /usr/lib64/openmpi/bin/../lib/paraview/libvtkIOExodus.so.1: undefined symbol: _ZN3MPI8Datatype4FreeEv
[1]+  Exit 127                paraview



Version-Release number of selected component (if applicable):

> which paraview
/usr/lib64/openmpi/bin/paraview

paraview
Version      : 5.8.0
Release      : 9.fc32
Architecture : x86_64
Size         : 218 M
Source       : paraview-5.8.0-9.fc32.src.rpm

 paraview-devel                                         x86_64                              5.8.0-9.fc32                                          updates                               14 M
 paraview-doc                                           noarch                              5.8.0-9.fc32                                          updates                              525 k
 paraview-openmpi                                       x86_64                              5.8.0-9.fc32                                          updates                               44 M



How reproducible:   100%

Steps to Reproduce:
1. module load mpi/openmpi-x86_64
2. paraview &
3. paraview --help

Actual results:

paraview: symbol lookup error: /usr/lib64/openmpi/bin/../lib/paraview/libvtkIOExodus.so.1: undefined symbol: _ZN3MPI8Datatype4FreeEv
[1]+  Exit 127                paraview
paraview: symbol lookup error: /usr/lib64/openmpi/bin/../lib/paraview/libvtkIOExodus.so.1: undefined symbol: _ZN3MPI8Datatype4FreeEv
Expected results:

Paraview runs

Additional info:

Paraview can be started from the KDE Application Launcher. 
Where would any error messages be logged?

Comment 1 Phil V 2020-10-28 05:36:38 UTC
This fails:

/usr/lib64/openmpi/bin/paraview

This succeeds:

/usr/bin/paraview

Comment 2 Orion Poplawski 2020-11-01 17:35:01 UTC
Working on a fix...

Comment 3 Fedora Update System 2020-11-02 14:48:29 UTC
FEDORA-2020-bf797c94c7 has been submitted as an update to Fedora 33. https://bodhi.fedoraproject.org/updates/FEDORA-2020-bf797c94c7

Comment 4 Fedora Update System 2020-11-02 14:48:31 UTC
FEDORA-2020-ef32a78e7d has been submitted as an update to Fedora 32. https://bodhi.fedoraproject.org/updates/FEDORA-2020-ef32a78e7d

Comment 5 Fedora Update System 2020-11-03 02:25:52 UTC
FEDORA-2020-bf797c94c7 has been pushed to the Fedora 33 testing repository.
In short time you'll be able to install the update with the following command:
`sudo dnf upgrade --enablerepo=updates-testing --advisory=FEDORA-2020-bf797c94c7`
You can provide feedback for this update here: https://bodhi.fedoraproject.org/updates/FEDORA-2020-bf797c94c7

See also https://fedoraproject.org/wiki/QA:Updates_Testing for more information on how to test updates.

Comment 6 Fedora Update System 2020-11-03 02:26:36 UTC
FEDORA-2020-ef32a78e7d has been pushed to the Fedora 32 testing repository.
In short time you'll be able to install the update with the following command:
`sudo dnf upgrade --enablerepo=updates-testing --advisory=FEDORA-2020-ef32a78e7d`
You can provide feedback for this update here: https://bodhi.fedoraproject.org/updates/FEDORA-2020-ef32a78e7d

See also https://fedoraproject.org/wiki/QA:Updates_Testing for more information on how to test updates.

Comment 7 Fedora Update System 2020-11-11 01:19:37 UTC
FEDORA-2020-bf797c94c7 has been pushed to the Fedora 33 stable repository.
If problem still persists, please make note of it in this bug report.

Comment 8 Fedora Update System 2020-11-11 01:20:57 UTC
FEDORA-2020-ef32a78e7d has been pushed to the Fedora 32 stable repository.
If problem still persists, please make note of it in this bug report.


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