Bug 1948404 - F35FailsToInstall: python3-hdmf
Summary: F35FailsToInstall: python3-hdmf
Alias: None
Product: Fedora
Classification: Fedora
Component: python-hdmf
Version: 35
Hardware: Unspecified
OS: Unspecified
Target Milestone: ---
Assignee: Luis Bazan
QA Contact: Ankur Sinha (FranciscoD)
Depends On:
Blocks: F35FailsToInstall F36FailsToInstall 1948573
TreeView+ depends on / blocked
Reported: 2021-04-12 06:52 UTC by Miro Hrončok
Modified: 2021-08-16 19:35 UTC (History)
3 users (show)

Fixed In Version: python-hdmf-3.1.1-1.fc35
Doc Type: If docs needed, set a value
Doc Text:
Clone Of:
Last Closed: 2021-08-16 19:35:01 UTC
Type: ---

Attachments (Terms of Use)

System ID Private Priority Status Summary Last Updated
Github hdmf-dev hdmf issues 458 0 None open Add support for h5py 3 2021-04-12 11:08:45 UTC
Github hdmf-dev hdmf pull 480 0 None open update HDMF to work with h5py 3.x 2021-04-19 17:38:05 UTC

Description Miro Hrončok 2021-04-12 06:52:56 UTC

Please note that this comment was generated automatically. If you feel that this output has mistakes, please contact me via email (mhroncok@redhat.com).

Your package (python-hdmf) Fails To Install in Fedora 35:

can't install python3-hdmf:
  - nothing provides (python3.9dist(h5py) < 3 with python3.9dist(h5py) >= 2.9) needed by python3-hdmf-2.4.0-2.fc35.noarch
  - nothing provides (python3.9dist(numpy) < 1.19.4 with python3.9dist(numpy) >= 1.16) needed by python3-hdmf-2.4.0-2.fc35.noarch
If you know about this problem and are planning on fixing it, please acknowledge so by setting the bug status to ASSIGNED. If you don't have time to maintain this package, consider orphaning it, so maintainers of dependent packages realize the problem.

If you don't react accordingly to the policy for FTBFS/FTI bugs (https://docs.fedoraproject.org/en-US/fesco/Fails_to_build_from_source_Fails_to_install/), your package may be orphaned in 8+ weeks.

P.S. The data was generated solely from koji buildroot, so it might be newer than the latest compose or the content on mirrors.

P.P.S. If this bug has been reported in the middle of upgrading multiple dependent packages, please consider using side tags: https://docs.fedoraproject.org/en-US/fesco/Updates_Policy/#updating-inter-dependent-packages


Comment 1 Ankur Sinha (FranciscoD) 2021-04-12 11:08:49 UTC
hdmf does not yet support h5py 3.x. This is being worked on upstream: https://github.com/hdmf-dev/hdmf/issues/458

Comment 2 Ankur Sinha (FranciscoD) 2021-04-19 17:38:09 UTC
There's a PR in progress here, as soon as it's merged, we can build the snapshot to fix this.


Comment 3 Ben Cotton 2021-08-10 12:58:25 UTC
This bug appears to have been reported against 'rawhide' during the Fedora 35 development cycle.
Changing version to 35.

Comment 4 Ankur Sinha (FranciscoD) 2021-08-16 19:35:01 UTC
Should be fixed now.

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