Bug 2025024 - Review Request: python-ukkonen - Implementation of bounded Levenshtein distance (Ukkonen)
Summary: Review Request: python-ukkonen - Implementation of bounded Levenshtein distan...
Keywords:
Status: CLOSED RAWHIDE
Alias: None
Product: Fedora
Classification: Fedora
Component: Package Review
Version: rawhide
Hardware: Unspecified
OS: Unspecified
unspecified
unspecified
Target Milestone: ---
Assignee: Ben Beasley
QA Contact: Fedora Extras Quality Assurance
URL:
Whiteboard:
Depends On:
Blocks: 2024780
TreeView+ depends on / blocked
 
Reported: 2021-11-19 17:54 UTC by Gwyn Ciesla
Modified: 2021-12-06 22:23 UTC (History)
2 users (show)

Fixed In Version:
Doc Type: If docs needed, set a value
Doc Text:
Clone Of:
Environment:
Last Closed: 2021-12-06 22:23:02 UTC
Type: Bug
Embargoed:
code: fedora-review+


Attachments (Terms of Use)

Description Gwyn Ciesla 2021-11-19 17:54:24 UTC
Description:

Implementation of bounded Levenshtein distance (Ukkonen)

SPEC: https://fedorapeople.org/~limb/review/python-ukkonen/python-ukkonen.spec
SRPM: https://fedorapeople.org/~limb/review/python-ukkonen/python-ukkonen-1.0.1-1.fc35.src.rpm

Comment 1 Ben Beasley 2021-11-28 21:28:07 UTC
Package Review
==============

Legend:
[x] = Pass, [!] = Fail, [-] = Not applicable, [?] = Not evaluated


Issues:
=======
- Package does not contain duplicates in %files.
  Note: warning: File listed twice:
  /usr/share/licenses/python3-ukkonen/LICENSE
  See: https://docs.fedoraproject.org/en-US/packaging-
  guidelines/#_duplicate_files

  The top-level license file is the current package license file. The one in
  licenses/ is the one for the original JavaScript implementation,
  https://github.com/sunesimonsen/ukkonen. Unfortunately, since both files have
  the same name, they are both installed as
  /usr/share/licenses/python3-ukkonen/LICENSE, and so in the end, only one is
  installed.

  Suggested fix: in %prep:

    cp -p licenses/LICENSE LICENSE-upstream

  In %files:

    %license LICENSE LICENSE-upstream

- Omitting the first argument of %pypi_source is deprecated, so

    Source0:        %{pypi_source}

  is better written:

    Source0:        %{pypi_source ukkonen}

  or, if you want to keep using the pypi_name macro,

    Source0:        %{pypi_source %{pypi_name}}

  https://docs.fedoraproject.org/en-US/packaging-guidelines/Python/#_convenience_macros

- The pypi_version macro provides nothing useful compared to:

    Version:        1.0.1

  and using %{version} everywhere %{pypi_version} is currently used.

  There’s no reason you can’t use it, but it’s an unnecessary layer of
  indirection.

  Changing this is not required for approval.

- Upstream provides tests in the GitHub release. Consider:

    Source0:        %{url}/archive/v%{version}/ukkonen-%{version}.tar.gz

  and:

    BuildRequires:  python3dist(pytest)

  and:

    %check
    %pytest

- The python_provide macro is obsolete in all Fedora Releases. Please remove:

    %{?python_provide:%python_provide python3-%{pypi_name}}

- This shouldn’t be needed; the dependency should be automatically generated
  based on install_requires in setup.cfg.

    Requires:       python3dist(cffi) >= 1

- Are you interested in converting this to the “new Python guidelines”
  (pyproject-rpm-macros)? It would simplify the spec file even more. If so,
  I’m happy to send a PR after import.

===== MUST items =====

C/C++:
[x]: Package does not contain kernel modules.
[x]: Package contains no static executables.
[x]: Development (unversioned) .so files in -devel subpackage, if present.
     Note: Unversioned so-files in private %_libdir subdirectory (see
     attachment). Verify they are not in ld path.

     The only unversioned .so is a properly-installed compiled Python extension
     module.

[x]: If your application is a C or C++ application you must list a
     BuildRequires against gcc, gcc-c++ or clang.
[x]: Header files in -devel subpackage, if present.
[x]: Package does not contain any libtool archives (.la)
[x]: Rpath absent or only used for internal libs.

Generic:
[x]: Package is licensed with an open-source compatible license and meets
     other legal requirements as defined in the legal section of Packaging
     Guidelines.
[x]: License field in the package spec file matches the actual license.
     Note: Checking patched sources after %prep for licenses. Licenses
     found: "MIT License", "Unknown or generated", "*No copyright* MIT
     License". 7 files have unknown license. Detailed output of
     licensecheck in /home/reviewer/2025024-python-ukkonen/licensecheck.txt
[!]: License file installed when any subpackage combination is installed.

     Only one of the two license files is installed because they have the same
     basename. See Issues.

[x]: %build honors applicable compiler flags or justifies otherwise.
[x]: Package contains no bundled libraries without FPC exception.
[x]: Changelog in prescribed format.
[x]: Sources contain only permissible code or content.
[-]: Package contains desktop file if it is a GUI application.
[-]: Development files must be in a -devel package
[x]: Package uses nothing in %doc for runtime.
[x]: Package consistently uses macros (instead of hard-coded directory
     names).
[x]: Package is named according to the Package Naming Guidelines.
[x]: Package does not generate any conflict.
[x]: Package obeys FHS, except libexecdir and /usr/target.
[-]: If the package is a rename of another package, proper Obsoletes and
     Provides are present.
[x]: Requires correct, justified where necessary.
[x]: Spec file is legible and written in American English.
[-]: Package contains systemd file(s) if in need.
[x]: Useful -debuginfo package or justification otherwise.
[x]: Package is not known to require an ExcludeArch tag.
[-]: Large documentation must go in a -doc subpackage. Large could be size
     (~1MB) or number of files.
     Note: Documentation size is 10240 bytes in 1 files.
[x]: Package complies to the Packaging Guidelines
[x]: Package successfully compiles and builds into binary rpms on at least
     one supported primary architecture.
[x]: Package installs properly.
[x]: Rpmlint is run on all rpms the build produces.
     Note: There are rpmlint messages (see attachment).
[x]: If (and only if) the source package includes the text of the
     license(s) in its own file, then that file, containing the text of the
     license(s) for the package is included in %license.
[x]: Package requires other packages for directories it uses.
[x]: Package must own all directories that it creates.
[x]: Package does not own files or directories owned by other packages.
[x]: Package uses either %{buildroot} or $RPM_BUILD_ROOT
[x]: Package does not run rm -rf %{buildroot} (or $RPM_BUILD_ROOT) at the
     beginning of %install.
[x]: Macros in Summary, %description expandable at SRPM build time.
[x]: Dist tag is present.
[x]: Permissions on files are set properly.
[x]: Package must not depend on deprecated() packages.
[x]: Package use %makeinstall only when make install DESTDIR=... doesn't
     work.
[x]: Package is named using only allowed ASCII characters.
[x]: Package does not use a name that already exists.
[x]: Package is not relocatable.
[x]: Sources used to build the package match the upstream source, as
     provided in the spec URL.
[x]: Spec file name must match the spec package %{name}, in the format
     %{name}.spec.
[x]: File names are valid UTF-8.
[x]: Packages must not store files under /srv, /opt or /usr/local

Python:
[x]: Python eggs must not download any dependencies during the build
     process.
[x]: A package which is used by another package via an egg interface should
     provide egg info.
[x]: Package meets the Packaging Guidelines::Python
[x]: Package contains BR: python2-devel or python3-devel
[x]: Packages MUST NOT have dependencies (either build-time or runtime) on
     packages named with the unversioned python- prefix unless no properly
     versioned package exists. Dependencies on Python packages instead MUST
     use names beginning with python2- or python3- as appropriate.
[x]: Python packages must not contain %{pythonX_site(lib|arch)}/* in %files
[x]: Binary eggs must be removed in %prep

===== SHOULD items =====

Generic:
[-]: If the source package does not include license text(s) as a separate
     file from upstream, the packager SHOULD query upstream to include it.
[x]: Final provides and requires are sane (see attachments).
[-]: Fully versioned dependency in subpackages if applicable.
     Note: No Requires: %{name}%{?_isa} = %{version}-%{release} in
     python3-ukkonen
[?]: Package functions as described.
[x]: Latest version is packaged.
[x]: Package does not include license text files separate from upstream.
[-]: Sources are verified with gpgverify first in %prep if upstream
     publishes signatures.
     Note: gpgverify is not used.
[-]: Description and summary sections in the package spec file contains
     translations for supported Non-English languages, if available.
[x]: Package should compile and build into binary rpms on all supported
     architectures.
[!]: %check is present and all tests pass.
[x]: Packages should try to preserve timestamps of original installed
     files.
[x]: Reviewer should test that the package builds in mock.
[x]: Buildroot is not present
[x]: Package has no %clean section with rm -rf %{buildroot} (or
     $RPM_BUILD_ROOT)
[x]: No file requires outside of /etc, /bin, /sbin, /usr/bin, /usr/sbin.
[x]: Packager, Vendor, PreReq, Copyright tags should not be in spec file
[x]: Sources can be downloaded from URI in Source: tag
[x]: SourceX is a working URL.
[x]: Spec use %global instead of %define unless justified.

===== EXTRA items =====

Generic:
[x]: Rpmlint is run on all installed packages.
     Note: There are rpmlint messages (see attachment).
[x]: Large data in /usr/share should live in a noarch subpackage if package
     is arched.
[x]: Spec file according to URL is the same as in SRPM.


Rpmlint
-------
Cannot parse rpmlint output:


Rpmlint (installed packages)
----------------------------
Cannot parse rpmlint output:


Unversioned so-files
--------------------
python3-ukkonen: /usr/lib64/python3.10/site-packages/_ukkonen.abi3.so

Source checksums
----------------
https://files.pythonhosted.org/packages/source/u/ukkonen/ukkonen-1.0.1.tar.gz :
  CHECKSUM(SHA256) this package     : 976ad9a991c9cb99a7c318695a5f6b46236bbd4c33c5b55273fa241dfca8e0fa
  CHECKSUM(SHA256) upstream package : 976ad9a991c9cb99a7c318695a5f6b46236bbd4c33c5b55273fa241dfca8e0fa


Requires
--------
python3-ukkonen (rpmlib, GLIBC filtered):
    libc.so.6()(64bit)
    libgcc_s.so.1()(64bit)
    libgcc_s.so.1(GCC_3.0)(64bit)
    libstdc++.so.6()(64bit)
    libstdc++.so.6(CXXABI_1.3)(64bit)
    libstdc++.so.6(CXXABI_1.3.9)(64bit)
    python(abi)
    python3.10dist(cffi)
    python3dist(cffi)
    rtld(GNU_HASH)

python-ukkonen-debugsource (rpmlib, GLIBC filtered):



Provides
--------
python3-ukkonen:
    python-ukkonen
    python3-ukkonen
    python3-ukkonen(x86-64)
    python3.10-ukkonen
    python3.10dist(ukkonen)
    python3dist(ukkonen)

python-ukkonen-debugsource:
    python-ukkonen-debugsource
    python-ukkonen-debugsource(x86-64)



Generated by fedora-review 0.7.6 (b083f91) last change: 2020-11-10
Command line :/usr/bin/fedora-review -b 2025024
Buildroot used: fedora-rawhide-x86_64
Active plugins: Generic, C/C++, Shell-api, Python
Disabled plugins: Ocaml, R, Perl, SugarActivity, Haskell, fonts, PHP, Java
Disabled flags: EPEL6, EPEL7, DISTTAG, BATCH, EXARCH

Comment 2 Gwyn Ciesla 2021-11-30 22:35:55 UTC
Yes, please! This was a quick-and dirty pypy2rpm, and it shows. :)

Updated.

SPEC: https://fedorapeople.org/~limb/review/python-ukkonen/python-ukkonen.spec
SRPM: https://fedorapeople.org/~limb/review/python-ukkonen/python-ukkonen-1.0.1-2.fc35.src.rpm

Comment 3 Ben Beasley 2021-12-06 14:30:35 UTC
Sorry for the delay! This looks good now, and the package is approved. A full-re-review is below. All rpmlint messages appear spurious.

Package Review
==============

Legend:
[x] = Pass, [!] = Fail, [-] = Not applicable, [?] = Not evaluated



===== MUST items =====

C/C++:
[x]: Package does not contain kernel modules.
[x]: Package contains no static executables.
[x]: Development (unversioned) .so files in -devel subpackage, if present.
     Note: Unversioned so-files in private %_libdir subdirectory (see
     attachment). Verify they are not in ld path.

     The only unversioned .so file is a properly-installed compiled Python
     extension module.

[x]: If your application is a C or C++ application you must list a
     BuildRequires against gcc, gcc-c++ or clang.
[x]: Header files in -devel subpackage, if present.
[x]: Package does not contain any libtool archives (.la)
[x]: Rpath absent or only used for internal libs.

Generic:
[x]: Package is licensed with an open-source compatible license and meets
     other legal requirements as defined in the legal section of Packaging
     Guidelines.
[x]: License field in the package spec file matches the actual license.
     Note: Checking patched sources after %prep for licenses. Licenses
     found: "Unknown or generated", "MIT License", "*No copyright* MIT
     License". 13 files have unknown license. Detailed output of
     licensecheck in /home/reviewer/2025024-python-
     ukkonen/20211205/2025024-python-ukkonen/licensecheck.txt
[x]: License file installed when any subpackage combination is installed.
[x]: %build honors applicable compiler flags or justifies otherwise.
[x]: Package contains no bundled libraries without FPC exception.
[x]: Changelog in prescribed format.
[x]: Sources contain only permissible code or content.
[-]: Package contains desktop file if it is a GUI application.
[-]: Development files must be in a -devel package
[x]: Package uses nothing in %doc for runtime.
[x]: Package consistently uses macros (instead of hard-coded directory
     names).
[x]: Package is named according to the Package Naming Guidelines.
[x]: Package does not generate any conflict.
[x]: Package obeys FHS, except libexecdir and /usr/target.
[-]: If the package is a rename of another package, proper Obsoletes and
     Provides are present.
[x]: Requires correct, justified where necessary.
[x]: Spec file is legible and written in American English.
[-]: Package contains systemd file(s) if in need.
[x]: Useful -debuginfo package or justification otherwise.
[x]: Package is not known to require an ExcludeArch tag.
[-]: Large documentation must go in a -doc subpackage. Large could be size
     (~1MB) or number of files.
     Note: Documentation size is 10240 bytes in 1 files.
[x]: Package complies to the Packaging Guidelines
[x]: Package successfully compiles and builds into binary rpms on at least
     one supported primary architecture.
[x]: Package installs properly.
[x]: Rpmlint is run on all rpms the build produces.
     Note: There are rpmlint messages (see attachment).
[x]: If (and only if) the source package includes the text of the
     license(s) in its own file, then that file, containing the text of the
     license(s) for the package is included in %license.
[x]: Package requires other packages for directories it uses.
[x]: Package must own all directories that it creates.
[x]: Package does not own files or directories owned by other packages.
[x]: Package uses either %{buildroot} or $RPM_BUILD_ROOT
[x]: Package does not run rm -rf %{buildroot} (or $RPM_BUILD_ROOT) at the
     beginning of %install.
[x]: Macros in Summary, %description expandable at SRPM build time.
[x]: Dist tag is present.
[x]: Package does not contain duplicates in %files.
[x]: Permissions on files are set properly.
[x]: Package must not depend on deprecated() packages.
[x]: Package use %makeinstall only when make install DESTDIR=... doesn't
     work.
[x]: Package is named using only allowed ASCII characters.
[x]: Package does not use a name that already exists.
[x]: Package is not relocatable.
[x]: Sources used to build the package match the upstream source, as
     provided in the spec URL.
[x]: Spec file name must match the spec package %{name}, in the format
     %{name}.spec.
[x]: File names are valid UTF-8.
[x]: Packages must not store files under /srv, /opt or /usr/local

Python:
[x]: Python eggs must not download any dependencies during the build
     process.
[x]: A package which is used by another package via an egg interface should
     provide egg info.
[x]: Package meets the Packaging Guidelines::Python
[x]: Package contains BR: python2-devel or python3-devel
[x]: Packages MUST NOT have dependencies (either build-time or runtime) on
     packages named with the unversioned python- prefix unless no properly
     versioned package exists. Dependencies on Python packages instead MUST
     use names beginning with python2- or python3- as appropriate.
[x]: Python packages must not contain %{pythonX_site(lib|arch)}/* in %files
[x]: Binary eggs must be removed in %prep

===== SHOULD items =====

Generic:
[-]: If the source package does not include license text(s) as a separate
     file from upstream, the packager SHOULD query upstream to include it.
[x]: Final provides and requires are sane (see attachments).
[-]: Fully versioned dependency in subpackages if applicable.
     Note: No Requires: %{name}%{?_isa} = %{version}-%{release} in
     python3-ukkonen
[x]: Package functions as described.

     (based on %check passing)

[x]: Latest version is packaged.
[x]: Package does not include license text files separate from upstream.
[-]: Sources are verified with gpgverify first in %prep if upstream
     publishes signatures.
     Note: gpgverify is not used.
[-]: Description and summary sections in the package spec file contains
     translations for supported Non-English languages, if available.
[x]: Package should compile and build into binary rpms on all supported
     architectures.
[x]: %check is present and all tests pass.
[x]: Packages should try to preserve timestamps of original installed
     files.
[x]: Reviewer should test that the package builds in mock.
[x]: Buildroot is not present
[x]: Package has no %clean section with rm -rf %{buildroot} (or
     $RPM_BUILD_ROOT)
[x]: No file requires outside of /etc, /bin, /sbin, /usr/bin, /usr/sbin.
[x]: Packager, Vendor, PreReq, Copyright tags should not be in spec file
[x]: Sources can be downloaded from URI in Source: tag
[x]: SourceX is a working URL.
[x]: Spec use %global instead of %define unless justified.

===== EXTRA items =====

Generic:
[x]: Rpmlint is run on all installed packages.
     Note: There are rpmlint messages (see attachment).
[x]: Large data in /usr/share should live in a noarch subpackage if package
     is arched.
[x]: Spec file according to URL is the same as in SRPM.


Rpmlint
-------
Cannot parse rpmlint output:


Rpmlint (installed packages)
----------------------------
Cannot parse rpmlint output:


Unversioned so-files
--------------------
python3-ukkonen: /usr/lib64/python3.10/site-packages/_ukkonen.abi3.so

Source checksums
----------------
https://www.github.com/asottile/ukkonen/archive/v1.0.1/ukkonen-1.0.1.tar.gz :
  CHECKSUM(SHA256) this package     : 5f3fd0e9c1b2a7ea669382ec3928370f11882cec991c4d3757955b56d18895f6
  CHECKSUM(SHA256) upstream package : 5f3fd0e9c1b2a7ea669382ec3928370f11882cec991c4d3757955b56d18895f6


Requires
--------
python3-ukkonen (rpmlib, GLIBC filtered):
    libc.so.6()(64bit)
    libgcc_s.so.1()(64bit)
    libgcc_s.so.1(GCC_3.0)(64bit)
    libstdc++.so.6()(64bit)
    libstdc++.so.6(CXXABI_1.3)(64bit)
    libstdc++.so.6(CXXABI_1.3.9)(64bit)
    python(abi)
    python3.10dist(cffi)
    rtld(GNU_HASH)

python-ukkonen-debugsource (rpmlib, GLIBC filtered):



Provides
--------
python3-ukkonen:
    python-ukkonen
    python3-ukkonen
    python3-ukkonen(x86-64)
    python3.10-ukkonen
    python3.10dist(ukkonen)
    python3dist(ukkonen)

python-ukkonen-debugsource:
    python-ukkonen-debugsource
    python-ukkonen-debugsource(x86-64)



Generated by fedora-review 0.7.6 (b083f91) last change: 2020-11-10
Command line :/usr/bin/fedora-review -b 2025024
Buildroot used: fedora-rawhide-x86_64
Active plugins: C/C++, Generic, Python, Shell-api
Disabled plugins: SugarActivity, Java, fonts, Ocaml, Haskell, Perl, PHP, R
Disabled flags: EPEL6, EPEL7, DISTTAG, BATCH, EXARCH
============================ rpmlint session starts ============================
rpmlint: 2.1.0
configuration:
    /usr/lib/python3.10/site-packages/rpmlint/configdefaults.toml
    /etc/xdg/rpmlint/fedora.toml
    /etc/xdg/rpmlint/licenses.toml
    /etc/xdg/rpmlint/scoring.toml
    /etc/xdg/rpmlint/users-groups.toml
    /etc/xdg/rpmlint/warn-on-functions.toml
checks: 31, packages: 4

python3-ukkonen-debuginfo.x86_64: W: unstripped-binary-or-object /usr/lib/debug/usr/lib64/python3.10/site-packages/_ukkonen.abi3.so-1.0.1-2.fc36.x86_64.debug
python3-ukkonen-debuginfo.x86_64: E: shared-library-without-dependency-information /usr/lib/debug/usr/lib64/python3.10/site-packages/_ukkonen.abi3.so-1.0.1-2.fc36.x86_64.debug
python3-ukkonen-debuginfo.x86_64: W: no-documentation
python-ukkonen-debugsource.x86_64: W: no-documentation
python3-ukkonen-debuginfo.x86_64: W: dangling-relative-symlink /usr/lib/debug/.build-id/30/a55a11ac3809ab967dde76eaeb4e548d92d79b ../../../.build-id/30/a55a11ac3809ab967dde76eaeb4e548d92d79b
 4 packages and 0 specfiles checked; 1 errors, 4 warnings, 1 badness; has taken 0.5 s

Comment 4 Gwyn Ciesla 2021-12-06 21:58:37 UTC
No worries, thank you so much!

Comment 5 Gwyn Ciesla 2021-12-06 22:05:40 UTC
(fedscm-admin):  The Pagure repository was created at https://src.fedoraproject.org/rpms/python-ukkonen


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