Bug 2241457 - Review Request: libdicom - C library and tools for reading DICOM data sets
Summary: Review Request: libdicom - C library and tools for reading DICOM data sets
Keywords:
Status: CLOSED ERRATA
Alias: None
Product: Fedora
Classification: Fedora
Component: Package Review
Version: rawhide
Hardware: All
OS: Linux
medium
medium
Target Milestone: ---
Assignee: Benson Muite
QA Contact: Fedora Extras Quality Assurance
URL:
Whiteboard:
Depends On:
Blocks:
TreeView+ depends on / blocked
 
Reported: 2023-09-30 05:22 UTC by Benjamin Gilbert
Modified: 2023-10-09 07:40 UTC (History)
3 users (show)

Fixed In Version:
Clone Of:
Environment:
Last Closed: 2023-10-09 07:40:12 UTC
Type: ---
Embargoed:
benson_muite: fedora-review+


Attachments (Terms of Use)

Description Benjamin Gilbert 2023-09-30 05:22:10 UTC
Spec URL: https://fedorapeople.org/~bgilbert/libdicom/libdicom.spec
SRPM URL: https://fedorapeople.org/~bgilbert/libdicom/libdicom-1.0.0-1.fc38.src.rpm

Description:
libdicom is a C library and a set of tools for reading files that
follow the DICOM medical imaging standard.  It allows random access to
individual frame items of Pixel Data elements, permitting efficient
processing of large DICOM images.

Fedora Account System Username: bgilbert

Comment 1 Benjamin Gilbert 2023-10-03 12:19:41 UTC
Updated for 1.0.0 final release.

Comment 2 Benson Muite 2023-10-04 16:23:09 UTC
Package Review
==============

Legend:
[x] = Pass, [!] = Fail, [-] = Not applicable, [?] = Not evaluated
[ ] = Manual review needed



===== MUST items =====

C/C++:
[x]: Package does not contain kernel modules.
[x]: If your application is a C or C++ application you must list a
     BuildRequires against gcc, gcc-c++ or clang.
[x]: Header files in -devel subpackage, if present.
[x]: ldconfig not called in %post and %postun for Fedora 28 and later.
[x]: Package does not contain any libtool archives (.la)
[x]: Package contains no static executables.
[x]: Rpath absent or only used for internal libs.
[x]: Development (unversioned) .so files in -devel subpackage, if present.

Generic:
[x]: Package is licensed with an open-source compatible license and meets
     other legal requirements as defined in the legal section of Packaging
     Guidelines.
[x]: License field in the package spec file matches the actual license.
     Note: Checking patched sources after %prep for licenses. Licenses
     found: "Unknown or generated", "MIT License", "*No copyright* MIT
     License". 90 files have unknown license. Detailed output of
     licensecheck in
     /home/FedoraPackaging/reviews/libdicom/2241457-libdicom/licensecheck.txt
[!]: License file installed when any subpackage combination is installed.
[x]: %build honors applicable compiler flags or justifies otherwise.
[ ]: Package contains no bundled libraries without FPC exception.
[x]: Changelog in prescribed format.
[x]: Sources contain only permissible code or content.
[-]: Package contains desktop file if it is a GUI application.
[x]: Development files must be in a -devel package
[x]: Package uses nothing in %doc for runtime.
[x]: Package consistently uses macros (instead of hard-coded directory
     names).
[x]: Package is named according to the Package Naming Guidelines.
[ ]: Package does not generate any conflict.
[x]: Package obeys FHS, except libexecdir and /usr/target.
[x]: If the package is a rename of another package, proper Obsoletes and
     Provides are present.
[-]: Requires correct, justified where necessary.
[x]: Spec file is legible and written in American English.
[-]: Package contains systemd file(s) if in need.
[x]: Useful -debuginfo package or justification otherwise.
[x]: Package is not known to require an ExcludeArch tag.
[ ]: Package complies to the Packaging Guidelines
[x]: Package successfully compiles and builds into binary rpms on at least
     one supported primary architecture.
[x]: Package installs properly.
[x]: Rpmlint is run on all rpms the build produces.
     Note: No rpmlint messages.
[x]: If (and only if) the source package includes the text of the
     license(s) in its own file, then that file, containing the text of the
     license(s) for the package is included in %license.
[x]: The License field must be a valid SPDX expression.
[x]: Package requires other packages for directories it uses.
[x]: Package must own all directories that it creates.
[x]: Package does not own files or directories owned by other packages.
[x]: Package uses either %{buildroot} or $RPM_BUILD_ROOT
[x]: Package does not run rm -rf %{buildroot} (or $RPM_BUILD_ROOT) at the
     beginning of %install.
[x]: Macros in Summary, %description expandable at SRPM build time.
[x]: Dist tag is present.
[x]: Package does not contain duplicates in %files.
[x]: Permissions on files are set properly.
[x]: Package must not depend on deprecated() packages.
[x]: Package use %makeinstall only when make install DESTDIR=... doesn't
     work.
[x]: Package is named using only allowed ASCII characters.
[x]: Package does not use a name that already exists.
[x]: Package is not relocatable.
[x]: Sources used to build the package match the upstream source, as
     provided in the spec URL.
[x]: Spec file name must match the spec package %{name}, in the format
     %{name}.spec.
[x]: File names are valid UTF-8.
[x]: Large documentation must go in a -doc subpackage. Large could be size
     (~1MB) or number of files.
     Note: Documentation size is 0 bytes in 0 files.
[x]: Packages must not store files under /srv, /opt or /usr/local

===== SHOULD items =====

Generic:
[ ]: Avoid bundling fonts in non-fonts packages.
     Note: Package contains font files
[-]: If the source package does not include license text(s) as a separate
     file from upstream, the packager SHOULD query upstream to include it.
[x]: Final provides and requires are sane (see attachments).
[ ]: Fully versioned dependency in subpackages if applicable.
     Note: No Requires: %{name}%{?_isa} = %{version}-%{release} in
     libdicom-tools
[ ]: Package functions as described.
[!]: Latest version is packaged.
[x]: Package does not include license text files separate from upstream.
[-]: Sources are verified with gpgverify first in %prep if upstream
     publishes signatures.
     Note: gpgverify is not used.
[x]: Package should compile and build into binary rpms on all supported
     architectures.
[x]: %check is present and all tests pass.
[x]: Packages should try to preserve timestamps of original installed
     files.
[x]: Reviewer should test that the package builds in mock.
[x]: Buildroot is not present
[x]: Package has no %clean section with rm -rf %{buildroot} (or
     $RPM_BUILD_ROOT)
[x]: No file requires outside of /etc, /bin, /sbin, /usr/bin, /usr/sbin.
[x]: Packager, Vendor, PreReq, Copyright tags should not be in spec file
[x]: The placement of pkgconfig(.pc) files are correct.
[x]: Sources can be downloaded from URI in Source: tag
[x]: SourceX is a working URL.
[x]: Spec use %global instead of %define unless justified.

===== EXTRA items =====

Generic:
[x]: Rpmlint is run on debuginfo package(s).
     Note: No rpmlint messages.
[x]: Rpmlint is run on all installed packages.
     Note: No rpmlint messages.
[x]: Large data in /usr/share should live in a noarch subpackage if package
     is arched.
[x]: Spec file according to URL is the same as in SRPM.


Rpmlint
-------
Checking: libdicom-1.0.0-1.fc38.x86_64.rpm
          libdicom-devel-1.0.0-1.fc38.x86_64.rpm
          libdicom-doc-1.0.0-1.fc38.noarch.rpm
          libdicom-tools-1.0.0-1.fc38.x86_64.rpm
          libdicom-debuginfo-1.0.0-1.fc38.x86_64.rpm
          libdicom-debugsource-1.0.0-1.fc38.x86_64.rpm
          libdicom-1.0.0-1.fc38.src.rpm
============================ rpmlint session starts ============================
rpmlint: 2.4.0
configuration:
    /usr/lib/python3.11/site-packages/rpmlint/configdefaults.toml
    /etc/xdg/rpmlint/fedora-legacy-licenses.toml
    /etc/xdg/rpmlint/fedora-spdx-licenses.toml
    /etc/xdg/rpmlint/fedora.toml
    /etc/xdg/rpmlint/scoring.toml
    /etc/xdg/rpmlint/users-groups.toml
    /etc/xdg/rpmlint/warn-on-functions.toml
rpmlintrc: [PosixPath('/tmp/tmpxiv3qlca')]
checks: 31, packages: 7

 7 packages and 0 specfiles checked; 0 errors, 0 warnings, 0 badness; has taken 4.6 s 




Rpmlint (debuginfo)
-------------------
Checking: libdicom-debuginfo-1.0.0-1.fc38.x86_64.rpm
          libdicom-tools-debuginfo-1.0.0-1.fc38.x86_64.rpm
============================ rpmlint session starts ============================
rpmlint: 2.4.0
configuration:
    /usr/lib/python3.11/site-packages/rpmlint/configdefaults.toml
    /etc/xdg/rpmlint/fedora-legacy-licenses.toml
    /etc/xdg/rpmlint/fedora-spdx-licenses.toml
    /etc/xdg/rpmlint/fedora.toml
    /etc/xdg/rpmlint/scoring.toml
    /etc/xdg/rpmlint/users-groups.toml
    /etc/xdg/rpmlint/warn-on-functions.toml
rpmlintrc: [PosixPath('/tmp/tmp8d9ovkam')]
checks: 31, packages: 2

 2 packages and 0 specfiles checked; 0 errors, 0 warnings, 0 badness; has taken 2.5 s 





Rpmlint (installed packages)
----------------------------
============================ rpmlint session starts ============================
rpmlint: 2.4.0
configuration:
    /usr/lib/python3.11/site-packages/rpmlint/configdefaults.toml
    /etc/xdg/rpmlint/fedora-legacy-licenses.toml
    /etc/xdg/rpmlint/fedora-spdx-licenses.toml
    /etc/xdg/rpmlint/fedora.toml
    /etc/xdg/rpmlint/scoring.toml
    /etc/xdg/rpmlint/users-groups.toml
    /etc/xdg/rpmlint/warn-on-functions.toml
checks: 31, packages: 7

 7 packages and 0 specfiles checked; 0 errors, 0 warnings, 0 badness; has taken 5.2 s 



Source checksums
----------------
https://github.com/ImagingDataCommons/libdicom/releases/download/v1.0.0/libdicom-1.0.0.tar.xz :
  CHECKSUM(SHA256) this package     : 761c048dfa4cf7d9d577aea97a3eda0e3ff96a77c7e758babc9c6d24b097ab4c
  CHECKSUM(SHA256) upstream package : 761c048dfa4cf7d9d577aea97a3eda0e3ff96a77c7e758babc9c6d24b097ab4c


Requires
--------
libdicom (rpmlib, GLIBC filtered):
    libc.so.6()(64bit)
    rtld(GNU_HASH)

libdicom-devel (rpmlib, GLIBC filtered):
    /usr/bin/pkg-config
    libdicom(x86-64)
    libdicom.so.1()(64bit)

libdicom-doc (rpmlib, GLIBC filtered):

libdicom-tools (rpmlib, GLIBC filtered):
    libc.so.6()(64bit)
    libdicom.so.1()(64bit)
    rtld(GNU_HASH)

libdicom-debuginfo (rpmlib, GLIBC filtered):

libdicom-debugsource (rpmlib, GLIBC filtered):



Provides
--------
libdicom:
    libdicom
    libdicom(x86-64)
    libdicom.so.1()(64bit)

libdicom-devel:
    libdicom-devel
    libdicom-devel(x86-64)
    pkgconfig(libdicom)

libdicom-doc:
    libdicom-doc

libdicom-tools:
    libdicom-tools
    libdicom-tools(x86-64)

libdicom-debuginfo:
    debuginfo(build-id)
    libdicom-debuginfo
    libdicom-debuginfo(x86-64)
    libdicom.so.1.0.0-1.0.0-1.fc38.x86_64.debug()(64bit)

libdicom-debugsource:
    libdicom-debugsource
    libdicom-debugsource(x86-64)



Generated by fedora-review 0.10.0 (e79b66b) last change: 2023-07-24
Command line :/usr/bin/fedora-review -b 2241457 -m fedora-38-x86_64
Buildroot used: fedora-38-x86_64
Active plugins: C/C++, Generic, Shell-api
Disabled plugins: PHP, Haskell, Ocaml, Python, Ruby, Java, R, SugarActivity, fonts, Perl
Disabled flags: EXARCH, EPEL6, EPEL7, DISTTAG, BATCH

Comments:
a) 1.0.1 was released yesterday
b) tools package does not have a license file and does not require a package with the license file.
c) Consider making documentation available as man pages to avoid bundled fonts and javascript. If html
documentation is packaged, may want to symlink to fonts available in Fedora and require those packages.
Also if html documentation is packaged, indicated bundled(js-jquery) in the spec file.
As the documentation can be built in Fedora, it would be preferable to rebuild it rather than use
what is bundled with the release.
d) Builds on all architectures:
https://koji.fedoraproject.org/koji/taskinfo?taskID=107057463

Comment 3 Benjamin Gilbert 2023-10-04 17:59:54 UTC
Thanks for the review!

a) Updated.
b) The tools package has a dynamically-generated dependency on the library package, which does have a license file.
c) There are man pages for the tools, but upstream doesn't maintain library docs as man pages, and man pages don't seem like a great fit for a large C API.  Building the HTML docs requires Hawkmoth, which is not packaged in Fedora.  I've added bundled(js-jquery) and symlinked the font files that are packaged in Fedora.

Comment 4 Benson Muite 2023-10-09 05:01:00 UTC
Have not forgotten. Working on Hawkmoth:
https://bugzilla.redhat.com/show_bug.cgi?id=2242806
though there are a few problems need to resolve upstream.

Comment 5 Benjamin Gilbert 2023-10-09 05:29:19 UTC
I've subscribed to the Hawkmoth review request, and am willing to update the libdicom spec file to rebuild docs once Hawkmoth is available.  For now, how would you feel about getting libdicom in as-is?  It's needed for OpenSlide 4.0, which will be released shortly.

Comment 6 Benson Muite 2023-10-09 06:13:02 UTC
Is it possible to skip doc package, or just put the RST files? Then add html docs once Hawkmoth is available and they can be
generated within Fedora?

Comment 7 Benjamin Gilbert 2023-10-09 06:47:48 UTC
Sure, I've switched to the RST files for now.

Comment 8 Benson Muite 2023-10-09 07:11:27 UTC
Thanks approved. Please also update to latest release.

Comment 9 Fedora Admin user for bugzilla script actions 2023-10-09 07:17:18 UTC
The Pagure repository was created at https://src.fedoraproject.org/rpms/libdicom

Comment 10 Benjamin Gilbert 2023-10-09 07:34:01 UTC
Thanks for reviewing!

Comment 11 Fedora Update System 2023-10-09 07:39:00 UTC
FEDORA-2023-10005ee853 has been submitted as an update to Fedora 40. https://bodhi.fedoraproject.org/updates/FEDORA-2023-10005ee853

Comment 12 Fedora Update System 2023-10-09 07:40:12 UTC
FEDORA-2023-10005ee853 has been pushed to the Fedora 40 stable repository.
If problem still persists, please make note of it in this bug report.


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