Bug 2334202 - Review Request: python-torchsde - Differentiable SDE solvers with GPU support and efficient sensitivity analysis
Summary: Review Request: python-torchsde - Differentiable SDE solvers with GPU support...
Keywords:
Status: CLOSED CURRENTRELEASE
Alias: None
Product: Fedora
Classification: Fedora
Component: Package Review
Version: rawhide
Hardware: Unspecified
OS: Linux
unspecified
medium
Target Milestone: ---
Assignee: Benson Muite
QA Contact: Fedora Extras Quality Assurance
URL: https://github.com/google-research/to...
Whiteboard:
Depends On:
Blocks: 2333656
TreeView+ depends on / blocked
 
Reported: 2024-12-26 13:23 UTC by Tom.Rix
Modified: 2025-03-16 14:37 UTC (History)
2 users (show)

Fixed In Version:
Clone Of:
Environment:
Last Closed: 2025-03-16 14:37:11 UTC
Type: ---
Embargoed:
benson_muite: fedora-review+


Attachments (Terms of Use)
Possible updates to spec file (1.37 KB, text/plain)
2024-12-29 17:24 UTC, Benson Muite
no flags Details
The .spec file difference from Copr build 8448916 to 8453922 (1.74 KB, patch)
2024-12-29 17:45 UTC, Fedora Review Service
no flags Details | Diff
The .spec file difference from Copr build 8453922 to 8455818 (1.87 KB, patch)
2024-12-30 19:52 UTC, Fedora Review Service
no flags Details | Diff

Description Tom.Rix 2024-12-26 13:23:47 UTC
Spec URL: https://trix.fedorapeople.org/python-torchsde.spec
SRPM URL: https://trix.fedorapeople.org/python-torchsde-0.2.6-1.fc42.src.rpm

PyTorch Implementation of Differentiable SDE Solvers Python package
This library provides stochastic differential equation (SDE) solvers
with GPU support and efficient backpropagation.

This is a build requires for the ComfyUI package.


Reproducible: Always

Comment 1 Fedora Review Service 2024-12-26 13:29:00 UTC
Copr build:
https://copr.fedorainfracloud.org/coprs/build/8448916
(succeeded)

Review template:
https://download.copr.fedorainfracloud.org/results/@fedora-review/fedora-review-2334202-python-torchsde/fedora-rawhide-x86_64/08448916-python-torchsde/fedora-review/review.txt

Please take a look if any issues were found.


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Comment 2 Benson Muite 2024-12-29 17:22:49 UTC
Comments:

a) Consider running tests:
https://github.com/google-research/torchsde/tree/master/tests

b) Consider packaging documentation:
%doc DOCUMENTATION.md

c) Consider packaging examples as documentation
%doc examples

d) Updated build with above changes

https://koji.fedoraproject.org/koji/taskinfo?taskID=127373007

srpm: https://kojipkgs.fedoraproject.org//work/tasks/3007/127373007/python-torchsde-0.2.6-1.fc42.src.rpm

Comment 3 Benson Muite 2024-12-29 17:24:43 UTC
Created attachment 2064145 [details]
Possible updates to spec file

Comment 4 Benson Muite 2024-12-29 17:30:11 UTC
[fedora-review-service-build]

Comment 5 Fedora Review Service 2024-12-29 17:45:30 UTC
Created attachment 2064158 [details]
The .spec file difference from Copr build 8448916 to 8453922

Comment 6 Fedora Review Service 2024-12-29 17:45:32 UTC
Copr build:
https://copr.fedorainfracloud.org/coprs/build/8453922
(succeeded)

Review template:
https://download.copr.fedorainfracloud.org/results/@fedora-review/fedora-review-2334202-python-torchsde/fedora-rawhide-x86_64/08453922-python-torchsde/fedora-review/review.txt

Found issues:

- python3-pytest7 is deprecated, you must not depend on it.
  Read more: https://docs.fedoraproject.org/en-US/packaging-guidelines/deprecating-packages/

Please know that there can be false-positives.

---
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https://github.com/FrostyX/fedora-review-service

If you want to trigger a new Copr build, add a comment containing new
Spec and SRPM URLs or [fedora-review-service-build] string.

Comment 7 Benson Muite 2024-12-29 18:35:22 UTC
Examples could be a separate sub package if included.

Comment 8 Tom.Rix 2024-12-30 19:42:03 UTC
Spec URL: https://trix.fedorapeople.org/python-torchsde.spec
SRPM URL: https://trix.fedorapeople.org/python-torchsde-0.2.6-1.fc42.src.rpm

For the changes.
I kept the examples in the main project.

Tom

Comment 9 Fedora Review Service 2024-12-30 19:52:01 UTC
Created attachment 2064305 [details]
The .spec file difference from Copr build 8453922 to 8455818

Comment 10 Fedora Review Service 2024-12-30 19:52:03 UTC
Copr build:
https://copr.fedorainfracloud.org/coprs/build/8455818
(succeeded)

Review template:
https://download.copr.fedorainfracloud.org/results/@fedora-review/fedora-review-2334202-python-torchsde/fedora-rawhide-x86_64/08455818-python-torchsde/fedora-review/review.txt

Found issues:

- python3-pytest7 is deprecated, you must not depend on it.
  Read more: https://docs.fedoraproject.org/en-US/packaging-guidelines/deprecating-packages/

Please know that there can be false-positives.

---
This comment was created by the fedora-review-service
https://github.com/FrostyX/fedora-review-service

If you want to trigger a new Copr build, add a comment containing new
Spec and SRPM URLs or [fedora-review-service-build] string.

Comment 11 Benson Muite 2024-12-31 14:24:01 UTC
Package Review
==============

Legend:
[x] = Pass, [!] = Fail, [-] = Not applicable, [?] = Not evaluated
[ ] = Manual review needed


Issues:
=======
- Package must not depend on deprecated() packages.
  Note: python3-pytest7 is deprecated, you must not depend on it.
  See: https://docs.fedoraproject.org/en-US/packaging-
  guidelines/deprecating-packages/


===== MUST items =====

Generic:
[x]: Package is licensed with an open-source compatible license and meets
     other legal requirements as defined in the legal section of Packaging
     Guidelines.
[x]: License field in the package spec file matches the actual license.
     Note: Checking patched sources after %prep for licenses. Licenses
     found: "Unknown or generated", "*No copyright* Apache License 2.0",
     "Apache License 2.0". 8 files have unknown license. Detailed output of
     licensecheck in
     /FedoraPackaging/reviews/torchsde/2334202-python-torchsde/licensecheck.txt
[x]: Package must own all directories that it creates.
     Note: Directories without known owners: /usr/lib/python3.13,
     /usr/lib/python3.13/site-packages
[x]: Package contains no bundled libraries without FPC exception.
[x]: Changelog in prescribed format.
[x]: Sources contain only permissible code or content.
[-]: Package contains desktop file if it is a GUI application.
[-]: Development files must be in a -devel package
[x]: Package uses nothing in %doc for runtime.
[x]: Package consistently uses macros (instead of hard-coded directory
     names).
[x]: Package is named according to the Package Naming Guidelines.
[x]: Package does not generate any conflict.
[x]: Package obeys FHS, except libexecdir and /usr/target.
[-]: If the package is a rename of another package, proper Obsoletes and
     Provides are present.
[x]: Requires correct, justified where necessary.
[x]: Spec file is legible and written in American English.
[-]: Package contains systemd file(s) if in need.
[ ]: Package is not known to require an ExcludeArch tag.
[-]: Large documentation must go in a -doc subpackage. Large could be size
     (~1MB) or number of files.
     Note: Documentation size is 505249 bytes in 8 files.
[x]: Package complies to the Packaging Guidelines
[x]: Package successfully compiles and builds into binary rpms on at least
     one supported primary architecture.
[x]: Package installs properly.
[x]: Rpmlint is run on all rpms the build produces.
     Note: There are rpmlint messages (see attachment).
[x]: If (and only if) the source package includes the text of the
     license(s) in its own file, then that file, containing the text of the
     license(s) for the package is included in %license.
[x]: The License field must be a valid SPDX expression.
[x]: Package requires other packages for directories it uses.
[x]: Package does not own files or directories owned by other packages.
[x]: Package uses either %{buildroot} or $RPM_BUILD_ROOT
[x]: Package does not run rm -rf %{buildroot} (or $RPM_BUILD_ROOT) at the
     beginning of %install.
[x]: Macros in Summary, %description expandable at SRPM build time.
[x]: Dist tag is present.
[x]: Package does not contain duplicates in %files.
[x]: Permissions on files are set properly.
[x]: Package use %makeinstall only when make install DESTDIR=... doesn't
     work.
[x]: Package is named using only allowed ASCII characters.
[x]: Package does not use a name that already exists.
[x]: Package is not relocatable.
[x]: Sources used to build the package match the upstream source, as
     provided in the spec URL.
[x]: Spec file name must match the spec package %{name}, in the format
     %{name}.spec.
[x]: File names are valid UTF-8.
[x]: Packages must not store files under /srv, /opt or /usr/local

Python:
[-]: Python eggs must not download any dependencies during the build
     process.
[-]: A package which is used by another package via an egg interface should
     provide egg info.
[x]: Package meets the Packaging Guidelines::Python
[x]: Package contains BR: python2-devel or python3-devel
[x]: Packages MUST NOT have dependencies (either build-time or runtime) on
     packages named with the unversioned python- prefix unless no properly
     versioned package exists. Dependencies on Python packages instead MUST
     use names beginning with python2- or python3- as appropriate.
[x]: Python packages must not contain %{pythonX_site(lib|arch)}/* in %files
[x]: Binary eggs must be removed in %prep

===== SHOULD items =====

Generic:
[-]: If the source package does not include license text(s) as a separate
     file from upstream, the packager SHOULD query upstream to include it.
[x]: Final provides and requires are sane (see attachments).
[ ]: Package functions as described.
[x]: Latest version is packaged.
[x]: Package does not include license text files separate from upstream.
[-]: Sources are verified with gpgverify first in %prep if upstream
     publishes signatures.
     Note: gpgverify is not used.
[x]: %check is present and all tests pass.
[x]: Packages should try to preserve timestamps of original installed
     files.
[x]: Reviewer should test that the package builds in mock.
[x]: Buildroot is not present
[x]: Package has no %clean section with rm -rf %{buildroot} (or
     $RPM_BUILD_ROOT)
[x]: No file requires outside of /etc, /bin, /sbin, /usr/bin, /usr/sbin.
[x]: Packager, Vendor, PreReq, Copyright tags should not be in spec file
[x]: Sources can be downloaded from URI in Source: tag
[x]: SourceX is a working URL.
[x]: Package should compile and build into binary rpms on all supported
     architectures.
[x]: Spec use %global instead of %define unless justified.

===== EXTRA items =====

Generic:
[x]: Rpmlint is run on all installed packages.
     Note: There are rpmlint messages (see attachment).
[x]: Spec file according to URL is the same as in SRPM.


Rpmlint
-------
Checking: python3-torchsde-0.2.6-1.fc42.noarch.rpm
          python-torchsde-0.2.6-1.fc42.src.rpm
============================ rpmlint session starts ============================
rpmlint: 2.5.0
configuration:
    /usr/lib/python3.13/site-packages/rpmlint/configdefaults.toml
    /etc/xdg/rpmlint/fedora-spdx-licenses.toml
    /etc/xdg/rpmlint/fedora.toml
    /etc/xdg/rpmlint/scoring.toml
    /etc/xdg/rpmlint/users-groups.toml
    /etc/xdg/rpmlint/warn-on-functions.toml
rpmlintrc: [PosixPath('/tmp/tmp_cw8l7oq')]
checks: 32, packages: 2

python-torchsde.src: E: spelling-error ('backpropagation', '%description -l en_US backpropagation -> back propagation, back-propagation, propagation')
python3-torchsde.noarch: E: spelling-error ('backpropagation', '%description -l en_US backpropagation -> back propagation, back-propagation, propagation')
python3-torchsde.noarch: W: package-with-huge-docs 50%
python3-torchsde.noarch: W: files-duplicate /usr/lib/python3.13/site-packages/torchsde/_core/methods/tableaus/__init__.py /usr/lib/python3.13/site-packages/torchsde/_core/__init__.py
 2 packages and 0 specfiles checked; 2 errors, 2 warnings, 11 filtered, 2 badness; has taken 1.5 s 




Rpmlint (installed packages)
----------------------------
============================ rpmlint session starts ============================
rpmlint: 2.5.0
configuration:
    /usr/lib/python3.13/site-packages/rpmlint/configdefaults.toml
    /etc/xdg/rpmlint/fedora-spdx-licenses.toml
    /etc/xdg/rpmlint/fedora.toml
    /etc/xdg/rpmlint/scoring.toml
    /etc/xdg/rpmlint/users-groups.toml
    /etc/xdg/rpmlint/warn-on-functions.toml
checks: 32, packages: 1

python3-torchsde.noarch: E: spelling-error ('backpropagation', '%description -l en_US backpropagation -> back propagation, back-propagation, propagation')
python3-torchsde.noarch: W: package-with-huge-docs 50%
python3-torchsde.noarch: W: files-duplicate /usr/lib/python3.13/site-packages/torchsde/_core/methods/tableaus/__init__.py /usr/lib/python3.13/site-packages/torchsde/_core/__init__.py
 1 packages and 0 specfiles checked; 1 errors, 2 warnings, 7 filtered, 1 badness; has taken 0.7 s 



Source checksums
----------------
https://github.com/google-research/torchsde/archive/v0.2.6/torchsde-0.2.6.tar.gz :
  CHECKSUM(SHA256) this package     : 7680ec86eb2a53918a66cead8ca0f6b50dd2fe36acfc909b546d336d269d2177
  CHECKSUM(SHA256) upstream package : 7680ec86eb2a53918a66cead8ca0f6b50dd2fe36acfc909b546d336d269d2177


Requires
--------
python3-torchsde (rpmlib, GLIBC filtered):
    python(abi)
    python3.13dist(numpy)
    python3.13dist(scipy)
    python3.13dist(torch)
    python3.13dist(trampoline)



Provides
--------
python3-torchsde:
    python-torchsde
    python3-torchsde
    python3.13-torchsde
    python3.13dist(torchsde)
    python3dist(torchsde)



Generated by fedora-review 0.10.0 (e79b66b) last change: 2023-07-24
Command line :/usr/bin/fedora-review -b 2334202
Buildroot used: fedora-rawhide-x86_64
Active plugins: Generic, Python, Shell-api
Disabled plugins: R, Perl, PHP, Java, SugarActivity, Ocaml, C/C++, fonts, Haskell
Disabled flags: EXARCH, EPEL6, EPEL7, DISTTAG, BATCH

Comments:
a) Upstream accepted patch to enable tests to run:
https://github.com/google-research/torchsde/pull/158
b) Approved.

Comment 12 Fedora Admin user for bugzilla script actions 2025-01-01 12:58:31 UTC
The Pagure repository was created at https://src.fedoraproject.org/rpms/python-torchsde


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