Bug 2418591 - Review Request: perl-Chemistry-File-PDB - Protein Data Bank file format reader/writer
Summary: Review Request: perl-Chemistry-File-PDB - Protein Data Bank file format reade...
Keywords:
Status: NEW
Alias: None
Product: Fedora
Classification: Fedora
Component: Package Review
Version: rawhide
Hardware: All
OS: Linux
medium
medium
Target Milestone: ---
Assignee: Nobody's working on this, feel free to take it
QA Contact: Fedora Extras Quality Assurance
URL: https://metacpan.org/dist/Chemistry-F...
Whiteboard: Trivial
Depends On: 2418386
Blocks: 2418619
TreeView+ depends on / blocked
 
Reported: 2025-12-03 12:45 UTC by Dominik 'Rathann' Mierzejewski
Modified: 2025-12-03 21:04 UTC (History)
1 user (show)

Fixed In Version:
Clone Of:
Environment:
Last Closed:
Type: ---
Embargoed:


Attachments (Terms of Use)

Description Dominik 'Rathann' Mierzejewski 2025-12-03 12:45:25 UTC
Spec URL: https://rathann.fedorapeople.org/review/perl-Chemistry-File-PDB/perl-Chemistry-File-PDB.spec
SRPM URL: https://rathann.fedorapeople.org/review/perl-Chemistry-File-PDB/perl-Chemistry-File-PDB-0.23-1.fc44.src.rpm
Description:
This module reads and writes PDB files. The PDB file format is commonly
used to describe proteins, particularly those stored in the Protein Data
Bank (http://www.rcsb.org/pdb/). The current version of this module only
reads the following record types, ignoring everything else:

ATOM
HETATM
ENDMDL
END

This module automatically registers the 'pdb' format with
Chemistry::Mol, so that PDB files may be identified and read by
Chemistry::Mol->read(). For autodetection purpuses, it assumes that
files ending in .pdb or having a line matching /^(ATOM |HETATM)/ are PDB
files.

The PDB reader and writer is designed for dealing with
Chemistry::MacroMol objects, but it can also create and use
Chemistry::Mol objects by throwing some information away.

Fedora Account System Username: rathann

Comment 1 Fedora Review Service 2025-12-03 21:04:54 UTC
Copr build:
https://copr.fedorainfracloud.org/coprs/build/9863296
(failed)

Build log:
https://download.copr.fedorainfracloud.org/results/@fedora-review/fedora-review-2418591-perl-chemistry-file-pdb/fedora-rawhide-x86_64/09863296-perl-Chemistry-File-PDB/builder-live.log.gz

Please make sure the package builds successfully at least for Fedora Rawhide.

- If the build failed for unrelated reasons (e.g. temporary network
  unavailability), please ignore it.
- If the build failed because of missing BuildRequires, please make sure they
  are listed in the "Depends On" field


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