Bug 2448756 (CVE-2026-31964) - CVE-2026-31964 htslib: HTSlib: Denial of Service via NULL pointer dereference in CRAM decoding
Summary: CVE-2026-31964 htslib: HTSlib: Denial of Service via NULL pointer dereference...
Keywords:
Status: NEW
Alias: CVE-2026-31964
Product: Security Response
Classification: Other
Component: vulnerability
Version: unspecified
Hardware: All
OS: Linux
medium
medium
Target Milestone: ---
Assignee: Product Security DevOps Team
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Depends On: 2448821 2448822 2448823 2448824 2448825 2448826
Blocks:
TreeView+ depends on / blocked
 
Reported: 2026-03-18 19:03 UTC by OSIDB Bzimport
Modified: 2026-03-18 20:33 UTC (History)
0 users

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Description OSIDB Bzimport 2026-03-18 19:03:29 UTC
HTSlib is a library for reading and writing bioinformatics file formats. CRAM is a compressed format which stores DNA sequence alignment data using a variety of encodings and compression methods.  While most alignment records store DNA sequence and quality values, the format also allows them to omit this data in certain cases to save space. Due to some quirks of the CRAM format, it is necessary to handle these records carefully as they will actually store data that needs to be consumed and then discarded. Unfortunately the `CONST`, `XPACK` and `XRLE` encodings did not properly implement the interface needed to do this. Trying to decode records with omitted sequence or quality data using these encodings would result in an attempt to write to a NULL pointer. Exploiting this bug causes a NULL pointer dereference. Typically this will cause the program to crash. Versions 1.23.1, 1.22.2 and 1.21.1 include fixes for this issue. There is no workaround for this issue.


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