Bug 537232 - PU: need OpenMPI wrapper script
Summary: PU: need OpenMPI wrapper script
Keywords:
Status: CLOSED ERRATA
Alias: None
Product: Red Hat Enterprise MRG
Classification: Red Hat
Component: condor
Version: 1.1
Hardware: All
OS: Linux
high
medium
Target Milestone: 1.3
: ---
Assignee: Pete MacKinnon
QA Contact: Martin Kudlej
URL:
Whiteboard:
Depends On: 549432
Blocks:
TreeView+ depends on / blocked
 
Reported: 2009-11-12 21:31 UTC by Jon Thomas
Modified: 2018-10-27 14:03 UTC (History)
5 users (show)

Fixed In Version:
Doc Type: Bug Fix
Doc Text:
This update introduces ompiscript, an OpenMPI wrapper script that works with Condor.
Clone Of:
Environment:
Last Closed: 2010-10-14 16:09:40 UTC
Target Upstream Version:
Embargoed:


Attachments (Terms of Use)
Wrapper script, test prog, makefile, config, submit file (20.00 KB, application/x-tar)
2009-11-17 23:21 UTC, Pete MacKinnon
no flags Details


Links
System ID Private Priority Status Summary Last Updated
Red Hat Product Errata RHSA-2010:0773 0 normal SHIPPED_LIVE Moderate: Red Hat Enterprise MRG Messaging and Grid Version 1.3 2010-10-14 15:56:44 UTC

Description Jon Thomas 2009-11-12 21:31:34 UTC
Description of problem:

We need an OpenMPI (mpirun) wrapper script that works w/ Condor.  Matt had alluded that such scripts exist a while back and that he could help get us that.

The RFE here would be to request that working wrapper scripts be included in a future condor RPM release.
Files:

Comment 2 Pete MacKinnon 2009-11-17 23:21:03 UTC
Created attachment 369980 [details]
Wrapper script, test prog, makefile, config, submit file

Test environment: FC11, Personal Condor (7.4.1-0.5)

Files attached:

condor_config.local - to set up personal condor as dedicated scheduler+resource (if needed)
mpi.sub - PU submit file
ompiscript - wrapper script that is very similar to packaged mich1, lam scripts
sshd.sh - modified from stock to make this work properly for my test (not sure how it ever worked)
summpi.c - simple MPI sum C++ code
Makefile - for above

Note the use of pmackinn comments to indicate where I had to tweak/optimize things in my test env. This hasn't been tested in our MRG pool but I guess I don't foresee Condor problems (maybe MPI though which is out of my element). The use of file transfer in the submission is crucial for the supporting scripts like sshd.sh. I have a theory about this which I will pursue.

Comment 3 Matthew Farrellee 2010-02-03 13:41:14 UTC
http://condor-wiki.cs.wisc.edu/index.cgi/tktview?tn=1174

MODI->ASSIGNED (might as well be POST) while scripts are going upstream

Comment 4 Matthew Farrellee 2010-03-04 03:30:45 UTC
Built in condor 7.4.3-0.4

Comment 5 Martin Kudlej 2010-03-17 15:30:37 UTC
Tested on RHEL 4/5 x i386/x86_64 with condor-7.4.3-0.5 and it works.

Comment 6 Matthew Farrellee 2010-04-12 20:25:03 UTC
This should be tested across at least 4 machines

Comment 7 Martin Kudlej 2010-04-26 13:49:20 UTC
Tested on 4 machines for each combination RHEL 4/5 x i386/x86_64 with condor-7.4.3-0.11 and it works.

Comment 11 Florian Nadge 2010-10-07 15:43:39 UTC
    Technical note added. If any revisions are required, please edit the "Technical Notes" field
    accordingly. All revisions will be proofread by the Engineering Content Services team.
    
    New Contents:
This new feature adds a an OpenMPI (mpirun) wrapper script that works with Condor.

Comment 12 Florian Nadge 2010-10-08 08:29:22 UTC
    Technical note updated. If any revisions are required, please edit the "Technical Notes" field
    accordingly. All revisions will be proofread by the Engineering Content Services team.
    
    Diffed Contents:
@@ -1 +1 @@
-This new feature adds a an OpenMPI (mpirun) wrapper script that works with Condor.+This new feature adds an OpenMPI wrapper script to Condor. It adds support for OpenMPI jobs.

Comment 13 Jaromir Hradilek 2010-10-13 15:54:19 UTC
    Technical note updated. If any revisions are required, please edit the "Technical Notes" field
    accordingly. All revisions will be proofread by the Engineering Content Services team.
    
    Diffed Contents:
@@ -1 +1 @@
-This new feature adds an OpenMPI wrapper script to Condor. It adds support for OpenMPI jobs.+This update introduces ompiscript, an OpenMPI wrapper script that works with Condor.

Comment 15 errata-xmlrpc 2010-10-14 16:09:40 UTC
An advisory has been issued which should help the problem
described in this bug report. This report is therefore being
closed with a resolution of ERRATA. For more information
on therefore solution and/or where to find the updated files,
please follow the link below. You may reopen this bug report
if the solution does not work for you.

http://rhn.redhat.com/errata/RHSA-2010-0773.html


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