Red Hat Bugzilla – Bug 604156
[abrt] crash in python-2.6.2-4.fc12: raise: Process /usr/bin/python2.6 was killed by signal 6 (SIGABRT)
Last modified: 2010-06-30 16:26:54 EDT
abrt 1.0.9 detected a crash. architecture: x86_64 Attached file: backtrace cmdline: /usr/bin/python2.6 -u /home/jgardes/Travail/Softwares/Sequences_finder/src/test.py component: python crash_function: raise executable: /usr/bin/python2.6 global_uuid: 5fe8dcc317873d734d6f0f7afe6acc2b290981f5 kernel: 2.6.32.12-115.fc12.x86_64 package: python-2.6.2-4.fc12 rating: 4 reason: Process /usr/bin/python2.6 was killed by signal 6 (SIGABRT) release: Fedora release 12 (Constantine)
Created attachment 424167 [details] File: backtrace
Thank you for filing this bug report. Looking at the backtrace I see that the problem is an invalid call to "free" in frame #4, as called by "proc_requete" which is a function wrapped in Python by ~/Logiciels_bioinfo/remoteacnuc/acnucmodule.so, which seems to be a module that you've built yourself: #3 0x0000003ac3274ac6 in malloc_printerr (action=3, str=0x3ac333c4a8 "free(): invalid pointer", ptr=<value optimized out>) at malloc.c:6267 buf = "00000000020d6220" cp = <value optimized out> #4 0x00007fb7e46d6191 in proc_requete () from /home/jgardes/Logiciels_bioinfo/remoteacnuc/acnucmodule.so #5 0x0000003acea43b33 in PyObject_Call (func=0x7fb7ead5eab8, arg=<value optimized out>, kw=<value optimized out>) at Objects/abstract.c:2492 result = 0x7fb7ead65081 call = 0x3acea805f0 <PyCFunction_Call> So as it stands, this looks like a bug in your version of "acnucmodule.so", rather than in python itself. Is a version of this module in Fedora? Is it open source? (See http://fedoraproject.org/wiki/SIGs/SciTech and the list at http://fedoraproject.org/wiki/SIGs/SciTech/BioinformaticsWishList for some notes on Fedora bioinformatics code) I'm going to close this bug, with the resolution "NOTABUG", as it's not a bug in our python rpms themselves (though obviously it _is_ a bug). Hope this is helpful; I'm sorry that I can't be of more help.