Red Hat Bugzilla – Bug 680645
Avogadro crash on adding molecule
Last modified: 2014-01-21 18:17:56 EST
Created attachment 481164 [details] crash details Description of problem: Did testing during X Test Week. Avogadro crash on adding molecule Version-Release number of selected component (if applicable): How reproducible: ALways Steps to Reproduce: 1. Install Fedora15 image 20110226.02 2. Run Avogadro 3. Add molecule Actual results: Crash Expected results: Additional info: Attached crash details. All debug symbols have been installed (2.4GB unpacked !!)
Crashes deep in mesa code. Nouveau driver in use. Reassigning. Unfortunately, you seem to still miss some debug symbols though: #0 0x00007fc397600068 in ?? () No symbol table info available. #1 0x0000000001064ab0 in ?? () No symbol table info available. #2 0x000000000106f060 in ?? () No symbol table info available. [snip] 0x00007fc3a4f59590 0x00007fc3a57119cc Yes (*) /usr/lib64/dri/libllvmcore-2.8.so [snip] (*): Shared library is missing debugging information. Are those symbols missing from mesa-debuginfo?
The first usable stack frames: #3 0x00007fc3a5dfc343 in fetch (output=<optimized out>, fetch_info=<optimized out>, fetch=<optimized out>) at draw/draw_pt_fetch_shade_pipeline.c:135 No locals. #4 fetch_pipeline_generic (middle=0x12755c0, fetch_info=<optimized out>, prim_info=0x7ffffa97c360) at draw/draw_pt_fetch_shade_pipeline.c:227 fpme = 0x12755c0 draw = 0x190 vshader = 0x12738e0 gshader = 0x0 gs_prim_info = {linear = 0 '\000', start = 0, elts = 0x0, count = 0, prim = 0, flags = 0, primitive_lengths = 0x0, primitive_count = 0} fetched_vert_info = {verts = 0x12755c0, vertex_size = 84, stride = 84, count = 400} vs_vert_info = {verts = 0x0, vertex_size = 0, stride = 0, count = 0} gs_vert_info = {verts = 0x0, vertex_size = 0, stride = 0, count = 0} vert_info = <optimized out> opt = 7
Created attachment 915196 [details] Comment (This comment was longer than 65,535 characters and has been moved to an attachment by Red Hat Bugzilla).
Don't know if it's important or not - I have NVIDIA GT9600 Mobile video on this computer. 01:00.0 VGA compatible controller [0300]: nVidia Corporation G96 [GeForce 9600M GT] [10de:0649] (rev a1) I also found that some missing debuginfo can be installe dby additional cvommands: #debuginfo-install nss-softokn-freebl #debuginfo-install ibus don't know why ABRT not included those packages for crash detection.
Created attachment 482420 [details] avogadro-crash - March 5, 2011 includes info with: nss-softokn-freebl ibus debuginfo packages installed.
This backtrace is still incomplete. Could you try to run debuginfo-install mesa and regenerate the backtrace, please? Thank you
# debuginfo-install mesa Loaded plugins: auto-update-debuginfo, langpacks, presto, refresh-packagekit Adding en_US to language list enabling updates-testing-debuginfo enabling fedora-debuginfo No debuginfo packages available to install
Reassigning the bug to yum-utils, why debuginfo-install is not able to download all missing debuginfos?
(In reply to comment #0) > All debug symbols have been installed (2.4GB unpacked !!) 2.4GB looks like a valid unpacked size. > warning: the debug information found in "/var/cache/abrt-di/usr/lib/debug//lib64/libfreebl3.so.debug" does not match "/lib64/libfreebl3.so" (CRC mismatch). When any "CRC mismatch" message is present the backtrace can be bogus. Please delete `/var/cache/abrt-di/*'.
debuginfo-install mesa Don't work because there is no package named mesa $ sudo yum list \*mesa\*Loaded plugins: langpacks, presto, refresh-packagekit Adding en_US to language list Installed Packages mesa-dri-drivers.x86_64 7.9-5.fc14 @updates mesa-libGL.x86_64 7.9-5.fc14 @updates mesa-libGLU.x86_64 7.9-5.fc14 @updates Available Packages lilypond-parmesan-fonts.x86_64 2.12.3-1.fc13 fedora mesa-demos.x86_64 7.9-5.fc14 updates mesa-dri-drivers.i686 7.9-5.fc14 updates mesa-dri-drivers-experimental.i686 7.9-5.fc14 updates mesa-dri-drivers-experimental.x86_64 7.9-5.fc14 updates mesa-libGL.i686 7.9-5.fc14 updates mesa-libGL-devel.i686 7.9-5.fc14 updates mesa-libGL-devel.x86_64 7.9-5.fc14 updates mesa-libGLU.i686 7.9-5.fc14 updates mesa-libGLU-devel.i686 7.9-5.fc14 updates mesa-libGLU-devel.x86_64 7.9-5.fc14 updates mesa-libGLw.i686 6.5.1-8.fc12 fedora mesa-libGLw.x86_64 6.5.1-8.fc12 fedora mesa-libGLw-devel.i686 6.5.1-8.fc12 fedora mesa-libGLw-devel.x86_64 6.5.1-8.fc12 fedora mesa-libOSMesa.i686 7.9-5.fc14 updates mesa-libOSMesa.x86_64 7.9-5.fc14 updates mesa-libOSMesa-devel.i686 7.9-5.fc14 updates mesa-libOSMesa-devel.x86_64 7.9-5.fc14 updates
I can confirm that debug package 'mesa' is stil not available
# repoquery -q --enablerepo='*debug*' mesa-debuginfo.x86_64 mesa-debuginfo-0:7.9-5.fc14.x86_64 There is no base package `mesa' but the debuginfo package name is derived from the base name. use: debuginfo-install mesa-dri-drivers.x86_64 It will install mesa-debuginfo because: # rpm -q --qf '%{sourcerpm}\n' mesa-dri-drivers.x86_64 mesa-7.9-5.fc14.src.rpm You could also enable to right `debug' repositories and # yum install mesa-debuginfo
updated system via yum with all packages as of today (Apr.2nd, 2011), I don't have crash on adding molecule. System is x86_64. Rotation also works. So my guess crash has been fixed.